Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_co8456951.1

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 1675

Gene Structure 1674 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_co8456951.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

atgctcaaagaattctgtatttacattgagccagaacaacagatgctgaacatcacattcactcccagcaaagatggatatgcttttatcaacgggattgaaattatgtccatgcctgcctatctttaccacactgcagcccaagacgatgggccaagtattatcggcaacgaaaaccggaacgtcccagtgaaaaaccacacggctatggagatgatctatcgaatcaacgtcggcggaagtccagtctcaccgaatgaagacacgggcatgtaccgcacctgggattcaacggacgagatctacttaaataatccaagtagaactttgagcatattatcacaaagcaataatactcatctcaaatttgcaaaaataccgaactacactgcgccggtagacgtttaccgaaccggccggtcaatggaggtgaacagaaccatcagcaagagctacaatctcacctgggggtttcctgtagatccacaattttattacctggtgaggctccatttttgtgagattatttttagattggagagagatcgtgtgtttcagatttttatagccgaccaaccagcggaacagagagcggacataatccaatggagtggaggaaatgggattcccgtatatagagactaccttgtgttcgtgcccagtcttccaaacaagaagaaagttgacatctctgttgcactacaagcaaatcaagacgattcgaaaactcgatataatgatgcaatcttgaatgggctcgaaatcttcaaactgaatgacacaagcggaaatctcgccggacccaatcccgaccaaccgccggcggccgacaagatgaagccggaaagccaaagaaacccgaagaagaagtcgattcctatgcttgctatcattgccggcgtagtttccgtcttacttgttccttccctattggggtttttagttttcaggcgtacaagaaaactcaaggactccggctccagccacaggatgacgaaatcaatcaccaacattgggtcacatatcccgtcttatttgtgtcggtactttgcactggcagagatcatagccgccaccaaaaacttcgatgacactttcatcgttgggattggtgggtttggccacgtgtacaaaggacaattcgatgatggggccacccttgttgcaatcaaaaggcttaaagccacttctgcgcagggggcccacgagttcatgacggaaatcaagatgctctctgaactgcgccatcgtcatttggtgtctctgattggatattgtgctgatcaaggtgagatgcttttagtgtacgattacatgtcacgagggacccttagtgatcatttgcaccacatcgagaaaccgcatcttccttgggaacgacgacttcggatttgtatcggtgcagctcaaggtttgcactaccttcatacaggttccaaaggcaccatcattcaccgtgacgtaaagagcacaaacatattattagacgagaaatgggtagccaaggtttcagattttgggttgtcaaaaatgggcaatatcacaatatctaaaacccacattagcacgaaggtgaagggtagtttcggatatgttgaccctgattattaccggcgtcaacaattgactgagaagtctgacgtgtactcatttggcgtagtgttatgcgaagta

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

558

Amino Acids

63.0

Weight (kDa)

8.81

Isoelectric Point (pI)

40.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1633
Acc16I	TGCGCA	1 cut(s)	1194
AccB1I	GGYRCC	1 cut(s)	1442
AccBSI	CCGCTC	1 cut(s)	593
AccI	GTMKAC	1 cut(s)	399
AciI	CCGC	9 cut(s)	237, 277, 581, 593, 786, 818, 824, 1071, 1361
AclWI	GGATC	1 cut(s)	476
AcoI	YGGCCR	3 cut(s)	415, 825, 1120
AcsI	RAATTY	2 cut(s)	11, 365
AcvI	CACGTG	1 cut(s)	1126
AcyI	GRCGYC	1 cut(s)	1615
AfaI	GTAC	6 cut(s)	275, 955, 1046, 1130, 1307, 1646
AfiI	CCNNNNNNNGG	7 cut(s)	283, 424, 580, 820, 933, 987, 1014
AflIII	ACRYGT	3 cut(s)	1125, 1314, 1641
AgsI	TTSAA	4 cut(s)	101, 291, 751, 769
AjiI	CACGTC	1 cut(s)	1642
AjnI	CCWGG	3 cut(s)	281, 464, 498
AleI	CACNNNNGTG	1 cut(s)	1571
AluBI	AGCT	2 cut(s)	453, 1406
AluI	AGCT	2 cut(s)	453, 1406
Alw21I	GWGCWC	1 cut(s)	1472
Alw26I	GTCTC	3 cut(s)	253, 633, 1266
AlwI	GGATC	1 cut(s)	476
AlwNI	CAGNNNCTG	1 cut(s)	46
AoxI	GGCC	6 cut(s)	152, 415, 825, 1120, 1152, 1200
ApaI	GGGCCC	1 cut(s)	1204
ApeKI	GCWGC	2 cut(s)	137, 1403
ApoI	RAATTY	2 cut(s)	11, 365
ArsI	GACNNNNNNTTYG	4 cut(s)	854, 886, 1374, 1406
AspLEI	GCGC	3 cut(s)	394, 1195, 1245
AspS9I	GGNCC	6 cut(s)	152, 800, 1152, 1200, 1201, 1326
AsuHPI	GGTGA	8 cut(s)	243, 442, 454, 514, 997, 1301, 1445, 1585
AsuII	TTCGAA	1 cut(s)	722
AvaII	GGWCC	2 cut(s)	800, 1326
BaeGI	GKGCMC	2 cut(s)	660, 1204
BalI	TGGCCA	1 cut(s)	1122
BanI	GGYRCC	1 cut(s)	1442
BanII	GRGCYC	2 cut(s)	759, 1204
BauI	CACGAG	2 cut(s)	1205, 1320
BbrPI	CACGTG	1 cut(s)	1126
BbsI	GAAGAC	2 cut(s)	267, 656
Bbv12I	GWGCWC	1 cut(s)	1472
BbvI	GCAGC	2 cut(s)	149, 1415
BccI	CCATC	6 cut(s)	68, 143, 449, 1142, 1254, 1454
BceAI	ACGGC	1 cut(s)	219
BcgI	CGANNNNNNTGC	2 cut(s)	862, 896
BciT130I	CCWGG	3 cut(s)	283, 466, 500
BclI	TGATCA	2 cut(s)	1282, 1336
BcoDI	GTCTC	3 cut(s)	253, 633, 1266
BfmI	CTRYAG	2 cut(s)	135, 477
BglII	AGATCT	1 cut(s)	300
BisI	GCNGC	4 cut(s)	138, 825, 1071, 1404
BlsI	GCNGC	4 cut(s)	139, 826, 1072, 1405
Bme1390I	CCNGG	3 cut(s)	283, 466, 500
Bme18I	GGWCC	2 cut(s)	800, 1326
BmgBI	CACGTC	1 cut(s)	1642
BmgT120I	GGNCC	6 cut(s)	152, 800, 1152, 1200, 1201, 1326
BmrFI	CCNGG	3 cut(s)	283, 466, 500
BmrI	ACTGGG	2 cut(s)	182, 654
BmsI	GCATC	5 cut(s)	33, 730, 1218, 1284, 1372
BmuI	ACTGGG	2 cut(s)	182, 654
BpiI	GAAGAC	2 cut(s)	267, 656
BpmI	CTGGAG	1 cut(s)	964
Bpu14I	TTCGAA	1 cut(s)	722
BpuEI	CTTGAG	2 cut(s)	950, 1392
BsaAI	YACGTR	1 cut(s)	1126
BsaBI	GATNNNNATC	1 cut(s)	1394
BsaHI	GRCGYC	1 cut(s)	1615
BsaJI	CCNNGG	4 cut(s)	282, 465, 1370, 1503
BsaWI	WCCGGW	1 cut(s)	177
BsaXI	ACNNNNNCTCC	4 cut(s)	46, 76, 962, 992
Bsc4I	CCNNNNNNNGG	7 cut(s)	283, 424, 580, 820, 933, 987, 1014
Bse118I	RCCGGY	6 cut(s)	394, 413, 417, 820, 896, 1611
Bse1I	ACTGG	4 cut(s)	188, 245, 660, 1059
Bse3DI	GCAATG	1 cut(s)	891
Bse8I	GATNNNNATC	1 cut(s)	1394
BseBI	CCWGG	3 cut(s)	283, 466, 500
BseDI	CCNNGG	4 cut(s)	282, 465, 1370, 1503
BseGI	GGATG	1 cut(s)	996
BseJI	GATNNNNATC	1 cut(s)	1394
BseLI	CCNNNNNNNGG	7 cut(s)	283, 424, 580, 820, 933, 987, 1014
BseMI	GCAATG	1 cut(s)	891
BseMII	CTCAG	1 cut(s)	1620
BseNI	ACTGG	4 cut(s)	188, 245, 660, 1059
BseSI	GKGCMC	2 cut(s)	660, 1204
BseX3I	CGGCCG	2 cut(s)	415, 825
BseXI	GCAGC	2 cut(s)	149, 1415
BseYI	CCCAGC	1 cut(s)	65
BsgI	GTGCAG	1 cut(s)	1422
Bsh1285I	CGRYCG	2 cut(s)	418, 828
BshFI	GGCC	6 cut(s)	154, 417, 827, 1122, 1154, 1202
BshNI	GGYRCC	1 cut(s)	1442
BsiEI	CGRYCG	2 cut(s)	418, 828
BsiHKAI	GWGCWC	1 cut(s)	1472
BslFI	GGGAC	2 cut(s)	170, 1339
BslI	CCNNNNNNNGG	7 cut(s)	283, 424, 580, 820, 933, 987, 1014
BsmAI	GTCTC	3 cut(s)	253, 633, 1266
BsmFI	GGGAC	2 cut(s)	170, 1339
BsnI	GGCC	6 cut(s)	154, 417, 827, 1122, 1154, 1202
Bsp119I	TTCGAA	1 cut(s)	722
Bsp120I	GGGCCC	1 cut(s)	1200
Bsp1286I	GDGCHC	4 cut(s)	660, 759, 1204, 1472
Bsp1407I	TGTACA	1 cut(s)	1128
Bsp143I	GATC	7 cut(s)	216, 300, 481, 544, 1062, 1282, 1336
BspACI	CCGC	9 cut(s)	237, 277, 581, 593, 786, 818, 824, 1071, 1361
BspANI	GGCC	6 cut(s)	154, 417, 827, 1122, 1154, 1202
BspCNI	CTCAG	1 cut(s)	1621
BspHI	TCATGA	1 cut(s)	1212
BspMAI	CTGCAG	1 cut(s)	139
BspPI	GGATC	1 cut(s)	476
BspT104I	TTCGAA	1 cut(s)	722
BspT107I	GGYRCC	1 cut(s)	1442
BsrBI	CCGCTC	1 cut(s)	593
BsrDI	GCAATG	1 cut(s)	891
BsrFI	RCCGGY	6 cut(s)	394, 413, 417, 820, 896, 1611
BsrGI	TGTACA	1 cut(s)	1128
BsrI	ACTGG	4 cut(s)	188, 245, 660, 1059
BssAI	RCCGGY	6 cut(s)	394, 413, 417, 820, 896, 1611
BssECI	CCNNGG	4 cut(s)	282, 465, 1370, 1503
BssMI	GATC	7 cut(s)	216, 300, 481, 544, 1062, 1282, 1336
BssNI	GRCGYC	1 cut(s)	1615
BssSI	CACGAG	2 cut(s)	1205, 1320
BssT1I	CCWWGG	2 cut(s)	1370, 1503
Bst2BI	CACGAG	2 cut(s)	1205, 1320
Bst2UI	CCWGG	3 cut(s)	283, 466, 500
Bst4CI	ACNGT	1 cut(s)	1457
BstACI	GRCGYC	1 cut(s)	1615
BstAUI	TGTACA	1 cut(s)	1128
BstBAI	YACGTR	1 cut(s)	1126
BstBI	TTCGAA	1 cut(s)	722
BstC8I	GCNNGC	4 cut(s)	117, 822, 885, 898
BstDEI	CTNAG	2 cut(s)	1331, 1629
BstF5I	GGATG	1 cut(s)	996
BstHHI	GCGC	3 cut(s)	394, 1195, 1245
BstKTI	GATC	7 cut(s)	219, 303, 484, 547, 1065, 1285, 1339
BstMAI	GTCTC	3 cut(s)	253, 633, 1266
BstMBI	GATC	7 cut(s)	216, 300, 481, 544, 1062, 1282, 1336
BstMCI	CGRYCG	2 cut(s)	418, 828
BstMWI	GCNNNNNNNGC	5 cut(s)	276, 704, 893, 1190, 1199
BstNI	CCWGG	3 cut(s)	283, 466, 500
BstNSI	RCATGY	2 cut(s)	274, 1318
BstSCI	CCNGG	3 cut(s)	281, 464, 498
BstSFI	CTRYAG	2 cut(s)	135, 477
BstSLI	GKGCMC	2 cut(s)	660, 1204
BstV1I	GCAGC	2 cut(s)	149, 1415
BstV2I	GAAGAC	2 cut(s)	267, 656
BstX2I	RGATCY	2 cut(s)	300, 481
BstXI	CCANNNNNNTGG	2 cut(s)	149, 611
BstYI	RGATCY	2 cut(s)	300, 481
BstZI	CGGCCG	2 cut(s)	415, 825
BsuRI	GGCC	6 cut(s)	154, 417, 827, 1122, 1154, 1202
BtrI	CACGTC	1 cut(s)	1642
BtsCI	GGATG	1 cut(s)	996
BtsI	GCAGTG	2 cut(s)	132, 387
BtsIMutI	CAGTG	4 cut(s)	132, 195, 387, 1052
Cac8I	GCNNGC	4 cut(s)	117, 822, 885, 898
CaiI	CAGNNNCTG	1 cut(s)	46
CciI	TCATGA	1 cut(s)	1212
CfoI	GCGC	3 cut(s)	394, 1195, 1245
Cfr10I	RCCGGY	6 cut(s)	394, 413, 417, 820, 896, 1611
Cfr13I	GGNCC	6 cut(s)	152, 800, 1152, 1200, 1201, 1326
CseI	GACGC	1 cut(s)	1604
CsiI	ACCWGGT	1 cut(s)	498
Csp6I	GTAC	6 cut(s)	274, 954, 1045, 1129, 1306, 1645
CspCI	CAANNNNNGTGG	2 cut(s)	1144, 1179
CviAII	CATG	4 cut(s)	112, 271, 1213, 1315
CviQI	GTAC	6 cut(s)	274, 954, 1045, 1129, 1306, 1645
DdeI	CTNAG	2 cut(s)	1331, 1629
DpnI	GATC	7 cut(s)	218, 302, 483, 546, 1064, 1284, 1338
DpnII	GATC	7 cut(s)	216, 300, 481, 544, 1062, 1282, 1336
DrdI	GACNNNNNNGTC	1 cut(s)	1633
DseDI	GACNNNNNNGTC	1 cut(s)	1633
EaeI	YGGCCR	3 cut(s)	415, 825, 1120
EagI	CGGCCG	2 cut(s)	415, 825
EciI	GGCGGA	1 cut(s)	252
EclXI	CGGCCG	2 cut(s)	415, 825
Eco130I	CCWWGG	2 cut(s)	1370, 1503
Eco24I	GRGCYC	2 cut(s)	759, 1204
Eco47I	GGWCC	2 cut(s)	800, 1326
Eco52I	CGGCCG	2 cut(s)	415, 825
Eco72I	CACGTG	1 cut(s)	1126
EcoO109I	RGGNCCY	2 cut(s)	1200, 1326
EcoRI	GAATTC	1 cut(s)	11
EcoRII	CCWGG	3 cut(s)	281, 464, 498
EcoT14I	CCWWGG	2 cut(s)	1370, 1503
EcoT38I	GRGCYC	2 cut(s)	759, 1204
ErhI	CCWWGG	2 cut(s)	1370, 1503
FaeI	CATG	4 cut(s)	115, 274, 1216, 1318
FalI	AAGNNNNNCTT	2 cut(s)	310, 342
FaqI	GGGAC	2 cut(s)	170, 1339
FatI	CATG	4 cut(s)	111, 270, 1212, 1314
FbaI	TGATCA	2 cut(s)	1282, 1336
FblI	GTMKAC	1 cut(s)	399
Fnu4HI	GCNGC	4 cut(s)	138, 825, 1071, 1404
FokI	GGATG	1 cut(s)	1003
FriOI	GRGCYC	2 cut(s)	759, 1204
Fsp4HI	GCNGC	4 cut(s)	138, 825, 1071, 1404
FspI	TGCGCA	1 cut(s)	1194
GlaI	GCGC	3 cut(s)	393, 1194, 1244
GluI	GCNGC	4 cut(s)	138, 825, 1071, 1404
GsaI	CCCAGC	1 cut(s)	69
GsuI	CTGGAG	1 cut(s)	964
HaeIII	GGCC	6 cut(s)	154, 417, 827, 1122, 1154, 1202
HgaI	GACGC	1 cut(s)	1604
HhaI	GCGC	3 cut(s)	394, 1195, 1245
Hin1I	GRCGYC	1 cut(s)	1615
Hin1II	CATG	4 cut(s)	115, 274, 1216, 1318
Hin6I	GCGC	3 cut(s)	392, 1193, 1243
HinP1I	GCGC	3 cut(s)	392, 1193, 1243
HincII	GTYRAC	3 cut(s)	685, 1597, 1619
HindII	GTYRAC	3 cut(s)	685, 1597, 1619
HinfI	GANTC	6 cut(s)	225, 287, 625, 719, 874, 971
HphI	GGTGA	8 cut(s)	243, 442, 454, 514, 997, 1301, 1445, 1585
Hpy166II	GTNNAC	9 cut(s)	400, 406, 433, 685, 1129, 1306, 1597, 1619, 1645
Hpy188I	TCNGA	7 cut(s)	558, 1237, 1266, 1389, 1513, 1589, 1639
Hpy188III	TCNNGA	7 cut(s)	713, 748, 809, 1213, 1225, 1320, 1354
Hpy8I	GTNNAC	9 cut(s)	400, 406, 433, 685, 1129, 1306, 1597, 1619, 1645
Hpy99I	CGWCG	2 cut(s)	236, 1383
HpyAV	CCTTC	4 cut(s)	933, 1433, 1564, 1570
HpyCH4III	ACNGT	1 cut(s)	1457
HpyCH4IV	ACGT	6 cut(s)	183, 231, 402, 1125, 1461, 1641
HpyCH4V	TGCA	9 cut(s)	137, 371, 698, 743, 1052, 1166, 1345, 1403, 1417
HpyF10VI	GCNNNNNNNGC	5 cut(s)	276, 704, 893, 1190, 1199
HpyF3I	CTNAG	2 cut(s)	1331, 1629
HpySE526I	ACGT	6 cut(s)	183, 231, 402, 1125, 1461, 1641
Hsp92I	GRCGYC	1 cut(s)	1615
Hsp92II	CATG	4 cut(s)	115, 274, 1216, 1318
HspAI	GCGC	3 cut(s)	392, 1193, 1243
KflI	GGGWCCC	1 cut(s)	1326
KroI	GCCGGC	2 cut(s)	820, 896
KroNI	GCCGGC	2 cut(s)	822, 898
Ksp22I	TGATCA	2 cut(s)	1282, 1336
Kzo9I	GATC	7 cut(s)	216, 300, 481, 544, 1062, 1282, 1336
LmnI	GCTCC	2 cut(s)	513, 983
Lsp1109I	GCAGC	2 cut(s)	149, 1415
LweI	GCATC	5 cut(s)	33, 730, 1218, 1284, 1372
MabI	ACCWGGT	1 cut(s)	498
MaeII	ACGT	6 cut(s)	183, 231, 402, 1125, 1461, 1641
MaeIII	GTNAC	3 cut(s)	1017, 1317, 1457
MalI	GATC	7 cut(s)	218, 302, 483, 546, 1064, 1284, 1338
MbiI	CCGCTC	1 cut(s)	593
MboI	GATC	7 cut(s)	216, 300, 481, 544, 1062, 1282, 1336
MboII	GAAGA	7 cut(s)	272, 656, 688, 757, 874, 877, 1358
MfeI	CAATTG	1 cut(s)	1622
MflI	RGATCY	2 cut(s)	300, 481
MhlI	GDGCHC	4 cut(s)	660, 759, 1204, 1472
MlsI	TGGCCA	1 cut(s)	1122
MluCI	AATT	6 cut(s)	11, 102, 365, 488, 1139, 1622
MluNI	TGGCCA	1 cut(s)	1122
MlyI	GAGTC	1 cut(s)	965
MnlI	CCTC	4 cut(s)	421, 498, 608, 1316
Mox20I	TGGCCA	1 cut(s)	1122
MreI	CGCCGGCG	1 cut(s)	820
MroNI	GCCGGC	2 cut(s)	820, 896
MscI	TGGCCA	1 cut(s)	1122
MseI	TTAA	2 cut(s)	308, 1179
MslI	CAYNNNNRTG	4 cut(s)	206, 269, 516, 1571
Msp20I	TGGCCA	1 cut(s)	1122
MspA1I	CMGCKG	1 cut(s)	581
MspR9I	CCNGG	3 cut(s)	283, 466, 500
MunI	CAATTG	1 cut(s)	1622
MvaI	CCWGG	3 cut(s)	283, 466, 500
MwoI	GCNNNNNNNGC	5 cut(s)	276, 704, 893, 1190, 1199
NaeI	GCCGGC	2 cut(s)	822, 898
NdeII	GATC	7 cut(s)	216, 300, 481, 544, 1062, 1282, 1336
NgoMIV	GCCGGC	2 cut(s)	820, 896
NlaIII	CATG	4 cut(s)	115, 274, 1216, 1318
NmuCI	GTSAC	3 cut(s)	1017, 1317, 1457
NsbI	TGCGCA	1 cut(s)	1194
NspI	RCATGY	2 cut(s)	274, 1318
NspV	TTCGAA	1 cut(s)	722
OliI	CACNNNNGTG	1 cut(s)	1571
PagI	TCATGA	1 cut(s)	1212
PciI	ACATGT	1 cut(s)	1314
PdiI	GCCGGC	2 cut(s)	822, 898
PfeI	GAWTC	5 cut(s)	225, 287, 625, 719, 874
PkrI	GCNGC	4 cut(s)	139, 826, 1072, 1405
PleI	GAGTC	1 cut(s)	965
PmaCI	CACGTG	1 cut(s)	1126
PmlI	CACGTG	1 cut(s)	1126
PpsI	GAGTC	1 cut(s)	965
Ppu21I	YACGTR	1 cut(s)	1126
PpuMI	RGGWCCY	1 cut(s)	1326
PscI	ACATGT	1 cut(s)	1314
Psp5II	RGGWCCY	1 cut(s)	1326
Psp6I	CCWGG	3 cut(s)	281, 464, 498
PspCI	CACGTG	1 cut(s)	1126
PspFI	CCCAGC	1 cut(s)	65
PspGI	CCWGG	3 cut(s)	281, 464, 498
PspOMI	GGGCCC	1 cut(s)	1200
PspPI	GGNCC	6 cut(s)	152, 800, 1152, 1200, 1201, 1326
PspPPI	RGGWCCY	1 cut(s)	1326
PstI	CTGCAG	1 cut(s)	139
PstNI	CAGNNNCTG	1 cut(s)	46
PsuI	RGATCY	2 cut(s)	300, 481
RsaI	GTAC	6 cut(s)	275, 955, 1046, 1130, 1307, 1646
RsaNI	GTAC	6 cut(s)	274, 954, 1045, 1129, 1306, 1645
RseI	CAYNNNNRTG	4 cut(s)	206, 269, 516, 1571
SaqAI	TTAA	2 cut(s)	308, 1179
SatI	GCNGC	4 cut(s)	138, 825, 1071, 1404
Sau3AI	GATC	7 cut(s)	216, 300, 481, 544, 1062, 1282, 1336
Sau96I	GGNCC	6 cut(s)	152, 800, 1152, 1200, 1201, 1326
SchI	GAGTC	1 cut(s)	965
ScrFI	CCNGG	3 cut(s)	283, 466, 500
SduI	GDGCHC	4 cut(s)	660, 759, 1204, 1472
SexAI	ACCWGGT	1 cut(s)	498
SfaNI	GCATC	5 cut(s)	33, 730, 1218, 1284, 1372
SfcI	CTRYAG	2 cut(s)	135, 477
SfuI	TTCGAA	1 cut(s)	722
SgrAI	CRCCGGYG	1 cut(s)	820
SinI	GGWCC	2 cut(s)	800, 1326
SmiMI	CAYNNNNRTG	4 cut(s)	206, 269, 516, 1571
SmlI	CTYRAG	2 cut(s)	965, 1407
SmoI	CTYRAG	2 cut(s)	965, 1407
Sse9I	AATT	6 cut(s)	11, 102, 365, 488, 1139, 1622
SsiI	CCGC	9 cut(s)	237, 277, 581, 593, 786, 818, 824, 1071, 1361
StyD4I	CCNGG	3 cut(s)	281, 464, 498
StyI	CCWWGG	2 cut(s)	1370, 1503
TaaI	ACNGT	1 cut(s)	1457
TaiI	ACGT	6 cut(s)	186, 234, 405, 1128, 1464, 1644
TaqI	TCGA	8 cut(s)	223, 722, 730, 759, 872, 1086, 1143, 1353
TasI	AATT	6 cut(s)	11, 102, 365, 488, 1139, 1622
TatI	WGTACW	2 cut(s)	1128, 1644
TauI	GCSGC	2 cut(s)	827, 1073
TfiI	GAWTC	5 cut(s)	225, 287, 625, 719, 874
Tru1I	TTAA	2 cut(s)	308, 1179
Tru9I	TTAA	2 cut(s)	308, 1179
TscAI	CASTG	4 cut(s)	139, 195, 394, 1059
TseFI	GTSAC	3 cut(s)	1017, 1317, 1457
TseI	GCWGC	2 cut(s)	137, 1403
Tsp45I	GTSAC	3 cut(s)	1017, 1317, 1457
TspDTI	ATGAA	5 cut(s)	273, 851, 1087, 1201, 1415
TspGWI	ACGGA	3 cut(s)	308, 898, 1232
TspRI	CASTG	4 cut(s)	139, 195, 394, 1059
VpaK11BI	GGWCC	2 cut(s)	800, 1326
XapI	RAATTY	2 cut(s)	11, 365
XceI	RCATGY	2 cut(s)	274, 1318
XmiI	GTMKAC	1 cut(s)	399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.