Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

5182329 .. 5184899

Gene Structure 2571 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1063600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2571 bp

ATGAAACCCAATCTTGCTTATCTGTTCCTTACCCTGTTTCTGCAAATCATAACCTTACACGTCGCCGGAGACTCACCCTCTGTCTACAAACCGGTCGATGACATCACCCTACAGTGCGGCTTTTCCGGCGACCAAGTCAACCAACAGGACGAACGAACTTGGAGTGGCGATATCAACTCAAAATTATCCCCCTTCCAAGCAGCTGGCAGCTCATTCGTATTCAAAGCAGCAACCCCGATCTCCTCCTCCAGCCAAGTGCCTTACACCACAGCTCGGCTCTCTCGCTCCAAATTTACGTACACATTTCCACTCACCAGCGGCCAAAAGTTCATCCGCTTGTACTTCTACCCCACTTCCTACGCCGCCGAGTTCGACCGATTAAAATCCCTCTTCTCAGTCGAAGCCCGCGGCTTTACCCTACTCCGCGACTTCAACGCCTCCGTCACCGCCGACGCTTCCTGGTCGGAGACAGTATCCAGGGAGTTCTGTCTCAACATAGCATCCGAACAGAGCTTGAACATCACGTTCACTCCGAGCAGAGCAAGTCCAGATGCCTATGCCTTCATCAATGGAATCGAAATCGTGTCCATGCCCGACAATCTTTATTACAATCCGCCGCAAAGTGCAGATGGGGCTGTTTACGTAGGCAGCATAAACCCGTATTGGATCGAAAATAACACCGCCATGGAGATGGTCTACCGGATCAACGTCGGCGGATCTCAGCTTTCGTTCAATCAGGACACTGGAATGTACAGAAACTGGGATGGTATTCAAGAGGAGTACAACTATTTGGACGATTTGAGTAAAAATTTTAGTCGTCTACCGCAAAACAGTAGTATTCAGCTCGACTTTTCGAAAATTCCGAAGTACTCTGCTCCGGAAGAAGTTTACCGAACCGCTCGGTCGATGGGGAGGAACAAAACCATAAACAAGAGCTATAATCTCACCTGGGGGTTTCCGGTAGATTCTACGTTTTATTACTTTATTCGACTTCATTTTTGTGAGTTCGAAGGTGCTGTTACATTGCCCAGGGACCGGCTGTTTCAAATCTTCATCGCCAATCAGACGGCGGAGAAGATGGCGGATGTAATCTGGTGGAGCCAAGGTTATGGGAAGCCGGTGTACAAAGACTACGTCGTTTTCGTGCCTGCAGGCGCCGGAAGTAAAAAGAAAGTTCATCTCTTTCTTGCACTGCAAACCACCCCAAAAAATCCGTCGACGAATTACAACGATGCAATCTTGAATGGACTCGAGATCTTCAAGCTCAGTGATTCAAATAGGAATCTCGCCGGACCAAACCCCGACCCGCCTCCCCCGCCAAATATAGCTCAGCCGGAGAGCCCCAAAGTTTCAGACAAGAAATCTATTCCTCTGTTTGCCATCATCGCCGGTGTAGTTTCAGGTGTGTTTGTTTTAGCCTTTGTGTTCGGATTTTTGGTTTTCTGGAGAGGAAGAAAAGTCAAGGACTCAAGCTCCGAGCAAAGAACAAAATGGGGTCCATTTTCTTTTTCGACGACCAAGTCAACCAAGACTCGCGGCTCTTCTTTACCGTCCGATTTGTGTCGCTACTTTTCACTGGCGGAGATCAAAGCCGCCACCCAAAACTTTAGCCAAGGTTTCATTGTTGGTGTTGGCGGCTTTGGTCACGTGTACAAAGGGCATATCGATGGCGGGGCCACTCTCGTTGCCATCAAACGGCTGAAACCCGAGTCAAAGCAGGGAGCCTGCGAGTTCAAGACGGAAATCAAACTGCTCGCACAACTTAGACACCGCTATTTGGTGTCTCTCATTGGGTATTGTACTGATAGAAATGAGATGATTTTGGTGTACGATTACATGTCACATGGGACACTCGCCGACCATCTCTACCACACCGACAACCCACCTCTCTCTTGGGGACAACGGCTCCAAATTTGCATTGGCGCCGCGCGAGGGTTGCGCTACCTTCACAACGAAGCCAAGGGCACTATCATCCACCGTGACGTGAAGAGCACAAACATTTTATTGGATGAGAATTGGATGGCCAAGGTTTCAGATTTTGGATTGTCAAAAATGGGCACAATCACCATGTCTAAGACCCATATTAGCACGGCCGTGAAAGGCAGTTTCGGTTATCTAGACCCGGAATACTATCGACGTCAACAACTGACTGTGAAATCTGATGTGTACTCATTCGGTGTAGTGTTGTGTGAAGTACTGTGCTCGAGACCAGCTGTGGTGCATGCAGTGGAGACAAGGCAAATGAACTTGGCTAAATGGGCCAAGAGTTGCCATCGCGACGGGGAACTTGATCAAATCATTGATCCAAACATGAAGGGTAAGATTGAAACCGAGTGTTTGAACAAGTTTGTGGAAATTGCTATGAGTTGCATCAATGATAGTGGGATCGAACGACCGACAATGAACGATGTTGTGAAGGGGCTTGAGTTTGCATTGCAACTACATCAGAAGTATGGTGAAAGGAACAACGAGGATGCCTTCGCTAGTGTGCCAGGTTGCGCTACGAATGAATCCATTCAGTGCATATCCGGGACGATCTTCTCAGAAATCAACGATCCGATTGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

857

Amino Acids

95.86

Weight (kDa)

8.41

Isoelectric Point (pI)

41.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	37 - 421	9.4e-32	Malectin-like domain
Malectin	PF11721	232 - 380	2.3e-06	Malectin domain
Pkinase	PF00069	541 - 806	9.9e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	542 - 807	2.7e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1519
AatII	GACGTC	1 cut(s)	2140
AccB1I	GGYRCC	2 cut(s)	1154, 1922
AccBSI	CCGCTC	1 cut(s)	899
AccI	GTMKAC	4 cut(s)	84, 696, 820, 1217
AccII	CGCG	6 cut(s)	408, 426, 1536, 1928, 1930, 2277
AccIII	TCCGGA	1 cut(s)	877
AclWI	GGATC	6 cut(s)	674, 710, 724, 2297, 2393, 2549
AcoI	YGGCCR	3 cut(s)	319, 2022, 2091
AcsI	RAATTY	4 cut(s)	290, 808, 858, 1911
AcvI	CACGTG	1 cut(s)	1648
AcyI	GRCGYC	3 cut(s)	1155, 1923, 2137
AfiI	CCNNNNNNNGG	5 cut(s)	273, 1035, 1695, 1777, 1932
AflIII	ACRYGT	3 cut(s)	58, 1647, 1836
AgeI	ACCGGT	1 cut(s)	91
AjiI	CACGTC	2 cut(s)	61, 1984
AjnI	CCWGG	5 cut(s)	458, 476, 947, 1028, 2491
AleI	CACNNNNGTG	1 cut(s)	2093
Alw21I	GWGCWC	2 cut(s)	1994, 2204
Alw26I	GTCTC	6 cut(s)	63, 461, 494, 1788, 2200, 2225
AlwI	GGATC	6 cut(s)	674, 710, 724, 2297, 2393, 2549
AlwNI	CAGNNNCTG	1 cut(s)	759
Ama87I	CYCGRG	3 cut(s)	1250, 1706, 2203
Aor13HI	TCCGGA	1 cut(s)	877
AoxI	GGCC	5 cut(s)	319, 1674, 2022, 2091, 2259
ApeKI	GCWGC	4 cut(s)	200, 207, 227, 648
ApoI	RAATTY	4 cut(s)	290, 808, 858, 1911
ArsI	GACNNNNNNTTYG	6 cut(s)	981, 1013, 1119, 1151, 1199, 1231
AsiGI	ACCGGT	1 cut(s)	91
Asp700I	GAANNNNTTC	1 cut(s)	2514
AspLEI	GCGC	5 cut(s)	1157, 1925, 1930, 1941, 2501
AspS9I	GGNCC	5 cut(s)	1033, 1292, 1496, 1674, 2259
AsuC2I	CCSGG	2 cut(s)	2123, 2530
AsuHPI	GGTGA	7 cut(s)	66, 97, 304, 436, 937, 2056, 2468
AsuII	TTCGAA	2 cut(s)	854, 1008
AvaI	CYCGRG	3 cut(s)	1250, 1706, 2203
AvaII	GGWCC	3 cut(s)	1033, 1292, 1496
BaeGI	GKGCMC	2 cut(s)	1967, 2060
BalI	TGGCCA	1 cut(s)	2024
BanI	GGYRCC	2 cut(s)	1154, 1922
BanII	GRGCYC	1 cut(s)	1343
BarI	GAAGNNNNNNTAC	2 cut(s)	1106, 1138
BbrPI	CACGTG	1 cut(s)	1648
Bbv12I	GWGCWC	2 cut(s)	1994, 2204
BbvI	GCAGC	4 cut(s)	212, 219, 239, 660
BceAI	ACGGC	5 cut(s)	1083, 1712, 1919, 2078, 2106
BcgI	CGANNNNNNTGC	2 cut(s)	196, 230
BciT130I	CCWGG	5 cut(s)	460, 478, 949, 1030, 2493
BciVI	GTATCC	1 cut(s)	484
BclI	TGATCA	1 cut(s)	2290
BcnI	CCSGG	2 cut(s)	2123, 2530
BcoDI	GTCTC	6 cut(s)	63, 461, 494, 1788, 2200, 2225
BfaI	CTAG	2 cut(s)	2117, 2484
BfmI	CTRYAG	2 cut(s)	110, 1149
BfoI	RGCGCY	2 cut(s)	1158, 1926
BfuI	GTATCC	1 cut(s)	484
BglII	AGATCT	1 cut(s)	1254
BlpI	GCTNAGC	1 cut(s)	1329
BmcAI	AGTACT	2 cut(s)	869, 2196
Bme1390I	CCNGG	7 cut(s)	460, 478, 949, 1030, 2123, 2493, 2530
Bme18I	GGWCC	3 cut(s)	1033, 1292, 1496
BmeT110I	CYCGRG	3 cut(s)	1250, 1706, 2203
BmgBI	CACGTC	2 cut(s)	61, 1984
BmgT120I	GGNCC	5 cut(s)	1033, 1292, 1496, 1674, 2259
BmiI	GGNNCC	8 cut(s)	1034, 1100, 1156, 1497, 1675, 1723, 1907, 1924
BmrFI	CCNGG	7 cut(s)	460, 478, 949, 1030, 2123, 2493, 2530
BmrI	ACTGGG	1 cut(s)	769
BmsI	GCATC	5 cut(s)	509, 541, 1222, 2379, 2464
BmuI	ACTGGG	1 cut(s)	769
BpmI	CTGGAG	2 cut(s)	232, 1465
Bpu1102I	GCTNAGC	1 cut(s)	1329
Bpu14I	TTCGAA	2 cut(s)	854, 1008
BpuEI	CTTGAG	2 cut(s)	1453, 2444
BpuMI	CCSGG	2 cut(s)	2123, 2530
Bsa29I	ATCGAT	1 cut(s)	1665
BsaAI	YACGTR	3 cut(s)	297, 643, 1648
BsaBI	GATNNNNATC	1 cut(s)	382
BsaHI	GRCGYC	3 cut(s)	1155, 1923, 2137
BsaI	GGTCTC	1 cut(s)	2200
BsaWI	WCCGGW	4 cut(s)	91, 699, 877, 958
BsaXI	ACNNNNNCTCC	8 cut(s)	514, 544, 1090, 1120, 1457, 1487, 1890, 1920
Bsc4I	CCNNNNNNNGG	5 cut(s)	273, 1035, 1695, 1777, 1932
Bse118I	RCCGGY	4 cut(s)	91, 1035, 1117, 1388
Bse1I	ACTGG	3 cut(s)	748, 764, 1581
Bse3DI	GCAATG	2 cut(s)	1022, 2432
Bse8I	GATNNNNATC	1 cut(s)	382
BseAI	TCCGGA	1 cut(s)	877
BseBI	CCWGG	5 cut(s)	460, 478, 949, 1030, 2493
BseCI	ATCGAT	1 cut(s)	1665
BseGI	GGATG	8 cut(s)	330, 500, 769, 1090, 1971, 2014, 2025, 2479
BseJI	GATNNNNATC	1 cut(s)	382
BseLI	CCNNNNNNNGG	5 cut(s)	273, 1035, 1695, 1777, 1932
BseMI	GCAATG	2 cut(s)	1022, 2432
BseMII	CTCAG	5 cut(s)	408, 734, 1279, 1343, 2556
BseNI	ACTGG	3 cut(s)	748, 764, 1581
BseRI	GAGGAG	3 cut(s)	232, 235, 791
BseSI	GKGCMC	2 cut(s)	1967, 2060
BseX3I	CGGCCG	1 cut(s)	2091
BseXI	GCAGC	4 cut(s)	212, 219, 239, 660
BsgI	GTGCAG	1 cut(s)	645
Bsh1236I	CGCG	6 cut(s)	408, 426, 1536, 1928, 1930, 2277
Bsh1285I	CGRYCG	5 cut(s)	96, 376, 905, 2094, 2396
BshFI	GGCC	5 cut(s)	321, 1676, 2024, 2093, 2261
BshNI	GGYRCC	2 cut(s)	1154, 1922
BshTI	ACCGGT	1 cut(s)	91
BshVI	ATCGAT	1 cut(s)	1665
BsiEI	CGRYCG	5 cut(s)	96, 376, 905, 2094, 2396
BsiHKAI	GWGCWC	2 cut(s)	1994, 2204
BsiHKCI	CYCGRG	3 cut(s)	1250, 1706, 2203
BslFI	GGGAC	4 cut(s)	1046, 1861, 1911, 2545
BslI	CCNNNNNNNGG	5 cut(s)	273, 1035, 1695, 1777, 1932
BsmAI	GTCTC	6 cut(s)	63, 461, 494, 1788, 2200, 2225
BsmFI	GGGAC	4 cut(s)	1046, 1861, 1911, 2545
BsnI	GGCC	5 cut(s)	321, 1676, 2024, 2093, 2261
Bso31I	GGTCTC	1 cut(s)	2200
BsoBI	CYCGRG	3 cut(s)	1250, 1706, 2203
Bsp119I	TTCGAA	2 cut(s)	854, 1008
Bsp1286I	GDGCHC	5 cut(s)	1343, 1967, 1994, 2060, 2204
Bsp13I	TCCGGA	1 cut(s)	877
Bsp1407I	TGTACA	3 cut(s)	750, 1122, 1650
Bsp1720I	GCTNAGC	1 cut(s)	1329
Bsp19I	CCATGG	1 cut(s)	684
Bsp68I	TCGCGA	1 cut(s)	2277
BspANI	GGCC	5 cut(s)	321, 1676, 2024, 2093, 2261
BspCNI	CTCAG	5 cut(s)	407, 733, 1278, 1342, 2555
BspDI	ATCGAT	1 cut(s)	1665
BspEI	TCCGGA	1 cut(s)	877
BspFNI	CGCG	6 cut(s)	408, 426, 1536, 1928, 1930, 2277
BspLI	GGNNCC	8 cut(s)	1034, 1100, 1156, 1497, 1675, 1723, 1907, 1924
BspMAI	CTGCAG	1 cut(s)	1153
BspPI	GGATC	6 cut(s)	674, 710, 724, 2297, 2393, 2549
BspQI	GCTCTTC	2 cut(s)	1546, 1982
BspT104I	TTCGAA	2 cut(s)	854, 1008
BspT107I	GGYRCC	2 cut(s)	1154, 1922
BspTNI	GGTCTC	1 cut(s)	2200
BsrBI	CCGCTC	1 cut(s)	899
BsrDI	GCAATG	2 cut(s)	1022, 2432
BsrFI	RCCGGY	4 cut(s)	91, 1035, 1117, 1388
BsrGI	TGTACA	3 cut(s)	750, 1122, 1650
BsrI	ACTGG	3 cut(s)	748, 764, 1581
BssAI	RCCGGY	4 cut(s)	91, 1035, 1117, 1388
BssNI	GRCGYC	3 cut(s)	1155, 1923, 2137
BssT1I	CCWWGG	5 cut(s)	684, 1102, 1612, 1959, 2025
Bst2UI	CCWGG	5 cut(s)	460, 478, 949, 1030, 2493
Bst4CI	ACNGT	7 cut(s)	114, 472, 833, 1551, 1979, 2152, 2199
Bst6I	CTCTTC	3 cut(s)	395, 1546, 1982
BstACI	GRCGYC	3 cut(s)	1155, 1923, 2137
BstAUI	TGTACA	3 cut(s)	750, 1122, 1650
BstBAI	YACGTR	3 cut(s)	297, 643, 1648
BstBI	TTCGAA	2 cut(s)	854, 1008
BstC8I	GCNNGC	7 cut(s)	205, 406, 1149, 1153, 1726, 1755, 2223
BstDEI	CTNAG	7 cut(s)	394, 720, 1265, 1329, 1763, 2073, 2542
BstDSI	CCRYGG	2 cut(s)	406, 684
BstF5I	GGATG	8 cut(s)	330, 500, 769, 1090, 1971, 2014, 2025, 2479
BstFNI	CGCG	6 cut(s)	408, 426, 1536, 1928, 1930, 2277
BstH2I	RGCGCY	2 cut(s)	1158, 1926
BstHHI	GCGC	5 cut(s)	1157, 1925, 1930, 1941, 2501
BstMAI	GTCTC	6 cut(s)	63, 461, 494, 1788, 2200, 2225
BstMCI	CGRYCG	5 cut(s)	96, 376, 905, 2094, 2396
BstMWI	GCNNNNNNNGC	6 cut(s)	126, 632, 1315, 1385, 1936, 2258
BstNI	CCWGG	5 cut(s)	460, 478, 949, 1030, 2493
BstNSI	RCATGY	2 cut(s)	1840, 2225
BstSCI	CCNGG	7 cut(s)	458, 476, 947, 1028, 2121, 2491, 2528
BstSFI	CTRYAG	2 cut(s)	110, 1149
BstSLI	GKGCMC	2 cut(s)	1967, 2060
BstSNI	TACGTA	2 cut(s)	297, 643
BstUI	CGCG	6 cut(s)	408, 426, 1536, 1928, 1930, 2277
BstV1I	GCAGC	4 cut(s)	212, 219, 239, 660
BstX2I	RGATCY	2 cut(s)	716, 1254
BstXI	CCANNNNNNTGG	3 cut(s)	203, 691, 1109
BstYI	RGATCY	2 cut(s)	716, 1254
BstZI	CGGCCG	1 cut(s)	2091
Bsu15I	ATCGAT	1 cut(s)	1665
BsuI	GTATCC	1 cut(s)	484
BsuRI	GGCC	5 cut(s)	321, 1676, 2024, 2093, 2261
BsuTUI	ATCGAT	1 cut(s)	1665
BtgI	CCRYGG	2 cut(s)	406, 684
BtgZI	GCGATG	3 cut(s)	1039, 1369, 2258
BtrI	CACGTC	2 cut(s)	61, 1984
BtsCI	GGATG	8 cut(s)	330, 500, 769, 1090, 1971, 2014, 2025, 2479
BtsI	GCAGTG	2 cut(s)	1190, 2232
BtsIMutI	CAGTG	7 cut(s)	119, 741, 1190, 1273, 1574, 2232, 2525
BtuMI	TCGCGA	1 cut(s)	2277
Cac8I	GCNNGC	7 cut(s)	205, 406, 1149, 1153, 1726, 1755, 2223
CaiI	CAGNNNCTG	1 cut(s)	759
CfoI	GCGC	5 cut(s)	1157, 1925, 1930, 1941, 2501
Cfr10I	RCCGGY	4 cut(s)	91, 1035, 1117, 1388
Cfr13I	GGNCC	5 cut(s)	1033, 1292, 1496, 1674, 2259
Cfr42I	CCGCGG	1 cut(s)	409
ClaI	ATCGAT	1 cut(s)	1665
CseI	GACGC	1 cut(s)	461
CspAI	ACCGGT	1 cut(s)	91
CspCI	CAANNNNNGTGG	4 cut(s)	1666, 1701, 2362, 2397
CviAII	CATG	7 cut(s)	589, 685, 1837, 1844, 2068, 2222, 2311
DdeI	CTNAG	7 cut(s)	394, 720, 1265, 1329, 1763, 2073, 2542
DinI	GGCGCC	2 cut(s)	1156, 1924
DrdI	GACNNNNNNGTC	1 cut(s)	1519
DseDI	GACNNNNNNGTC	1 cut(s)	1519
EaeI	YGGCCR	3 cut(s)	319, 2022, 2091
EagI	CGGCCG	1 cut(s)	2091
Eam1104I	CTCTTC	3 cut(s)	395, 1546, 1982
EarI	CTCTTC	3 cut(s)	395, 1546, 1982
EciI	GGCGGA	5 cut(s)	603, 729, 1085, 1097, 1595
EclXI	CGGCCG	1 cut(s)	2091
Eco105I	TACGTA	2 cut(s)	297, 643
Eco130I	CCWWGG	5 cut(s)	684, 1102, 1612, 1959, 2025
Eco24I	GRGCYC	1 cut(s)	1343
Eco31I	GGTCTC	1 cut(s)	2200
Eco32I	GATATC	1 cut(s)	172
Eco47I	GGWCC	3 cut(s)	1033, 1292, 1496
Eco52I	CGGCCG	1 cut(s)	2091
Eco72I	CACGTG	1 cut(s)	1648
Eco88I	CYCGRG	3 cut(s)	1250, 1706, 2203
EcoRII	CCWGG	5 cut(s)	458, 476, 947, 1028, 2491
EcoRV	GATATC	1 cut(s)	172
EcoT14I	CCWWGG	5 cut(s)	684, 1102, 1612, 1959, 2025
EcoT38I	GRGCYC	1 cut(s)	1343
EgeI	GGCGCC	2 cut(s)	1156, 1924
EheI	GGCGCC	2 cut(s)	1156, 1924
ErhI	CCWWGG	5 cut(s)	684, 1102, 1612, 1959, 2025
FaeI	CATG	7 cut(s)	592, 688, 1840, 1847, 2071, 2225, 2314
FaqI	GGGAC	4 cut(s)	1046, 1861, 1911, 2545
FatI	CATG	7 cut(s)	588, 684, 1836, 1843, 2067, 2221, 2310
FauI	CCCGC	4 cut(s)	413, 1314, 1323, 1664
FbaI	TGATCA	1 cut(s)	2290
FblI	GTMKAC	4 cut(s)	84, 696, 820, 1217
FokI	GGATG	8 cut(s)	317, 487, 776, 1097, 1958, 2021, 2032, 2486
FriOI	GRGCYC	1 cut(s)	1343
FspBI	CTAG	2 cut(s)	2117, 2484
GlaI	GCGC	5 cut(s)	1156, 1924, 1929, 1940, 2500
GsuI	CTGGAG	2 cut(s)	232, 1465
HaeII	RGCGCY	2 cut(s)	1158, 1926
HaeIII	GGCC	5 cut(s)	321, 1676, 2024, 2093, 2261
HgaI	GACGC	1 cut(s)	461
HhaI	GCGC	5 cut(s)	1157, 1925, 1930, 1941, 2501
Hin1I	GRCGYC	3 cut(s)	1155, 1923, 2137
Hin1II	CATG	7 cut(s)	592, 688, 1840, 1847, 2071, 2225, 2314
Hin6I	GCGC	5 cut(s)	1155, 1923, 1928, 1939, 2499
HinP1I	GCGC	5 cut(s)	1155, 1923, 1928, 1939, 2499
HincII	GTYRAC	4 cut(s)	139, 1218, 1524, 2141
HindII	GTYRAC	4 cut(s)	139, 1218, 1524, 2141
HphI	GGTGA	7 cut(s)	66, 97, 304, 436, 937, 2056, 2468
Hpy99I	CGWCG	9 cut(s)	65, 455, 713, 1139, 1219, 1222, 1516, 2139, 2282
HpyAV	CCTTC	7 cut(s)	202, 571, 1004, 1955, 2308, 2410, 2488
HpyCH4III	ACNGT	7 cut(s)	114, 472, 833, 1551, 1979, 2152, 2199
HpyF10VI	GCNNNNNNNGC	6 cut(s)	126, 632, 1315, 1385, 1936, 2258
HpyF3I	CTNAG	7 cut(s)	394, 720, 1265, 1329, 1763, 2073, 2542
Hsp92I	GRCGYC	3 cut(s)	1155, 1923, 2137
Hsp92II	CATG	7 cut(s)	592, 688, 1840, 1847, 2071, 2225, 2314
HspAI	GCGC	5 cut(s)	1155, 1923, 1928, 1939, 2499
KasI	GGCGCC	2 cut(s)	1154, 1922
Kpn2I	TCCGGA	1 cut(s)	877
Ksp22I	TGATCA	1 cut(s)	2290
KspI	CCGCGG	1 cut(s)	409
LguI	GCTCTTC	2 cut(s)	1546, 1982
LmnI	GCTCC	6 cut(s)	290, 880, 1098, 1478, 1721, 1911
Lsp1109I	GCAGC	4 cut(s)	212, 219, 239, 660
LweI	GCATC	5 cut(s)	509, 541, 1222, 2379, 2464
MaeI	CTAG	2 cut(s)	2117, 2484
MaeIII	GTNAC	5 cut(s)	442, 1018, 1643, 1839, 1979
MbiI	CCGCTC	1 cut(s)	899
MboII	GAAGA	9 cut(s)	382, 893, 1042, 1087, 1249, 1464, 1533, 1999, 2530
MflI	RGATCY	2 cut(s)	716, 1254
MhlI	GDGCHC	5 cut(s)	1343, 1967, 1994, 2060, 2204
MlsI	TGGCCA	1 cut(s)	2024
MluCI	AATT	8 cut(s)	182, 290, 808, 858, 1222, 1911, 2014, 2355
MluNI	TGGCCA	1 cut(s)	2024
Mly113I	GGCGCC	2 cut(s)	1155, 1923
MlyI	GAGTC	5 cut(s)	65, 1242, 1460, 1525, 1718
MmeI	TCCRAC	1 cut(s)	444
Mox20I	TGGCCA	1 cut(s)	2024
MroI	TCCGGA	1 cut(s)	877
MroXI	GAANNNNTTC	1 cut(s)	2514
MscI	TGGCCA	1 cut(s)	2024
MseI	TTAA	1 cut(s)	380
MslI	CAYNNNNRTG	6 cut(s)	683, 689, 746, 999, 1665, 2093
Msp20I	TGGCCA	1 cut(s)	2024
MspA1I	CMGCKG	4 cut(s)	203, 318, 408, 2213
MspR9I	CCNGG	7 cut(s)	460, 478, 949, 1030, 2123, 2493, 2530
MteI	GCGCNGCGC	1 cut(s)	1926
MvaI	CCWGG	5 cut(s)	460, 478, 949, 1030, 2493
MvnI	CGCG	6 cut(s)	408, 426, 1536, 1928, 1930, 2277
MwoI	GCNNNNNNNGC	6 cut(s)	126, 632, 1315, 1385, 1936, 2258
NarI	GGCGCC	2 cut(s)	1155, 1923
NciI	CCSGG	2 cut(s)	2123, 2530
NcoI	CCATGG	1 cut(s)	684
NlaIII	CATG	7 cut(s)	592, 688, 1840, 1847, 2071, 2225, 2314
NlaIV	GGNNCC	8 cut(s)	1034, 1100, 1156, 1497, 1675, 1723, 1907, 1924
NmeAIII	GCCGAG	2 cut(s)	253, 391
NmuCI	GTSAC	4 cut(s)	442, 1643, 1839, 1979
NruI	TCGCGA	1 cut(s)	2277
NspI	RCATGY	2 cut(s)	1840, 2225
NspV	TTCGAA	2 cut(s)	854, 1008
OliI	CACNNNNGTG	1 cut(s)	2093
PaeI	GCATGC	1 cut(s)	2225
PaeR7I	CTCGAG	2 cut(s)	1250, 2203
PasI	CCCWGGG	1 cut(s)	1029
PciI	ACATGT	1 cut(s)	1836
PciSI	GCTCTTC	2 cut(s)	1546, 1982
PcsI	WCGNNNNNNNCGW	3 cut(s)	530, 860, 1140
PdmI	GAANNNNTTC	1 cut(s)	2514
PfeI	GAWTC	5 cut(s)	573, 965, 1271, 1282, 2510
PflFI	GACNNNGTC	3 cut(s)	134, 1133, 1519
PfoI	TCCNGGA	1 cut(s)	2528
PinAI	ACCGGT	1 cut(s)	91
PleI	GAGTC	5 cut(s)	65, 1242, 1460, 1525, 1717
PluTI	GGCGCC	2 cut(s)	1158, 1926
PmaCI	CACGTG	1 cut(s)	1648
PmlI	CACGTG	1 cut(s)	1648
PpsI	GAGTC	5 cut(s)	65, 1242, 1460, 1525, 1717
Ppu21I	YACGTR	3 cut(s)	297, 643, 1648
PscI	ACATGT	1 cut(s)	1836
Psp6I	CCWGG	5 cut(s)	458, 476, 947, 1028, 2491
PspCI	CACGTG	1 cut(s)	1648
PspGI	CCWGG	5 cut(s)	458, 476, 947, 1028, 2491
PspN4I	GGNNCC	8 cut(s)	1034, 1100, 1156, 1497, 1675, 1723, 1907, 1924
PspPI	GGNCC	5 cut(s)	1033, 1292, 1496, 1674, 2259
PstI	CTGCAG	1 cut(s)	1153
PstNI	CAGNNNCTG	1 cut(s)	759
PsuI	RGATCY	2 cut(s)	716, 1254
PsyI	GACNNNGTC	3 cut(s)	134, 1133, 1519
PvuII	CAGCTG	2 cut(s)	203, 2213
RruI	TCGCGA	1 cut(s)	2277
RseI	CAYNNNNRTG	6 cut(s)	683, 689, 746, 999, 1665, 2093
SacII	CCGCGG	1 cut(s)	409
SalI	GTCGAC	1 cut(s)	1216
SapI	GCTCTTC	2 cut(s)	1546, 1982
SaqAI	TTAA	1 cut(s)	380
Sau96I	GGNCC	5 cut(s)	1033, 1292, 1496, 1674, 2259
SbfI	CCTGCAGG	1 cut(s)	1153
ScaI	AGTACT	2 cut(s)	869, 2196
SchI	GAGTC	5 cut(s)	65, 1242, 1460, 1525, 1718
ScrFI	CCNGG	7 cut(s)	460, 478, 949, 1030, 2123, 2493, 2530
SdaI	CCTGCAGG	1 cut(s)	1153
SduI	GDGCHC	5 cut(s)	1343, 1967, 1994, 2060, 2204
SfaNI	GCATC	5 cut(s)	509, 541, 1222, 2379, 2464
SfcI	CTRYAG	2 cut(s)	110, 1149
SfoI	GGCGCC	2 cut(s)	1156, 1924
Sfr274I	CTCGAG	2 cut(s)	1250, 2203
Sfr303I	CCGCGG	1 cut(s)	409
SfuI	TTCGAA	2 cut(s)	854, 1008
SgrAI	CRCCGGYG	1 cut(s)	1388
SgrBI	CCGCGG	1 cut(s)	409
SgrDI	CGTCGACG	1 cut(s)	1216
SinI	GGWCC	3 cut(s)	1033, 1292, 1496
SlaI	CTCGAG	2 cut(s)	1250, 2203
SmiMI	CAYNNNNRTG	6 cut(s)	683, 689, 746, 999, 1665, 2093
SmlI	CTYRAG	4 cut(s)	1250, 1468, 2203, 2423
SmoI	CTYRAG	4 cut(s)	1250, 1468, 2203, 2423
SnaBI	TACGTA	2 cut(s)	297, 643
SphI	GCATGC	1 cut(s)	2225
Sse8387I	CCTGCAGG	1 cut(s)	1153
Sse9I	AATT	8 cut(s)	182, 290, 808, 858, 1222, 1911, 2014, 2355
SspDI	GGCGCC	2 cut(s)	1154, 1922
SspMI	CTAG	2 cut(s)	2117, 2484
StyD4I	CCNGG	7 cut(s)	458, 476, 947, 1028, 2121, 2491, 2528
StyI	CCWWGG	5 cut(s)	684, 1102, 1612, 1959, 2025
TaaI	ACNGT	7 cut(s)	114, 472, 833, 1551, 1979, 2152, 2199
TaqII	GACCGA	3 cut(s)	390, 891, 2410
TasI	AATT	8 cut(s)	182, 290, 808, 858, 1222, 1911, 2014, 2355
TatI	WGTACW	9 cut(s)	339, 750, 780, 867, 1122, 1650, 1799, 2166, 2194
TauI	GCSGC	9 cut(s)	120, 321, 365, 411, 619, 1539, 1595, 1638, 1928
TfiI	GAWTC	5 cut(s)	573, 965, 1271, 1282, 2510
Tru1I	TTAA	1 cut(s)	380
Tru9I	TTAA	1 cut(s)	380
TscAI	CASTG	7 cut(s)	119, 748, 1197, 1273, 1581, 2232, 2525
TseFI	GTSAC	4 cut(s)	442, 1643, 1839, 1979
TseI	GCWGC	4 cut(s)	200, 207, 227, 648
Tsp45I	GTSAC	4 cut(s)	442, 1643, 1839, 1979
TspGWI	ACGGA	3 cut(s)	430, 1203, 1754
TspRI	CASTG	7 cut(s)	119, 748, 1197, 1273, 1581, 2232, 2525
Tth111I	GACNNNGTC	3 cut(s)	134, 1133, 1519
VpaK11BI	GGWCC	3 cut(s)	1033, 1292, 1496
XapI	RAATTY	4 cut(s)	290, 808, 858, 1911
XbaI	TCTAGA	1 cut(s)	2116
XceI	RCATGY	2 cut(s)	1840, 2225
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1890, 1916
XhoI	CTCGAG	2 cut(s)	1250, 2203
XmiI	GTMKAC	4 cut(s)	84, 696, 820, 1217
XmnI	GAANNNNTTC	1 cut(s)	2514
XspI	CTAG	2 cut(s)	2117, 2484
ZraI	GACGTC	1 cut(s)	2138
ZrmI	AGTACT	2 cut(s)	869, 2196

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.