Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

38311111 .. 38314427

Gene Structure 3317 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG203000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2592 bp

ATGAAACCTATTTTCATTCCTCTTTACCCTTCCAGCTTGTTTCTACTCTTCGTCACCCTACTGGTGGCCGGAGAGTCCGCACCTATCTACTCTCCAATCAATAATATCACCCTTAACTGTGGCTTTTCCGGCGACACGGTCAGTAATTATGATTTTCAAACTTGGACGGGAGACATCAACTCAAAGTTTTTCACCGAAGAAGCTGGTAGCACATCCCAAGTCGCAAAAGCACCACCGTCGTCCTCCACCGGCAGCCAAGTACCGTACACCACAGCTCGGCTTTCACACTCGGAATTTACGTACAGATTTCCCGTCAGTCCAGGCCAGAAGTTCATCCGCTTGTATTTCTTCACGGCTACATACAACACAGACTTCGACCGCTCGAAATCACTTTTCTCTGTCAAAGCCGGTGGCTACACACTTCTCAAGGACTTCAACGCTTCTCTCAGTAATACAGTTTACGATGGCTCTGAGACACTACTCAGAGAATTCTGCCTCAACTTTGAGCCAGATCAGCGGAGTCTGAACATCACGTTCACTCCCAGCCAGGGTGGATACGCTTTTATTAACGGGATCGAAATCATGTCCATGCCAACCAATCTTTACCACTCGGCAGCCCAAGGCGATGGGGTTAGTTATCTCAGCAGCAGCGGTAGTAGATATTACGTTGAAAACAACACCGCTCTGGAGATGATCTACCGAATCAACGTTGGTGGCAACGTAGTGCCTCCGAATGAAGACACCGGCATGTACCGCACCTGGAATCCAACAGACGAGTTCTACTTGGATGATCCAAGTAGAAATTTGAGCATTGCACGAAGATATAATACTCCTCTCAATTTTGCAAAAATCCCTAACTACACTGCGCCCGAAGAGGTGTACCGAACAGGCCGGACAATGGGAGGGAACCGCACCATCAACAAGAGCTACAATCTCACCTGGGGATTCCCTGTAGATCCCGACTTTTCTTACCTGGTGAGGCTCCATTTCTGTGAGATTGATCCGAATATTACCGCGGCTAGAGATAGAATGTTTCAGATTTTCATAGCTAATTTTACAGCTGAACCACACGCGGACATAATCTCATGGACTACAATAAATGGAGTCGTAAATGGGATTCCGATATATAGGGACTACTTTGTGCCGATGCTGAATCTTGGAACCCAGAAGAAAGGTTTCGTTAATCTCTCTGTTGCACTACAAGCAAATCAAGACGATTACGATACTCGATATTACGATGCGATCTTGAATGGGCTTGAAATCTTCAAACTCAATGACACAGACGGCAATCTCGGCGGACCCATCCCCGAGCTACCGAATATCCCGCCAAAGGTGACGTCGGAAGGCTCTAGAAACTCGAAGAAGAAGTCGACTCCTATGCTTGCTATCCTCGCCGGTGTAGTTTCGGCCTTACTTGTTCTTTCCTTCCTTGGGTTTTTAGTTTTCAGGCTTGGAAGAAAAGTCAAGGATTCCAACTCCAGCCACAGGACGACAACGTCAACCATGACCCTTAGGTCACCTTATCCATCTTATTTGTGCCGTGACTTTTCACTGGCAGAGATCAAAGCCGCCACCAAAAACTTCGATGACACTTTAATTGTTGGAGTCGGTGGGTTTGGCTATGTCTACAAAGGATACTTCGACAATGGGGCCACCCTTGTGGCAATCAAACGGCTGAAAGCCACTTCATCGCAGGGGGCCCACGAGTTCATGACGGAAATCAAAATGCTCTCCCGATTGCGCCATCGTCATTTGGTTTCTCTTATAGGATTTTGTGCCGATCAAGGTGAGATGATCTTAGTCTACGATTACATGGCACGAGGGACTCTCGGTGATCATTTGCACCGGACCAAGGAACCACATCTTCCTTGGAAACTACGGCTTCACATTTGTATTGGTGCAGCACAAGGTTTGCACTACCTTCACACAGGTACCGAAGGCACCATCATTCACCGTGACGTAAAGAGCGCAAACATATTATTAGACGAGAAATGGGTAGCGAAGGTTTCAGATTTTGGGTTGTCAAAAAAGGGCATTATCACAATATCCAAGACTCACATTAGCACGAAGGTGAAGGGTAGTTTTGGATATCTTGACCCTGATTACTACCGACGTCAACAACTGACTGAGAAGTCTGACGTGTATTCATTCGGCGTAGTGTTATGCGAGGTATTGTGTGGGAGGCCAGCTGTGACCATTGTAGATAATAATAGAGTTGGGCTAGCTTGCTGGGTCAAGAAGTGTCATCATGAAGGGAAACTTGATCAAATTGTTGACCCAAATTTGAAGGGTGAAATTGCATTGCGATGCTTGCATAAATTTGTTTCCATCGCAATCAGTTGCATGGATGATAATGGGATCAATCGGCCGTCAATGGAGAATGTTGTGAGAGGGCTTCAATTTGCATTTGAAATGCAACAGAACAACGAGAATTATATTGATCACATTGAAAGGATGGTTCAAGATGAGATTGGATTGATCAAGGACAATGAAGGGTCTAGTTCTAGTGAGCGAAGCAGTGGAGCGAAAGAATCCATCCAAAGGTTGACCGGGACAATCTTCTCCGAGATCATCGATCCAGTTGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

863

Amino Acids

96.44

Weight (kDa)

7.28

Isoelectric Point (pI)

35.39

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	38 - 423	2e-29	Malectin-like domain
Pkinase	PF00069	533 - 796	4.9e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	534 - 798	2.9e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	1495, 1513, 2131
AatII	GACGTC	2 cut(s)	1340, 2116
Acc65I	GGTACC	1 cut(s)	1931
AccB1I	GGYRCC	2 cut(s)	1931, 1940
AccBSI	CCGCTC	2 cut(s)	381, 683
AccI	GTMKAC	3 cut(s)	1370, 1626, 1803
AccII	CGCG	2 cut(s)	1016, 1073
AclI	AACGTT	1 cut(s)	708
AclWI	GGATC	6 cut(s)	581, 785, 950, 995, 2366, 2570
AcoI	YGGCCR	2 cut(s)	66, 2366
AcsI	RAATTY	5 cut(s)	293, 488, 802, 2281, 2318
AcyI	GRCGYC	2 cut(s)	1337, 2113
AfaI	GTAC	6 cut(s)	261, 266, 302, 752, 881, 1933
AfiI	CCNNNNNNNGG	9 cut(s)	64, 276, 548, 898, 1330, 1431, 1485, 1852, 2541
AflIII	ACRYGT	1 cut(s)	2139
AjiI	CACGTC	1 cut(s)	2140
AjnI	CCWGG	5 cut(s)	319, 546, 758, 938, 972
AleI	CACNNNNGTG	2 cut(s)	1658, 2069
AluBI	AGCT	9 cut(s)	36, 203, 275, 927, 1049, 1061, 1312, 2189, 2225
AluI	AGCT	9 cut(s)	36, 203, 275, 927, 1049, 1061, 1312, 2189, 2225
Alw26I	GTCTC	2 cut(s)	165, 467
AlwI	GGATC	6 cut(s)	581, 785, 950, 995, 2366, 2570
Ama87I	CYCGRG	1 cut(s)	1307
AoxI	GGCC	8 cut(s)	66, 322, 889, 1407, 1650, 1698, 2183, 2366
ApaI	GGGCCC	1 cut(s)	1702
ApeKI	GCWGC	5 cut(s)	252, 614, 645, 648, 1901
ApoI	RAATTY	5 cut(s)	293, 488, 802, 2281, 2318
ArsI	GACNNNNNNTTYG	4 cut(s)	1322, 1352, 1354, 1384
Asp700I	GAANNNNTTC	1 cut(s)	1175
Asp718I	GGTACC	1 cut(s)	1931
AspLEI	GCGC	3 cut(s)	868, 1743, 1970
AspS9I	GGNCC	5 cut(s)	1298, 1650, 1698, 1699, 1848
AsuC2I	CCSGG	1 cut(s)	2551
AsuNHI	GCTAGC	1 cut(s)	2221
AvaI	CYCGRG	1 cut(s)	1307
AvaII	GGWCC	2 cut(s)	1298, 1848
AxyI	CCTNAGG	1 cut(s)	1511
BaeGI	GKGCMC	1 cut(s)	1702
BaeI	ACNNNNGTAYC	2 cut(s)	1915, 1948
BanI	GGYRCC	2 cut(s)	1931, 1940
BanII	GRGCYC	1 cut(s)	1702
BarI	GAAGNNNNNNTAC	2 cut(s)	811, 843
BauI	CACGAG	2 cut(s)	1703, 1818
BbsI	GAAGAC	1 cut(s)	744
BbvI	GCAGC	5 cut(s)	264, 626, 657, 660, 1913
BceAI	ACGGC	6 cut(s)	369, 1300, 1524, 1688, 1895, 2353
BcgI	CGANNNNNNTGC	4 cut(s)	219, 253, 1360, 1394
BciT130I	CCWGG	5 cut(s)	321, 548, 760, 940, 974
BciVI	GTATCC	2 cut(s)	548, 1628
BclI	TGATCA	4 cut(s)	1834, 2263, 2440, 2478
BcnI	CCSGG	1 cut(s)	2551
BcoDI	GTCTC	2 cut(s)	165, 467
BfaI	CTAG	5 cut(s)	1020, 1350, 2222, 2499, 2505
BfmI	CTRYAG	1 cut(s)	951
BfuI	GTATCC	2 cut(s)	548, 1628
BisI	GCNGC	7 cut(s)	253, 615, 646, 649, 1017, 1569, 1902
BlsI	GCNGC	7 cut(s)	254, 616, 647, 650, 1018, 1570, 1903
Bme1390I	CCNGG	6 cut(s)	321, 548, 760, 940, 974, 2551
Bme18I	GGWCC	2 cut(s)	1298, 1848
BmeT110I	CYCGRG	1 cut(s)	1307
BmgBI	CACGTC	1 cut(s)	2140
BmgT120I	GGNCC	5 cut(s)	1298, 1650, 1698, 1699, 1848
BmrFI	CCNGG	6 cut(s)	321, 548, 760, 940, 974, 2551
BmsI	GCATC	3 cut(s)	1137, 1228, 2297
BmtI	GCTAGC	1 cut(s)	2225
BpiI	GAAGAC	1 cut(s)	744
BplI	GAGNNNNNCTC	2 cut(s)	1812, 1844
BpmI	CTGGAG	2 cut(s)	707, 1462
BpuEI	CTTGAG	1 cut(s)	410
BpuMI	CCSGG	1 cut(s)	2551
Bsa29I	ATCGAT	1 cut(s)	2574
BsaAI	YACGTR	1 cut(s)	300
BsaBI	GATNNNNATC	1 cut(s)	578
BsaHI	GRCGYC	2 cut(s)	1337, 2113
BsaJI	CCNNGG	7 cut(s)	547, 619, 939, 1014, 1429, 1851, 1868
BsaWI	WCCGGW	1 cut(s)	1845
BsaXI	ACNNNNNCTCC	2 cut(s)	523, 553
Bsc4I	CCNNNNNNNGG	9 cut(s)	64, 276, 548, 898, 1330, 1431, 1485, 1852, 2541
Bse118I	RCCGGY	4 cut(s)	248, 407, 743, 1394
Bse1I	ACTGG	3 cut(s)	66, 1557, 2579
Bse21I	CCTNAGG	1 cut(s)	1511
Bse3DI	GCAATG	2 cut(s)	810, 2300
Bse8I	GATNNNNATC	1 cut(s)	578
BseBI	CCWGG	5 cut(s)	321, 548, 760, 940, 974
BseCI	ATCGAT	1 cut(s)	2574
BseDI	CCNNGG	7 cut(s)	547, 619, 939, 1014, 1429, 1851, 1868
BseGI	GGATG	7 cut(s)	212, 333, 793, 1302, 2353, 2460, 2535
BseJI	GATNNNNATC	1 cut(s)	578
BseLI	CCNNNNNNNGG	9 cut(s)	64, 276, 548, 898, 1330, 1431, 1485, 1852, 2541
BseMI	GCAATG	2 cut(s)	810, 2300
BseMII	CTCAG	5 cut(s)	460, 462, 496, 655, 2118
BseNI	ACTGG	3 cut(s)	66, 1557, 2579
BseRI	GAGGAG	1 cut(s)	822
BseSI	GKGCMC	1 cut(s)	1702
BseX3I	CGGCCG	1 cut(s)	2366
BseXI	GCAGC	5 cut(s)	264, 626, 657, 660, 1913
BseYI	CCCAGC	2 cut(s)	542, 2229
BsgI	GTGCAG	1 cut(s)	1920
Bsh1236I	CGCG	2 cut(s)	1016, 1073
Bsh1285I	CGRYCG	2 cut(s)	379, 2369
BshFI	GGCC	8 cut(s)	68, 324, 891, 1409, 1652, 1700, 2185, 2368
BshNI	GGYRCC	2 cut(s)	1931, 1940
BshVI	ATCGAT	1 cut(s)	2574
BsiEI	CGRYCG	2 cut(s)	379, 2369
BsiHKCI	CYCGRG	1 cut(s)	1307
BsiSI	CCGG	9 cut(s)	69, 129, 249, 408, 744, 892, 1395, 1846, 2550
BslFI	GGGAC	3 cut(s)	1145, 1837, 2566
BslI	CCNNNNNNNGG	9 cut(s)	64, 276, 548, 898, 1330, 1431, 1485, 1852, 2541
BsmAI	GTCTC	2 cut(s)	165, 467
BsmFI	GGGAC	3 cut(s)	1145, 1837, 2566
BsnI	GGCC	8 cut(s)	68, 324, 891, 1409, 1652, 1700, 2185, 2368
BsoBI	CYCGRG	1 cut(s)	1307
Bsp120I	GGGCCC	1 cut(s)	1698
Bsp1286I	GDGCHC	1 cut(s)	1702
BspANI	GGCC	8 cut(s)	68, 324, 891, 1409, 1652, 1700, 2185, 2368
BspCNI	CTCAG	5 cut(s)	459, 463, 495, 654, 2119
BspDI	ATCGAT	1 cut(s)	2574
BspFNI	CGCG	2 cut(s)	1016, 1073
BspHI	TCATGA	2 cut(s)	1710, 2248
BspOI	GCTAGC	1 cut(s)	2225
BspPI	GGATC	6 cut(s)	581, 785, 950, 995, 2366, 2570
BspT107I	GGYRCC	2 cut(s)	1931, 1940
BsrBI	CCGCTC	2 cut(s)	381, 683
BsrDI	GCAATG	2 cut(s)	810, 2300
BsrFI	RCCGGY	4 cut(s)	248, 407, 743, 1394
BsrI	ACTGG	3 cut(s)	66, 1557, 2579
BssAI	RCCGGY	4 cut(s)	248, 407, 743, 1394
BssECI	CCNNGG	7 cut(s)	547, 619, 939, 1014, 1429, 1851, 1868
BssNI	GRCGYC	2 cut(s)	1337, 2113
BssSI	CACGAG	2 cut(s)	1703, 1818
BssT1I	CCWWGG	4 cut(s)	619, 1429, 1851, 1868
Bst2BI	CACGAG	2 cut(s)	1703, 1818
Bst2UI	CCWGG	5 cut(s)	321, 548, 760, 940, 974
Bst4CI	ACNGT	6 cut(s)	119, 139, 237, 264, 457, 1955
Bst6I	CTCTTC	2 cut(s)	53, 867
BstACI	GRCGYC	2 cut(s)	1337, 2113
BstBAI	YACGTR	1 cut(s)	300
BstC8I	GCNNGC	5 cut(s)	1383, 2187, 2223, 2227, 2312
BstDEI	CTNAG	7 cut(s)	446, 471, 482, 641, 1511, 1798, 2127
BstDSI	CCRYGG	1 cut(s)	1014
BstEII	GGTNACC	1 cut(s)	1515
BstF5I	GGATG	7 cut(s)	212, 333, 793, 1302, 2353, 2460, 2535
BstFNI	CGCG	2 cut(s)	1016, 1073
BstHHI	GCGC	3 cut(s)	868, 1743, 1970
BstMAI	GTCTC	2 cut(s)	165, 467
BstMCI	CGRYCG	2 cut(s)	379, 2369
BstMWI	GCNNNNNNNGC	7 cut(s)	129, 514, 753, 1202, 1293, 1391, 2311
BstNI	CCWGG	5 cut(s)	321, 548, 760, 940, 974
BstNSI	RCATGY	1 cut(s)	751
BstPI	GGTNACC	1 cut(s)	1515
BstSCI	CCNGG	6 cut(s)	319, 546, 758, 938, 972, 2549
BstSFI	CTRYAG	1 cut(s)	951
BstSLI	GKGCMC	1 cut(s)	1702
BstSNI	TACGTA	1 cut(s)	300
BstUI	CGCG	2 cut(s)	1016, 1073
BstV1I	GCAGC	5 cut(s)	264, 626, 657, 660, 1913
BstV2I	GAAGAC	1 cut(s)	744
BstX2I	RGATCY	1 cut(s)	955
BstXI	CCANNNNNNTGG	2 cut(s)	626, 1660
BstYI	RGATCY	1 cut(s)	955
BstZI	CGGCCG	1 cut(s)	2366
Bsu15I	ATCGAT	1 cut(s)	2574
Bsu36I	CCTNAGG	1 cut(s)	1511
BsuI	GTATCC	2 cut(s)	548, 1628
BsuRI	GGCC	8 cut(s)	68, 324, 891, 1409, 1652, 1700, 2185, 2368
BsuTUI	ATCGAT	1 cut(s)	2574
BtgI	CCRYGG	1 cut(s)	1014
BtgZI	GCGATG	4 cut(s)	639, 1674, 2314, 2320
BtrI	CACGTC	1 cut(s)	2140
BtsCI	GGATG	7 cut(s)	212, 333, 793, 1302, 2353, 2460, 2535
BtsI	GCAGTG	2 cut(s)	861, 2524
BtsIMutI	CAGTG	3 cut(s)	861, 1550, 2524
Cac8I	GCNNGC	5 cut(s)	1383, 2187, 2223, 2227, 2312
CciI	TCATGA	2 cut(s)	1710, 2248
CfoI	GCGC	3 cut(s)	868, 1743, 1970
Cfr10I	RCCGGY	4 cut(s)	248, 407, 743, 1394
Cfr13I	GGNCC	5 cut(s)	1298, 1650, 1698, 1699, 1848
Cfr42I	CCGCGG	1 cut(s)	1017
ClaI	ATCGAT	1 cut(s)	2574
CsiI	ACCWGGT	1 cut(s)	972
Csp6I	GTAC	6 cut(s)	260, 265, 301, 751, 880, 1932
CspCI	CAANNNNNGTGG	4 cut(s)	391, 426, 694, 729
CviAII	CATG	9 cut(s)	583, 589, 748, 1086, 1504, 1711, 1813, 2249, 2344
CviQI	GTAC	6 cut(s)	260, 265, 301, 751, 880, 1932
DdeI	CTNAG	7 cut(s)	446, 471, 482, 641, 1511, 1798, 2127
DrdI	GACNNNNNNGTC	3 cut(s)	1495, 1513, 2131
DseDI	GACNNNNNNGTC	3 cut(s)	1495, 1513, 2131
EaeI	YGGCCR	2 cut(s)	66, 2366
EagI	CGGCCG	1 cut(s)	2366
Eam1104I	CTCTTC	2 cut(s)	53, 867
EarI	CTCTTC	2 cut(s)	53, 867
EciI	GGCGGA	1 cut(s)	1311
EclXI	CGGCCG	1 cut(s)	2366
Eco105I	TACGTA	1 cut(s)	300
Eco130I	CCWWGG	4 cut(s)	619, 1429, 1851, 1868
Eco24I	GRGCYC	1 cut(s)	1702
Eco32I	GATATC	1 cut(s)	2090
Eco47I	GGWCC	2 cut(s)	1298, 1848
Eco52I	CGGCCG	1 cut(s)	2366
Eco81I	CCTNAGG	1 cut(s)	1511
Eco88I	CYCGRG	1 cut(s)	1307
Eco91I	GGTNACC	1 cut(s)	1515
EcoO109I	RGGNCCY	1 cut(s)	1698
EcoO65I	GGTNACC	1 cut(s)	1515
EcoRI	GAATTC	1 cut(s)	488
EcoRII	CCWGG	5 cut(s)	319, 546, 758, 938, 972
EcoRV	GATATC	1 cut(s)	2090
EcoT14I	CCWWGG	4 cut(s)	619, 1429, 1851, 1868
EcoT38I	GRGCYC	1 cut(s)	1702
ErhI	CCWWGG	4 cut(s)	619, 1429, 1851, 1868
FaeI	CATG	9 cut(s)	586, 592, 751, 1089, 1507, 1714, 1816, 2252, 2347
FalI	AAGNNNNNCTT	2 cut(s)	2244, 2276
FaqI	GGGAC	3 cut(s)	1145, 1837, 2566
FatI	CATG	9 cut(s)	582, 588, 747, 1085, 1503, 1710, 1812, 2248, 2343
FauI	CCCGC	1 cut(s)	1332
FbaI	TGATCA	4 cut(s)	1834, 2263, 2440, 2478
FblI	GTMKAC	3 cut(s)	1370, 1626, 1803
Fnu4HI	GCNGC	7 cut(s)	253, 615, 646, 649, 1017, 1569, 1902
FokI	GGATG	7 cut(s)	199, 320, 800, 1289, 2360, 2467, 2522
FriOI	GRGCYC	1 cut(s)	1702
Fsp4HI	GCNGC	7 cut(s)	253, 615, 646, 649, 1017, 1569, 1902
FspBI	CTAG	5 cut(s)	1020, 1350, 2222, 2499, 2505
GlaI	GCGC	3 cut(s)	867, 1742, 1969
GluI	GCNGC	7 cut(s)	253, 615, 646, 649, 1017, 1569, 1902
GsaI	CCCAGC	2 cut(s)	546, 2233
GsuI	CTGGAG	2 cut(s)	707, 1462
HaeIII	GGCC	8 cut(s)	68, 324, 891, 1409, 1652, 1700, 2185, 2368
HapII	CCGG	9 cut(s)	69, 129, 249, 408, 744, 892, 1395, 1846, 2550
HhaI	GCGC	3 cut(s)	868, 1743, 1970
Hin1I	GRCGYC	2 cut(s)	1337, 2113
Hin1II	CATG	9 cut(s)	586, 592, 751, 1089, 1507, 1714, 1816, 2252, 2347
Hin6I	GCGC	3 cut(s)	866, 1741, 1968
HinP1I	GCGC	3 cut(s)	866, 1741, 1968
HincII	GTYRAC	5 cut(s)	1371, 1500, 2117, 2275, 2547
HindII	GTYRAC	5 cut(s)	1371, 1500, 2117, 2275, 2547
HpaII	CCGG	9 cut(s)	69, 129, 249, 408, 744, 892, 1395, 1846, 2550
Hpy99I	CGWCG	3 cut(s)	241, 1342, 2115
HpyCH4III	ACNGT	6 cut(s)	119, 139, 237, 264, 457, 1955
HpyF10VI	GCNNNNNNNGC	7 cut(s)	129, 514, 753, 1202, 1293, 1391, 2311
HpyF3I	CTNAG	7 cut(s)	446, 471, 482, 641, 1511, 1798, 2127
Hsp92I	GRCGYC	2 cut(s)	1337, 2113
Hsp92II	CATG	9 cut(s)	586, 592, 751, 1089, 1507, 1714, 1816, 2252, 2347
HspAI	GCGC	3 cut(s)	866, 1741, 1968
KpnI	GGTACC	1 cut(s)	1935
Ksp22I	TGATCA	4 cut(s)	1834, 2263, 2440, 2478
KspI	CCGCGG	1 cut(s)	1017
LmnI	GCTCC	2 cut(s)	987, 2522
Lsp1109I	GCAGC	5 cut(s)	264, 626, 657, 660, 1913
LweI	GCATC	3 cut(s)	1137, 1228, 2297
MabI	ACCWGGT	1 cut(s)	972
MaeI	CTAG	5 cut(s)	1020, 1350, 2222, 2499, 2505
MaeIII	GTNAC	6 cut(s)	52, 1333, 1515, 1541, 1955, 2191
MbiI	CCGCTC	2 cut(s)	381, 683
MflI	RGATCY	1 cut(s)	955
MhlI	GDGCHC	1 cut(s)	1702
MlyI	GAGTC	7 cut(s)	83, 529, 1113, 1366, 1614, 1819, 2047
MmeI	TCCRAC	4 cut(s)	791, 1320, 1497, 1582
MroXI	GAANNNNTTC	1 cut(s)	1175
MseI	TTAA	4 cut(s)	114, 567, 1182, 1595
MslI	CAYNNNNRTG	6 cut(s)	587, 746, 990, 1658, 2069, 2305
MspA1I	CMGCKG	5 cut(s)	517, 651, 1016, 1061, 2189
MspI	CCGG	9 cut(s)	69, 129, 249, 408, 744, 892, 1395, 1846, 2550
MspR9I	CCNGG	6 cut(s)	321, 548, 760, 940, 974, 2551
MvaI	CCWGG	5 cut(s)	321, 548, 760, 940, 974
MvnI	CGCG	2 cut(s)	1016, 1073
MwoI	GCNNNNNNNGC	7 cut(s)	129, 514, 753, 1202, 1293, 1391, 2311
NciI	CCSGG	1 cut(s)	2551
NheI	GCTAGC	1 cut(s)	2221
NlaIII	CATG	9 cut(s)	586, 592, 751, 1089, 1507, 1714, 1816, 2252, 2347
NmeAIII	GCCGAG	3 cut(s)	256, 590, 1272
NmuCI	GTSAC	6 cut(s)	52, 1333, 1515, 1541, 1955, 2191
NspI	RCATGY	1 cut(s)	751
OliI	CACNNNNGTG	2 cut(s)	1658, 2069
PagI	TCATGA	2 cut(s)	1710, 2248
PcsI	WCGNNNNNNNCGW	1 cut(s)	296
PdmI	GAANNNNTTC	1 cut(s)	1175
PfeI	GAWTC	7 cut(s)	702, 763, 945, 1117, 1153, 1469, 2531
PflFI	GACNNNGTC	2 cut(s)	137, 1495
PkrI	GCNGC	7 cut(s)	254, 616, 647, 650, 1018, 1570, 1903
PleI	GAGTC	7 cut(s)	82, 528, 1112, 1366, 1613, 1819, 2047
PpsI	GAGTC	7 cut(s)	82, 528, 1112, 1366, 1613, 1819, 2047
Ppu21I	YACGTR	1 cut(s)	300
Psp1406I	AACGTT	1 cut(s)	708
Psp6I	CCWGG	5 cut(s)	319, 546, 758, 938, 972
PspEI	GGTNACC	1 cut(s)	1515
PspFI	CCCAGC	2 cut(s)	542, 2229
PspGI	CCWGG	5 cut(s)	319, 546, 758, 938, 972
PspOMI	GGGCCC	1 cut(s)	1698
PspPI	GGNCC	5 cut(s)	1298, 1650, 1698, 1699, 1848
PsuI	RGATCY	1 cut(s)	955
PsyI	GACNNNGTC	2 cut(s)	137, 1495
PvuII	CAGCTG	2 cut(s)	1061, 2189
RsaI	GTAC	6 cut(s)	261, 266, 302, 752, 881, 1933
RsaNI	GTAC	6 cut(s)	260, 265, 301, 751, 880, 1932
RseI	CAYNNNNRTG	6 cut(s)	587, 746, 990, 1658, 2069, 2305
SacII	CCGCGG	1 cut(s)	1017
SalI	GTCGAC	1 cut(s)	1369
SaqAI	TTAA	4 cut(s)	114, 567, 1182, 1595
SatI	GCNGC	7 cut(s)	253, 615, 646, 649, 1017, 1569, 1902
Sau96I	GGNCC	5 cut(s)	1298, 1650, 1698, 1699, 1848
SchI	GAGTC	7 cut(s)	83, 529, 1113, 1366, 1614, 1819, 2047
ScrFI	CCNGG	6 cut(s)	321, 548, 760, 940, 974, 2551
SduI	GDGCHC	1 cut(s)	1702
SexAI	ACCWGGT	1 cut(s)	972
SfaNI	GCATC	3 cut(s)	1137, 1228, 2297
SfcI	CTRYAG	1 cut(s)	951
Sfr303I	CCGCGG	1 cut(s)	1017
SgrAI	CRCCGGYG	1 cut(s)	1394
SgrBI	CCGCGG	1 cut(s)	1017
SinI	GGWCC	2 cut(s)	1298, 1848
SmiMI	CAYNNNNRTG	6 cut(s)	587, 746, 990, 1658, 2069, 2305
SmlI	CTYRAG	1 cut(s)	425
SmoI	CTYRAG	1 cut(s)	425
SnaBI	TACGTA	1 cut(s)	300
SspI	AATATT	1 cut(s)	1009
SspMI	CTAG	5 cut(s)	1020, 1350, 2222, 2499, 2505
StyD4I	CCNGG	6 cut(s)	319, 546, 758, 938, 972, 2549
StyI	CCWWGG	4 cut(s)	619, 1429, 1851, 1868
TaaI	ACNGT	6 cut(s)	119, 139, 237, 264, 457, 1955
TaqI	TCGA	9 cut(s)	375, 383, 576, 1228, 1358, 1370, 1584, 1641, 2574
TauI	GCSGC	2 cut(s)	1019, 1571
TfiI	GAWTC	7 cut(s)	702, 763, 945, 1117, 1153, 1469, 2531
Tru1I	TTAA	4 cut(s)	114, 567, 1182, 1595
Tru9I	TTAA	4 cut(s)	114, 567, 1182, 1595
TscAI	CASTG	3 cut(s)	868, 1557, 2524
TseFI	GTSAC	6 cut(s)	52, 1333, 1515, 1541, 1955, 2191
TseI	GCWGC	5 cut(s)	252, 614, 645, 648, 1901
Tsp45I	GTSAC	6 cut(s)	52, 1333, 1515, 1541, 1955, 2191
TspGWI	ACGGA	1 cut(s)	1730
TspRI	CASTG	3 cut(s)	868, 1557, 2524
Tth111I	GACNNNGTC	2 cut(s)	137, 1495
VpaK11BI	GGWCC	2 cut(s)	1298, 1848
XapI	RAATTY	5 cut(s)	293, 488, 802, 2281, 2318
XbaI	TCTAGA	1 cut(s)	1349
XceI	RCATGY	1 cut(s)	751
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1866
XmiI	GTMKAC	3 cut(s)	1370, 1626, 1803
XmnI	GAANNNNTTC	1 cut(s)	1175
XspI	CTAG	5 cut(s)	1020, 1350, 2222, 2499, 2505
ZraI	GACGTC	2 cut(s)	1338, 2114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.