RLG00000021532

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
76236327 .. 76237829
1503 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021532

Sequence Viewer

Length: 747 bp
ATGGCGTTTCGATGGATGCTGTCAATTTGGGGTTTTGATTTGGGCGAAGCGAAGAGGCCGAAGGATGAGCATATTAGGGAGGGTTACTTTTGCTTGTTTCTACTCTCGGTCACCCTACTGGTGGCCGGAGAGTCCACAACCATCTACACTCCGACTGATGATATCACACTTAACTGTGGCTCTTCCGGCCGCATGGTCAGTAACTTTGATTTTCGAACTTGGAGTGGAGATATCAACTCAGAGCTTTCCCTTATAGAAGTTGGTAGCACATCCCGAGGTTTGAAAGCACCACCGTCGTCCTCCACGGGCAGCCAAGTACCGTACACCACAGCACGACTTTCTCACTCGGAATTCACTTACCGATTTCCCGTCAGTCCGGGCCAAAAGTTCATCCGCTTGTACTTCTACCCAGGTTCATACAGCGCCAACTTCGATCGCTCCAAGTCTCTCTTCTCTGTCAAAACGGGTGGCTACACCCTTCTCAAGGACTTCAACGTTTCTGTCAGCGCAGACGCTGGTTATCTTGAGACGATGCTCAAAGAATTCTGTATTAACATTGGGCCAGAACAACAGATGCTGAACATCACATTCACTCCCAGCAAAGATGGATACACTTTTATCAACGGGATTGAAATTATGTCCATGCCTGCCTATCTTTACCACACTGCAGCCCAAGACGATGGGCCAAGTATTATCGGCAACGAAAACCGGAACATCCCAGTGAAAAACCACACCGCATGGAGATGA

Protein Analysis

249

Amino Acids

27.73

Weight (kDa)

6.09

Isoelectric Point (pI)

44.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 57 - 224 7.8e-10 Malectin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 3 cut(s) 190, 394, 735
AclI AACGTT 1 cut(s) 495
AcoI YGGCCR 2 cut(s) 123, 187
AcsI RAATTY 2 cut(s) 350, 542
AfaI GTAC 3 cut(s) 318, 323, 401
AfiI CCNNNNNNNGG 2 cut(s) 121, 484
AgsI TTSAA 3 cut(s) 283, 493, 632
AjnI CCWGG 1 cut(s) 409
AjuI GAANNNNNNNTTGG 2 cut(s) 434, 466
AluBI AGCT 1 cut(s) 244
AluI AGCT 1 cut(s) 244
Alw26I GTCTC 2 cut(s) 450, 521
AlwNI CAGNNNCTG 2 cut(s) 515, 577
Ama87I CYCGRG 1 cut(s) 273
AoxI GGCC 6 cut(s) 56, 123, 187, 379, 560, 683
ApeKI GCWGC 2 cut(s) 309, 668
ApoI RAATTY 2 cut(s) 350, 542
AspLEI GCGC 2 cut(s) 425, 509
AspS9I GGNCC 3 cut(s) 379, 560, 683
AsuC2I CCSGG 1 cut(s) 378
AsuHPI GGTGA 1 cut(s) 103
AsuII TTCGAA 1 cut(s) 214
AvaI CYCGRG 1 cut(s) 273
BbvI GCAGC 2 cut(s) 321, 680
BccI CCATC 4 cut(s) 6, 149, 599, 674
BcgI CGANNNNNNTGC 2 cut(s) 276, 310
BciT130I CCWGG 1 cut(s) 411
BciVI GTATCC 1 cut(s) 602
BcnI CCSGG 1 cut(s) 378
BcoDI GTCTC 2 cut(s) 450, 521
BfmI CTRYAG 1 cut(s) 666
BfoI RGCGCY 1 cut(s) 426
BfuI GTATCC 1 cut(s) 602
BisI GCNGC 3 cut(s) 190, 310, 669
BlsI GCNGC 3 cut(s) 191, 311, 670
Bme1390I CCNGG 2 cut(s) 378, 411
BmeT110I CYCGRG 1 cut(s) 273
BmgT120I GGNCC 3 cut(s) 379, 560, 683
BmrFI CCNGG 2 cut(s) 378, 411
BmrI ACTGGG 1 cut(s) 713
BmsI GCATC 3 cut(s) 6, 522, 564
BmuI ACTGGG 1 cut(s) 713
Bpu14I TTCGAA 1 cut(s) 214
BpuEI CTTGAG 2 cut(s) 467, 545
BpuMI CCSGG 1 cut(s) 378
BsaJI CCNNGG 3 cut(s) 274, 303, 409
BsaWI WCCGGW 1 cut(s) 708
BsaXI ACNNNNNCTCC 2 cut(s) 577, 607
Bsc4I CCNNNNNNNGG 2 cut(s) 121, 484
Bse1I ACTGG 2 cut(s) 123, 719
BseBI CCWGG 1 cut(s) 411
BseDI CCNNGG 3 cut(s) 274, 303, 409
BseGI GGATG 5 cut(s) 21, 70, 269, 390, 714
BseLI CCNNNNNNNGG 2 cut(s) 121, 484
BseMII CTCAG 1 cut(s) 252
BseNI ACTGG 2 cut(s) 123, 719
BseX3I CGGCCG 1 cut(s) 187
BseXI GCAGC 2 cut(s) 321, 680
BseYI CCCAGC 1 cut(s) 596
Bsh1285I CGRYCG 2 cut(s) 190, 436
BshFI GGCC 6 cut(s) 58, 125, 189, 381, 562, 685
BsiEI CGRYCG 2 cut(s) 190, 436
BsiHKCI CYCGRG 1 cut(s) 273
BsiSI CCGG 4 cut(s) 126, 186, 377, 709
BslI CCNNNNNNNGG 2 cut(s) 121, 484
BsmAI GTCTC 2 cut(s) 450, 521
BsmBI CGTCTC 1 cut(s) 521
BsnI GGCC 6 cut(s) 58, 125, 189, 381, 562, 685
BsoBI CYCGRG 1 cut(s) 273
Bsp119I TTCGAA 1 cut(s) 214
Bsp143I GATC 1 cut(s) 433
BspACI CCGC 3 cut(s) 190, 394, 735
BspANI GGCC 6 cut(s) 58, 125, 189, 381, 562, 685
BspCNI CTCAG 1 cut(s) 251
BspMAI CTGCAG 1 cut(s) 670
BspQI GCTCTTC 1 cut(s) 187
BspT104I TTCGAA 1 cut(s) 214
BsrI ACTGG 2 cut(s) 123, 719
BssECI CCNNGG 3 cut(s) 274, 303, 409
BssMI GATC 1 cut(s) 433
Bst2UI CCWGG 1 cut(s) 411
Bst4CI ACNGT 3 cut(s) 176, 294, 321
Bst6I CTCTTC 3 cut(s) 47, 187, 455
BstBI TTCGAA 1 cut(s) 214
BstC8I GCNNGC 1 cut(s) 648
BstDEI CTNAG 1 cut(s) 238
BstDSI CCRYGG 1 cut(s) 303
BstEII GGTNACC 1 cut(s) 109
BstENI CCTNNNNNAGG 1 cut(s) 482
BstF5I GGATG 5 cut(s) 21, 70, 269, 390, 714
BstH2I RGCGCY 1 cut(s) 426
BstHHI GCGC 2 cut(s) 425, 509
BstKTI GATC 1 cut(s) 436
BstMAI GTCTC 2 cut(s) 450, 521
BstMBI GATC 1 cut(s) 433
BstMCI CGRYCG 2 cut(s) 190, 436
BstMWI GCNNNNNNNGC 1 cut(s) 186
BstNI CCWGG 1 cut(s) 411
BstPI GGTNACC 1 cut(s) 109
BstSCI CCNGG 2 cut(s) 376, 409
BstSFI CTRYAG 1 cut(s) 666
BstV1I GCAGC 2 cut(s) 321, 680
BstXI CCANNNNNNTGG 1 cut(s) 680
BstZI CGGCCG 1 cut(s) 187
BsuI GTATCC 1 cut(s) 602
BsuRI GGCC 6 cut(s) 58, 125, 189, 381, 562, 685
BtgI CCRYGG 1 cut(s) 303
BtsCI GGATG 5 cut(s) 21, 70, 269, 390, 714
BtsI GCAGTG 1 cut(s) 663
BtsIMutI CAGTG 2 cut(s) 663, 726
Cac8I GCNNGC 1 cut(s) 648
CaiI CAGNNNCTG 2 cut(s) 515, 577
CfoI GCGC 2 cut(s) 425, 509
Cfr13I GGNCC 3 cut(s) 379, 560, 683
CseI GACGC 1 cut(s) 521
Csp6I GTAC 3 cut(s) 317, 322, 400
CspCI CAANNNNNGTGG 2 cut(s) 448, 483
CviAII CATG 3 cut(s) 193, 643, 738
CviQI GTAC 3 cut(s) 317, 322, 400
DdeI CTNAG 1 cut(s) 238
DpnI GATC 1 cut(s) 435
DpnII GATC 1 cut(s) 433
EaeI YGGCCR 2 cut(s) 123, 187
EagI CGGCCG 1 cut(s) 187
Eam1104I CTCTTC 3 cut(s) 47, 187, 455
EarI CTCTTC 3 cut(s) 47, 187, 455
EclXI CGGCCG 1 cut(s) 187
Eco32I GATATC 2 cut(s) 163, 232
Eco52I CGGCCG 1 cut(s) 187
Eco88I CYCGRG 1 cut(s) 273
Eco91I GGTNACC 1 cut(s) 109
EcoNI CCTNNNNNAGG 1 cut(s) 482
EcoO65I GGTNACC 1 cut(s) 109
EcoRI GAATTC 2 cut(s) 350, 542
EcoRII CCWGG 1 cut(s) 409
EcoRV GATATC 2 cut(s) 163, 232
Esp3I CGTCTC 1 cut(s) 521
FaeI CATG 3 cut(s) 196, 646, 741
FaiI YATR 7 cut(s) 72, 194, 254, 418, 638, 644, 739
FalI AAGNNNNNCTT 2 cut(s) 434, 466
FatI CATG 3 cut(s) 192, 642, 737
Fnu4HI GCNGC 3 cut(s) 190, 310, 669
FokI GGATG 5 cut(s) 28, 77, 256, 377, 701
Fsp4HI GCNGC 3 cut(s) 190, 310, 669
GlaI GCGC 2 cut(s) 424, 508
GluI GCNGC 3 cut(s) 190, 310, 669
GsaI CCCAGC 1 cut(s) 600
HaeII RGCGCY 1 cut(s) 426
HaeIII GGCC 6 cut(s) 58, 125, 189, 381, 562, 685
HapII CCGG 4 cut(s) 126, 186, 377, 709
HgaI GACGC 1 cut(s) 521
HhaI GCGC 2 cut(s) 425, 509
Hin1II CATG 3 cut(s) 196, 646, 741
Hin6I GCGC 2 cut(s) 423, 507
HinP1I GCGC 2 cut(s) 423, 507
HinfI GANTC 1 cut(s) 131
HpaII CCGG 4 cut(s) 126, 186, 377, 709
HphI GGTGA 1 cut(s) 103
Hpy166II GTNNAC 2 cut(s) 135, 324
Hpy188I TCNGA 3 cut(s) 153, 241, 349
Hpy188III TCNNGA 2 cut(s) 273, 524
Hpy8I GTNNAC 2 cut(s) 135, 324
Hpy99I CGWCG 1 cut(s) 298
HpyAV CCTTC 2 cut(s) 55, 488
HpyCH4III ACNGT 3 cut(s) 176, 294, 321
HpyCH4IV ACGT 1 cut(s) 495
HpyCH4V TGCA 1 cut(s) 668
HpyF10VI GCNNNNNNNGC 1 cut(s) 186
HpyF3I CTNAG 1 cut(s) 238
HpySE526I ACGT 1 cut(s) 495
Hsp92II CATG 3 cut(s) 196, 646, 741
HspAI GCGC 2 cut(s) 423, 507
Kzo9I GATC 1 cut(s) 433
LguI GCTCTTC 1 cut(s) 187
LmnI GCTCC 1 cut(s) 443
Lsp1109I GCAGC 2 cut(s) 321, 680
LweI GCATC 3 cut(s) 6, 522, 564
MaeII ACGT 1 cut(s) 495
MaeIII GTNAC 3 cut(s) 83, 109, 200
MalI GATC 1 cut(s) 435
MboI GATC 1 cut(s) 433
MboII GAAGA 3 cut(s) 64, 174, 442
MluCI AATT 4 cut(s) 24, 350, 542, 633
MlyI GAGTC 1 cut(s) 140
MmeI TCCRAC 1 cut(s) 176
MnlI CCTC 4 cut(s) 48, 73, 269, 310
MseI TTAA 2 cut(s) 171, 552
MslI CAYNNNNRTG 2 cut(s) 719, 742
MspI CCGG 4 cut(s) 126, 186, 377, 709
MspR9I CCNGG 2 cut(s) 378, 411
MvaI CCWGG 1 cut(s) 411
MwoI GCNNNNNNNGC 1 cut(s) 186
NciI CCSGG 1 cut(s) 378
NdeII GATC 1 cut(s) 433
NlaIII CATG 3 cut(s) 196, 646, 741
NmuCI GTSAC 1 cut(s) 109
NspV TTCGAA 1 cut(s) 214
PciSI GCTCTTC 1 cut(s) 187
PkrI GCNGC 3 cut(s) 191, 311, 670
Ple19I CGATCG 1 cut(s) 436
PleI GAGTC 1 cut(s) 139
PpsI GAGTC 1 cut(s) 139
Psp1406I AACGTT 1 cut(s) 495
Psp6I CCWGG 1 cut(s) 409
PspEI GGTNACC 1 cut(s) 109
PspFI CCCAGC 1 cut(s) 596
PspGI CCWGG 1 cut(s) 409
PspPI GGNCC 3 cut(s) 379, 560, 683
PstI CTGCAG 1 cut(s) 670
PstNI CAGNNNCTG 2 cut(s) 515, 577
PvuI CGATCG 1 cut(s) 436
RsaI GTAC 3 cut(s) 318, 323, 401
RsaNI GTAC 3 cut(s) 317, 322, 400
RseI CAYNNNNRTG 2 cut(s) 719, 742
SapI GCTCTTC 1 cut(s) 187
SaqAI TTAA 2 cut(s) 171, 552
SatI GCNGC 3 cut(s) 190, 310, 669
Sau3AI GATC 1 cut(s) 433
Sau96I GGNCC 3 cut(s) 379, 560, 683
SchI GAGTC 1 cut(s) 140
ScrFI CCNGG 2 cut(s) 378, 411
SetI ASST 4 cut(s) 246, 280, 415, 498
SfaNI GCATC 3 cut(s) 6, 522, 564
SfcI CTRYAG 1 cut(s) 666
SfuI TTCGAA 1 cut(s) 214
SmiMI CAYNNNNRTG 2 cut(s) 719, 742
SmlI CTYRAG 2 cut(s) 482, 524
SmoI CTYRAG 2 cut(s) 482, 524
Sse9I AATT 4 cut(s) 24, 350, 542, 633
SsiI CCGC 3 cut(s) 190, 394, 735
StyD4I CCNGG 2 cut(s) 376, 409
TaaI ACNGT 3 cut(s) 176, 294, 321
TaiI ACGT 1 cut(s) 498
TaqI TCGA 3 cut(s) 10, 214, 432
TaqII GACCGA 1 cut(s) 97
TasI AATT 4 cut(s) 24, 350, 542, 633
TatI WGTACW 1 cut(s) 399
TauI GCSGC 1 cut(s) 192
Tru1I TTAA 2 cut(s) 171, 552
Tru9I TTAA 2 cut(s) 171, 552
TscAI CASTG 2 cut(s) 670, 726
TseFI GTSAC 1 cut(s) 109
TseI GCWGC 2 cut(s) 309, 668
Tsp45I GTSAC 1 cut(s) 109
TspDTI ATGAA 2 cut(s) 379, 405
TspRI CASTG 2 cut(s) 670, 726
XagI CCTNNNNNAGG 1 cut(s) 482
XapI RAATTY 2 cut(s) 350, 542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.