Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

60203692 .. 60205782

Gene Structure 2091 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00327460.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2091 bp

ATGAAACCAATCATCACTCTTCTCTACCTCTCCTTGTTTCTCCACATCCTCACTCTCTTCGTCGCCGGTCAGTCGCCACCATACACTCCGGTCGACAATATCACCCTCGCCTGCGGCAATTCCGGCCAACCGAGCTCCAATGACCTCAGAAAGTGGAGTGGAGATATCGACTCAAAATTCACCCCAATAGGTAACGCATCCCAATCCATAGATGCACCGCTGTCGTCCACCGCCAGCGACGTCCCTTACACCAAAGCTCGGCTCTCTCGCTCCAAATTCACTTACACAACTCCCCTCTCTCCCGGCCAAAAGTTCATCCGCTTGCATTTCAATCCAGATACATACAACCCGGACTTCCAACGCTCCAACTCCCTCTTCTCCGTCACCGCCGCCGGCTTCACTGTCCTCAAAGACTTCAACGCCTCCGTCACGGCCGACTCTTCCGGCGAGTCCCCGCTGGTCAGAGAATTCTGTGTAAACATCGAGACAGGAGAGAGACTCAACATCACCTTCACACCAAGCAAAGATGCGTACGCTTTCATCAACGGAATCGAAATCGTGTCCATGCCCACCGGTCTTTACTATACTACTTCAGCTCATCTCATCCACACCAGTAATAGCTCATATCCAATCGGAAACAACACAGCTCTGGAGATGGTGTACCGAATCAACGTCGGCGGAGGCCCCATCTCGCCGATCGCAGACACCGGAATGTACCGGACTTGGGAAACTGCCGACGCTATTTATTTGGACGATATAAGTGAAAAATTGAGCGTGCTACCACAGAACAATACAATCGAGCTCAATTTCGTCAAAGTTCCAGAATACTCTGCCCCAAAATCAGTTTACACAACAGGTCGGTCAATGGGGATGAACAAAACCATCAACAAGAGCTATAACCTCACATGGGTATTTCCCGTAGATCCCAAGTTTTATTACCTGGTGAGACTCCATTTCTGTGAGTTTGAATCTGATATTACCAAGTCCAGAGATCGAGCGTTTCAAATCTTCATGGCCAATCAAACCACAGAAAATATTGCAGATGTTATCCAATGGAGTGGAGCAAATGGGAATCCAGTTTACAGAGACTACATTGTGGGCATGTTCACGTCTCCGGTTGGAAGCCAGAAGAAAGTTAACCTCTTTCTAGAACTTGCAGCGCTACAGAGAGATTCGGATACTAAATACAACGATGCCATCTTGAACGGGCTAGAAATCTTCAAGCTCAGTGACCCGAGTCGGAATCTTGCCGGACCCAACCCCGACCCGCCTCCACTGACGCTGGCGCAGCAAATCCCCAGAAGTTCAACTACAAGTAAATCACATACTTCTTTGCTGCCCATCATAGTTGGTGTACTCTCCGGAGTCCTACTTCTTCTCTCTGTTCTTGGAATTTTAGTTTTCAGGCGAGGAAGGAAAGTCGAGGAGTCTAGTTCCAGCCAGGGAAAGTTGGCTTTACCGTCCTGTTTGTGTCATTACTTTTCACTACCGGAAATGAAAGCCGCCACTCAAAACTTCGATGATTCTCGCATCATTGGAGTTGGAGGGTTTGGCCATGTGTACGAAGGATTTCTTGCGGATGGGGCTACCCATGTTGCAATCAAACGGTTGAAAGCCATGTCATCACAAGGGGCCCGAGAGTTTAGGACGGAAATTGAGATGCTCTCTCGACTTCGTCACCGCCATTTAGTGTCTCTTATTGGATACTGTGCCGATGAAGGTGAGATGATCTTGGTGTATGATTACATGGCACGTGGGACTCTTGGTGACCATCTCCACCGCACTAATAATCCACCTCTTTCGTGGGAACAACGGCTTCAAATTTGTATTGGTGCAGCGCAAGGTTTGCACTATCTACATACAGGTGCTAAGGGCACCATCATTCACCGAGATGTGAAGAGCACAAACATATTATTGGATGAGAAATGGGTAGCCAAAGTTTCAGATTTTGGGTTGTCGAAGAATGGCACAATCACCCTTTCGAAGACCCACATTAGCACAAAGGTGAAGGGTAGTTTCGGATACCTTGACCCCGAATACTATCGACGTCAACAATTGACCGAGAAGTCGATGTGTACTCATTTGGCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

696

Amino Acids

77.07

Weight (kDa)

8.39

Isoelectric Point (pI)

41.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	37 - 408	6.7e-31	Malectin-like domain
Pkinase	PF00069	507 - 689	1.2e-33	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	510 - 690	1.2e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2065
AatII	GACGTC	2 cut(s)	243, 2050
AccB1I	GGYRCC	1 cut(s)	1874
AccI	GTMKAC	1 cut(s)	93
AccIII	TCCGGA	1 cut(s)	1361
AclWI	GGATC	1 cut(s)	917
AcoI	YGGCCR	5 cut(s)	124, 304, 432, 1014, 1552
AcsI	RAATTY	5 cut(s)	176, 275, 467, 1392, 1821
AcuI	CTGAAG	1 cut(s)	576
AcvI	CACGTG	1 cut(s)	1754
AcyI	GRCGYC	2 cut(s)	240, 2047
AfaI	GTAC	6 cut(s)	533, 662, 716, 1356, 1562, 2077
AfeI	AGCGCT	1 cut(s)	1161
AfiI	CCNNNNNNNGG	3 cut(s)	258, 724, 907
AgeI	ACCGGT	1 cut(s)	572
AgsI	TTSAA	9 cut(s)	331, 418, 968, 1004, 1204, 1222, 1308, 1612, 1820
AjiI	CACGTC	1 cut(s)	1110
AjnI	CCWGG	2 cut(s)	939, 1440
AjuI	GAANNNNNNNTTGG	2 cut(s)	359, 391
AleI	CACNNNNGTG	1 cut(s)	2003
AluBI	AGCT	8 cut(s)	135, 257, 596, 621, 647, 802, 894, 1225
AluI	AGCT	8 cut(s)	135, 257, 596, 621, 647, 802, 894, 1225
Alw21I	GWGCWC	3 cut(s)	137, 804, 1904
Alw26I	GTCTC	6 cut(s)	479, 490, 940, 1080, 1116, 1698
AlwI	GGATC	1 cut(s)	917
Ama87I	CYCGRG	2 cut(s)	1234, 1635
Aor13HI	TCCGGA	1 cut(s)	1361
Aor51HI	AGCGCT	1 cut(s)	1161
AoxI	GGCC	7 cut(s)	124, 304, 432, 682, 1014, 1552, 1632
ApaI	GGGCCC	1 cut(s)	1636
ApeKI	GCWGC	4 cut(s)	1157, 1288, 1336, 1835
ApoI	RAATTY	5 cut(s)	176, 275, 467, 1392, 1821
AsiGI	ACCGGT	1 cut(s)	572
Asp700I	GAANNNNTTC	1 cut(s)	1569
AspLEI	GCGC	3 cut(s)	1162, 1288, 1840
AspS9I	GGNCC	4 cut(s)	683, 1253, 1632, 1633
AsuC2I	CCSGG	2 cut(s)	303, 350
AsuII	TTCGAA	1 cut(s)	1982
AvaI	CYCGRG	2 cut(s)	1234, 1635
AvaII	GGWCC	1 cut(s)	1253
BaeGI	GKGCMC	2 cut(s)	1636, 1877
BalI	TGGCCA	2 cut(s)	1016, 1554
BanI	GGYRCC	1 cut(s)	1874
BanII	GRGCYC	3 cut(s)	137, 804, 1636
BarI	GAAGNNNNNNTAC	2 cut(s)	1294, 1326
BbrPI	CACGTG	1 cut(s)	1754
BbsI	GAAGAC	1 cut(s)	1991
Bbv12I	GWGCWC	3 cut(s)	137, 804, 1904
BbvI	GCAGC	4 cut(s)	1169, 1300, 1323, 1847
BccI	CCATC	8 cut(s)	649, 695, 890, 1205, 1349, 1574, 1779, 1886
BceAI	ACGGC	2 cut(s)	447, 1829
BcgI	CGANNNNNNTGC	2 cut(s)	204, 238
BciT130I	CCWGG	2 cut(s)	941, 1442
BciVI	GTATCC	3 cut(s)	1171, 1697, 2015
BcnI	CCSGG	2 cut(s)	303, 350
BcoDI	GTCTC	6 cut(s)	479, 490, 940, 1080, 1116, 1698
BfaI	CTAG	3 cut(s)	1148, 1211, 1431
BfmI	CTRYAG	1 cut(s)	1163
BfoI	RGCGCY	1 cut(s)	1163
BfuI	GTATCC	3 cut(s)	1171, 1697, 2015
BisI	GCNGC	7 cut(s)	115, 390, 1158, 1289, 1337, 1503, 1836
BlsI	GCNGC	7 cut(s)	116, 391, 1159, 1290, 1338, 1504, 1837
Bme1390I	CCNGG	4 cut(s)	303, 350, 941, 1442
Bme18I	GGWCC	1 cut(s)	1253
BmeT110I	CYCGRG	2 cut(s)	1234, 1635
BmgBI	CACGTC	1 cut(s)	1110
BmgT120I	GGNCC	4 cut(s)	683, 1253, 1632, 1633
BmiI	GGNNCC	5 cut(s)	685, 1255, 1633, 1634, 1876
BmrFI	CCNGG	4 cut(s)	303, 350, 941, 1442
BmsI	GCATC	6 cut(s)	202, 206, 517, 1183, 1539, 1650
BoxI	GACNNNNGTC	1 cut(s)	1236
BpiI	GAAGAC	1 cut(s)	1991
BplI	GAGNNNNNCTC	4 cut(s)	483, 515, 1649, 1681
BpmI	CTGGAG	1 cut(s)	671
Bpu10I	CCTNAGC	1 cut(s)	1869
Bpu14I	TTCGAA	1 cut(s)	1982
BpuMI	CCSGG	2 cut(s)	303, 350
BsaAI	YACGTR	1 cut(s)	1754
BsaHI	GRCGYC	2 cut(s)	240, 2047
BsaJI	CCNNGG	1 cut(s)	1441
BsaWI	WCCGGW	7 cut(s)	88, 572, 707, 717, 1114, 1361, 1489
BsaXI	ACNNNNNCTCC	2 cut(s)	644, 674
Bsc4I	CCNNNNNNNGG	3 cut(s)	258, 724, 907
Bse118I	RCCGGY	3 cut(s)	65, 392, 572
Bse1I	ACTGG	2 cut(s)	612, 1076
BseAI	TCCGGA	1 cut(s)	1361
BseBI	CCWGG	2 cut(s)	941, 1442
BseDI	CCNNGG	1 cut(s)	1441
BseGI	GGATG	7 cut(s)	45, 197, 315, 603, 876, 1585, 1924
BseLI	CCNNNNNNNGG	3 cut(s)	258, 724, 907
BseMII	CTCAG	2 cut(s)	160, 1240
BseNI	ACTGG	2 cut(s)	612, 1076
BseRI	GAGGAG	1 cut(s)	1439
BseSI	GKGCMC	2 cut(s)	1636, 1877
BseX3I	CGGCCG	1 cut(s)	432
BseXI	GCAGC	4 cut(s)	1169, 1300, 1323, 1847
BsgI	GTGCAG	1 cut(s)	1854
Bsh1285I	CGRYCG	3 cut(s)	93, 435, 699
BshFI	GGCC	7 cut(s)	126, 306, 434, 684, 1016, 1554, 1634
BshNI	GGYRCC	1 cut(s)	1874
BshTI	ACCGGT	1 cut(s)	572
BsiEI	CGRYCG	3 cut(s)	93, 435, 699
BsiHKAI	GWGCWC	3 cut(s)	137, 804, 1904
BsiHKCI	CYCGRG	2 cut(s)	1234, 1635
BsiWI	CGTACG	1 cut(s)	531
BslFI	GGGAC	3 cut(s)	227, 436, 1771
BslI	CCNNNNNNNGG	3 cut(s)	258, 724, 907
BsmAI	GTCTC	6 cut(s)	479, 490, 940, 1080, 1116, 1698
BsmBI	CGTCTC	1 cut(s)	1116
BsmFI	GGGAC	3 cut(s)	227, 436, 1771
BsnI	GGCC	7 cut(s)	126, 306, 434, 684, 1016, 1554, 1634
BsoBI	CYCGRG	2 cut(s)	1234, 1635
Bsp119I	TTCGAA	1 cut(s)	1982
Bsp120I	GGGCCC	1 cut(s)	1632
Bsp1286I	GDGCHC	5 cut(s)	137, 804, 1636, 1877, 1904
Bsp13I	TCCGGA	1 cut(s)	1361
Bsp143I	GATC	4 cut(s)	696, 922, 991, 1728
BspANI	GGCC	7 cut(s)	126, 306, 434, 684, 1016, 1554, 1634
BspCNI	CTCAG	2 cut(s)	159, 1239
BspEI	TCCGGA	1 cut(s)	1361
BspLI	GGNNCC	5 cut(s)	685, 1255, 1633, 1634, 1876
BspPI	GGATC	1 cut(s)	917
BspQI	GCTCTTC	1 cut(s)	1892
BspT104I	TTCGAA	1 cut(s)	1982
BspT107I	GGYRCC	1 cut(s)	1874
BsrFI	RCCGGY	3 cut(s)	65, 392, 572
BsrI	ACTGG	2 cut(s)	612, 1076
BssAI	RCCGGY	3 cut(s)	65, 392, 572
BssECI	CCNNGG	1 cut(s)	1441
BssMI	GATC	4 cut(s)	696, 922, 991, 1728
BssNI	GRCGYC	2 cut(s)	240, 2047
Bst2UI	CCWGG	2 cut(s)	941, 1442
Bst4CI	ACNGT	4 cut(s)	403, 1461, 1608, 1709
Bst6I	CTCTTC	5 cut(s)	24, 62, 380, 445, 1892
BstACI	GRCGYC	2 cut(s)	240, 2047
BstAPI	GCANNNNNTGC	1 cut(s)	1846
BstBAI	YACGTR	1 cut(s)	1754
BstBI	TTCGAA	1 cut(s)	1982
BstC8I	GCNNGC	6 cut(s)	112, 235, 323, 394, 776, 1284
BstDEI	CTNAG	3 cut(s)	146, 1226, 1869
BstEII	GGTNACC	1 cut(s)	1766
BstF5I	GGATG	7 cut(s)	45, 197, 315, 603, 876, 1585, 1924
BstH2I	RGCGCY	1 cut(s)	1163
BstHHI	GCGC	3 cut(s)	1162, 1288, 1840
BstKTI	GATC	4 cut(s)	699, 925, 994, 1731
BstMAI	GTCTC	6 cut(s)	479, 490, 940, 1080, 1116, 1698
BstMBI	GATC	4 cut(s)	696, 922, 991, 1728
BstMCI	CGRYCG	3 cut(s)	93, 435, 699
BstMWI	GCNNNNNNNGC	5 cut(s)	123, 132, 1288, 1583, 1846
BstNI	CCWGG	2 cut(s)	941, 1442
BstNSI	RCATGY	1 cut(s)	1105
BstPAI	GACNNNNGTC	1 cut(s)	1236
BstPI	GGTNACC	1 cut(s)	1766
BstSCI	CCNGG	4 cut(s)	301, 348, 939, 1440
BstSFI	CTRYAG	1 cut(s)	1163
BstSLI	GKGCMC	2 cut(s)	1636, 1877
BstV1I	GCAGC	4 cut(s)	1169, 1300, 1323, 1847
BstV2I	GAAGAC	1 cut(s)	1991
BstX2I	RGATCY	1 cut(s)	922
BstXI	CCANNNNNNTGG	1 cut(s)	1058
BstYI	RGATCY	1 cut(s)	922
BstZI	CGGCCG	1 cut(s)	432
BsuI	GTATCC	3 cut(s)	1171, 1697, 2015
BsuRI	GGCC	7 cut(s)	126, 306, 434, 684, 1016, 1554, 1634
BtrI	CACGTC	1 cut(s)	1110
BtsCI	GGATG	7 cut(s)	45, 197, 315, 603, 876, 1585, 1924
BtsIMutI	CAGTG	3 cut(s)	399, 1234, 1274
Cac8I	GCNNGC	6 cut(s)	112, 235, 323, 394, 776, 1284
CfoI	GCGC	3 cut(s)	1162, 1288, 1840
Cfr10I	RCCGGY	3 cut(s)	65, 392, 572
Cfr13I	GGNCC	4 cut(s)	683, 1253, 1632, 1633
CseI	GACGC	2 cut(s)	746, 1288
CsiI	ACCWGGT	1 cut(s)	939
Csp6I	GTAC	6 cut(s)	532, 661, 715, 1355, 1561, 2076
CspAI	ACCGGT	1 cut(s)	572
CviAII	CATG	8 cut(s)	565, 906, 1012, 1102, 1556, 1592, 1618, 1747
CviQI	GTAC	6 cut(s)	532, 661, 715, 1355, 1561, 2076
DdeI	CTNAG	3 cut(s)	146, 1226, 1869
DpnI	GATC	4 cut(s)	698, 924, 993, 1730
DpnII	GATC	4 cut(s)	696, 922, 991, 1728
DrdI	GACNNNNNNGTC	1 cut(s)	2065
DseDI	GACNNNNNNGTC	1 cut(s)	2065
EaeI	YGGCCR	5 cut(s)	124, 304, 432, 1014, 1552
EagI	CGGCCG	1 cut(s)	432
Eam1104I	CTCTTC	5 cut(s)	24, 62, 380, 445, 1892
EarI	CTCTTC	5 cut(s)	24, 62, 380, 445, 1892
EciI	GGCGGA	1 cut(s)	693
Ecl136II	GAGCTC	2 cut(s)	135, 802
EclXI	CGGCCG	1 cut(s)	432
Eco24I	GRGCYC	3 cut(s)	137, 804, 1636
Eco32I	GATATC	1 cut(s)	166
Eco47I	GGWCC	1 cut(s)	1253
Eco47III	AGCGCT	1 cut(s)	1161
Eco52I	CGGCCG	1 cut(s)	432
Eco53kI	GAGCTC	2 cut(s)	135, 802
Eco57I	CTGAAG	1 cut(s)	576
Eco72I	CACGTG	1 cut(s)	1754
Eco88I	CYCGRG	2 cut(s)	1234, 1635
Eco91I	GGTNACC	1 cut(s)	1766
EcoICRI	GAGCTC	2 cut(s)	135, 802
EcoO109I	RGGNCCY	2 cut(s)	683, 1632
EcoO65I	GGTNACC	1 cut(s)	1766
EcoRI	GAATTC	1 cut(s)	467
EcoRII	CCWGG	2 cut(s)	939, 1440
EcoRV	GATATC	1 cut(s)	166
EcoT38I	GRGCYC	3 cut(s)	137, 804, 1636
Esp3I	CGTCTC	1 cut(s)	1116
FaeI	CATG	8 cut(s)	568, 909, 1015, 1105, 1559, 1595, 1621, 1750
FalI	AAGNNNNNCTT	2 cut(s)	1557, 1589
FaqI	GGGAC	3 cut(s)	227, 436, 1771
FatI	CATG	8 cut(s)	564, 905, 1011, 1101, 1555, 1591, 1617, 1746
FauI	CCCGC	2 cut(s)	462, 1275
FblI	GTMKAC	1 cut(s)	93
Fnu4HI	GCNGC	7 cut(s)	115, 390, 1158, 1289, 1337, 1503, 1836
FokI	GGATG	7 cut(s)	32, 184, 302, 590, 883, 1592, 1931
FriOI	GRGCYC	3 cut(s)	137, 804, 1636
Fsp4HI	GCNGC	7 cut(s)	115, 390, 1158, 1289, 1337, 1503, 1836
FspBI	CTAG	3 cut(s)	1148, 1211, 1431
GlaI	GCGC	3 cut(s)	1161, 1287, 1839
GluI	GCNGC	7 cut(s)	115, 390, 1158, 1289, 1337, 1503, 1836
GsuI	CTGGAG	1 cut(s)	671
HaeII	RGCGCY	1 cut(s)	1163
HaeIII	GGCC	7 cut(s)	126, 306, 434, 684, 1016, 1554, 1634
HgaI	GACGC	2 cut(s)	746, 1288
HhaI	GCGC	3 cut(s)	1162, 1288, 1840
Hin1I	GRCGYC	2 cut(s)	240, 2047
Hin1II	CATG	8 cut(s)	568, 909, 1015, 1105, 1559, 1595, 1621, 1750
Hin6I	GCGC	3 cut(s)	1160, 1286, 1838
HinP1I	GCGC	3 cut(s)	1160, 1286, 1838
HincII	GTYRAC	3 cut(s)	94, 1138, 2051
HindII	GTYRAC	3 cut(s)	94, 1138, 2051
HpaI	GTTAAC	1 cut(s)	1138
Hpy188I	TCNGA	8 cut(s)	149, 464, 635, 973, 1177, 1242, 1945, 2021
Hpy188III	TCNNGA	9 cut(s)	335, 484, 650, 821, 987, 1148, 1201, 1362, 1668
Hpy99I	CGWCG	5 cut(s)	65, 242, 677, 740, 2049
HpyAV	CCTTC	5 cut(s)	520, 1407, 1559, 1712, 2002
HpyCH4III	ACNGT	4 cut(s)	403, 1461, 1608, 1709
HpyCH4IV	ACGT	5 cut(s)	240, 672, 1109, 1753, 2047
HpyCH4V	TGCA	7 cut(s)	215, 325, 1040, 1157, 1598, 1835, 1849
HpyF10VI	GCNNNNNNNGC	5 cut(s)	123, 132, 1288, 1583, 1846
HpyF3I	CTNAG	3 cut(s)	146, 1226, 1869
HpySE526I	ACGT	5 cut(s)	240, 672, 1109, 1753, 2047
Hsp92I	GRCGYC	2 cut(s)	240, 2047
Hsp92II	CATG	8 cut(s)	568, 909, 1015, 1105, 1559, 1595, 1621, 1750
HspAI	GCGC	3 cut(s)	1160, 1286, 1838
Kpn2I	TCCGGA	1 cut(s)	1361
KroI	GCCGGC	1 cut(s)	392
KroNI	GCCGGC	1 cut(s)	394
KspAI	GTTAAC	1 cut(s)	1138
Kzo9I	GATC	4 cut(s)	696, 922, 991, 1728
LguI	GCTCTTC	1 cut(s)	1892
LmnI	GCTCC	4 cut(s)	140, 275, 368, 1061
Lsp1109I	GCAGC	4 cut(s)	1169, 1300, 1323, 1847
LweI	GCATC	6 cut(s)	202, 206, 517, 1183, 1539, 1650
MabI	ACCWGGT	1 cut(s)	939
MaeI	CTAG	3 cut(s)	1148, 1211, 1431
MaeII	ACGT	5 cut(s)	240, 672, 1109, 1753, 2047
MaeIII	GTNAC	6 cut(s)	191, 382, 427, 1229, 1676, 1766
MalI	GATC	4 cut(s)	698, 924, 993, 1730
MboI	GATC	4 cut(s)	696, 922, 991, 1728
MfeI	CAATTG	1 cut(s)	2054
MflI	RGATCY	1 cut(s)	922
MhlI	GDGCHC	5 cut(s)	137, 804, 1636, 1877, 1904
MlsI	TGGCCA	2 cut(s)	1016, 1554
MluNI	TGGCCA	2 cut(s)	1016, 1554
MlyI	GAGTC	9 cut(s)	164, 431, 458, 492, 942, 1246, 1374, 1436, 1753
MmeI	TCCRAC	5 cut(s)	382, 390, 1099, 1220, 1522
Mox20I	TGGCCA	2 cut(s)	1016, 1554
MroI	TCCGGA	1 cut(s)	1361
MroNI	GCCGGC	1 cut(s)	392
MroXI	GAANNNNTTC	1 cut(s)	1569
MscI	TGGCCA	2 cut(s)	1016, 1554
MseI	TTAA	1 cut(s)	1137
MslI	CAYNNNNRTG	5 cut(s)	710, 957, 1863, 1890, 2003
Msp20I	TGGCCA	2 cut(s)	1016, 1554
MspA1I	CMGCKG	2 cut(s)	220, 457
MspR9I	CCNGG	4 cut(s)	303, 350, 941, 1442
MunI	CAATTG	1 cut(s)	2054
MvaI	CCWGG	2 cut(s)	941, 1442
MwoI	GCNNNNNNNGC	5 cut(s)	123, 132, 1288, 1583, 1846
NaeI	GCCGGC	1 cut(s)	394
NciI	CCSGG	2 cut(s)	303, 350
NdeII	GATC	4 cut(s)	696, 922, 991, 1728
NgoMIV	GCCGGC	1 cut(s)	392
NlaIII	CATG	8 cut(s)	568, 909, 1015, 1105, 1559, 1595, 1621, 1750
NlaIV	GGNNCC	5 cut(s)	685, 1255, 1633, 1634, 1876
NmeAIII	GCCGAG	1 cut(s)	238
NmuCI	GTSAC	5 cut(s)	382, 427, 1229, 1676, 1766
NspI	RCATGY	1 cut(s)	1105
NspV	TTCGAA	1 cut(s)	1982
OliI	CACNNNNGTG	1 cut(s)	2003
PciSI	GCTCTTC	1 cut(s)	1892
PdiI	GCCGGC	1 cut(s)	394
PdmI	GAANNNNTTC	1 cut(s)	1569
PfeI	GAWTC	7 cut(s)	549, 666, 968, 1072, 1172, 1243, 1523
Pfl23II	CGTACG	1 cut(s)	531
PflFI	GACNNNGTC	1 cut(s)	1674
PinAI	ACCGGT	1 cut(s)	572
PkrI	GCNGC	7 cut(s)	116, 391, 1159, 1290, 1338, 1504, 1837
Ple19I	CGATCG	1 cut(s)	699
PleI	GAGTC	9 cut(s)	164, 431, 457, 492, 942, 1245, 1373, 1435, 1753
PmaCI	CACGTG	1 cut(s)	1754
PmlI	CACGTG	1 cut(s)	1754
PpsI	GAGTC	9 cut(s)	164, 431, 457, 492, 942, 1245, 1373, 1435, 1753
Ppu21I	YACGTR	1 cut(s)	1754
PshAI	GACNNNNGTC	1 cut(s)	1236
Psp124BI	GAGCTC	2 cut(s)	137, 804
Psp6I	CCWGG	2 cut(s)	939, 1440
PspCI	CACGTG	1 cut(s)	1754
PspEI	GGTNACC	1 cut(s)	1766
PspGI	CCWGG	2 cut(s)	939, 1440
PspLI	CGTACG	1 cut(s)	531
PspN4I	GGNNCC	5 cut(s)	685, 1255, 1633, 1634, 1876
PspOMI	GGGCCC	1 cut(s)	1632
PspPI	GGNCC	4 cut(s)	683, 1253, 1632, 1633
PsuI	RGATCY	1 cut(s)	922
PsyI	GACNNNGTC	1 cut(s)	1674
PvuI	CGATCG	1 cut(s)	699
RsaI	GTAC	6 cut(s)	533, 662, 716, 1356, 1562, 2077
RsaNI	GTAC	6 cut(s)	532, 661, 715, 1355, 1561, 2076
RseI	CAYNNNNRTG	5 cut(s)	710, 957, 1863, 1890, 2003
SacI	GAGCTC	2 cut(s)	137, 804
SalI	GTCGAC	1 cut(s)	92
SapI	GCTCTTC	1 cut(s)	1892
SaqAI	TTAA	1 cut(s)	1137
SatI	GCNGC	7 cut(s)	115, 390, 1158, 1289, 1337, 1503, 1836
Sau3AI	GATC	4 cut(s)	696, 922, 991, 1728
Sau96I	GGNCC	4 cut(s)	683, 1253, 1632, 1633
SchI	GAGTC	9 cut(s)	164, 431, 458, 492, 942, 1246, 1374, 1436, 1753
ScrFI	CCNGG	4 cut(s)	303, 350, 941, 1442
SduI	GDGCHC	5 cut(s)	137, 804, 1636, 1877, 1904
SexAI	ACCWGGT	1 cut(s)	939
SfaNI	GCATC	6 cut(s)	202, 206, 517, 1183, 1539, 1650
SfcI	CTRYAG	1 cut(s)	1163
SfuI	TTCGAA	1 cut(s)	1982
SinI	GGWCC	1 cut(s)	1253
SmiMI	CAYNNNNRTG	5 cut(s)	710, 957, 1863, 1890, 2003
SspI	AATATT	1 cut(s)	1036
SspMI	CTAG	3 cut(s)	1148, 1211, 1431
SstI	GAGCTC	2 cut(s)	137, 804
StyD4I	CCNGG	4 cut(s)	301, 348, 939, 1440
TaaI	ACNGT	4 cut(s)	403, 1461, 1608, 1709
TaiI	ACGT	5 cut(s)	243, 675, 1112, 1756, 2050
TaqII	GACCGA	2 cut(s)	849, 2075
TatI	WGTACW	2 cut(s)	1354, 2075
TauI	GCSGC	3 cut(s)	117, 392, 1505
TfiI	GAWTC	7 cut(s)	549, 666, 968, 1072, 1172, 1243, 1523
Tru1I	TTAA	1 cut(s)	1137
Tru9I	TTAA	1 cut(s)	1137
TscAI	CASTG	3 cut(s)	406, 1234, 1281
TseFI	GTSAC	5 cut(s)	382, 427, 1229, 1676, 1766
TseI	GCWGC	4 cut(s)	1157, 1288, 1336, 1835
Tsp45I	GTSAC	5 cut(s)	382, 427, 1229, 1676, 1766
TspDTI	ATGAA	7 cut(s)	17, 304, 529, 887, 1000, 1511, 1731
TspGWI	ACGGA	4 cut(s)	370, 415, 561, 1664
TspRI	CASTG	3 cut(s)	406, 1234, 1281
Tth111I	GACNNNGTC	1 cut(s)	1674
VpaK11BI	GGWCC	1 cut(s)	1253
XapI	RAATTY	5 cut(s)	176, 275, 467, 1392, 1821
XbaI	TCTAGA	1 cut(s)	1147
XceI	RCATGY	1 cut(s)	1105
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1800
XmiI	GTMKAC	1 cut(s)	93
XmnI	GAANNNNTTC	1 cut(s)	1569
XspI	CTAG	3 cut(s)	1148, 1211, 1431
ZraI	GACGTC	2 cut(s)	241, 2048

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.