Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

24171482 .. 24173974

Gene Structure 2493 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G251800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGAAGAACCCAAGCAGACGTCTTCATAAGTCCATTACCATGAAACCCATTCTCACTCCTCTGTTCCTTCCCGTGTTTCTGCACATCATCACCGTACACGTGGCCGGTGACACTTCTCCTATCTACACTCCGGTCGACGATATCACCGTTCAATGTGGCTTTTCCGGCCACCAACTCAACACAGAGGATAACAGAACTTGGACTGGAGATATCAACTCAAAGTTCTCCCCCCTTGAAAACCAAGCAGCTGGCCGCTCCTCCACATACAGACAAGCACCTTCTTCCTCACCTGTAAACCAACTACCTTACAGCACCGCTAGGCTTTCTCTCTATGAGTTTACGTACGAATTTCCAGTCACCAGCGGCCAAAAGTTCGTCCGTTTGTATTTCAACCCAGTTTCATATGGCCCTGACTTCGACCCATCCAACGCTCTCTTCTCAGTCACAGCAGGTGGTTTCACCCTTCTCGAAGACTTCAATGCTTCAGTCACTGCTGATGCTTTTGGGTTGGATACAATTTACAGAGAGTTCTGTCTCAACGTTGAGTCAGATGAGAGCTTGAACATTGCTTTCACTCCAACCAGAGCAACCCAAGATACGTATGCTTTTATCAACGGAATTGAAATTGTGTCCATGCCCAACAATCTTTACTACACCTCTGCAGAAAATTCAGATGGAGTTAATTATGTGGGCAGCGACAACACATTTCGGATCGAAAACAGCACTGCGCTGGAGATGGTGTACCGATTCAACGTCGGTGGAAGATCACTGGTTTTCATTCAGGACACTGGTATGTACCGAAACTGGGATGGCGGGCAAAAAGAGAACAAGTACTTAGACGATTTAAGCTATAAGTTTAGTGTTTTACCAGAAAACAGTAGTATCGAACTCAACTTTACTGACATAGCAGAGTACTCTGCTCCAGAAGAACTTTACCATACTGGCCGGTCAATGGGCTTGAACAAGACCATAAACAAGAGCTATAATCTCACCTGGGAGTTCCCTGTCGATCCCAAGTTTTTGTACCTGGTTAGGCTTCATTTTTGTGAGTTTGAACCTAAAATTACCAAGGCCAGAGACCGACAGTTTCAGATCTTCATCGCCAATCAAACAGCTGAACAACTTGCGGACATAATCGAGTGGAGTGGTGGAAATGGAAGACCAATTTACAAGGACTACGTTGTGTTCATGCCTGCAGGCCCTGGAAGCCAGAAGAAAGTTAGTCTCTTTCTCGCACTGCAAGCAAACCCAAAAGATTTTATGACCAACTACAACGATGCAATCTTGAATGGGCTCGAGATCTTCAAACTCAGTGACACAAATCGGAATCTTGCCGGACCCAATCCCGACCCACCTCTTCTAATAACCCCACGAGTGATAGCTCCACCGCAAAGCCGTAAATTTTCGAATAAGAGTTCAACTTCTCTAATTGCTATCATTGCTGGTCTAGTTTCCGGCGTGCTTGTTTTAGGCTCTGTTCTCGGGTTTTTCTTGGTGTTCAGGCGAGGAAGAAAAAACAAGGACTCGAGCTCCAACCAGGGAATGAAATGGGATCCATTTTCTTTTCCGGCGACCCACAGAACATATGGACCGTCTTATTTGTGTCGTTACTTTACACTGGCTGAGATCAAAGCCGCCACTCGAAACTTCGATGACAGTTTTATTATTGGAGTTGGAGGGTTTGGTAACGTGTACAAAGGATGCATTGATGATGGGGCCACTCTCGTTGCAATCAAACGGCTAAAATCTGAGTCATCACAAGGCGCCCACGAGTTCAAGACGGAAATCGAGCTGCTCTCTCAGTTCCGCCACCGCCATTTGGTGTCTCTCATCGGATATTGTAAGGACGGCAATGAGATGGTATTGGTGTACGATTACATGTCACGTGGGACCCTCGACAGCCATCTCTACCACACTGACAACCCCCTCTTTCTTGGGATCAGCGTCTCCAAATTTGTATCGGCGCTGCAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

658

Amino Acids

73.63

Weight (kDa)

6.1

Isoelectric Point (pI)

37.78

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	440
AatII	GACGTC	1 cut(s)	22
Acc36I	ACCTGC	1 cut(s)	440
AccB1I	GGYRCC	1 cut(s)	1763
AccBSI	CCGCTC	1 cut(s)	255
AccI	GTMKAC	1 cut(s)	135
AciI	CCGC	9 cut(s)	253, 315, 363, 813, 1127, 1388, 1635, 1807, 1813
AclI	AACGTT	1 cut(s)	540
AclWI	GGATC	5 cut(s)	719, 1004, 1547, 1560, 1946
AcoI	YGGCCR	5 cut(s)	102, 166, 250, 364, 943
AcsI	RAATTY	4 cut(s)	347, 667, 1400, 1952
AcuI	CTGAAG	1 cut(s)	468
AcvI	CACGTG	2 cut(s)	100, 1886
AcyI	GRCGYC	2 cut(s)	19, 1764
AfaI	GTAC	9 cut(s)	96, 344, 743, 797, 833, 914, 1025, 1694, 1871
AfiI	CCNNNNNNNGG	3 cut(s)	805, 952, 1819
AflIII	ACRYGT	3 cut(s)	97, 1689, 1878
AjnI	CCWGG	4 cut(s)	992, 1026, 1201, 1536
AjuI	GAANNNNNNNTTGG	2 cut(s)	419, 451
AluBI	AGCT	8 cut(s)	248, 558, 849, 981, 1115, 1382, 1530, 1792
AluI	AGCT	8 cut(s)	248, 558, 849, 981, 1115, 1382, 1530, 1792
Alw21I	GWGCWC	1 cut(s)	1532
Alw26I	GTCTC	5 cut(s)	539, 1071, 1229, 1830, 1951
AlwI	GGATC	5 cut(s)	719, 1004, 1547, 1560, 1946
AlwNI	CAGNNNCTG	2 cut(s)	491, 1202
Ama87I	CYCGRG	3 cut(s)	1295, 1481, 1525
AoxI	GGCC	9 cut(s)	102, 166, 250, 364, 406, 943, 1071, 1198, 1716
ApeKI	GCWGC	4 cut(s)	245, 693, 1792, 1966
ApoI	RAATTY	4 cut(s)	347, 667, 1400, 1952
ArsI	GACNNNNNNTTYG	2 cut(s)	339, 371
AspLEI	GCGC	3 cut(s)	730, 1766, 1966
AspS9I	GGNCC	6 cut(s)	407, 1199, 1337, 1589, 1716, 1890
AsuHPI	GGTGA	7 cut(s)	82, 119, 136, 279, 349, 451, 982
AsuII	TTCGAA	1 cut(s)	1406
AvaI	CYCGRG	3 cut(s)	1295, 1481, 1525
AvaII	GGWCC	3 cut(s)	1337, 1589, 1890
BaeI	ACNNNNGTAYC	2 cut(s)	865, 898
BamHI	GGATCC	1 cut(s)	1552
BanI	GGYRCC	1 cut(s)	1763
BanII	GRGCYC	2 cut(s)	1296, 1532
BauI	CACGAG	2 cut(s)	1371, 1769
BbrPI	CACGTG	2 cut(s)	100, 1886
BbsI	GAAGAC	3 cut(s)	14, 477, 1165
Bbv12I	GWGCWC	1 cut(s)	1532
BbvI	GCAGC	4 cut(s)	257, 705, 1779, 1953
BccI	CCATC	7 cut(s)	430, 668, 730, 803, 1706, 1852, 1911
BceAI	ACGGC	3 cut(s)	1380, 1754, 1864
BciT130I	CCWGG	4 cut(s)	994, 1028, 1203, 1538
BciVI	GTATCC	1 cut(s)	505
BcoDI	GTCTC	5 cut(s)	539, 1071, 1229, 1830, 1951
BfaI	CTAG	2 cut(s)	318, 1448
BfmI	CTRYAG	2 cut(s)	660, 1194
BfoI	RGCGCY	2 cut(s)	1767, 1967
BfuAI	ACCTGC	1 cut(s)	440
BfuI	GTATCC	1 cut(s)	505
BglII	AGATCT	2 cut(s)	1092, 1299
BisI	GCNGC	7 cut(s)	246, 253, 364, 694, 1635, 1793, 1967
BlsI	GCNGC	7 cut(s)	247, 254, 365, 695, 1636, 1794, 1968
BmcAI	AGTACT	2 cut(s)	833, 914
Bme1390I	CCNGG	4 cut(s)	994, 1028, 1203, 1538
Bme18I	GGWCC	3 cut(s)	1337, 1589, 1890
BmeT110I	CYCGRG	3 cut(s)	1295, 1481, 1525
BmgT120I	GGNCC	6 cut(s)	407, 1199, 1337, 1589, 1716, 1890
BmiI	GGNNCC	6 cut(s)	1339, 1554, 1717, 1765, 1891, 1892
BmrFI	CCNGG	4 cut(s)	994, 1028, 1203, 1538
BmrI	ACTGGG	2 cut(s)	389, 814
BmsI	GCATC	3 cut(s)	487, 1267, 1691
BmuI	ACTGGG	2 cut(s)	389, 814
BpiI	GAAGAC	3 cut(s)	14, 477, 1165
BplI	GAGNNNNNCTC	2 cut(s)	1781, 1813
BpmI	CTGGAG	3 cut(s)	225, 752, 906
Bpu14I	TTCGAA	1 cut(s)	1406
BsaAI	YACGTR	4 cut(s)	100, 342, 600, 1886
BsaBI	GATNNNNATC	1 cut(s)	1097
BsaHI	GRCGYC	2 cut(s)	19, 1764
BsaI	GGTCTC	1 cut(s)	1071
BsaJI	CCNNGG	4 cut(s)	993, 1068, 1201, 1537
BsaWI	WCCGGW	1 cut(s)	130
BsaXI	ACNNNNNCTCC	4 cut(s)	725, 755, 1514, 1544
Bsc4I	CCNNNNNNNGG	3 cut(s)	805, 952, 1819
Bse118I	RCCGGY	2 cut(s)	104, 945
Bse1I	ACTGG	8 cut(s)	208, 353, 395, 774, 793, 809, 946, 1623
Bse3DI	GCAATG	3 cut(s)	564, 1437, 1858
Bse8I	GATNNNNATC	1 cut(s)	1097
BseBI	CCWGG	4 cut(s)	994, 1028, 1203, 1538
BseDI	CCNNGG	4 cut(s)	993, 1068, 1201, 1537
BseGI	GGATG	3 cut(s)	422, 814, 1706
BseJI	GATNNNNATC	1 cut(s)	1097
BseLI	CCNNNNNNNGG	3 cut(s)	805, 952, 1819
BseMI	GCAATG	3 cut(s)	564, 1437, 1858
BseMII	CTCAG	5 cut(s)	453, 1324, 1614, 1740, 1814
BseNI	ACTGG	8 cut(s)	208, 353, 395, 774, 793, 809, 946, 1623
BseRI	GAGGAG	2 cut(s)	48, 247
BseXI	GCAGC	4 cut(s)	257, 705, 1779, 1953
BsgI	GTGCAG	1 cut(s)	65
Bsh1285I	CGRYCG	1 cut(s)	135
BshFI	GGCC	9 cut(s)	104, 168, 252, 366, 408, 945, 1073, 1200, 1718
BshNI	GGYRCC	1 cut(s)	1763
BsiEI	CGRYCG	1 cut(s)	135
BsiHKAI	GWGCWC	1 cut(s)	1532
BsiHKCI	CYCGRG	3 cut(s)	1295, 1481, 1525
BsiSI	CCGG	7 cut(s)	105, 131, 165, 946, 1335, 1455, 1568
BsiWI	CGTACG	1 cut(s)	342
BslFI	GGGAC	1 cut(s)	1903
BslI	CCNNNNNNNGG	3 cut(s)	805, 952, 1819
BsmAI	GTCTC	5 cut(s)	539, 1071, 1229, 1830, 1951
BsmBI	CGTCTC	1 cut(s)	1951
BsmFI	GGGAC	1 cut(s)	1903
BsnI	GGCC	9 cut(s)	104, 168, 252, 366, 408, 945, 1073, 1200, 1718
Bso31I	GGTCTC	1 cut(s)	1071
BsoBI	CYCGRG	3 cut(s)	1295, 1481, 1525
Bsp119I	TTCGAA	1 cut(s)	1406
Bsp1286I	GDGCHC	2 cut(s)	1296, 1532
Bsp1407I	TGTACA	1 cut(s)	1692
Bsp143I	GATC	8 cut(s)	711, 764, 1009, 1092, 1299, 1552, 1626, 1938
BspACI	CCGC	9 cut(s)	253, 315, 363, 813, 1127, 1388, 1635, 1807, 1813
BspANI	GGCC	9 cut(s)	104, 168, 252, 366, 408, 945, 1073, 1200, 1718
BspCNI	CTCAG	5 cut(s)	452, 1323, 1615, 1741, 1813
BspLI	GGNNCC	6 cut(s)	1339, 1554, 1717, 1765, 1891, 1892
BspMAI	CTGCAG	2 cut(s)	664, 1198
BspMI	ACCTGC	1 cut(s)	440
BspPI	GGATC	5 cut(s)	719, 1004, 1547, 1560, 1946
BspT104I	TTCGAA	1 cut(s)	1406
BspT107I	GGYRCC	1 cut(s)	1763
BspTNI	GGTCTC	1 cut(s)	1071
BsrBI	CCGCTC	1 cut(s)	255
BsrDI	GCAATG	3 cut(s)	564, 1437, 1858
BsrFI	RCCGGY	2 cut(s)	104, 945
BsrGI	TGTACA	1 cut(s)	1692
BsrI	ACTGG	8 cut(s)	208, 353, 395, 774, 793, 809, 946, 1623
BssAI	RCCGGY	2 cut(s)	104, 945
BssECI	CCNNGG	4 cut(s)	993, 1068, 1201, 1537
BssMI	GATC	8 cut(s)	711, 764, 1009, 1092, 1299, 1552, 1626, 1938
BssNI	GRCGYC	2 cut(s)	19, 1764
BssSI	CACGAG	2 cut(s)	1371, 1769
BssT1I	CCWWGG	1 cut(s)	1068
Bst2BI	CACGAG	2 cut(s)	1371, 1769
Bst2UI	CCWGG	4 cut(s)	994, 1028, 1203, 1538
Bst4CI	ACNGT	6 cut(s)	94, 148, 878, 1086, 1593, 1658
Bst6I	CTCTTC	2 cut(s)	440, 1362
BstACI	GRCGYC	2 cut(s)	19, 1764
BstAUI	TGTACA	1 cut(s)	1692
BstBAI	YACGTR	4 cut(s)	100, 342, 600, 1886
BstBI	TTCGAA	1 cut(s)	1406
BstC8I	GCNNGC	6 cut(s)	250, 815, 1194, 1198, 1242, 1460
BstDEI	CTNAG	6 cut(s)	439, 835, 1310, 1623, 1749, 1800
BstF5I	GGATG	3 cut(s)	422, 814, 1706
BstH2I	RGCGCY	2 cut(s)	1767, 1967
BstHHI	GCGC	3 cut(s)	730, 1766, 1966
BstKTI	GATC	8 cut(s)	714, 767, 1012, 1095, 1302, 1555, 1629, 1941
BstMAI	GTCTC	5 cut(s)	539, 1071, 1229, 1830, 1951
BstMBI	GATC	8 cut(s)	711, 764, 1009, 1092, 1299, 1552, 1626, 1938
BstMCI	CGRYCG	1 cut(s)	135
BstMWI	GCNNNNNNNGC	4 cut(s)	165, 1206, 1241, 1439
BstNI	CCWGG	4 cut(s)	994, 1028, 1203, 1538
BstNSI	RCATGY	1 cut(s)	1882
BstSCI	CCNGG	4 cut(s)	992, 1026, 1201, 1536
BstSFI	CTRYAG	2 cut(s)	660, 1194
BstSNI	TACGTA	2 cut(s)	342, 600
BstV1I	GCAGC	4 cut(s)	257, 705, 1779, 1953
BstV2I	GAAGAC	3 cut(s)	14, 477, 1165
BstX2I	RGATCY	3 cut(s)	1092, 1299, 1552
BstXI	CCANNNNNNTGG	1 cut(s)	248
BstYI	RGATCY	3 cut(s)	1092, 1299, 1552
BsuI	GTATCC	1 cut(s)	505
BsuRI	GGCC	9 cut(s)	104, 168, 252, 366, 408, 945, 1073, 1200, 1718
BtgZI	GCGATG	1 cut(s)	1084
BtsCI	GGATG	3 cut(s)	422, 814, 1706
BtsI	GCAGTG	3 cut(s)	489, 723, 1235
BtsIMutI	CAGTG	8 cut(s)	489, 723, 767, 786, 1235, 1318, 1616, 1914
BveI	ACCTGC	1 cut(s)	440
Cac8I	GCNNGC	6 cut(s)	250, 815, 1194, 1198, 1242, 1460
CaiI	CAGNNNCTG	2 cut(s)	491, 1202
CfoI	GCGC	3 cut(s)	730, 1766, 1966
Cfr10I	RCCGGY	2 cut(s)	104, 945
Cfr13I	GGNCC	6 cut(s)	407, 1199, 1337, 1589, 1716, 1890
CseI	GACGC	1 cut(s)	1933
CsiI	ACCWGGT	1 cut(s)	1026
Csp6I	GTAC	9 cut(s)	95, 343, 742, 796, 832, 913, 1024, 1693, 1870
CspCI	CAANNNNNGTGG	4 cut(s)	739, 774, 1708, 1743
CviAII	CATG	4 cut(s)	40, 634, 1189, 1879
CviQI	GTAC	9 cut(s)	95, 343, 742, 796, 832, 913, 1024, 1693, 1870
DdeI	CTNAG	6 cut(s)	439, 835, 1310, 1623, 1749, 1800
DinI	GGCGCC	1 cut(s)	1765
DpnI	GATC	8 cut(s)	713, 766, 1011, 1094, 1301, 1554, 1628, 1940
DpnII	GATC	8 cut(s)	711, 764, 1009, 1092, 1299, 1552, 1626, 1938
EaeI	YGGCCR	5 cut(s)	102, 166, 250, 364, 943
Eam1104I	CTCTTC	2 cut(s)	440, 1362
EarI	CTCTTC	2 cut(s)	440, 1362
EciI	GGCGGA	1 cut(s)	1796
Ecl136II	GAGCTC	1 cut(s)	1530
Eco105I	TACGTA	2 cut(s)	342, 600
Eco130I	CCWWGG	1 cut(s)	1068
Eco24I	GRGCYC	2 cut(s)	1296, 1532
Eco31I	GGTCTC	1 cut(s)	1071
Eco32I	GATATC	2 cut(s)	142, 211
Eco47I	GGWCC	3 cut(s)	1337, 1589, 1890
Eco53kI	GAGCTC	1 cut(s)	1530
Eco57I	CTGAAG	1 cut(s)	468
Eco72I	CACGTG	2 cut(s)	100, 1886
Eco88I	CYCGRG	3 cut(s)	1295, 1481, 1525
EcoICRI	GAGCTC	1 cut(s)	1530
EcoO109I	RGGNCCY	2 cut(s)	1199, 1890
EcoRII	CCWGG	4 cut(s)	992, 1026, 1201, 1536
EcoRV	GATATC	2 cut(s)	142, 211
EcoT14I	CCWWGG	1 cut(s)	1068
EcoT22I	ATGCAT	1 cut(s)	1706
EcoT38I	GRGCYC	2 cut(s)	1296, 1532
EgeI	GGCGCC	1 cut(s)	1765
EheI	GGCGCC	1 cut(s)	1765
ErhI	CCWWGG	1 cut(s)	1068
Esp3I	CGTCTC	1 cut(s)	1951
FaeI	CATG	4 cut(s)	43, 637, 1192, 1882
FaqI	GGGAC	1 cut(s)	1903
FatI	CATG	4 cut(s)	39, 633, 1188, 1878
FauI	CCCGC	1 cut(s)	806
FauNDI	CATATG	2 cut(s)	403, 1585
FblI	GTMKAC	1 cut(s)	135
Fnu4HI	GCNGC	7 cut(s)	246, 253, 364, 694, 1635, 1793, 1967
FokI	GGATG	3 cut(s)	409, 821, 1713
FriOI	GRGCYC	2 cut(s)	1296, 1532
Fsp4HI	GCNGC	7 cut(s)	246, 253, 364, 694, 1635, 1793, 1967
FspBI	CTAG	2 cut(s)	318, 1448
GlaI	GCGC	3 cut(s)	729, 1765, 1965
GluI	GCNGC	7 cut(s)	246, 253, 364, 694, 1635, 1793, 1967
GsuI	CTGGAG	3 cut(s)	225, 752, 906
HaeII	RGCGCY	2 cut(s)	1767, 1967
HaeIII	GGCC	9 cut(s)	104, 168, 252, 366, 408, 945, 1073, 1200, 1718
HapII	CCGG	7 cut(s)	105, 131, 165, 946, 1335, 1455, 1568
HgaI	GACGC	1 cut(s)	1933
HhaI	GCGC	3 cut(s)	730, 1766, 1966
Hin1I	GRCGYC	2 cut(s)	19, 1764
Hin1II	CATG	4 cut(s)	43, 637, 1192, 1882
Hin6I	GCGC	3 cut(s)	728, 1764, 1964
HinP1I	GCGC	3 cut(s)	728, 1764, 1964
HincII	GTYRAC	1 cut(s)	136
HindII	GTYRAC	1 cut(s)	136
HinfI	GANTC	5 cut(s)	545, 747, 1327, 1523, 1751
HpaII	CCGG	7 cut(s)	105, 131, 165, 946, 1335, 1455, 1568
HphI	GGTGA	7 cut(s)	82, 119, 136, 279, 349, 451, 982
Hpy166II	GTNNAC	7 cut(s)	97, 136, 295, 339, 742, 1693, 1870
Hpy188I	TCNGA	7 cut(s)	550, 673, 711, 1092, 1326, 1750, 1835
Hpy188III	TCNNGA	7 cut(s)	467, 782, 923, 1285, 1297, 1346, 1777
Hpy8I	GTNNAC	7 cut(s)	97, 136, 295, 339, 742, 1693, 1870
Hpy99I	CGWCG	2 cut(s)	140, 758
HpyAV	CCTTC	3 cut(s)	77, 288, 473
HpyCH4III	ACNGT	6 cut(s)	94, 148, 878, 1086, 1593, 1658
HpyCH4IV	ACGT	9 cut(s)	19, 99, 341, 540, 599, 753, 1179, 1689, 1885
HpyCH4V	TGCA	8 cut(s)	82, 662, 1196, 1240, 1280, 1704, 1730, 1969
HpyF10VI	GCNNNNNNNGC	4 cut(s)	165, 1206, 1241, 1439
HpyF3I	CTNAG	6 cut(s)	439, 835, 1310, 1623, 1749, 1800
HpySE526I	ACGT	9 cut(s)	19, 99, 341, 540, 599, 753, 1179, 1689, 1885
Hsp92I	GRCGYC	2 cut(s)	19, 1764
Hsp92II	CATG	4 cut(s)	43, 637, 1192, 1882
HspAI	GCGC	3 cut(s)	728, 1764, 1964
KasI	GGCGCC	1 cut(s)	1763
KflI	GGGWCCC	1 cut(s)	1890
Kzo9I	GATC	8 cut(s)	711, 764, 1009, 1092, 1299, 1552, 1626, 1938
LmnI	GCTCC	4 cut(s)	260, 925, 1387, 1535
Lsp1109I	GCAGC	4 cut(s)	257, 705, 1779, 1953
LweI	GCATC	3 cut(s)	487, 1267, 1691
MabI	ACCWGGT	1 cut(s)	1026
MaeI	CTAG	2 cut(s)	318, 1448
MaeII	ACGT	9 cut(s)	19, 99, 341, 540, 599, 753, 1179, 1689, 1885
MaeIII	GTNAC	8 cut(s)	107, 355, 442, 487, 1313, 1607, 1685, 1881
MalI	GATC	8 cut(s)	713, 766, 1011, 1094, 1301, 1554, 1628, 1940
MbiI	CCGCTC	1 cut(s)	255
MboI	GATC	8 cut(s)	711, 764, 1009, 1092, 1299, 1552, 1626, 1938
MflI	RGATCY	3 cut(s)	1092, 1299, 1552
MhlI	GDGCHC	2 cut(s)	1296, 1532
Mly113I	GGCGCC	1 cut(s)	1764
MlyI	GAGTC	3 cut(s)	554, 1517, 1760
MmeI	TCCRAC	5 cut(s)	450, 489, 602, 1557, 1654
Mph1103I	ATGCAT	1 cut(s)	1706
MseI	TTAA	2 cut(s)	681, 845
MslI	CAYNNNNRTG	3 cut(s)	38, 791, 1044
MspA1I	CMGCKG	3 cut(s)	248, 363, 1115
MspI	CCGG	7 cut(s)	105, 131, 165, 946, 1335, 1455, 1568
MspR9I	CCNGG	4 cut(s)	994, 1028, 1203, 1538
MvaI	CCWGG	4 cut(s)	994, 1028, 1203, 1538
MwoI	GCNNNNNNNGC	4 cut(s)	165, 1206, 1241, 1439
NarI	GGCGCC	1 cut(s)	1764
NdeI	CATATG	2 cut(s)	403, 1585
NdeII	GATC	8 cut(s)	711, 764, 1009, 1092, 1299, 1552, 1626, 1938
NlaIII	CATG	4 cut(s)	43, 637, 1192, 1882
NlaIV	GGNNCC	6 cut(s)	1339, 1554, 1717, 1765, 1891, 1892
NmuCI	GTSAC	6 cut(s)	107, 355, 442, 487, 1313, 1881
NsiI	ATGCAT	1 cut(s)	1706
NspI	RCATGY	1 cut(s)	1882
NspV	TTCGAA	1 cut(s)	1406
PaeR7I	CTCGAG	2 cut(s)	1295, 1525
PaqCI	CACCTGC	1 cut(s)	440
PciI	ACATGT	1 cut(s)	1878
PcsI	WCGNNNNNNNCGW	1 cut(s)	144
PfeI	GAWTC	2 cut(s)	747, 1327
Pfl23II	CGTACG	1 cut(s)	342
PkrI	GCNGC	7 cut(s)	247, 254, 365, 695, 1636, 1794, 1968
PleI	GAGTC	3 cut(s)	553, 1517, 1759
PluTI	GGCGCC	1 cut(s)	1767
PmaCI	CACGTG	2 cut(s)	100, 1886
PmlI	CACGTG	2 cut(s)	100, 1886
PpsI	GAGTC	3 cut(s)	553, 1517, 1759
Ppu21I	YACGTR	4 cut(s)	100, 342, 600, 1886
PpuMI	RGGWCCY	1 cut(s)	1890
PscI	ACATGT	1 cut(s)	1878
Psp124BI	GAGCTC	1 cut(s)	1532
Psp1406I	AACGTT	1 cut(s)	540
Psp5II	RGGWCCY	1 cut(s)	1890
Psp6I	CCWGG	4 cut(s)	992, 1026, 1201, 1536
PspCI	CACGTG	2 cut(s)	100, 1886
PspGI	CCWGG	4 cut(s)	992, 1026, 1201, 1536
PspLI	CGTACG	1 cut(s)	342
PspN4I	GGNNCC	6 cut(s)	1339, 1554, 1717, 1765, 1891, 1892
PspPI	GGNCC	6 cut(s)	407, 1199, 1337, 1589, 1716, 1890
PspPPI	RGGWCCY	1 cut(s)	1890
PspXI	VCTCGAGB	1 cut(s)	1525
PstI	CTGCAG	2 cut(s)	664, 1198
PstNI	CAGNNNCTG	2 cut(s)	491, 1202
PsuI	RGATCY	3 cut(s)	1092, 1299, 1552
PvuII	CAGCTG	2 cut(s)	248, 1115
RsaI	GTAC	9 cut(s)	96, 344, 743, 797, 833, 914, 1025, 1694, 1871
RsaNI	GTAC	9 cut(s)	95, 343, 742, 796, 832, 913, 1024, 1693, 1870
RseI	CAYNNNNRTG	3 cut(s)	38, 791, 1044
SacI	GAGCTC	1 cut(s)	1532
SalI	GTCGAC	1 cut(s)	134
SaqAI	TTAA	2 cut(s)	681, 845
SatI	GCNGC	7 cut(s)	246, 253, 364, 694, 1635, 1793, 1967
Sau3AI	GATC	8 cut(s)	711, 764, 1009, 1092, 1299, 1552, 1626, 1938
Sau96I	GGNCC	6 cut(s)	407, 1199, 1337, 1589, 1716, 1890
SbfI	CCTGCAGG	1 cut(s)	1198
ScaI	AGTACT	2 cut(s)	833, 914
SchI	GAGTC	3 cut(s)	554, 1517, 1760
ScrFI	CCNGG	4 cut(s)	994, 1028, 1203, 1538
SdaI	CCTGCAGG	1 cut(s)	1198
SduI	GDGCHC	2 cut(s)	1296, 1532
SexAI	ACCWGGT	1 cut(s)	1026
SfaNI	GCATC	3 cut(s)	487, 1267, 1691
SfcI	CTRYAG	2 cut(s)	660, 1194
SfoI	GGCGCC	1 cut(s)	1765
Sfr274I	CTCGAG	2 cut(s)	1295, 1525
SfuI	TTCGAA	1 cut(s)	1406
SinI	GGWCC	3 cut(s)	1337, 1589, 1890
SlaI	CTCGAG	2 cut(s)	1295, 1525
SmiMI	CAYNNNNRTG	3 cut(s)	38, 791, 1044
SmlI	CTYRAG	2 cut(s)	1295, 1525
SmoI	CTYRAG	2 cut(s)	1295, 1525
SnaBI	TACGTA	2 cut(s)	342, 600
Sse8387I	CCTGCAGG	1 cut(s)	1198
SsiI	CCGC	9 cut(s)	253, 315, 363, 813, 1127, 1388, 1635, 1807, 1813
SspDI	GGCGCC	1 cut(s)	1763
SspMI	CTAG	2 cut(s)	318, 1448
SstI	GAGCTC	1 cut(s)	1532
StyD4I	CCNGG	4 cut(s)	992, 1026, 1201, 1536
StyI	CCWWGG	1 cut(s)	1068
TaaI	ACNGT	6 cut(s)	94, 148, 878, 1086, 1593, 1658
TaiI	ACGT	9 cut(s)	22, 102, 344, 543, 602, 756, 1182, 1692, 1888
TaqII	GACCGA	1 cut(s)	1095
TatI	WGTACW	3 cut(s)	831, 912, 1692
TauI	GCSGC	3 cut(s)	255, 366, 1637
TfiI	GAWTC	2 cut(s)	747, 1327
Tru1I	TTAA	2 cut(s)	681, 845
Tru9I	TTAA	2 cut(s)	681, 845
TscAI	CASTG	8 cut(s)	496, 730, 774, 793, 1242, 1318, 1623, 1921
TseFI	GTSAC	6 cut(s)	107, 355, 442, 487, 1313, 1881
TseI	GCWGC	4 cut(s)	245, 693, 1792, 1966
Tsp45I	GTSAC	6 cut(s)	107, 355, 442, 487, 1313, 1881
TspDTI	ATGAA	9 cut(s)	14, 17, 56, 390, 766, 1028, 1087, 1177, 1559
TspGWI	ACGGA	3 cut(s)	368, 630, 1796
TspRI	CASTG	8 cut(s)	496, 730, 774, 793, 1242, 1318, 1623, 1921
VpaK11BI	GGWCC	3 cut(s)	1337, 1589, 1890
XapI	RAATTY	4 cut(s)	347, 667, 1400, 1952
XceI	RCATGY	1 cut(s)	1882
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1583
XhoI	CTCGAG	2 cut(s)	1295, 1525
XmiI	GTMKAC	1 cut(s)	135
XspI	CTAG	2 cut(s)	318, 1448
ZraI	GACGTC	1 cut(s)	20
ZrmI	AGTACT	2 cut(s)	833, 914
Zsp2I	ATGCAT	1 cut(s)	1706

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.