Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

35507573 .. 35510167

Gene Structure 2595 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g46610.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2595 bp

ATGCTTGTGATTCCATATCATAAGCAGAGTAGCTTCCCTTGTTTCCAACTTCATCCTCATCCTCTCATCTTTCATCTTACACTACCTACCATGAAACCAATCACCACTCCTCTCTACCTCTCCTTGTTTTTCATCACTCTCTTTCTCACCGGTCAGTCCCAACCATACACTCCGGTCGACAATATCACCCTCGCCTGCGGCAATTCCGGCCAACCGACCAATGATCTGCTCAGAACTTGGACAGGAGATGTCAACTCCAAGTTCACCCCAATAGGTAACGCATCCGAATCCATAACTGCACCTATGTCCTCCACAGCCAGCCAAGTCCCTTACACCAAAGCTCGTCTCTCTCGCTCTGAATTCACTTACACTATTCCCCTCTCTCCCGGCCAAAAGTTCATCCGCTTACATTTCAACCCCGACACATACAACAACAACTTCCAACGCTCCAACTCCCTCTTCTCCGTCACTGCCGCCGGGTTCACTCTCCTCAAAGACTTCAACGCCTCCGTCACCGCCGACGCTTCCGGTGGCTCTCCGCTGGTAAAAGAGTTTTGTGTAAACATCGAGACAGGACAGAGACTCGACATCACCTTCACCCCAAGCAAAGATGCCTACGCTTTCATCAACGGAATCGAAGTTGTGTCCATGCCTACCGGTTTTTACTATACTTCCTCACCTAATTTCATTGACACCAGCGCAAGCTCATATCCAATCAGAAACGACACAGCTCTGGAGATGGTGTACAGAATCAACGTCGGCGGAGGCCCCATAGCGCCGGACGAAGACACAGGAATGTACCGGAATTGGGACTCGGCCGACGATAAATATTTGGATTATCTAAGTAAACAATTCAGCGTGCTTCCACAGAACAATACCATCGAGCTCAACTTCCTCACAGTTCCAGAGTACTCTGCTCCGAAACGGGTTTACACAACAGGTCGGTCAATGGGGATGAACACAACCATCAACAAGAGCTATAACCTCACATGGATATTTCCCTTGGATCCCAAGTTTTATTACCTGGTGAGACTCCATTTCTGTGAGTTTGAATCTGACATTACCGAGGTTGGAGATCGAGCGTTTCAAATCTTCATAGCGAATCAAACCGCAGAACGACTTGCAGATGTTATTGTATGGAGTGGAGCTAATGGGAATCCAGTTTACAGAGACTACGTTGTGGGCATGTTCAAGCCTCCGGTTGGAAGCGAGAAGAAAGTTAATCTCTATCTAGTACTGGCAGCGCTACAGAAATATTCATATACTAAATACAACGATGCCATCTTGAACGGACTAGAAATCTTCAAGCTCAGCGACTCCACTGGAAACCTTGCCGGACCTAACCCCGATCCAAGAACTCAGGTCGACGCACCAAAGGTGCCACCAAAGAGTAGTCCTGGTAAGAAAAAGTCTACTCCTGTGGTTGGTATTATCGCAGGTGTAGCTTCCGGGCTAGTGTTCTCTGTTCTCGGATACATGGTTTTCAGGAGGAGATGGAAAGTCAAGGACTCTGGCTCCTGCAACAAGAGAATGAAGTTTACAACAACCCCCGGGTCATCTTATCGGTGTCGCTGCTTTTCACTAGCAGAGATCAAAGCCGCCACTAAGAACTTCAGTGATGCTTTCATCATTGGAGCTGGAGGATTTGGTAATGTTTACAAAGGATGCATTGATAGTGGAGTTACTCCAGTTGCAATCAAACGACTGAAACCAGAATCATCCCAAGGTGTTCATGAATTTGAGACTGAAATTGAGATGCTCTCCGAACTCCGTCATCGCCACTTGGTTTCACTCATTGGATATTGTACTGATAAAGGAGAGATGATCTTAGTGTATGATTACATGGCACAAGGGACCCTCCGTTCTCATCTCTACCACACTAATAAGCCATCTCTTCCCTGGGACCAACGGCTTCAGATTTGTATCGGTGCAGCTAGAGGATTGCAGTACCTTCATAGTGGCGTGAAGGGCACCATTATTCACCGAGATGTGAAGAGCACAAACATCTTGCTGGATGACAAATGGGTGGCCAAGGTTTCAGATTTCGGGCTGTCCAAAGGCACAACAGACATGTCCACAACTCACATCAGCACGAATGTGAAAGGCAGTTTCGGGTATCTGGACCCAGAATACTACCGACGCCAATGTCTAACTGAGAAGTCAGATGTCTACTCATTTGGTGTAGTTCTGTGTGAGGTATTGTGTGCAAGGGCAGCAGTGATACATACAGAAGAGCTGAAGCAAGCTAGCCTTGCTGAGTGGGCAAAGAGCTGTCATGAGATTGGGGAACTTGATCAGATCATTGATCCAAGTTTGAGAGGTAACATCATAGCTGAGTGCTTGAATAAGTTCACCGATATAGCTATCAGTTGCATGCATGAAAACGGAACAGAACGGCCCTCCATGACTGCTGTTGTTAGGGAGCTTGAACATGCATTGCAGCTTCAGCAAAGTGCAGAAGGAAAAAGCAAGTGCCCTGGAAGGAATGTTGAAACTGAAACAAGCTGTAGTGAGCAAAACTGTGCCACCAACGATTCCATTAAATGTATATCTGCGACAATCTTCTCTGAGATAAACAACCCAAGTGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

865

Amino Acids

95.84

Weight (kDa)

7.74

Isoelectric Point (pI)

41.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	66 - 436	4.1e-30	Malectin-like domain
Pkinase	PF00069	543 - 807	6.6e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	544 - 809	1.2e-50	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1427
AasI	GACNNNNNNGTC	1 cut(s)	2145
Acc36I	ACCTGC	1 cut(s)	1427
AccB1I	GGYRCC	2 cut(s)	1378, 1970
AccI	GTMKAC	4 cut(s)	177, 1365, 1412, 2169
AciI	CCGC	8 cut(s)	198, 403, 474, 516, 539, 762, 1110, 1599
AclWI	GGATC	4 cut(s)	1001, 1014, 1343, 2300
AcoI	YGGCCR	4 cut(s)	208, 388, 816, 2028
AcsI	RAATTY	2 cut(s)	359, 1736
AcuI	CTGAAG	4 cut(s)	1597, 1898, 2258, 2429
AcyI	GRCGYC	1 cut(s)	2140
AfaI	GTAC	6 cut(s)	746, 800, 911, 1236, 1807, 1949
AfeI	AGCGCT	1 cut(s)	1245
AfiI	CCNNNNNNNGG	3 cut(s)	808, 1202, 1424
AflIII	ACRYGT	1 cut(s)	2070
AgeI	ACCGGT	2 cut(s)	149, 656
AjnI	CCWGG	4 cut(s)	1023, 1396, 1898, 2476
AjuI	GAANNNNNNNTTGG	2 cut(s)	443, 475
AleI	CACNNNNGTG	1 cut(s)	2096
AloI	GAACNNNNNNTCC	2 cut(s)	1846, 1878
Alw21I	GWGCWC	2 cut(s)	888, 2000
Alw26I	GTCTC	6 cut(s)	350, 563, 574, 1024, 1164, 1736
AlwI	GGATC	4 cut(s)	1001, 1014, 1343, 2300
Ama87I	CYCGRG	1 cut(s)	1550
Aor51HI	AGCGCT	1 cut(s)	1245
AoxI	GGCC	6 cut(s)	208, 388, 766, 816, 2028, 2396
ApeKI	GCWGC	5 cut(s)	1241, 1572, 1931, 2213, 2440
ApoI	RAATTY	2 cut(s)	359, 1736
AsiGI	ACCGGT	2 cut(s)	149, 656
Asp700I	GAANNNNTTC	1 cut(s)	2348
AspLEI	GCGC	3 cut(s)	701, 778, 1246
AspS9I	GGNCC	6 cut(s)	767, 1337, 1854, 1903, 2122, 2397
AsuC2I	CCSGG	5 cut(s)	387, 478, 1450, 1551, 1552
AsuNHI	GCTAGC	1 cut(s)	2246
AvaI	CYCGRG	1 cut(s)	1550
AvaII	GGWCC	4 cut(s)	1337, 1854, 1903, 2122
BaeGI	GKGCMC	2 cut(s)	1973, 2477
BalI	TGGCCA	1 cut(s)	2030
BamHI	GGATCC	1 cut(s)	1006
BanI	GGYRCC	2 cut(s)	1378, 1970
BanII	GRGCYC	1 cut(s)	888
BbsI	GAAGAC	1 cut(s)	792
Bbv12I	GWGCWC	2 cut(s)	888, 2000
BbvI	GCAGC	5 cut(s)	1253, 1559, 1943, 2225, 2452
BccI	CCATC	6 cut(s)	733, 887, 974, 1289, 1488, 1897
BceAI	ACGGC	2 cut(s)	1925, 2411
BciT130I	CCWGG	4 cut(s)	1025, 1398, 1900, 2478
BciVI	GTATCC	1 cut(s)	1466
BclI	TGATCA	1 cut(s)	2293
BcnI	CCSGG	5 cut(s)	387, 478, 1450, 1551, 1552
BcoDI	GTCTC	6 cut(s)	350, 563, 574, 1024, 1164, 1736
BfaI	CTAG	6 cut(s)	1232, 1295, 1454, 1583, 1935, 2247
BfmI	CTRYAG	2 cut(s)	1247, 2506
BfoI	RGCGCY	2 cut(s)	779, 1247
BfuAI	ACCTGC	1 cut(s)	1427
BfuI	GTATCC	1 cut(s)	1466
BisI	GCNGC	8 cut(s)	199, 474, 1242, 1573, 1599, 1932, 2214, 2441
BlpI	GCTNAGC	1 cut(s)	1310
BlsI	GCNGC	8 cut(s)	200, 475, 1243, 1574, 1600, 1933, 2215, 2442
BmcAI	AGTACT	2 cut(s)	911, 1236
Bme1390I	CCNGG	9 cut(s)	387, 478, 1025, 1398, 1450, 1551, 1552, 1900, 2478
Bme18I	GGWCC	4 cut(s)	1337, 1854, 1903, 2122
BmeT110I	CYCGRG	1 cut(s)	1550
BmgT120I	GGNCC	6 cut(s)	767, 1337, 1854, 1903, 2122, 2397
BmiI	GGNNCC	9 cut(s)	769, 1008, 1380, 1516, 1855, 1856, 1904, 1972, 2124
BmrFI	CCNGG	9 cut(s)	387, 478, 1025, 1398, 1450, 1551, 1552, 1900, 2478
BmsI	GCATC	6 cut(s)	290, 601, 1267, 1609, 1655, 1746
BmtI	GCTAGC	1 cut(s)	2250
BpiI	GAAGAC	1 cut(s)	792
BplI	GAGNNNNNCTC	2 cut(s)	1745, 1777
BpmI	CTGGAG	3 cut(s)	755, 1659, 1671
Bpu1102I	GCTNAGC	1 cut(s)	1310
BpuMI	CCSGG	5 cut(s)	387, 478, 1450, 1551, 1552
BsaBI	GATNNNNATC	1 cut(s)	1922
BsaHI	GRCGYC	1 cut(s)	2140
BsaJI	CCNNGG	9 cut(s)	1002, 1065, 1549, 1550, 1723, 1898, 1899, 2031, 2476
BsaWI	WCCGGW	6 cut(s)	149, 172, 527, 656, 801, 1198
BsaXI	ACNNNNNCTCC	4 cut(s)	728, 758, 1499, 1529
Bsc4I	CCNNNNNNNGG	3 cut(s)	808, 1202, 1424
Bse118I	RCCGGY	2 cut(s)	149, 656
Bse1I	ACTGG	4 cut(s)	1160, 1242, 1327, 1688
Bse3DI	GCAATG	1 cut(s)	2435
Bse8I	GATNNNNATC	1 cut(s)	1922
BseBI	CCWGG	4 cut(s)	1025, 1398, 1900, 2478
BseDI	CCNNGG	9 cut(s)	1002, 1065, 1549, 1550, 1723, 1898, 1899, 2031, 2476
BseGI	GGATG	8 cut(s)	52, 58, 281, 399, 960, 1670, 1718, 2020
BseJI	GATNNNNATC	1 cut(s)	1922
BseLI	CCNNNNNNNGG	3 cut(s)	808, 1202, 1424
BseMI	GCAATG	1 cut(s)	2435
BseMII	CTCAG	7 cut(s)	244, 1324, 1373, 2145, 2247, 2325, 2559
BseNI	ACTGG	4 cut(s)	1160, 1242, 1327, 1688
BseRI	GAGGAG	3 cut(s)	99, 479, 1504
BseSI	GKGCMC	2 cut(s)	1973, 2477
BseX3I	CGGCCG	1 cut(s)	816
BseXI	GCAGC	5 cut(s)	1253, 1559, 1943, 2225, 2452
BsgI	GTGCAG	3 cut(s)	282, 1950, 2475
Bsh1285I	CGRYCG	2 cut(s)	177, 819
BshFI	GGCC	6 cut(s)	210, 390, 768, 818, 2030, 2398
BshNI	GGYRCC	2 cut(s)	1378, 1970
BshTI	ACCGGT	2 cut(s)	149, 656
BsiEI	CGRYCG	2 cut(s)	177, 819
BsiHKAI	GWGCWC	2 cut(s)	888, 2000
BsiHKCI	CYCGRG	1 cut(s)	1550
BslFI	GGGAC	5 cut(s)	142, 311, 824, 1867, 1916
BslI	CCNNNNNNNGG	3 cut(s)	808, 1202, 1424
BsmAI	GTCTC	6 cut(s)	350, 563, 574, 1024, 1164, 1736
BsmBI	CGTCTC	1 cut(s)	350
BsmFI	GGGAC	5 cut(s)	142, 311, 824, 1867, 1916
BsnI	GGCC	6 cut(s)	210, 390, 768, 818, 2030, 2398
BsoBI	CYCGRG	1 cut(s)	1550
Bsp1286I	GDGCHC	4 cut(s)	888, 1973, 2000, 2477
Bsp1407I	TGTACA	1 cut(s)	744
Bsp143I	GATC	9 cut(s)	223, 1006, 1075, 1348, 1590, 1824, 2293, 2298, 2305
Bsp1720I	GCTNAGC	1 cut(s)	1310
BspACI	CCGC	8 cut(s)	198, 403, 474, 516, 539, 762, 1110, 1599
BspANI	GGCC	6 cut(s)	210, 390, 768, 818, 2030, 2398
BspCNI	CTCAG	7 cut(s)	243, 1323, 1372, 2146, 2248, 2326, 2560
BspHI	TCATGA	2 cut(s)	1732, 2275
BspLI	GGNNCC	9 cut(s)	769, 1008, 1380, 1516, 1855, 1856, 1904, 1972, 2124
BspMI	ACCTGC	1 cut(s)	1427
BspOI	GCTAGC	1 cut(s)	2250
BspPI	GGATC	4 cut(s)	1001, 1014, 1343, 2300
BspQI	GCTCTTC	2 cut(s)	1988, 2226
BspT107I	GGYRCC	2 cut(s)	1378, 1970
BsrDI	GCAATG	1 cut(s)	2435
BsrFI	RCCGGY	2 cut(s)	149, 656
BsrGI	TGTACA	1 cut(s)	744
BsrI	ACTGG	4 cut(s)	1160, 1242, 1327, 1688
BssAI	RCCGGY	2 cut(s)	149, 656
BssECI	CCNNGG	9 cut(s)	1002, 1065, 1549, 1550, 1723, 1898, 1899, 2031, 2476
BssMI	GATC	9 cut(s)	223, 1006, 1075, 1348, 1590, 1824, 2293, 2298, 2305
BssNI	GRCGYC	1 cut(s)	2140
BssT1I	CCWWGG	3 cut(s)	1002, 1723, 2031
Bst2UI	CCWGG	4 cut(s)	1025, 1398, 1900, 2478
Bst4CI	ACNGT	2 cut(s)	901, 2522
Bst6I	CTCTTC	4 cut(s)	464, 1899, 1988, 2226
BstACI	GRCGYC	1 cut(s)	2140
BstAUI	TGTACA	1 cut(s)	744
BstC8I	GCNNGC	7 cut(s)	196, 319, 703, 860, 2244, 2248, 2375
BstF5I	GGATG	8 cut(s)	52, 58, 281, 399, 960, 1670, 1718, 2020
BstH2I	RGCGCY	2 cut(s)	779, 1247
BstHHI	GCGC	3 cut(s)	701, 778, 1246
BstKTI	GATC	9 cut(s)	226, 1009, 1078, 1351, 1593, 1827, 2296, 2301, 2308
BstMAI	GTCTC	6 cut(s)	350, 563, 574, 1024, 1164, 1736
BstMBI	GATC	9 cut(s)	223, 1006, 1075, 1348, 1590, 1824, 2293, 2298, 2305
BstMCI	CGRYCG	2 cut(s)	177, 819
BstMWI	GCNNNNNNNGC	7 cut(s)	207, 1442, 1968, 2213, 2252, 2261, 2446
BstNI	CCWGG	4 cut(s)	1025, 1398, 1900, 2478
BstNSI	RCATGY	4 cut(s)	1189, 2074, 2377, 2435
BstSCI	CCNGG	9 cut(s)	385, 476, 1023, 1396, 1448, 1549, 1550, 1898, 2476
BstSFI	CTRYAG	2 cut(s)	1247, 2506
BstSLI	GKGCMC	2 cut(s)	1973, 2477
BstV1I	GCAGC	5 cut(s)	1253, 1559, 1943, 2225, 2452
BstV2I	GAAGAC	1 cut(s)	792
BstX2I	RGATCY	1 cut(s)	1006
BstYI	RGATCY	1 cut(s)	1006
BstZI	CGGCCG	1 cut(s)	816
BsuI	GTATCC	1 cut(s)	1466
BsuRI	GGCC	6 cut(s)	210, 390, 768, 818, 2030, 2398
BtgZI	GCGATG	1 cut(s)	1760
BtsCI	GGATG	8 cut(s)	52, 58, 281, 399, 960, 1670, 1718, 2020
BtsI	GCAGTG	2 cut(s)	468, 2223
BtsIMutI	CAGTG	4 cut(s)	468, 1320, 1621, 2223
BveI	ACCTGC	1 cut(s)	1427
Cac8I	GCNNGC	7 cut(s)	196, 319, 703, 860, 2244, 2248, 2375
CciI	TCATGA	2 cut(s)	1732, 2275
CfoI	GCGC	3 cut(s)	701, 778, 1246
Cfr10I	RCCGGY	2 cut(s)	149, 656
Cfr13I	GGNCC	6 cut(s)	767, 1337, 1854, 1903, 2122, 2397
Cfr9I	CCCGGG	1 cut(s)	1550
CseI	GACGC	3 cut(s)	530, 1376, 2148
CsiI	ACCWGGT	1 cut(s)	1023
Csp6I	GTAC	6 cut(s)	745, 799, 910, 1235, 1806, 1948
CspAI	ACCGGT	2 cut(s)	149, 656
CspCI	CAANNNNNGTGG	1 cut(s)	2566
CviQI	GTAC	6 cut(s)	745, 799, 910, 1235, 1806, 1948
DpnI	GATC	9 cut(s)	225, 1008, 1077, 1350, 1592, 1826, 2295, 2300, 2307
DpnII	GATC	9 cut(s)	223, 1006, 1075, 1348, 1590, 1824, 2293, 2298, 2305
DrdI	GACNNNNNNGTC	1 cut(s)	2145
DseDI	GACNNNNNNGTC	1 cut(s)	2145
EaeI	YGGCCR	4 cut(s)	208, 388, 816, 2028
EagI	CGGCCG	1 cut(s)	816
Eam1104I	CTCTTC	4 cut(s)	464, 1899, 1988, 2226
EarI	CTCTTC	4 cut(s)	464, 1899, 1988, 2226
EciI	GGCGGA	1 cut(s)	777
Ecl136II	GAGCTC	1 cut(s)	886
EclXI	CGGCCG	1 cut(s)	816
Eco130I	CCWWGG	3 cut(s)	1002, 1723, 2031
Eco24I	GRGCYC	1 cut(s)	888
Eco47I	GGWCC	4 cut(s)	1337, 1854, 1903, 2122
Eco47III	AGCGCT	1 cut(s)	1245
Eco52I	CGGCCG	1 cut(s)	816
Eco53kI	GAGCTC	1 cut(s)	886
Eco57I	CTGAAG	4 cut(s)	1597, 1898, 2258, 2429
Eco88I	CYCGRG	1 cut(s)	1550
EcoICRI	GAGCTC	1 cut(s)	886
EcoO109I	RGGNCCY	2 cut(s)	767, 1854
EcoRI	GAATTC	1 cut(s)	359
EcoRII	CCWGG	4 cut(s)	1023, 1396, 1898, 2476
EcoT14I	CCWWGG	3 cut(s)	1002, 1723, 2031
EcoT22I	ATGCAT	3 cut(s)	1670, 2379, 2437
EcoT38I	GRGCYC	1 cut(s)	888
ErhI	CCWWGG	3 cut(s)	1002, 1723, 2031
Esp3I	CGTCTC	1 cut(s)	350
FalI	AAGNNNNNCTT	2 cut(s)	2235, 2267
FaqI	GGGAC	5 cut(s)	142, 311, 824, 1867, 1916
FbaI	TGATCA	1 cut(s)	2293
FblI	GTMKAC	4 cut(s)	177, 1365, 1412, 2169
Fnu4HI	GCNGC	8 cut(s)	199, 474, 1242, 1573, 1599, 1932, 2214, 2441
FokI	GGATG	8 cut(s)	39, 45, 268, 386, 967, 1677, 1705, 2027
FriOI	GRGCYC	1 cut(s)	888
Fsp4HI	GCNGC	8 cut(s)	199, 474, 1242, 1573, 1599, 1932, 2214, 2441
FspBI	CTAG	6 cut(s)	1232, 1295, 1454, 1583, 1935, 2247
GlaI	GCGC	3 cut(s)	700, 777, 1245
GluI	GCNGC	8 cut(s)	199, 474, 1242, 1573, 1599, 1932, 2214, 2441
GsuI	CTGGAG	3 cut(s)	755, 1659, 1671
HaeII	RGCGCY	2 cut(s)	779, 1247
HaeIII	GGCC	6 cut(s)	210, 390, 768, 818, 2030, 2398
HgaI	GACGC	3 cut(s)	530, 1376, 2148
HhaI	GCGC	3 cut(s)	701, 778, 1246
Hin1I	GRCGYC	1 cut(s)	2140
Hin6I	GCGC	3 cut(s)	699, 776, 1244
HinP1I	GCGC	3 cut(s)	699, 776, 1244
HincII	GTYRAC	3 cut(s)	178, 253, 1366
HindII	GTYRAC	3 cut(s)	178, 253, 1366
Hpy188III	TCNNGA	8 cut(s)	568, 734, 905, 1285, 1486, 1733, 2120, 2276
Hpy99I	CGWCG	5 cut(s)	524, 761, 824, 1370, 2142
HpyAV	CCTTC	5 cut(s)	604, 1960, 1961, 2453, 2475
HpyCH4III	ACNGT	2 cut(s)	901, 2522
HpyCH4IV	ACGT	2 cut(s)	756, 1176
HpyF10VI	GCNNNNNNNGC	7 cut(s)	207, 1442, 1968, 2213, 2252, 2261, 2446
HpySE526I	ACGT	2 cut(s)	756, 1176
Hsp92I	GRCGYC	1 cut(s)	2140
HspAI	GCGC	3 cut(s)	699, 776, 1244
KflI	GGGWCCC	1 cut(s)	1854
Ksp22I	TGATCA	1 cut(s)	2293
Kzo9I	GATC	9 cut(s)	223, 1006, 1075, 1348, 1590, 1824, 2293, 2298, 2305
LguI	GCTCTTC	2 cut(s)	1988, 2226
LmnI	GCTCC	6 cut(s)	452, 922, 1145, 1520, 1634, 2422
Lsp1109I	GCAGC	5 cut(s)	1253, 1559, 1943, 2225, 2452
LweI	GCATC	6 cut(s)	290, 601, 1267, 1609, 1655, 1746
MabI	ACCWGGT	1 cut(s)	1023
MaeI	CTAG	6 cut(s)	1232, 1295, 1454, 1583, 1935, 2247
MaeII	ACGT	2 cut(s)	756, 1176
MaeIII	GTNAC	5 cut(s)	275, 466, 511, 1681, 2321
MalI	GATC	9 cut(s)	225, 1008, 1077, 1350, 1592, 1826, 2295, 2300, 2307
MboI	GATC	9 cut(s)	223, 1006, 1075, 1348, 1590, 1824, 2293, 2298, 2305
MboII	GAAGA	9 cut(s)	451, 797, 1084, 1225, 1294, 1886, 2005, 2243, 2554
MflI	RGATCY	1 cut(s)	1006
MhlI	GDGCHC	4 cut(s)	888, 1973, 2000, 2477
MlsI	TGGCCA	1 cut(s)	2030
MluCI	AATT	7 cut(s)	202, 359, 682, 805, 851, 1736, 1749
MluNI	TGGCCA	1 cut(s)	2030
MlyI	GAGTC	5 cut(s)	576, 806, 1026, 1310, 1502
MmeI	TCCRAC	5 cut(s)	70, 466, 474, 1051, 1183
Mox20I	TGGCCA	1 cut(s)	2030
Mph1103I	ATGCAT	3 cut(s)	1670, 2379, 2437
MroXI	GAANNNNTTC	1 cut(s)	2348
MscI	TGGCCA	1 cut(s)	2030
MseI	TTAA	2 cut(s)	1221, 2541
MslI	CAYNNNNRTG	4 cut(s)	794, 1041, 1986, 2096
Msp20I	TGGCCA	1 cut(s)	2030
MspA1I	CMGCKG	1 cut(s)	541
MspR9I	CCNGG	9 cut(s)	387, 478, 1025, 1398, 1450, 1551, 1552, 1900, 2478
MvaI	CCWGG	4 cut(s)	1025, 1398, 1900, 2478
MwoI	GCNNNNNNNGC	7 cut(s)	207, 1442, 1968, 2213, 2252, 2261, 2446
NciI	CCSGG	5 cut(s)	387, 478, 1450, 1551, 1552
NdeII	GATC	9 cut(s)	223, 1006, 1075, 1348, 1590, 1824, 2293, 2298, 2305
NheI	GCTAGC	1 cut(s)	2246
NlaIV	GGNNCC	9 cut(s)	769, 1008, 1380, 1516, 1855, 1856, 1904, 1972, 2124
NmeAIII	GCCGAG	1 cut(s)	794
NmuCI	GTSAC	2 cut(s)	466, 511
NsiI	ATGCAT	3 cut(s)	1670, 2379, 2437
NspI	RCATGY	4 cut(s)	1189, 2074, 2377, 2435
OliI	CACNNNNGTG	1 cut(s)	2096
PaeI	GCATGC	1 cut(s)	2377
PagI	TCATGA	2 cut(s)	1732, 2275
PaqCI	CACCTGC	1 cut(s)	1427
PasI	CCCWGGG	1 cut(s)	1899
PciI	ACATGT	1 cut(s)	2070
PciSI	GCTCTTC	2 cut(s)	1988, 2226
PdmI	GAANNNNTTC	1 cut(s)	2348
PfeI	GAWTC	9 cut(s)	10, 287, 633, 750, 1052, 1102, 1156, 1715, 2534
PinAI	ACCGGT	2 cut(s)	149, 656
PkrI	GCNGC	8 cut(s)	200, 475, 1243, 1574, 1600, 1933, 2215, 2442
PleI	GAGTC	5 cut(s)	576, 806, 1026, 1310, 1502
PpsI	GAGTC	5 cut(s)	576, 806, 1026, 1310, 1502
PpuMI	RGGWCCY	1 cut(s)	1854
PscI	ACATGT	1 cut(s)	2070
Psp124BI	GAGCTC	1 cut(s)	888
Psp5II	RGGWCCY	1 cut(s)	1854
Psp6I	CCWGG	4 cut(s)	1023, 1396, 1898, 2476
PspGI	CCWGG	4 cut(s)	1023, 1396, 1898, 2476
PspN4I	GGNNCC	9 cut(s)	769, 1008, 1380, 1516, 1855, 1856, 1904, 1972, 2124
PspPI	GGNCC	6 cut(s)	767, 1337, 1854, 1903, 2122, 2397
PspPPI	RGGWCCY	1 cut(s)	1854
PsuI	RGATCY	1 cut(s)	1006
RsaI	GTAC	6 cut(s)	746, 800, 911, 1236, 1807, 1949
RsaNI	GTAC	6 cut(s)	745, 799, 910, 1235, 1806, 1948
RseI	CAYNNNNRTG	4 cut(s)	794, 1041, 1986, 2096
SacI	GAGCTC	1 cut(s)	888
SalI	GTCGAC	2 cut(s)	176, 1364
SapI	GCTCTTC	2 cut(s)	1988, 2226
SaqAI	TTAA	2 cut(s)	1221, 2541
SatI	GCNGC	8 cut(s)	199, 474, 1242, 1573, 1599, 1932, 2214, 2441
Sau3AI	GATC	9 cut(s)	223, 1006, 1075, 1348, 1590, 1824, 2293, 2298, 2305
Sau96I	GGNCC	6 cut(s)	767, 1337, 1854, 1903, 2122, 2397
ScaI	AGTACT	2 cut(s)	911, 1236
SchI	GAGTC	5 cut(s)	576, 806, 1026, 1310, 1502
ScrFI	CCNGG	9 cut(s)	387, 478, 1025, 1398, 1450, 1551, 1552, 1900, 2478
SduI	GDGCHC	4 cut(s)	888, 1973, 2000, 2477
SexAI	ACCWGGT	1 cut(s)	1023
SfaNI	GCATC	6 cut(s)	290, 601, 1267, 1609, 1655, 1746
SfcI	CTRYAG	2 cut(s)	1247, 2506
SinI	GGWCC	4 cut(s)	1337, 1854, 1903, 2122
SmaI	CCCGGG	1 cut(s)	1552
SmiMI	CAYNNNNRTG	4 cut(s)	794, 1041, 1986, 2096
SphI	GCATGC	1 cut(s)	2377
Sse9I	AATT	7 cut(s)	202, 359, 682, 805, 851, 1736, 1749
SsiI	CCGC	8 cut(s)	198, 403, 474, 516, 539, 762, 1110, 1599
SspI	AATATT	2 cut(s)	830, 1256
SspMI	CTAG	6 cut(s)	1232, 1295, 1454, 1583, 1935, 2247
SstI	GAGCTC	1 cut(s)	888
StyD4I	CCNGG	9 cut(s)	385, 476, 1023, 1396, 1448, 1549, 1550, 1898, 2476
StyI	CCWWGG	3 cut(s)	1002, 1723, 2031
TaaI	ACNGT	2 cut(s)	901, 2522
TaiI	ACGT	2 cut(s)	759, 1179
TaqI	TCGA	7 cut(s)	177, 567, 585, 636, 882, 1078, 1365
TaqII	GACCGA	1 cut(s)	933
TasI	AATT	7 cut(s)	202, 359, 682, 805, 851, 1736, 1749
TatI	WGTACW	4 cut(s)	744, 909, 1234, 1805
TauI	GCSGC	3 cut(s)	201, 476, 1601
TfiI	GAWTC	9 cut(s)	10, 287, 633, 750, 1052, 1102, 1156, 1715, 2534
Tru1I	TTAA	2 cut(s)	1221, 2541
Tru9I	TTAA	2 cut(s)	1221, 2541
TscAI	CASTG	4 cut(s)	475, 1327, 1621, 2223
TseFI	GTSAC	2 cut(s)	466, 511
TseI	GCWGC	5 cut(s)	1241, 1572, 1931, 2213, 2440
Tsp45I	GTSAC	2 cut(s)	466, 511
TspGWI	ACGGA	7 cut(s)	454, 499, 645, 1305, 1760, 1850, 2400
TspMI	CCCGGG	1 cut(s)	1550
TspRI	CASTG	4 cut(s)	475, 1327, 1621, 2223
VpaK11BI	GGWCC	4 cut(s)	1337, 1854, 1903, 2122
XapI	RAATTY	2 cut(s)	359, 1736
XceI	RCATGY	4 cut(s)	1189, 2074, 2377, 2435
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1896
XmaI	CCCGGG	1 cut(s)	1550
XmiI	GTMKAC	4 cut(s)	177, 1365, 1412, 2169
XmnI	GAANNNNTTC	1 cut(s)	2348
XspI	CTAG	6 cut(s)	1232, 1295, 1454, 1583, 1935, 2247
ZrmI	AGTACT	2 cut(s)	911, 1236
Zsp2I	ATGCAT	3 cut(s)	1670, 2379, 2437

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.