Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

80393880 .. 80400443

Gene Structure 6564 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ53341

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2637 bp

ATGAAACCCATTCTCGCTCTACTTTACCCTTCCAGCTTGTTTCTACTCTCGGTCACCCTACTGGTGGCCGGAGAGTCCACAACCATCTACACTCCGACTGATGATATCACACTTAACTGTGGCTCTTCCGGTCGCATGGTCAGTAACTTTGATTTTCGAACTTGGAGTGGAGATATCAACTCAGAGCTTTCCCCCATAGAAGTTGGCGGTAGCACATCCCGAGGTTTGAAAGCACCACCGTCGTCCTCCACGGGCAGCCAAGTACCGTACACCACAGCACGACTTTCTCACTCGGAATTCAAGTACCGATTTCCCGTCAGACCGGGCCAAAAGTTCATCCGCTTGTACTTCTACCCAGGTTCATACAGTGCCAACTTCGACCGCTCCAAGTCTCTCTTCTCTGTCAAAACGGGTGGCTACACCCTTCTCAAGGACTTCAATGTTTCTATCAGTGCAGATGCTGATTATCTTGAGACAATGCTCAAAGAATTCTGTATTTACATTGAGCCAGAACAACAGATGCTGAACATCACATTCACTCCCAGCAAAGATGGATACGCTTTTATCAACGGGATTGAAATTATGTCCATGCCTGCCTATCTTTACCACACTGCAGCCCAAGACGATGGGCCAAGTATTATCGGCAACGAAAACCGGAACGTCCCAGTGAAAAACCACACGGCTATGGAGATGATCTATCGAATCAACGTCGGCGGAAGTCCAGTCTCACCGAATGAAGACACGGGCATGTACCGCACCTGGGATTCAACGGACGAGATCTACTTAAATAATCCAAGTAGAACTTTGAGCATGTTATCACAAAGCAATAATACTCATCTCAAATTTGCAAAAATACCGAACTACACTGCGCCGGTAGACGTTTACCGAACCGGCCGGTCAATGGAGGTGAACAGAACCATCAGCAAGAGCTACAATCTCACCTGGGGGTTTCCTGTAGATCCACAATTTTATTACCTGGTGAGGCTCCATTTTTGTGAGATTATTTTTAGATTGGAGAGAGATCGTGTGTTTCAGATTTTTATAGCCGACCTACCAGCGGAACAGAGAGCGGACATAATCCAATGGAGTGGAGGAAATGGGATTCCCGTAGGGAAAAATTCACCAACGTCCCCTAAGTGTCCAGACACCGTTGGTGAATTTTTCCCGATTCCCGTATATAGAGACTACCTTGTGTTCGTGCCCAGTCTTCCAAACAAGAAGAAAGTTGACATCTCTGTTGCACTACAAGCAAATCAAGACGATTCGAAAACTCGATATAATAATGCAATCTTGAATGGGCTCGAAATCTTCAAACTGAATGACACAAGCGGAAATCTCGCCGGACCCAATCCCGACCAACCGCCGGCGGCCGACAAGATGAAGCCGGAAAGCCAAAGAAAACCGAAGAAGAAGTCGATTCCTATGCTTGCTATCATTGCCGGCGTAGTTTCCGTCTTACTTGTTCCTTCCCTATTCGGGTTTTTAGTTTTCAGGCGTACAAGAAAACTCAAGGACTCCGGCTCCAGCCACAGGATGACGAAATCAATCACCAACATTGGGTCACATATCCCGTCTTATTTGTGTCGGTACTTTTCACTGGCAGAGATCATAGCCGCCACCAAAAACTTCGATGACACTTTAATCGTTGGGATTGGTGGGTTTGGCCACGTGTATAAAGGACACTTTGATGATGGGGCCACCCTTGTTGCAATCAAACGGCTTAAAGCCACTTCTTCGCAGGGTGCCCACGAGTTCATGACGGAAATCAAGATGCTCTCTCAACTGCGCCATCGTCATTTGGTGTCTCTGATTGGATATTGTGCTGATCAAGGTGAGATGGTTTTAGTGTACGATTACATGTCACGAGGGACCCTCAGTGATCATTTGCACCACATTGAGAAACCGCATCTTCCTTGGGAACGACGACTTCAGATTTGTATCGGTGCAGCTCAAGGTTTGCACTACCTTCATACAGGTTCCAAAGGCACCATCATTCACCGCGACGTAAAGAGCACAAACATATTATTAGACGAGAAATGGGTAGCCAAGGTTTCAGATTTTGGGTTGTCAAAAATGGGCAATATCACAATGTCTAAAACCCACATTAGCACGAAGGTGAAGGGTAGTTTCGGATATGTTGACCCTGATTATTACCGGCGTCAACAATTGACTGAGAAGTCTGACGTGTACTCATTTGGCGTAGTGTTATGCGAAGTATTGTGTGGGAGGCCAGCTGTGACCATTGTGGACAATAATCGAGTTGGCTTGGCTGGATGGGCCAAAAAGTGTCATCGCAATGGGAAATTTGATCAGATTGTTGACCCAAATTTGAAGGGTGAAATTGCAGTGCGATGCTTGCATAAATTTGCTTCCATTGCAATGAGTTGCTTGGATGATAATGGGATCAATCGGCCCTCAATGGATGATGTTGTGAGAGGGCTTCAGTTTGCATTGCAGATGCAGGAAAACAACGAGGATTATATTGATCACATTGAAAGGACGGTTCAACATGAGATTTCATTGATCAAGGACAATGAAGGGTCTTGTTCTAGTGTGCAAAGCAGTGCGGCGAACGAATCCATCCAAGAGTTGACTGGGACCATTTTCTCTGAGATCATTGATCCGGTTGGAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

878

Amino Acids

98.07

Weight (kDa)

8.34

Isoelectric Point (pI)

40.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	78 - 355	9e-23	Malectin-like domain
Malectin	PF11721	232 - 368	1.3e-07	Malectin domain
Pkinase	PF00069	548 - 811	2.1e-42	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	549 - 812	1.3e-46	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Image

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2176
AccB1I	GGYRCC	2 cut(s)	1742, 1985
AccBSI	CCGCTC	2 cut(s)	384, 1070
AccI	GTMKAC	1 cut(s)	876
AccII	CGCG	1 cut(s)	2001
AclWI	GGATC	3 cut(s)	953, 2411, 2615
AcoI	YGGCCR	4 cut(s)	66, 892, 1368, 1663
AcsI	RAATTY	8 cut(s)	296, 488, 842, 1117, 1157, 2303, 2326, 2363
AcuI	CTGAAG	2 cut(s)	1913, 2426
AcvI	CACGTG	1 cut(s)	1669
AcyI	GRCGYC	1 cut(s)	2158
AfaI	GTAC	9 cut(s)	264, 269, 305, 347, 752, 1498, 1589, 1850, 2189
AfiI	CCNNNNNNNGG	9 cut(s)	64, 430, 760, 901, 1057, 1363, 1476, 1530, 1557
AflIII	ACRYGT	3 cut(s)	1668, 1857, 2184
AjiI	CACGTC	1 cut(s)	2185
AjnI	CCWGG	4 cut(s)	355, 758, 941, 975
AjuI	GAANNNNNNNTTGG	2 cut(s)	380, 412
AleI	CACNNNNGTG	1 cut(s)	2114
AluBI	AGCT	5 cut(s)	36, 187, 930, 1949, 2234
AluI	AGCT	5 cut(s)	36, 187, 930, 1949, 2234
Alw21I	GWGCWC	1 cut(s)	2015
Alw26I	GTCTC	5 cut(s)	396, 467, 730, 1176, 1809
AlwI	GGATC	3 cut(s)	953, 2411, 2615
AlwNI	CAGNNNCTG	2 cut(s)	461, 523
Ama87I	CYCGRG	1 cut(s)	219
ApeKI	GCWGC	3 cut(s)	255, 614, 1946
ApoI	RAATTY	8 cut(s)	296, 488, 842, 1117, 1157, 2303, 2326, 2363
ArsI	GACNNNNNNTTYG	4 cut(s)	1397, 1429, 1917, 1949
AspLEI	GCGC	2 cut(s)	871, 1788
AspS9I	GGNCC	8 cut(s)	325, 629, 1343, 1695, 1869, 2277, 2412, 2598
AsuC2I	CCSGG	1 cut(s)	324
AsuII	TTCGAA	2 cut(s)	157, 1265
AvaI	CYCGRG	1 cut(s)	219
AvaII	GGWCC	3 cut(s)	1343, 1869, 2598
BaeGI	GKGCMC	2 cut(s)	1203, 1747
BalI	TGGCCA	1 cut(s)	1665
BanI	GGYRCC	2 cut(s)	1742, 1985
BanII	GRGCYC	1 cut(s)	1302
BauI	CACGAG	2 cut(s)	1748, 1863
BbrPI	CACGTG	1 cut(s)	1669
BbsI	GAAGAC	2 cut(s)	744, 1199
Bbv12I	GWGCWC	1 cut(s)	2015
BbvI	GCAGC	3 cut(s)	267, 626, 1958
BceAI	ACGGC	2 cut(s)	696, 1733
BcgI	CGANNNNNNTGC	4 cut(s)	222, 256, 1405, 1439
BciT130I	CCWGG	4 cut(s)	357, 760, 943, 977
BciVI	GTATCC	1 cut(s)	548
BclI	TGATCA	5 cut(s)	1825, 1879, 2308, 2485, 2523
BcnI	CCSGG	1 cut(s)	324
BcoDI	GTCTC	5 cut(s)	396, 467, 730, 1176, 1809
BfaI	CTAG	1 cut(s)	2550
BfmI	CTRYAG	2 cut(s)	612, 954
BfuI	GTATCC	1 cut(s)	548
BglII	AGATCT	1 cut(s)	777
BisI	GCNGC	6 cut(s)	256, 615, 1368, 1614, 1947, 2568
BlsI	GCNGC	6 cut(s)	257, 616, 1369, 1615, 1948, 2569
Bme1390I	CCNGG	5 cut(s)	324, 357, 760, 943, 977
Bme18I	GGWCC	3 cut(s)	1343, 1869, 2598
BmeT110I	CYCGRG	1 cut(s)	219
BmgBI	CACGTC	1 cut(s)	2185
BmgT120I	GGNCC	8 cut(s)	325, 629, 1343, 1695, 1869, 2277, 2412, 2598
BmrFI	CCNGG	5 cut(s)	324, 357, 760, 943, 977
BmrI	ACTGGG	3 cut(s)	659, 1197, 2604
BmsI	GCATC	6 cut(s)	448, 510, 1761, 1915, 2342, 2448
BmuI	ACTGGG	3 cut(s)	659, 1197, 2604
BpiI	GAAGAC	2 cut(s)	744, 1199
BplI	GAGNNNNNCTC	2 cut(s)	1857, 1889
BpmI	CTGGAG	1 cut(s)	1507
Bpu14I	TTCGAA	2 cut(s)	157, 1265
BpuEI	CTTGAG	4 cut(s)	413, 491, 1493, 1935
BpuMI	CCSGG	1 cut(s)	324
BsaAI	YACGTR	1 cut(s)	1669
BsaBI	GATNNNNATC	1 cut(s)	1937
BsaHI	GRCGYC	1 cut(s)	2158
BsaJI	CCNNGG	7 cut(s)	220, 249, 355, 759, 942, 1913, 2046
BsaWI	WCCGGW	3 cut(s)	128, 654, 2623
BsaXI	ACNNNNNCTCC	4 cut(s)	523, 553, 1505, 1535
Bsc4I	CCNNNNNNNGG	9 cut(s)	64, 430, 760, 901, 1057, 1363, 1476, 1530, 1557
Bse118I	RCCGGY	6 cut(s)	871, 890, 894, 1363, 1439, 2154
Bse1I	ACTGG	6 cut(s)	66, 665, 722, 1203, 1602, 2599
Bse3DI	GCAATG	5 cut(s)	1434, 2302, 2373, 2385, 2450
Bse8I	GATNNNNATC	1 cut(s)	1937
BseBI	CCWGG	4 cut(s)	357, 760, 943, 977
BseDI	CCNNGG	7 cut(s)	220, 249, 355, 759, 942, 1913, 2046
BseGI	GGATG	7 cut(s)	215, 336, 1539, 2279, 2398, 2428, 2580
BseJI	GATNNNNATC	1 cut(s)	1937
BseLI	CCNNNNNNNGG	9 cut(s)	64, 430, 760, 901, 1057, 1363, 1476, 1530, 1557
BseMI	GCAATG	5 cut(s)	1434, 2302, 2373, 2385, 2450
BseMII	CTCAG	4 cut(s)	195, 1888, 2163, 2601
BseNI	ACTGG	6 cut(s)	66, 665, 722, 1203, 1602, 2599
BseSI	GKGCMC	2 cut(s)	1203, 1747
BseX3I	CGGCCG	2 cut(s)	892, 1368
BseXI	GCAGC	3 cut(s)	267, 626, 1958
BseYI	CCCAGC	1 cut(s)	542
BsgI	GTGCAG	2 cut(s)	474, 1965
Bsh1236I	CGCG	1 cut(s)	2001
Bsh1285I	CGRYCG	4 cut(s)	133, 382, 895, 1371
BshNI	GGYRCC	2 cut(s)	1742, 1985
BsiEI	CGRYCG	4 cut(s)	133, 382, 895, 1371
BsiHKAI	GWGCWC	1 cut(s)	2015
BsiHKCI	CYCGRG	1 cut(s)	219
BslFI	GGGAC	4 cut(s)	647, 1114, 1882, 2611
BslI	CCNNNNNNNGG	9 cut(s)	64, 430, 760, 901, 1057, 1363, 1476, 1530, 1557
BsmAI	GTCTC	5 cut(s)	396, 467, 730, 1176, 1809
BsmFI	GGGAC	4 cut(s)	647, 1114, 1882, 2611
BsoBI	CYCGRG	1 cut(s)	219
Bsp119I	TTCGAA	2 cut(s)	157, 1265
Bsp1286I	GDGCHC	4 cut(s)	1203, 1302, 1747, 2015
BspCNI	CTCAG	4 cut(s)	194, 1887, 2164, 2602
BspFNI	CGCG	1 cut(s)	2001
BspHI	TCATGA	1 cut(s)	1755
BspMAI	CTGCAG	1 cut(s)	616
BspPI	GGATC	3 cut(s)	953, 2411, 2615
BspQI	GCTCTTC	1 cut(s)	130
BspT104I	TTCGAA	2 cut(s)	157, 1265
BspT107I	GGYRCC	2 cut(s)	1742, 1985
BsrBI	CCGCTC	2 cut(s)	384, 1070
BsrDI	GCAATG	5 cut(s)	1434, 2302, 2373, 2385, 2450
BsrFI	RCCGGY	6 cut(s)	871, 890, 894, 1363, 1439, 2154
BsrI	ACTGG	6 cut(s)	66, 665, 722, 1203, 1602, 2599
BssAI	RCCGGY	6 cut(s)	871, 890, 894, 1363, 1439, 2154
BssECI	CCNNGG	7 cut(s)	220, 249, 355, 759, 942, 1913, 2046
BssNI	GRCGYC	1 cut(s)	2158
BssSI	CACGAG	2 cut(s)	1748, 1863
BssT1I	CCWWGG	2 cut(s)	1913, 2046
Bst2BI	CACGAG	2 cut(s)	1748, 1863
Bst2UI	CCWGG	4 cut(s)	357, 760, 943, 977
Bst4CI	ACNGT	6 cut(s)	119, 240, 267, 368, 1150, 2503
Bst6I	CTCTTC	2 cut(s)	130, 401
BstACI	GRCGYC	1 cut(s)	2158
BstBAI	YACGTR	1 cut(s)	1669
BstBI	TTCGAA	2 cut(s)	157, 1265
BstC8I	GCNNGC	6 cut(s)	594, 1365, 1428, 1441, 2232, 2357
BstDEI	CTNAG	5 cut(s)	181, 1134, 1874, 2172, 2610
BstDSI	CCRYGG	1 cut(s)	249
BstEII	GGTNACC	1 cut(s)	52
BstENI	CCTNNNNNAGG	1 cut(s)	428
BstF5I	GGATG	7 cut(s)	215, 336, 1539, 2279, 2398, 2428, 2580
BstFNI	CGCG	1 cut(s)	2001
BstHHI	GCGC	2 cut(s)	871, 1788
BstMAI	GTCTC	5 cut(s)	396, 467, 730, 1176, 1809
BstMCI	CGRYCG	4 cut(s)	133, 382, 895, 1371
BstMWI	GCNNNNNNNGC	6 cut(s)	753, 1247, 1436, 2276, 2356, 2375
BstNI	CCWGG	4 cut(s)	357, 760, 943, 977
BstNSI	RCATGY	3 cut(s)	751, 814, 1861
BstPI	GGTNACC	1 cut(s)	52
BstSCI	CCNGG	5 cut(s)	322, 355, 758, 941, 975
BstSFI	CTRYAG	2 cut(s)	612, 954
BstSLI	GKGCMC	2 cut(s)	1203, 1747
BstUI	CGCG	1 cut(s)	2001
BstV1I	GCAGC	3 cut(s)	267, 626, 1958
BstV2I	GAAGAC	2 cut(s)	744, 1199
BstX2I	RGATCY	2 cut(s)	777, 958
BstXI	CCANNNNNNTGG	2 cut(s)	626, 1088
BstYI	RGATCY	2 cut(s)	777, 958
BstZI	CGGCCG	2 cut(s)	892, 1368
BsuI	GTATCC	1 cut(s)	548
BtgI	CCRYGG	1 cut(s)	249
BtgZI	GCGATG	2 cut(s)	2276, 2365
BtrI	CACGTC	1 cut(s)	2185
BtsCI	GGATG	7 cut(s)	215, 336, 1539, 2279, 2398, 2428, 2580
BtsI	GCAGTG	4 cut(s)	609, 864, 2352, 2569
BtsIMutI	CAGTG	9 cut(s)	373, 457, 609, 672, 864, 1595, 1882, 2352, 2569
Cac8I	GCNNGC	6 cut(s)	594, 1365, 1428, 1441, 2232, 2357
CaiI	CAGNNNCTG	2 cut(s)	461, 523
CciI	TCATGA	1 cut(s)	1755
CfoI	GCGC	2 cut(s)	871, 1788
Cfr10I	RCCGGY	6 cut(s)	871, 890, 894, 1363, 1439, 2154
Cfr13I	GGNCC	8 cut(s)	325, 629, 1343, 1695, 1869, 2277, 2412, 2598
CseI	GACGC	1 cut(s)	2147
CsiI	ACCWGGT	1 cut(s)	975
Csp6I	GTAC	9 cut(s)	263, 268, 304, 346, 751, 1497, 1588, 1849, 2188
CspCI	CAANNNNNGTGG	4 cut(s)	394, 429, 1687, 1722
CviAII	CATG	7 cut(s)	136, 589, 748, 811, 1756, 1858, 2510
CviQI	GTAC	9 cut(s)	263, 268, 304, 346, 751, 1497, 1588, 1849, 2188
DdeI	CTNAG	5 cut(s)	181, 1134, 1874, 2172, 2610
DrdI	GACNNNNNNGTC	1 cut(s)	2176
DseDI	GACNNNNNNGTC	1 cut(s)	2176
EaeI	YGGCCR	4 cut(s)	66, 892, 1368, 1663
EagI	CGGCCG	2 cut(s)	892, 1368
Eam1104I	CTCTTC	2 cut(s)	130, 401
EarI	CTCTTC	2 cut(s)	130, 401
EciI	GGCGGA	1 cut(s)	729
EclXI	CGGCCG	2 cut(s)	892, 1368
Eco130I	CCWWGG	2 cut(s)	1913, 2046
Eco24I	GRGCYC	1 cut(s)	1302
Eco32I	GATATC	2 cut(s)	106, 175
Eco47I	GGWCC	3 cut(s)	1343, 1869, 2598
Eco52I	CGGCCG	2 cut(s)	892, 1368
Eco57I	CTGAAG	2 cut(s)	1913, 2426
Eco72I	CACGTG	1 cut(s)	1669
Eco88I	CYCGRG	1 cut(s)	219
Eco91I	GGTNACC	1 cut(s)	52
EcoNI	CCTNNNNNAGG	1 cut(s)	428
EcoO109I	RGGNCCY	1 cut(s)	1869
EcoO65I	GGTNACC	1 cut(s)	52
EcoRI	GAATTC	2 cut(s)	296, 488
EcoRII	CCWGG	4 cut(s)	355, 758, 941, 975
EcoRV	GATATC	2 cut(s)	106, 175
EcoT14I	CCWWGG	2 cut(s)	1913, 2046
EcoT38I	GRGCYC	1 cut(s)	1302
ErhI	CCWWGG	2 cut(s)	1913, 2046
FaeI	CATG	7 cut(s)	139, 592, 751, 814, 1759, 1861, 2513
FalI	AAGNNNNNCTT	4 cut(s)	380, 412, 787, 819
FaqI	GGGAC	4 cut(s)	647, 1114, 1882, 2611
FatI	CATG	7 cut(s)	135, 588, 747, 810, 1755, 1857, 2509
FbaI	TGATCA	5 cut(s)	1825, 1879, 2308, 2485, 2523
FblI	GTMKAC	1 cut(s)	876
Fnu4HI	GCNGC	6 cut(s)	256, 615, 1368, 1614, 1947, 2568
FokI	GGATG	7 cut(s)	202, 323, 1546, 2286, 2405, 2435, 2567
FriOI	GRGCYC	1 cut(s)	1302
Fsp4HI	GCNGC	6 cut(s)	256, 615, 1368, 1614, 1947, 2568
FspBI	CTAG	1 cut(s)	2550
GlaI	GCGC	2 cut(s)	870, 1787
GluI	GCNGC	6 cut(s)	256, 615, 1368, 1614, 1947, 2568
GsaI	CCCAGC	1 cut(s)	546
GsuI	CTGGAG	1 cut(s)	1507
HgaI	GACGC	1 cut(s)	2147
HhaI	GCGC	2 cut(s)	871, 1788
Hin1I	GRCGYC	1 cut(s)	2158
Hin1II	CATG	7 cut(s)	139, 592, 751, 814, 1759, 1861, 2513
Hin6I	GCGC	2 cut(s)	869, 1786
HinP1I	GCGC	2 cut(s)	869, 1786
HincII	GTYRAC	5 cut(s)	1228, 2140, 2162, 2320, 2592
HindII	GTYRAC	5 cut(s)	1228, 2140, 2162, 2320, 2592
HinfI	GANTC	9 cut(s)	74, 702, 764, 1102, 1168, 1262, 1417, 1514, 2576
Hpy99I	CGWCG	4 cut(s)	244, 713, 1926, 2006
HpyAV	CCTTC	8 cut(s)	39, 434, 1476, 1976, 2107, 2113, 2326, 2531
HpyCH4III	ACNGT	6 cut(s)	119, 240, 267, 368, 1150, 2503
HpyCH4IV	ACGT	7 cut(s)	660, 708, 879, 1127, 1668, 2004, 2184
HpyF10VI	GCNNNNNNNGC	6 cut(s)	753, 1247, 1436, 2276, 2356, 2375
HpyF3I	CTNAG	5 cut(s)	181, 1134, 1874, 2172, 2610
HpySE526I	ACGT	7 cut(s)	660, 708, 879, 1127, 1668, 2004, 2184
Hsp92I	GRCGYC	1 cut(s)	2158
Hsp92II	CATG	7 cut(s)	139, 592, 751, 814, 1759, 1861, 2513
HspAI	GCGC	2 cut(s)	869, 1786
KflI	GGGWCCC	1 cut(s)	1869
KroI	GCCGGC	2 cut(s)	1363, 1439
KroNI	GCCGGC	2 cut(s)	1365, 1441
Ksp22I	TGATCA	5 cut(s)	1825, 1879, 2308, 2485, 2523
LguI	GCTCTTC	1 cut(s)	130
LmnI	GCTCC	3 cut(s)	389, 990, 1526
Lsp1109I	GCAGC	3 cut(s)	267, 626, 1958
LweI	GCATC	6 cut(s)	448, 510, 1761, 1915, 2342, 2448
MabI	ACCWGGT	1 cut(s)	975
MaeI	CTAG	1 cut(s)	2550
MaeII	ACGT	7 cut(s)	660, 708, 879, 1127, 1668, 2004, 2184
MaeIII	GTNAC	5 cut(s)	52, 143, 1560, 1860, 2236
MbiI	CCGCTC	2 cut(s)	384, 1070
MfeI	CAATTG	1 cut(s)	2165
MflI	RGATCY	2 cut(s)	777, 958
MhlI	GDGCHC	4 cut(s)	1203, 1302, 1747, 2015
MlsI	TGGCCA	1 cut(s)	1665
MluNI	TGGCCA	1 cut(s)	1665
MlyI	GAGTC	2 cut(s)	83, 1508
MmeI	TCCRAC	2 cut(s)	119, 2608
Mox20I	TGGCCA	1 cut(s)	1665
MreI	CGCCGGCG	1 cut(s)	1363
MroNI	GCCGGC	2 cut(s)	1363, 1439
MscI	TGGCCA	1 cut(s)	1665
MseI	TTAA	4 cut(s)	114, 785, 1640, 1722
MslI	CAYNNNNRTG	7 cut(s)	683, 746, 993, 1686, 2114, 2295, 2378
Msp20I	TGGCCA	1 cut(s)	1665
MspA1I	CMGCKG	2 cut(s)	1058, 2234
MspR9I	CCNGG	5 cut(s)	324, 357, 760, 943, 977
MunI	CAATTG	1 cut(s)	2165
MvaI	CCWGG	4 cut(s)	357, 760, 943, 977
MvnI	CGCG	1 cut(s)	2001
MwoI	GCNNNNNNNGC	6 cut(s)	753, 1247, 1436, 2276, 2356, 2375
NaeI	GCCGGC	2 cut(s)	1365, 1441
NciI	CCSGG	1 cut(s)	324
NgoMIV	GCCGGC	2 cut(s)	1363, 1439
NlaIII	CATG	7 cut(s)	139, 592, 751, 814, 1759, 1861, 2513
NmuCI	GTSAC	4 cut(s)	52, 1560, 1860, 2236
NspI	RCATGY	3 cut(s)	751, 814, 1861
NspV	TTCGAA	2 cut(s)	157, 1265
OliI	CACNNNNGTG	1 cut(s)	2114
PagI	TCATGA	1 cut(s)	1755
PciI	ACATGT	1 cut(s)	1857
PciSI	GCTCTTC	1 cut(s)	130
PdiI	GCCGGC	2 cut(s)	1365, 1441
PfeI	GAWTC	7 cut(s)	702, 764, 1102, 1168, 1262, 1417, 2576
PkrI	GCNGC	6 cut(s)	257, 616, 1369, 1615, 1948, 2569
PleI	GAGTC	2 cut(s)	82, 1508
PmaCI	CACGTG	1 cut(s)	1669
PmlI	CACGTG	1 cut(s)	1669
PpsI	GAGTC	2 cut(s)	82, 1508
Ppu21I	YACGTR	1 cut(s)	1669
PpuMI	RGGWCCY	1 cut(s)	1869
PscI	ACATGT	1 cut(s)	1857
Psp5II	RGGWCCY	1 cut(s)	1869
Psp6I	CCWGG	4 cut(s)	355, 758, 941, 975
PspCI	CACGTG	1 cut(s)	1669
PspEI	GGTNACC	1 cut(s)	52
PspFI	CCCAGC	1 cut(s)	542
PspGI	CCWGG	4 cut(s)	355, 758, 941, 975
PspPI	GGNCC	8 cut(s)	325, 629, 1343, 1695, 1869, 2277, 2412, 2598
PspPPI	RGGWCCY	1 cut(s)	1869
PstI	CTGCAG	1 cut(s)	616
PstNI	CAGNNNCTG	2 cut(s)	461, 523
PsuI	RGATCY	2 cut(s)	777, 958
PvuII	CAGCTG	1 cut(s)	2234
RsaI	GTAC	9 cut(s)	264, 269, 305, 347, 752, 1498, 1589, 1850, 2189
RsaNI	GTAC	9 cut(s)	263, 268, 304, 346, 751, 1497, 1588, 1849, 2188
RseI	CAYNNNNRTG	7 cut(s)	683, 746, 993, 1686, 2114, 2295, 2378
SapI	GCTCTTC	1 cut(s)	130
SaqAI	TTAA	4 cut(s)	114, 785, 1640, 1722
SatI	GCNGC	6 cut(s)	256, 615, 1368, 1614, 1947, 2568
Sau96I	GGNCC	8 cut(s)	325, 629, 1343, 1695, 1869, 2277, 2412, 2598
SchI	GAGTC	2 cut(s)	83, 1508
ScrFI	CCNGG	5 cut(s)	324, 357, 760, 943, 977
SduI	GDGCHC	4 cut(s)	1203, 1302, 1747, 2015
SexAI	ACCWGGT	1 cut(s)	975
SfaNI	GCATC	6 cut(s)	448, 510, 1761, 1915, 2342, 2448
SfcI	CTRYAG	2 cut(s)	612, 954
SfuI	TTCGAA	2 cut(s)	157, 1265
SgrAI	CRCCGGYG	1 cut(s)	1363
SinI	GGWCC	3 cut(s)	1343, 1869, 2598
SmiMI	CAYNNNNRTG	7 cut(s)	683, 746, 993, 1686, 2114, 2295, 2378
SmlI	CTYRAG	4 cut(s)	428, 470, 1508, 1950
SmoI	CTYRAG	4 cut(s)	428, 470, 1508, 1950
SspMI	CTAG	1 cut(s)	2550
StyD4I	CCNGG	5 cut(s)	322, 355, 758, 941, 975
StyI	CCWWGG	2 cut(s)	1913, 2046
TaaI	ACNGT	6 cut(s)	119, 240, 267, 368, 1150, 2503
TaiI	ACGT	7 cut(s)	663, 711, 882, 1130, 1671, 2007, 2187
TaqI	TCGA	9 cut(s)	157, 378, 700, 1265, 1273, 1302, 1415, 1629, 2257
TaqII	GACCGA	1 cut(s)	40
TatI	WGTACW	2 cut(s)	345, 2187
TauI	GCSGC	3 cut(s)	1370, 1616, 2570
TfiI	GAWTC	7 cut(s)	702, 764, 1102, 1168, 1262, 1417, 2576
Tru1I	TTAA	4 cut(s)	114, 785, 1640, 1722
Tru9I	TTAA	4 cut(s)	114, 785, 1640, 1722
TscAI	CASTG	9 cut(s)	373, 457, 616, 672, 871, 1602, 1882, 2352, 2569
TseFI	GTSAC	4 cut(s)	52, 1560, 1860, 2236
TseI	GCWGC	3 cut(s)	255, 614, 1946
Tsp45I	GTSAC	4 cut(s)	52, 1560, 1860, 2236
TspDTI	ATGAA	9 cut(s)	17, 325, 351, 750, 1394, 1744, 1958, 2508, 2550
TspGWI	ACGGA	3 cut(s)	785, 1441, 1775
TspRI	CASTG	9 cut(s)	373, 457, 616, 672, 871, 1602, 1882, 2352, 2569
VpaK11BI	GGWCC	3 cut(s)	1343, 1869, 2598
XagI	CCTNNNNNAGG	1 cut(s)	428
XapI	RAATTY	8 cut(s)	296, 488, 842, 1117, 1157, 2303, 2326, 2363
XceI	RCATGY	3 cut(s)	751, 814, 1861
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2591
XmiI	GTMKAC	1 cut(s)	876
XspI	CTAG	1 cut(s)	2550

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.