Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0010324.1

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

3397 .. 12390

Gene Structure 8994 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0010324.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2814 bp

atgaaaccaattctcgctcctctctaccctttcagcttcctcttcgtcaccctactggtgaccggagagtccacaaccatctactctccaaccgatcatatcaacctgaattgtggctcatccagcgacacggtcactgactatgattctcgaacttggagaggagatataaactcgaatctttccccaatagaagttcgtagtacatccgaggctttgcaagcatcagacagctacacgacttatttggcgccgccgtacgccacagcacggctttctcactcagaattcacttaccggtttcccgtcaatcctggccaaaagttcatccgcttgtatttctacccagattcatacaacgccgacttcgaacactccgagtctctcttctctgtcaaagccggtggctacacccttctcaaagacttcaatgcttctgtcactggagatgctcatggtgattcttctgagaagatgctcaaagaattctgtattaacattgagcaagaacaacaggtgctgaacatcacattcccccccagcaaagatggatacgcgtttatcaacgggattgaaattatgtccatgcctgcctctctttactacactgcagcccatggcgatgggcctagtcttatcggcacccaaaaccggtaccctgtgaaaaacaacaccgctctggagaatatctaccgaatcaacgtcggtggatacaacgacgaaggtggatacccactagtctcaccgaatgaagacaccggcatgtaccgcacctgggattcaagcgacgagatctacttattggattattcaagtttcgggtattattcaaatttcgggtcgacaacatccagatttgaccttctgctcaaatttgcaagaatccctaactacactgccccggaagaggtttaccgaaccggccggtcaatgggggacaaagccatcaacttgagccacaatctcacctggggggttcctgtagatccacaatttaagtacccggtgaggcttcatttttgtgagattgtacccaattatacgatggatggagatcgtgtgtttcagatttttatagataaccaaacagcggagcagaaagcggacataatccaatggagtggaggaaatgggattcccgtatatagagactaccttctgttcgtgcccagtcttccaaacaagaagaaaggtaaagttgatatcattgttgcactacaagcaaattcggaatctcgatataaggatgtaatcttgaatgggctcgaaatcttcaaactgaatgacacaaacggcaatctcgccggacccaatcccgacccgccaccacctccaccgccacctccaccgccgccaccgccaccaccgcgaacaccgccgttctcaatcccgacacaaacggaaaaaccgactttgattcctatgcttgctatccttgctggtgtagtttcggtcttatttgttctttcccttgtcgggtttttagttttgaggcgtggaagaaaactcaaggactccagctccagccacaggatgacaaggccagccatgaccactggatcacatttaccatcttatttgtgtcgttacttttcactggcagagatcaaagccgccaccaaatacttcgatgatactttcattattggagctgggggatttggcaacgtatacaaaggattcatcgatggtggaggcactccagttgcaatcaaacggttgaaagccatgtcatcacaagggtcccgcgagtttaggacggaaattgagatgctctctcgactccgccaccgccatttggtgtctcttatcggattttgtgccgatgaaggtgagatgatcttggtgtacgattacatggcacgtgggactcttcgtgatcatctctaccacactgataatccacctcttccatgggaacatcggcttcaaatttgtattggcgcggcgcaaggtttgcactatcttcacacaggtaccaagggcaccatcattcaccgtgacgtaaagagcacaaacatattattggatgagaaatgggtagccaaggtttcagattttgggttgtcaagaaagggcacaatcaccgtgtccaagacccacattagcacgaaggtgaagggtagttttggatatcttgacccggattactatcgacgtcaacaattaactgagaagtctgatgtgtactccttcggtgtagtgttgtgcgaggtattgtgtggaaggccagctataacaactgtagagaataatcgagttggcttagctggatgggccaagaagtgtcatcataataggaaacttgatcaaattattgacccaaatttaaacggggtcgacacagtgaagctagagaccggagcccacaagctgacggtgatcgggaaagtggacccttcaaagctccgggaacaactcgccagaaagctgaagaagaaggtggacctcatctcgcagcagtccaagaaagagaaagacgacaacagcaacaagaagcagcttgagaaagcagcaaacgacgacaaaaaacccaaagagttgcccaagattccggctcaggtgattccatcgtcggagattgcaaggacgcgtttgcaagtgtggttcatacggatccgccactgcctccccgtcaatgacaagctcgtctcggactatggcacaccgtttcccgagccctgtatcgattgcatcgcccacacggtaggaaagtacgaagctttggcttggctgactggagggctgagctgcttcgttgggttgggcttgttggccgtctggaacgacaaggtcgtctgcttcgttggatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

937

Amino Acids

104.61

Weight (kDa)

8.47

Isoelectric Point (pI)

39.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	67, 2648, 2795
AatII	GACGTC	1 cut(s)	2161
Acc65I	GGTACC	2 cut(s)	654, 1976
AccB1I	GGYRCC	5 cut(s)	250, 641, 654, 1976, 1985
AccBSI	CCGCTC	1 cut(s)	677
AccI	GTMKAC	3 cut(s)	842, 1671, 2340
AccII	CGCG	5 cut(s)	557, 1369, 1749, 1946, 2593
AclWI	GGATC	4 cut(s)	980, 1567, 2611, 2624
AcoI	YGGCCR	3 cut(s)	316, 922, 2775
AcsI	RAATTY	7 cut(s)	287, 485, 832, 872, 1225, 1932, 2326
AcuI	CTGAAG	1 cut(s)	2453
AcvI	CACGTG	1 cut(s)	1865
AcyI	GRCGYC	2 cut(s)	251, 2158
AfiI	CCNNNNNNNGG	9 cut(s)	270, 651, 775, 907, 931, 1090, 1476, 1530, 1798
AflIII	ACRYGT	2 cut(s)	555, 2591
AgeI	ACCGGT	2 cut(s)	297, 651
AhlI	ACTAGT	1 cut(s)	736
AjnI	CCWGG	3 cut(s)	313, 773, 968
AleI	CACNNNNGTG	1 cut(s)	2114
Alw21I	GWGCWC	1 cut(s)	2015
Alw26I	GTCTC	6 cut(s)	387, 745, 1143, 1809, 2351, 2656
AlwI	GGATC	4 cut(s)	980, 1567, 2611, 2624
AlwNI	CAGNNNCTG	1 cut(s)	520
Ama87I	CYCGRG	1 cut(s)	2675
AoxI	GGCC	7 cut(s)	316, 626, 922, 1541, 2228, 2277, 2775
ApeKI	GCWGC	5 cut(s)	611, 2458, 2500, 2513, 2751
ApoI	RAATTY	7 cut(s)	287, 485, 832, 872, 1225, 1932, 2326
ArsI	GACNNNNNNTTYG	2 cut(s)	824, 856
AsiGI	ACCGGT	2 cut(s)	297, 651
Asp718I	GGTACC	2 cut(s)	654, 1976
AspLEI	GCGC	3 cut(s)	253, 1946, 1951
AspS9I	GGNCC	6 cut(s)	626, 1307, 1743, 2277, 2395, 2446
AsuC2I	CCSGG	4 cut(s)	902, 1004, 2144, 2411
AsuII	TTCGAA	1 cut(s)	369
AvaI	CYCGRG	1 cut(s)	2675
AvaII	GGWCC	4 cut(s)	1307, 1743, 2395, 2446
BaeGI	GKGCMC	3 cut(s)	1170, 1988, 2081
BaeI	ACNNNNGTAYC	2 cut(s)	1960, 1993
BalI	TGGCCA	1 cut(s)	318
BamHI	GGATCC	1 cut(s)	2616
BanI	GGYRCC	5 cut(s)	250, 641, 654, 1976, 1985
BanII	GRGCYC	3 cut(s)	1266, 2368, 2682
BbrPI	CACGTG	1 cut(s)	1865
BbsI	GAAGAC	2 cut(s)	759, 1166
Bbv12I	GWGCWC	1 cut(s)	2015
BbvI	GCAGC	5 cut(s)	623, 2470, 2512, 2525, 2738
BceAI	ACGGC	5 cut(s)	241, 287, 1309, 1363, 2762
BciT130I	CCWGG	3 cut(s)	315, 775, 970
BciVI	GTATCC	3 cut(s)	545, 704, 722
BclI	TGATCA	2 cut(s)	1879, 2308
BcnI	CCSGG	4 cut(s)	902, 1004, 2144, 2411
BcoDI	GTCTC	6 cut(s)	387, 745, 1143, 1809, 2351, 2656
BcuI	ACTAGT	1 cut(s)	736
BfaI	CTAG	3 cut(s)	630, 737, 2354
BfmI	CTRYAG	3 cut(s)	609, 981, 2244
BfoI	RGCGCY	1 cut(s)	254
BfuI	GTATCC	3 cut(s)	545, 704, 722
BglII	AGATCT	1 cut(s)	792
BisI	GCNGC	9 cut(s)	254, 612, 1352, 1614, 1947, 2459, 2501, 2514, 2752
BlpI	GCTNAGC	2 cut(s)	2266, 2747
BlsI	GCNGC	9 cut(s)	255, 613, 1353, 1615, 1948, 2460, 2502, 2515, 2753
Bme1390I	CCNGG	7 cut(s)	315, 775, 902, 970, 1004, 2144, 2411
Bme18I	GGWCC	4 cut(s)	1307, 1743, 2395, 2446
BmeT110I	CYCGRG	1 cut(s)	2675
BmgT120I	GGNCC	6 cut(s)	626, 1307, 1743, 2277, 2395, 2446
BmrFI	CCNGG	7 cut(s)	315, 775, 902, 970, 1004, 2144, 2411
BmrI	ACTGGG	1 cut(s)	1164
BmsI	GCATC	5 cut(s)	233, 439, 465, 1761, 2703
BmuI	ACTGGG	1 cut(s)	1164
BpiI	GAAGAC	2 cut(s)	759, 1166
BplI	GAGNNNNNCTC	2 cut(s)	1760, 1792
BpmI	CTGGAG	6 cut(s)	465, 701, 1501, 1507, 1686, 2760
Bpu10I	CCTNAGC	1 cut(s)	2559
Bpu1102I	GCTNAGC	2 cut(s)	2266, 2747
Bpu14I	TTCGAA	1 cut(s)	369
BpuEI	CTTGAG	3 cut(s)	973, 1493, 2525
BpuMI	CCSGG	4 cut(s)	902, 1004, 2144, 2411
Bsa29I	ATCGAT	2 cut(s)	1686, 2688
BsaAI	YACGTR	1 cut(s)	1865
BsaBI	GATNNNNATC	2 cut(s)	1053, 2151
BsaHI	GRCGYC	2 cut(s)	251, 2158
BsaI	GGTCTC	1 cut(s)	2351
BsaJI	CCNNGG	8 cut(s)	210, 616, 774, 900, 969, 1913, 1980, 2046
BsaWI	WCCGGW	4 cut(s)	62, 297, 651, 2360
BsaXI	ACNNNNNCTCC	4 cut(s)	1044, 1074, 1505, 1535
Bsc4I	CCNNNNNNNGG	9 cut(s)	270, 651, 775, 907, 931, 1090, 1476, 1530, 1798
Bse118I	RCCGGY	6 cut(s)	297, 401, 651, 758, 920, 924
Bse1I	ACTGG	7 cut(s)	60, 448, 1170, 1561, 1602, 1703, 2743
Bse8I	GATNNNNATC	2 cut(s)	1053, 2151
BseBI	CCWGG	3 cut(s)	315, 775, 970
BseCI	ATCGAT	2 cut(s)	1686, 2688
BseDI	CCNNGG	8 cut(s)	210, 616, 774, 900, 969, 1913, 1980, 2046
BseGI	GGATG	9 cut(s)	119, 206, 327, 848, 1054, 1252, 1539, 2035, 2279
BseJI	GATNNNNATC	2 cut(s)	1053, 2151
BseLI	CCNNNNNNNGG	9 cut(s)	270, 651, 775, 907, 931, 1090, 1476, 1530, 1798
BseMII	CTCAG	5 cut(s)	297, 459, 2163, 2573, 2738
BseNI	ACTGG	7 cut(s)	60, 448, 1170, 1561, 1602, 1703, 2743
BseRI	GAGGAG	2 cut(s)	9, 177
BseSI	GKGCMC	3 cut(s)	1170, 1988, 2081
BseX3I	CGGCCG	1 cut(s)	922
BseXI	GCAGC	5 cut(s)	623, 2470, 2512, 2525, 2738
BseYI	CCCAGC	2 cut(s)	539, 1652
Bsh1236I	CGCG	5 cut(s)	557, 1369, 1749, 1946, 2593
Bsh1285I	CGRYCG	1 cut(s)	925
BshFI	GGCC	7 cut(s)	318, 628, 924, 1543, 2230, 2279, 2777
BshNI	GGYRCC	5 cut(s)	250, 641, 654, 1976, 1985
BshTI	ACCGGT	2 cut(s)	297, 651
BshVI	ATCGAT	2 cut(s)	1686, 2688
BsiEI	CGRYCG	1 cut(s)	925
BsiHKAI	GWGCWC	1 cut(s)	2015
BsiHKCI	CYCGRG	1 cut(s)	2675
BsiWI	CGTACG	1 cut(s)	258
BslFI	GGGAC	3 cut(s)	950, 1729, 1882
BslI	CCNNNNNNNGG	9 cut(s)	270, 651, 775, 907, 931, 1090, 1476, 1530, 1798
BsmAI	GTCTC	6 cut(s)	387, 745, 1143, 1809, 2351, 2656
BsmBI	CGTCTC	1 cut(s)	2656
BsmFI	GGGAC	3 cut(s)	950, 1729, 1882
BsnI	GGCC	7 cut(s)	318, 628, 924, 1543, 2230, 2279, 2777
Bso31I	GGTCTC	1 cut(s)	2351
BsoBI	CYCGRG	1 cut(s)	2675
Bsp119I	TTCGAA	1 cut(s)	369
Bsp1286I	GDGCHC	7 cut(s)	1170, 1266, 1988, 2015, 2081, 2368, 2682
Bsp1720I	GCTNAGC	2 cut(s)	2266, 2747
Bsp19I	CCATGG	2 cut(s)	616, 1913
BspANI	GGCC	7 cut(s)	318, 628, 924, 1543, 2230, 2279, 2777
BspCNI	CTCAG	5 cut(s)	296, 460, 2164, 2572, 2739
BspDI	ATCGAT	2 cut(s)	1686, 2688
BspFNI	CGCG	5 cut(s)	557, 1369, 1749, 1946, 2593
BspMAI	CTGCAG	1 cut(s)	613
BspPI	GGATC	4 cut(s)	980, 1567, 2611, 2624
BspT104I	TTCGAA	1 cut(s)	369
BspT107I	GGYRCC	5 cut(s)	250, 641, 654, 1976, 1985
BspTNI	GGTCTC	1 cut(s)	2351
BsrBI	CCGCTC	1 cut(s)	677
BsrFI	RCCGGY	6 cut(s)	297, 401, 651, 758, 920, 924
BsrI	ACTGG	7 cut(s)	60, 448, 1170, 1561, 1602, 1703, 2743
BssAI	RCCGGY	6 cut(s)	297, 401, 651, 758, 920, 924
BssECI	CCNNGG	8 cut(s)	210, 616, 774, 900, 969, 1913, 1980, 2046
BssNAI	GTATAC	1 cut(s)	1672
BssNI	GRCGYC	2 cut(s)	251, 2158
BssT1I	CCWWGG	4 cut(s)	616, 1913, 1980, 2046
Bst1107I	GTATAC	1 cut(s)	1672
Bst2UI	CCWGG	3 cut(s)	315, 775, 970
Bst4CI	ACNGT	9 cut(s)	133, 1719, 2000, 2089, 2245, 2347, 2380, 2670, 2707
Bst6I	CTCTTC	5 cut(s)	47, 392, 900, 1878, 1914
BstACI	GRCGYC	2 cut(s)	251, 2158
BstAPI	GCANNNNNTGC	1 cut(s)	1957
BstBAI	YACGTR	1 cut(s)	1865
BstBI	TTCGAA	1 cut(s)	369
BstC8I	GCNNGC	5 cut(s)	222, 591, 1428, 1545, 2232
BstDEI	CTNAG	6 cut(s)	283, 468, 2172, 2266, 2559, 2747
BstDSI	CCRYGG	2 cut(s)	616, 1913
BstEII	GGTNACC	1 cut(s)	58
BstF5I	GGATG	9 cut(s)	119, 206, 327, 848, 1054, 1252, 1539, 2035, 2279
BstFNI	CGCG	5 cut(s)	557, 1369, 1749, 1946, 2593
BstH2I	RGCGCY	1 cut(s)	254
BstHHI	GCGC	3 cut(s)	253, 1946, 1951
BstMAI	GTCTC	6 cut(s)	387, 745, 1143, 1809, 2351, 2656
BstMCI	CGRYCG	1 cut(s)	925
BstNI	CCWGG	3 cut(s)	315, 775, 970
BstNSI	RCATGY	1 cut(s)	766
BstPI	GGTNACC	1 cut(s)	58
BstSCI	CCNGG	7 cut(s)	313, 773, 900, 968, 1002, 2142, 2409
BstSFI	CTRYAG	3 cut(s)	609, 981, 2244
BstSLI	GKGCMC	3 cut(s)	1170, 1988, 2081
BstUI	CGCG	5 cut(s)	557, 1369, 1749, 1946, 2593
BstV1I	GCAGC	5 cut(s)	623, 2470, 2512, 2525, 2738
BstV2I	GAAGAC	2 cut(s)	759, 1166
BstX2I	RGATCY	3 cut(s)	792, 985, 2616
BstXI	CCANNNNNNTGG	2 cut(s)	623, 1121
BstYI	RGATCY	3 cut(s)	792, 985, 2616
BstZ17I	GTATAC	1 cut(s)	1672
BstZI	CGGCCG	1 cut(s)	922
Bsu15I	ATCGAT	2 cut(s)	1686, 2688
BsuI	GTATCC	3 cut(s)	545, 704, 722
BsuRI	GGCC	7 cut(s)	318, 628, 924, 1543, 2230, 2279, 2777
BsuTUI	ATCGAT	2 cut(s)	1686, 2688
BtgI	CCRYGG	2 cut(s)	616, 1913
BtgZI	GCGATG	2 cut(s)	636, 2680
BtsCI	GGATG	9 cut(s)	119, 206, 327, 848, 1054, 1252, 1539, 2035, 2279
BtsI	GCAGTG	3 cut(s)	606, 894, 2623
BtsIMutI	CAGTG	9 cut(s)	135, 441, 606, 894, 1554, 1595, 1893, 2352, 2623
Cac8I	GCNNGC	5 cut(s)	222, 591, 1428, 1545, 2232
CaiI	CAGNNNCTG	1 cut(s)	520
CfoI	GCGC	3 cut(s)	253, 1946, 1951
Cfr10I	RCCGGY	6 cut(s)	297, 401, 651, 758, 920, 924
Cfr13I	GGNCC	6 cut(s)	626, 1307, 1743, 2277, 2395, 2446
ClaI	ATCGAT	2 cut(s)	1686, 2688
CseI	GACGC	1 cut(s)	2599
CspAI	ACCGGT	2 cut(s)	297, 651
CspCI	CAANNNNNGTGG	4 cut(s)	385, 420, 688, 723
CviAII	CATG	8 cut(s)	455, 586, 617, 763, 1549, 1729, 1858, 1914
DdeI	CTNAG	6 cut(s)	283, 468, 2172, 2266, 2559, 2747
DinI	GGCGCC	1 cut(s)	252
DraI	TTTAAA	1 cut(s)	2331
DrdI	GACNNNNNNGTC	3 cut(s)	67, 2648, 2795
DseDI	GACNNNNNNGTC	3 cut(s)	67, 2648, 2795
EaeI	YGGCCR	3 cut(s)	316, 922, 2775
EagI	CGGCCG	1 cut(s)	922
Eam1104I	CTCTTC	5 cut(s)	47, 392, 900, 1878, 1914
EarI	CTCTTC	5 cut(s)	47, 392, 900, 1878, 1914
EciI	GGCGGA	2 cut(s)	1775, 2609
EclXI	CGGCCG	1 cut(s)	922
Eco130I	CCWWGG	4 cut(s)	616, 1913, 1980, 2046
Eco24I	GRGCYC	3 cut(s)	1266, 2368, 2682
Eco31I	GGTCTC	1 cut(s)	2351
Eco32I	GATATC	2 cut(s)	1204, 2135
Eco47I	GGWCC	4 cut(s)	1307, 1743, 2395, 2446
Eco52I	CGGCCG	1 cut(s)	922
Eco57I	CTGAAG	1 cut(s)	2453
Eco72I	CACGTG	1 cut(s)	1865
Eco88I	CYCGRG	1 cut(s)	2675
Eco91I	GGTNACC	1 cut(s)	58
EcoO109I	RGGNCCY	1 cut(s)	1743
EcoO65I	GGTNACC	1 cut(s)	58
EcoRI	GAATTC	2 cut(s)	287, 485
EcoRII	CCWGG	3 cut(s)	313, 773, 968
EcoRV	GATATC	2 cut(s)	1204, 2135
EcoT14I	CCWWGG	4 cut(s)	616, 1913, 1980, 2046
EcoT38I	GRGCYC	3 cut(s)	1266, 2368, 2682
EgeI	GGCGCC	1 cut(s)	252
EheI	GGCGCC	1 cut(s)	252
ErhI	CCWWGG	4 cut(s)	616, 1913, 1980, 2046
Esp3I	CGTCTC	1 cut(s)	2656
FaeI	CATG	8 cut(s)	458, 589, 620, 766, 1552, 1732, 1861, 1917
FaqI	GGGAC	3 cut(s)	950, 1729, 1882
FatI	CATG	8 cut(s)	454, 585, 616, 762, 1548, 1728, 1857, 1913
FauI	CCCGC	2 cut(s)	1329, 1754
FbaI	TGATCA	2 cut(s)	1879, 2308
FblI	GTMKAC	3 cut(s)	842, 1671, 2340
Fnu4HI	GCNGC	9 cut(s)	254, 612, 1352, 1614, 1947, 2459, 2501, 2514, 2752
FokI	GGATG	9 cut(s)	106, 193, 314, 835, 1061, 1259, 1546, 2042, 2286
FriOI	GRGCYC	3 cut(s)	1266, 2368, 2682
Fsp4HI	GCNGC	9 cut(s)	254, 612, 1352, 1614, 1947, 2459, 2501, 2514, 2752
FspBI	CTAG	3 cut(s)	630, 737, 2354
GlaI	GCGC	3 cut(s)	252, 1945, 1950
GluI	GCNGC	9 cut(s)	254, 612, 1352, 1614, 1947, 2459, 2501, 2514, 2752
GsaI	CCCAGC	2 cut(s)	543, 1656
GsuI	CTGGAG	6 cut(s)	465, 701, 1501, 1507, 1686, 2760
HaeII	RGCGCY	1 cut(s)	254
HaeIII	GGCC	7 cut(s)	318, 628, 924, 1543, 2230, 2279, 2777
HgaI	GACGC	1 cut(s)	2599
HhaI	GCGC	3 cut(s)	253, 1946, 1951
Hin1I	GRCGYC	2 cut(s)	251, 2158
Hin1II	CATG	8 cut(s)	458, 589, 620, 766, 1552, 1732, 1861, 1917
Hin6I	GCGC	3 cut(s)	251, 1944, 1949
HinP1I	GCGC	3 cut(s)	251, 1944, 1949
HincII	GTYRAC	3 cut(s)	843, 2162, 2341
HindII	GTYRAC	3 cut(s)	843, 2162, 2341
HindIII	AAGCTT	1 cut(s)	2721
Hpy99I	CGWCG	6 cut(s)	707, 722, 791, 2160, 2525, 2578
HpyCH4III	ACNGT	9 cut(s)	133, 1719, 2000, 2089, 2245, 2347, 2380, 2670, 2707
HpyCH4IV	ACGT	5 cut(s)	702, 1668, 1864, 2004, 2158
HpyCH4V	TGCA	9 cut(s)	220, 611, 878, 1214, 1709, 1960, 2585, 2599, 2694
HpyF3I	CTNAG	6 cut(s)	283, 468, 2172, 2266, 2559, 2747
HpySE526I	ACGT	5 cut(s)	702, 1668, 1864, 2004, 2158
Hsp92I	GRCGYC	2 cut(s)	251, 2158
Hsp92II	CATG	8 cut(s)	458, 589, 620, 766, 1552, 1732, 1861, 1917
HspAI	GCGC	3 cut(s)	251, 1944, 1949
KasI	GGCGCC	1 cut(s)	250
KflI	GGGWCCC	1 cut(s)	1743
KpnI	GGTACC	2 cut(s)	658, 1980
Ksp22I	TGATCA	2 cut(s)	1879, 2308
LmnI	GCTCC	6 cut(s)	22, 1093, 1526, 1649, 2363, 2412
Lsp1109I	GCAGC	5 cut(s)	623, 2470, 2512, 2525, 2738
LweI	GCATC	5 cut(s)	233, 439, 465, 1761, 2703
MaeI	CTAG	3 cut(s)	630, 737, 2354
MaeII	ACGT	5 cut(s)	702, 1668, 1864, 2004, 2158
MaeIII	GTNAC	6 cut(s)	46, 58, 133, 439, 1586, 2000
MbiI	CCGCTC	1 cut(s)	677
MflI	RGATCY	3 cut(s)	792, 985, 2616
MhlI	GDGCHC	7 cut(s)	1170, 1266, 1988, 2015, 2081, 2368, 2682
MlsI	TGGCCA	1 cut(s)	318
MluI	ACGCGT	2 cut(s)	555, 2591
MluNI	TGGCCA	1 cut(s)	318
Mly113I	GGCGCC	1 cut(s)	251
MlyI	GAGTC	5 cut(s)	77, 389, 1508, 1776, 1864
MmeI	TCCRAC	3 cut(s)	113, 2556, 2788
Mox20I	TGGCCA	1 cut(s)	318
MscI	TGGCCA	1 cut(s)	318
MseI	TTAA	4 cut(s)	495, 996, 2168, 2330
MslI	CAYNNNNRTG	4 cut(s)	621, 761, 1020, 2114
Msp20I	TGGCCA	1 cut(s)	318
MspA1I	CMGCKG	1 cut(s)	1091
MspR9I	CCNGG	7 cut(s)	315, 775, 902, 970, 1004, 2144, 2411
MteI	GCGCNGCGC	1 cut(s)	1947
MvaI	CCWGG	3 cut(s)	315, 775, 970
MvnI	CGCG	5 cut(s)	557, 1369, 1749, 1946, 2593
NarI	GGCGCC	1 cut(s)	251
NciI	CCSGG	4 cut(s)	902, 1004, 2144, 2411
NcoI	CCATGG	2 cut(s)	616, 1913
NlaIII	CATG	8 cut(s)	458, 589, 620, 766, 1552, 1732, 1861, 1917
NmuCI	GTSAC	5 cut(s)	46, 58, 133, 439, 2000
NspI	RCATGY	1 cut(s)	766
NspV	TTCGAA	1 cut(s)	369
OliI	CACNNNNGTG	1 cut(s)	2114
PcsI	WCGNNNNNNNCGW	5 cut(s)	366, 375, 1406, 2793, 2802
Pfl23II	CGTACG	1 cut(s)	258
PflFI	GACNNNGTC	2 cut(s)	131, 2792
PfoI	TCCNGGA	1 cut(s)	2409
PinAI	ACCGGT	2 cut(s)	297, 651
PkrI	GCNGC	9 cut(s)	255, 613, 1353, 1615, 1948, 2460, 2502, 2515, 2753
PleI	GAGTC	5 cut(s)	76, 388, 1508, 1776, 1864
PluTI	GGCGCC	1 cut(s)	254
PmaCI	CACGTG	1 cut(s)	1865
PmlI	CACGTG	1 cut(s)	1865
PpsI	GAGTC	5 cut(s)	76, 388, 1508, 1776, 1864
Ppu21I	YACGTR	1 cut(s)	1865
PpuMI	RGGWCCY	1 cut(s)	1743
Psp5II	RGGWCCY	1 cut(s)	1743
Psp6I	CCWGG	3 cut(s)	313, 773, 968
PspCI	CACGTG	1 cut(s)	1865
PspEI	GGTNACC	1 cut(s)	58
PspFI	CCCAGC	2 cut(s)	539, 1652
PspGI	CCWGG	3 cut(s)	313, 773, 968
PspLI	CGTACG	1 cut(s)	258
PspPI	GGNCC	6 cut(s)	626, 1307, 1743, 2277, 2395, 2446
PspPPI	RGGWCCY	1 cut(s)	1743
PstI	CTGCAG	1 cut(s)	613
PstNI	CAGNNNCTG	1 cut(s)	520
PsuI	RGATCY	3 cut(s)	792, 985, 2616
PsyI	GACNNNGTC	2 cut(s)	131, 2792
RseI	CAYNNNNRTG	4 cut(s)	621, 761, 1020, 2114
SalI	GTCGAC	2 cut(s)	841, 2339
SaqAI	TTAA	4 cut(s)	495, 996, 2168, 2330
SatI	GCNGC	9 cut(s)	254, 612, 1352, 1614, 1947, 2459, 2501, 2514, 2752
Sau96I	GGNCC	6 cut(s)	626, 1307, 1743, 2277, 2395, 2446
SchI	GAGTC	5 cut(s)	77, 389, 1508, 1776, 1864
ScrFI	CCNGG	7 cut(s)	315, 775, 902, 970, 1004, 2144, 2411
SduI	GDGCHC	7 cut(s)	1170, 1266, 1988, 2015, 2081, 2368, 2682
SfaNI	GCATC	5 cut(s)	233, 439, 465, 1761, 2703
SfcI	CTRYAG	3 cut(s)	609, 981, 2244
SfoI	GGCGCC	1 cut(s)	252
SfuI	TTCGAA	1 cut(s)	369
SinI	GGWCC	4 cut(s)	1307, 1743, 2395, 2446
SmiMI	CAYNNNNRTG	4 cut(s)	621, 761, 1020, 2114
SmlI	CTYRAG	3 cut(s)	952, 1508, 2504
SmoI	CTYRAG	3 cut(s)	952, 1508, 2504
SpeI	ACTAGT	1 cut(s)	736
SspDI	GGCGCC	1 cut(s)	250
SspMI	CTAG	3 cut(s)	630, 737, 2354
StyD4I	CCNGG	7 cut(s)	313, 773, 900, 968, 1002, 2142, 2409
StyI	CCWWGG	4 cut(s)	616, 1913, 1980, 2046
TaaI	ACNGT	9 cut(s)	133, 1719, 2000, 2089, 2245, 2347, 2380, 2670, 2707
TaiI	ACGT	5 cut(s)	705, 1671, 1867, 2007, 2161
TaqII	GACCGA	1 cut(s)	1441
TatI	WGTACW	2 cut(s)	203, 2187
TauI	GCSGC	4 cut(s)	256, 1354, 1616, 1949
Tru1I	TTAA	4 cut(s)	495, 996, 2168, 2330
Tru9I	TTAA	4 cut(s)	495, 996, 2168, 2330
TscAI	CASTG	9 cut(s)	142, 448, 613, 901, 1561, 1602, 1900, 2352, 2630
TseFI	GTSAC	5 cut(s)	46, 58, 133, 439, 2000
TseI	GCWGC	5 cut(s)	611, 2458, 2500, 2513, 2751
Tsp45I	GTSAC	5 cut(s)	46, 58, 133, 439, 2000
TspDTI	ATGAA	9 cut(s)	17, 316, 342, 765, 1004, 1630, 1672, 1842, 2599
TspGWI	ACGGA	3 cut(s)	1415, 1775, 2629
TspRI	CASTG	9 cut(s)	142, 448, 613, 901, 1561, 1602, 1900, 2352, 2630
Tth111I	GACNNNGTC	2 cut(s)	131, 2792
VpaK11BI	GGWCC	4 cut(s)	1307, 1743, 2395, 2446
XapI	RAATTY	7 cut(s)	287, 485, 832, 872, 1225, 1932, 2326
XceI	RCATGY	1 cut(s)	766
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1042, 1911
XmiI	GTMKAC	3 cut(s)	842, 1671, 2340
XspI	CTAG	3 cut(s)	630, 737, 2354
ZraI	GACGTC	1 cut(s)	2159

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.