Rorug02G0514300

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
64558312 .. 64560550
2239 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0514300.1

Sequence Viewer

Length: 939 bp
ATGCTTGATTGGGATCGTTGGCTGGTGAAATGGCGAGTACAGTTTCGGGGGAGGGAATGGAACTTCGTGGACATAGCCACTTTCACTAGCCTCGTCTTCTTGCACTTCCTTTCTCTTTTTGCGCCATTTTACTTCACCTGGACTGCGTTTTGGCTGGCCATTGCGCTCTACTTTGTCTCAGGTGTCGGTGTAACCCTTTCGTTCCATAGGAATCTCTCCCACAGAAGCTTTAAGCTTCCCAGATGGCTCGAGTACTTCTTTGCCTATTGTGGGGTTTTATCACTTCAGAGGAGTCCACTTGATTGGGTGAGCGTACACAGATCCCACCATCAATTTACAGACACAATGAAAGACCCTCATAGCCCAGTGAGAGGATTCTGGTTTAGTCATGTTGGTTGGGCGATCGATTACCGTGGTCGAAACGGAAGTTATGACGCACGACTAAAGAATGTTGGAGATTTGAAAAGACAACCATACTATATATTTCTCCATTATACATACCCTCTTCATTATGCTGCTCTTGGAGTTCTATTGTACTTTGTTGGAGGAATGCCCTTTTTGGTTTGGGGAATGGGAGTAAGGACGGTGCTTTTTCTCCATGCTACATTTGGAATAAACTCAATTTGCCATACATGGGGAAAACAAGTATGGGAAACTGGTGATTTATCCAGAAACAACTGGTTGATTGGATTGCTGGCACATGGAGAAGGTTGGCATAATAATCACCATGCTTTTCAGCACTCAGCTCGACACGGCTTGGAATGGTGGCAAATTGATGTTACTTGGTATGTCATAAGATTTCTTGAACTTGTGGGTTTGGCAACAGAAGTGAAGCTTCCAACTGAGACTCAGAAGAAACAAAGAGCTTTAAGCAACAAAATGATCCACGAGGAGAAGCAGCAGCAGCTTGAAACAAAAGTCCAAAATGGCAAGCTTTGA

Protein Analysis

312

Amino Acids

36.95

Weight (kDa)

9.59

Isoelectric Point (pI)

35.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FA_desaturase PF00487 46 - 259 9.8e-18 Fatty acid desaturase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 3 cut(s) 21, 315, 877
AcoI YGGCCR 1 cut(s) 156
AcuI CTGAAG 1 cut(s) 269
AfaI GTAC 4 cut(s) 39, 254, 315, 536
AfiI CCNNNNNNNGG 3 cut(s) 270, 371, 634
AgsI TTSAA 3 cut(s) 463, 806, 911
AjnI CCWGG 1 cut(s) 137
AluBI AGCT 7 cut(s) 228, 235, 746, 835, 866, 907, 934
AluI AGCT 7 cut(s) 228, 235, 746, 835, 866, 907, 934
Alw26I GTCTC 2 cut(s) 181, 839
AlwI GGATC 3 cut(s) 21, 315, 877
Ama87I CYCGRG 1 cut(s) 248
AoxI GGCC 1 cut(s) 156
ApeKI GCWGC 4 cut(s) 515, 898, 901, 904
AspLEI GCGC 2 cut(s) 124, 166
AsuHPI GGTGA 5 cut(s) 37, 127, 319, 671, 716
AvaI CYCGRG 1 cut(s) 248
BalI TGGCCA 1 cut(s) 158
BauI CACGAG 1 cut(s) 887
BbsI GAAGAC 1 cut(s) 88
BbvI GCAGC 4 cut(s) 502, 910, 913, 916
BccI CCATC 2 cut(s) 237, 336
BceAI ACGGC 1 cut(s) 769
BcgI CGANNNNNNTGC 2 cut(s) 728, 762
BciT130I CCWGG 1 cut(s) 139
BcoDI GTCTC 2 cut(s) 181, 839
BfaI CTAG 1 cut(s) 87
BisI GCNGC 4 cut(s) 516, 899, 902, 905
BlsI GCNGC 4 cut(s) 517, 900, 903, 906
BmcAI AGTACT 1 cut(s) 254
Bme1390I CCNGG 1 cut(s) 139
BmeT110I CYCGRG 1 cut(s) 248
BmrFI CCNGG 1 cut(s) 139
BmrI ACTGGG 1 cut(s) 359
BmuI ACTGGG 1 cut(s) 359
BpiI GAAGAC 1 cut(s) 88
Bsa29I ATCGAT 1 cut(s) 405
BsaBI GATNNNNATC 1 cut(s) 12
BsaJI CCNNGG 1 cut(s) 412
Bsc4I CCNNNNNNNGG 3 cut(s) 270, 371, 634
Bse1I ACTGG 3 cut(s) 365, 661, 683
Bse3DI GCAATG 1 cut(s) 159
Bse8I GATNNNNATC 1 cut(s) 12
BseBI CCWGG 1 cut(s) 139
BseCI ATCGAT 1 cut(s) 405
BseDI CCNNGG 1 cut(s) 412
BseJI GATNNNNATC 1 cut(s) 12
BseLI CCNNNNNNNGG 3 cut(s) 270, 371, 634
BseMI GCAATG 1 cut(s) 159
BseMII CTCAG 4 cut(s) 192, 756, 834, 863
BseNI ACTGG 3 cut(s) 365, 661, 683
BseRI GAGGAG 2 cut(s) 304, 905
BseXI GCAGC 4 cut(s) 502, 910, 913, 916
Bsh1285I CGRYCG 1 cut(s) 405
BshFI GGCC 1 cut(s) 158
BshVI ATCGAT 1 cut(s) 405
BsiEI CGRYCG 1 cut(s) 405
BsiHKCI CYCGRG 1 cut(s) 248
BslI CCNNNNNNNGG 3 cut(s) 270, 371, 634
BsmAI GTCTC 2 cut(s) 181, 839
BsmI GAATGC 1 cut(s) 555
BsnI GGCC 1 cut(s) 158
BsoBI CYCGRG 1 cut(s) 248
Bsp143I GATC 4 cut(s) 13, 320, 402, 882
BspANI GGCC 1 cut(s) 158
BspCNI CTCAG 4 cut(s) 191, 755, 835, 862
BspDI ATCGAT 1 cut(s) 405
BspPI GGATC 3 cut(s) 21, 315, 877
BsrDI GCAATG 1 cut(s) 159
BsrI ACTGG 3 cut(s) 365, 661, 683
BssECI CCNNGG 1 cut(s) 412
BssMI GATC 4 cut(s) 13, 320, 402, 882
BssSI CACGAG 1 cut(s) 887
Bst2BI CACGAG 1 cut(s) 887
Bst2UI CCWGG 1 cut(s) 139
Bst4CI ACNGT 3 cut(s) 42, 413, 586
Bst6I CTCTTC 1 cut(s) 510
BstC8I GCNNGC 3 cut(s) 156, 696, 932
BstDEI CTNAG 4 cut(s) 178, 742, 843, 849
BstDSI CCRYGG 1 cut(s) 412
BstHHI GCGC 2 cut(s) 124, 166
BstKTI GATC 4 cut(s) 16, 323, 405, 885
BstMAI GTCTC 2 cut(s) 181, 839
BstMBI GATC 4 cut(s) 13, 320, 402, 882
BstMCI CGRYCG 1 cut(s) 405
BstMWI GCNNNNNNNGC 1 cut(s) 904
BstNI CCWGG 1 cut(s) 139
BstSCI CCNGG 1 cut(s) 137
BstV1I GCAGC 4 cut(s) 502, 910, 913, 916
BstV2I GAAGAC 1 cut(s) 88
BstX2I RGATCY 1 cut(s) 320
BstXI CCANNNNNNTGG 1 cut(s) 303
BstYI RGATCY 1 cut(s) 320
Bsu15I ATCGAT 1 cut(s) 405
BsuRI GGCC 1 cut(s) 158
BsuTUI ATCGAT 1 cut(s) 405
BtgI CCRYGG 1 cut(s) 412
BtsIMutI CAGTG 1 cut(s) 372
Cac8I GCNNGC 3 cut(s) 156, 696, 932
CfoI GCGC 2 cut(s) 124, 166
ClaI ATCGAT 1 cut(s) 405
CseI GACGC 1 cut(s) 443
Csp6I GTAC 4 cut(s) 38, 253, 314, 535
CviAII CATG 5 cut(s) 389, 599, 633, 701, 728
CviQI GTAC 4 cut(s) 38, 253, 314, 535
DdeI CTNAG 4 cut(s) 178, 742, 843, 849
DpnI GATC 4 cut(s) 15, 322, 404, 884
DpnII GATC 4 cut(s) 13, 320, 402, 882
EaeI YGGCCR 1 cut(s) 156
Eam1104I CTCTTC 1 cut(s) 510
EarI CTCTTC 1 cut(s) 510
Eco57I CTGAAG 1 cut(s) 269
Eco88I CYCGRG 1 cut(s) 248
EcoRII CCWGG 1 cut(s) 137
FaeI CATG 5 cut(s) 392, 602, 636, 704, 731
FalI AAGNNNNNCTT 2 cut(s) 819, 851
FatI CATG 5 cut(s) 388, 598, 632, 700, 727
Fnu4HI GCNGC 4 cut(s) 516, 899, 902, 905
Fsp4HI GCNGC 4 cut(s) 516, 899, 902, 905
FspBI CTAG 1 cut(s) 87
GlaI GCGC 2 cut(s) 123, 165
GluI GCNGC 4 cut(s) 516, 899, 902, 905
HaeIII GGCC 1 cut(s) 158
HgaI GACGC 1 cut(s) 443
HhaI GCGC 2 cut(s) 124, 166
Hin1II CATG 5 cut(s) 392, 602, 636, 704, 731
Hin6I GCGC 2 cut(s) 122, 164
HinP1I GCGC 2 cut(s) 122, 164
HindIII AAGCTT 4 cut(s) 226, 233, 833, 932
HinfI GANTC 4 cut(s) 211, 292, 375, 847
HphI GGTGA 5 cut(s) 37, 127, 319, 671, 716
Hpy166II GTNNAC 3 cut(s) 70, 296, 316
Hpy188I TCNGA 2 cut(s) 288, 852
Hpy188III TCNNGA 2 cut(s) 669, 803
Hpy8I GTNNAC 3 cut(s) 70, 296, 316
HpyAV CCTTC 1 cut(s) 701
HpyCH4III ACNGT 3 cut(s) 42, 413, 586
HpyCH4V TGCA 1 cut(s) 103
HpyF10VI GCNNNNNNNGC 1 cut(s) 904
HpyF3I CTNAG 4 cut(s) 178, 742, 843, 849
Hsp92II CATG 5 cut(s) 392, 602, 636, 704, 731
HspAI GCGC 2 cut(s) 122, 164
Kzo9I GATC 4 cut(s) 13, 320, 402, 882
Lsp1109I GCAGC 4 cut(s) 502, 910, 913, 916
MaeI CTAG 1 cut(s) 87
MaeIII GTNAC 2 cut(s) 190, 778
MalI GATC 4 cut(s) 15, 322, 404, 884
MboI GATC 4 cut(s) 13, 320, 402, 882
MboII GAAGA 3 cut(s) 88, 497, 865
MflI RGATCY 1 cut(s) 320
MlsI TGGCCA 1 cut(s) 158
MluCI AATT 3 cut(s) 332, 621, 771
MluNI TGGCCA 1 cut(s) 158
MlyI GAGTC 2 cut(s) 301, 841
MmeI TCCRAC 3 cut(s) 433, 523, 863
MnlI CCTC 8 cut(s) 45, 101, 282, 365, 366, 513, 539, 883
Mox20I TGGCCA 1 cut(s) 158
MscI TGGCCA 1 cut(s) 158
MseI TTAA 2 cut(s) 231, 869
Msp20I TGGCCA 1 cut(s) 158
MspR9I CCNGG 1 cut(s) 139
Mva1269I GAATGC 1 cut(s) 555
MvaI CCWGG 1 cut(s) 139
MwoI GCNNNNNNNGC 1 cut(s) 904
NdeII GATC 4 cut(s) 13, 320, 402, 882
NlaIII CATG 5 cut(s) 392, 602, 636, 704, 731
PaeR7I CTCGAG 1 cut(s) 248
PctI GAATGC 1 cut(s) 555
PfeI GAWTC 2 cut(s) 211, 375
PkrI GCNGC 4 cut(s) 517, 900, 903, 906
Ple19I CGATCG 1 cut(s) 405
PleI GAGTC 2 cut(s) 300, 841
PpsI GAGTC 2 cut(s) 300, 841
Psp6I CCWGG 1 cut(s) 137
PspGI CCWGG 1 cut(s) 137
PspXI VCTCGAGB 1 cut(s) 248
PsuI RGATCY 1 cut(s) 320
PvuI CGATCG 1 cut(s) 405
RsaI GTAC 4 cut(s) 39, 254, 315, 536
RsaNI GTAC 4 cut(s) 38, 253, 314, 535
SaqAI TTAA 2 cut(s) 231, 869
SatI GCNGC 4 cut(s) 516, 899, 902, 905
Sau3AI GATC 4 cut(s) 13, 320, 402, 882
ScaI AGTACT 1 cut(s) 254
SchI GAGTC 2 cut(s) 301, 841
ScrFI CCNGG 1 cut(s) 139
Sfr274I CTCGAG 1 cut(s) 248
SlaI CTCGAG 1 cut(s) 248
SmlI CTYRAG 1 cut(s) 248
SmoI CTYRAG 1 cut(s) 248
Sse9I AATT 3 cut(s) 332, 621, 771
SspMI CTAG 1 cut(s) 87
StyD4I CCNGG 1 cut(s) 137
TaaI ACNGT 3 cut(s) 42, 413, 586
TaqI TCGA 4 cut(s) 249, 405, 418, 748
TasI AATT 3 cut(s) 332, 621, 771
TatI WGTACW 3 cut(s) 37, 252, 534
TfiI GAWTC 2 cut(s) 211, 375
Tru1I TTAA 2 cut(s) 231, 869
Tru9I TTAA 2 cut(s) 231, 869
TscAI CASTG 1 cut(s) 372
TseI GCWGC 4 cut(s) 515, 898, 901, 904
TspDTI ATGAA 2 cut(s) 362, 497
TspGWI ACGGA 1 cut(s) 438
TspRI CASTG 1 cut(s) 372
XcmI CCANNNNNNNNNTGG 1 cut(s) 605
XhoI CTCGAG 1 cut(s) 248
XspI CTAG 1 cut(s) 87
ZrmI AGTACT 1 cut(s) 254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.