RLG00000021530

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
76227077 .. 76229572
2496 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021530

Sequence Viewer

Length: 2496 bp
ATGGAACCGATTCCCATTCCTCTCTACCTCTCCTTGTTTCTCCACATCCTTACTCTCCTACAGGCCAGTCAGTCACCGCCTATATACACTCCGGTGGATGATATCACCCTTGACTGTGGCAATTCGGGGCAACACTCCAATAACTATGACTCTAGAATTTGGAGTGGAGACATCAACTCAACGTTTTCCCCCATACAGGATGGTGAAAGTAACGCAACATACCAATTCAGAAAAGCACCTCCATCATTGTCAGAATCCACCAGCCAAGTCCCTTACTCCACTGCCCGCCTTTCTTACTCAGAATTCACATACAGAATTCCTCTTTCTCCCGGCAAAAAGTTTGTCCGCTTGTATTTCAACCCAGCTTCATACCCGGACTTCCACAACTCCAACTCTCTCTTCTCTGTCACAGCTAGCGACTACATCCTCCTCAAAGACTTCAGAGCTTACATCGCTGCCGATGGTGTTTACAGGGAGACGCCGTTGATGAGAGAATTCTGCGTCACCATAGAGACAGAACATAGCCTAAACATCACATTCACACCCAGCAAAGATGCATATGCTTTCATCAACGGGATTGAAATCGTGTCGATGCCCACCAATCTTTACACCACTTCAGTGCGTTCCATCGGCAGCGATAACCCCTATTCAGTCGAAAGCAGAAAAGCTCTGGACATGGAGTACCGGATCAACATAGGTGGAAAGCCAATCAACATTACTGAAGACACTGGAATGTACCGGAAATGGGACGCTGCTGATGACATGTATCTGGATGGTTTGAGTAAAAAGTACAGCGTGCTAGCACAGAACAATACGATTGAGCTCAAATTTGTCGAAACTCCAGAGTACTCTGCTCCAAAAGAAGTTTACAATACAGGTCGGTCAATGTGGATGAACAAGACCATCAACAAGAGCTACAATCTCACCTGGTCATTTCCTGTAGACTCTAACTTCTCCTACCTGGTTAGATTGCATTTTTGTGAGTTTGAGTCTGACATTACCAAGAGTGGAGAGAGGACATTTGTAATTTACCTGGCCAATCAAATTGCTGAACAAGGAGCAGACGTAATTCTATGGAGTGGTGGAAATGGGATTCCAACATACAGAGACTACATGTTGCTCATGCTTGGCCCCGGAAGCCAGAGAAAAGTTAATCTCTCTATTGCATTTCAAGCATTACGAACAGATTGGTCGATTGAATATAGGGACGCAACATTGAATGGACTCGAAATCTTCAAGCTAATTGACCCAAAAGGCCAGCTCAGAACCAACCCCGACCCAAAGATGACACCTCATAGTAAGTCATTTCCTGTGCTTCCCCTCGTTGCTGGTGTAGGTTCCAGCATACTTGTGTTCTTTGTCCTCGGATACTTGGTTTTCAGAAAAAGATGGAAAGTCAAGGACTCTAGCTCCAGCAAGAGGAGAATGAAGTTTCCAACGACCCCCGGGTCCTCTTATCCGTGTCGCTACTTTTCATTAGCAGAGATCAAAGCCGCCACCAAAAACTTCAGTGATGCTTTTATCATTGGAGCTGGAGGATTTGGTAATGTGTACAAAGGATGGATTGATGGTGGAACCACTCCAGTTGCAATCAAACGGCTGAAACCAGAATCATCCCAAGGTGTCCATGAGTTTGAGACTGAAATTGAGATGCTCTCCCAACTCCGTCATCGCCATTTGGTTTCACTCATTGGATATTGTACTGATAAAGGAGAGATGATCTTATTGTATGATTACATGGCACAAGGAACCCTCCGTGACCATCTCTACCACACTAATAACCCACCTCTTCCCTGGGAACAACGGCTTCAGATTTGTATTGGTGCAGCTCGAGGGTTGCAGTATCTTCATACTGGTGCAAAGGGCACCATCATTCACCGAGATGTGAAGAGCACAAACATCTTATTGGATGACAAATGGGTGGCCAAGGTTTCAGATTTCGGGCTGTCCAAAGGCACAACAAACATGTCCAAAACCCACATCAGCACGATTGTGAAAGGGAGTTTCGGGTATCTGGATCCAGAATACTACAGACGACAACGTCTGACTGAGAAGTCAGACGTCTACTCATTTGGTGTAGTTCTGTGTGAGGTATTGTGTGCAAGGCCAGCAGTAATACATACAGAGAAAACAGAATTACACCAAGTGAATCTGGCAGAGTGGACCAAGAGCTGTCATCAGAATGGAGAACTTGATCAAATCATTGATTCAAGTTTGAGAGGTAAGATTGCAGCCGAGTGCTTGAATATATTCGCTGAGGTAGCAGTCAGTTGCATGCATGACGATGGGACCAAACGGCCGTCCATGAATGATGTTGTAAGAGGGCTTGAGCTTGCATTGGACCTTCAACGAAGCACAGAGGGGAACATCAAGTGCACTGAAAAGATCGGTGAAACTGAAACAAGCAGTAGTGAGCAAAGTTGCGCAACCAACAATTCCATTGTATGCATATCTGGGACAATCTTCTCTGAGGTCAACAATCCGAGCGGGAGATAA

Protein Analysis

832

Amino Acids

93.33

Weight (kDa)

6.55

Isoelectric Point (pI)

43.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Malectin_like PF12819 37 - 413 5e-27 Malectin-like domain
Malectin PF11721 228 - 371 5.8e-08 Malectin domain
Pkinase PF00069 508 - 773 1.3e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 509 - 775 2.8e-50 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 1447, 2040, 2053
AatII GACGTC 1 cut(s) 2064
Acc16I TGCGCA 1 cut(s) 2425
AccB1I GGYRCC 1 cut(s) 1865
AccBSI CCGCTC 1 cut(s) 2487
AccI GTMKAC 2 cut(s) 942, 2064
AciI CCGC 5 cut(s) 77, 286, 346, 1494, 2487
AclI AACGTT 1 cut(s) 182
AclWI GGATC 3 cut(s) 695, 2012, 2025
AcoI YGGCCR 3 cut(s) 1035, 1923, 2297
AcsI RAATTY 5 cut(s) 156, 302, 315, 494, 827
AcuI CTGAAG 5 cut(s) 424, 600, 741, 1492, 1793
AcyI GRCGYC 2 cut(s) 479, 2061
AdeI CACNNNGTG 1 cut(s) 2146
AfaI GTAC 6 cut(s) 683, 737, 791, 848, 1553, 1702
AfiI CCNNNNNNNGG 3 cut(s) 196, 745, 1419
AflIII ACRYGT 3 cut(s) 762, 1113, 1965
AgsI TTSAA 9 cut(s) 358, 581, 1172, 1199, 1219, 1237, 2211, 2245, 2348
AjnI CCWGG 4 cut(s) 926, 960, 1032, 1793
AjuI GAANNNNNNNTTGG 2 cut(s) 383, 415
AleI CACNNNNGTG 3 cut(s) 92, 617, 1991
Alw21I GWGCWC 3 cut(s) 825, 1895, 2378
Alw26I GTCTC 5 cut(s) 162, 470, 506, 1101, 1631
Alw44I GTGCAC 1 cut(s) 2374
AlwI GGATC 3 cut(s) 695, 2012, 2025
Ama87I CYCGRG 2 cut(s) 1445, 1830
AoxI GGCC 7 cut(s) 63, 1035, 1129, 1255, 1923, 2105, 2297
ApaLI GTGCAC 1 cut(s) 2374
ApeKI GCWGC 5 cut(s) 455, 633, 752, 1826, 2231
ApoI RAATTY 5 cut(s) 156, 302, 315, 494, 827
ArsI GACNNNNNNTTYG 2 cut(s) 327, 359
Asp700I GAANNNNTTC 2 cut(s) 9, 2249
AspLEI GCGC 1 cut(s) 2426
AspS9I GGNCC 5 cut(s) 1130, 1449, 2163, 2289, 2341
AsuC2I CCSGG 5 cut(s) 330, 374, 1134, 1446, 1447
AsuHPI GGTGA 7 cut(s) 66, 97, 215, 496, 916, 1868, 2402
AsuNHI GCTAGC 2 cut(s) 413, 799
AvaI CYCGRG 2 cut(s) 1445, 1830
AvaII GGWCC 4 cut(s) 1449, 2163, 2289, 2341
BaeGI GKGCMC 2 cut(s) 1868, 2378
BalI TGGCCA 2 cut(s) 1037, 1925
BamHI GGATCC 1 cut(s) 2017
BanI GGYRCC 1 cut(s) 1865
BanII GRGCYC 1 cut(s) 825
BbsI GAAGAC 1 cut(s) 729
Bbv12I GWGCWC 3 cut(s) 825, 1895, 2378
BbvCI CCTCAGC 1 cut(s) 2256
BbvI GCAGC 5 cut(s) 442, 645, 739, 1838, 2243
BceAI ACGGC 5 cut(s) 466, 1613, 1820, 2284, 2312
BciT130I CCWGG 4 cut(s) 928, 962, 1034, 1795
BciVI GTATCC 1 cut(s) 1361
BclI TGATCA 1 cut(s) 2194
BcnI CCSGG 5 cut(s) 330, 374, 1134, 1446, 1447
BcoDI GTCTC 5 cut(s) 162, 470, 506, 1101, 1631
BfaI CTAG 4 cut(s) 153, 414, 800, 1407
BfmI CTRYAG 3 cut(s) 59, 939, 2029
BfuI GTATCC 1 cut(s) 1361
BisI GCNGC 6 cut(s) 456, 634, 753, 1494, 1827, 2232
BlsI GCNGC 6 cut(s) 457, 635, 754, 1495, 1828, 2233
BmcAI AGTACT 1 cut(s) 848
Bme1390I CCNGG 9 cut(s) 330, 374, 928, 962, 1034, 1134, 1446, 1447, 1795
Bme18I GGWCC 4 cut(s) 1449, 2163, 2289, 2341
BmeT110I CYCGRG 2 cut(s) 1445, 1830
BmgT120I GGNCC 5 cut(s) 1130, 1449, 2163, 2289, 2341
BmiI GGNNCC 9 cut(s) 6, 1132, 1339, 1450, 1576, 1750, 1867, 2019, 2290
BmrFI CCNGG 9 cut(s) 330, 374, 928, 962, 1034, 1134, 1446, 1447, 1795
BmsI GCATC 4 cut(s) 544, 582, 1504, 1641
BmtI GCTAGC 2 cut(s) 417, 803
BpiI GAAGAC 1 cut(s) 729
BplI GAGNNNNNCTC 2 cut(s) 1640, 1672
BpmI CTGGAG 4 cut(s) 825, 1396, 1554, 1566
Bpu10I CCTNAGC 1 cut(s) 2256
BpuEI CTTGAG 1 cut(s) 2348
BpuMI CCSGG 5 cut(s) 330, 374, 1134, 1446, 1447
BsaBI GATNNNNATC 1 cut(s) 581
BsaHI GRCGYC 2 cut(s) 479, 2061
BsaJI CCNNGG 8 cut(s) 1132, 1363, 1444, 1445, 1618, 1793, 1794, 1926
BsaWI WCCGGW 3 cut(s) 91, 684, 738
BsaXI ACNNNNNCTCC 6 cut(s) 467, 497, 1050, 1080, 1394, 1424
Bsc4I CCNNNNNNNGG 3 cut(s) 196, 745, 1419
Bse1I ACTGG 4 cut(s) 66, 733, 1583, 1858
Bse8I GATNNNNATC 1 cut(s) 581
BseBI CCWGG 4 cut(s) 928, 962, 1034, 1795
BseDI CCNNGG 8 cut(s) 1132, 1363, 1444, 1445, 1618, 1793, 1794, 1926
BseGI GGATG 9 cut(s) 45, 103, 205, 423, 778, 897, 1565, 1613, 1915
BseJI GATNNNNATC 1 cut(s) 581
BseLI CCNNNNNNNGG 3 cut(s) 196, 745, 1419
BseMII CTCAG 5 cut(s) 312, 1276, 2040, 2247, 2460
BseNI ACTGG 4 cut(s) 66, 733, 1583, 1858
BseRI GAGGAG 2 cut(s) 419, 1435
BseSI GKGCMC 2 cut(s) 1868, 2378
BseX3I CGGCCG 1 cut(s) 2297
BseXI GCAGC 5 cut(s) 442, 645, 739, 1838, 2243
BseYI CCCAGC 2 cut(s) 361, 545
BsgI GTGCAG 1 cut(s) 1845
Bsh1285I CGRYCG 1 cut(s) 2300
BshFI GGCC 7 cut(s) 65, 1037, 1131, 1257, 1925, 2107, 2299
BshNI GGYRCC 1 cut(s) 1865
BsiEI CGRYCG 1 cut(s) 2300
BsiHKAI GWGCWC 3 cut(s) 825, 1895, 2378
BsiHKCI CYCGRG 2 cut(s) 1445, 1830
BsiSI CCGG 7 cut(s) 92, 330, 374, 685, 739, 1134, 1446
BslFI GGGAC 5 cut(s) 254, 761, 1220, 2302, 2470
BslI CCNNNNNNNGG 3 cut(s) 196, 745, 1419
BsmAI GTCTC 5 cut(s) 162, 470, 506, 1101, 1631
BsmBI CGTCTC 1 cut(s) 470
BsmFI GGGAC 5 cut(s) 254, 761, 1220, 2302, 2470
BsnI GGCC 7 cut(s) 65, 1037, 1131, 1257, 1925, 2107, 2299
BsoBI CYCGRG 2 cut(s) 1445, 1830
Bsp1286I GDGCHC 4 cut(s) 825, 1868, 1895, 2378
Bsp1407I TGTACA 1 cut(s) 1551
Bsp143I GATC 6 cut(s) 687, 1485, 1719, 2017, 2194, 2385
BspACI CCGC 5 cut(s) 77, 286, 346, 1494, 2487
BspANI GGCC 7 cut(s) 65, 1037, 1131, 1257, 1925, 2107, 2299
BspCNI CTCAG 5 cut(s) 311, 1275, 2041, 2248, 2461
BspLI GGNNCC 9 cut(s) 6, 1132, 1339, 1450, 1576, 1750, 1867, 2019, 2290
BspOI GCTAGC 2 cut(s) 417, 803
BspPI GGATC 3 cut(s) 695, 2012, 2025
BspQI GCTCTTC 1 cut(s) 1883
BspT107I GGYRCC 1 cut(s) 1865
BsrBI CCGCTC 1 cut(s) 2487
BsrGI TGTACA 1 cut(s) 1551
BsrI ACTGG 4 cut(s) 66, 733, 1583, 1858
BssECI CCNNGG 8 cut(s) 1132, 1363, 1444, 1445, 1618, 1793, 1794, 1926
BssMI GATC 6 cut(s) 687, 1485, 1719, 2017, 2194, 2385
BssNI GRCGYC 2 cut(s) 479, 2061
BssT1I CCWWGG 2 cut(s) 1618, 1926
Bst2UI CCWGG 4 cut(s) 928, 962, 1034, 1795
Bst4CI ACNGT 1 cut(s) 116
Bst6I CTCTTC 3 cut(s) 404, 1794, 1883
BstACI GRCGYC 2 cut(s) 479, 2061
BstAUI TGTACA 1 cut(s) 1551
BstC8I GCNNGC 8 cut(s) 286, 415, 797, 801, 1259, 2109, 2276, 2334
BstDEI CTNAG 5 cut(s) 298, 1262, 2049, 2256, 2469
BstF5I GGATG 9 cut(s) 45, 103, 205, 423, 778, 897, 1565, 1613, 1915
BstHHI GCGC 1 cut(s) 2426
BstKTI GATC 6 cut(s) 690, 1488, 1722, 2020, 2197, 2388
BstMAI GTCTC 5 cut(s) 162, 470, 506, 1101, 1631
BstMBI GATC 6 cut(s) 687, 1485, 1719, 2017, 2194, 2385
BstMCI CGRYCG 1 cut(s) 2300
BstMWI GCNNNNNNNGC 5 cut(s) 452, 1137, 1172, 2108, 2261
BstNI CCWGG 4 cut(s) 928, 962, 1034, 1795
BstNSI RCATGY 4 cut(s) 766, 1117, 1969, 2278
BstSCI CCNGG 9 cut(s) 328, 372, 926, 960, 1032, 1132, 1444, 1445, 1793
BstSFI CTRYAG 3 cut(s) 59, 939, 2029
BstSLI GKGCMC 2 cut(s) 1868, 2378
BstV1I GCAGC 5 cut(s) 442, 645, 739, 1838, 2243
BstV2I GAAGAC 1 cut(s) 729
BstX2I RGATCY 1 cut(s) 2017
BstYI RGATCY 1 cut(s) 2017
BstZI CGGCCG 1 cut(s) 2297
BsuI GTATCC 1 cut(s) 1361
BsuRI GGCC 7 cut(s) 65, 1037, 1131, 1257, 1925, 2107, 2299
BtgZI GCGATG 2 cut(s) 436, 1655
BtsCI GGATG 9 cut(s) 45, 103, 205, 423, 778, 897, 1565, 1613, 1915
BtsI GCAGTG 1 cut(s) 279
BtsIMutI CAGTG 5 cut(s) 279, 624, 726, 1516, 2376
Cac8I GCNNGC 8 cut(s) 286, 415, 797, 801, 1259, 2109, 2276, 2334
CfoI GCGC 1 cut(s) 2426
Cfr13I GGNCC 5 cut(s) 1130, 1449, 2163, 2289, 2341
Cfr9I CCCGGG 1 cut(s) 1445
CseI GACGC 4 cut(s) 487, 490, 758, 1217
CsiI ACCWGGT 2 cut(s) 926, 960
Csp6I GTAC 6 cut(s) 682, 736, 790, 847, 1552, 1701
CspCI CAANNNNNGTGG 4 cut(s) 679, 714, 1567, 1602
CviQI GTAC 6 cut(s) 682, 736, 790, 847, 1552, 1701
DdeI CTNAG 5 cut(s) 298, 1262, 2049, 2256, 2469
DpnI GATC 6 cut(s) 689, 1487, 1721, 2019, 2196, 2387
DpnII GATC 6 cut(s) 687, 1485, 1719, 2017, 2194, 2385
DraIII CACNNNGTG 1 cut(s) 2146
DrdI GACNNNNNNGTC 3 cut(s) 1447, 2040, 2053
DseDI GACNNNNNNGTC 3 cut(s) 1447, 2040, 2053
EaeI YGGCCR 3 cut(s) 1035, 1923, 2297
EagI CGGCCG 1 cut(s) 2297
Eam1104I CTCTTC 3 cut(s) 404, 1794, 1883
EarI CTCTTC 3 cut(s) 404, 1794, 1883
Ecl136II GAGCTC 1 cut(s) 823
EclXI CGGCCG 1 cut(s) 2297
Eco130I CCWWGG 2 cut(s) 1618, 1926
Eco24I GRGCYC 1 cut(s) 825
Eco32I GATATC 1 cut(s) 103
Eco47I GGWCC 4 cut(s) 1449, 2163, 2289, 2341
Eco52I CGGCCG 1 cut(s) 2297
Eco53kI GAGCTC 1 cut(s) 823
Eco57I CTGAAG 5 cut(s) 424, 600, 741, 1492, 1793
Eco88I CYCGRG 2 cut(s) 1445, 1830
EcoICRI GAGCTC 1 cut(s) 823
EcoO109I RGGNCCY 1 cut(s) 1449
EcoRI GAATTC 3 cut(s) 302, 315, 494
EcoRII CCWGG 4 cut(s) 926, 960, 1032, 1793
EcoRV GATATC 1 cut(s) 103
EcoT14I CCWWGG 2 cut(s) 1618, 1926
EcoT22I ATGCAT 3 cut(s) 559, 2280, 2450
EcoT38I GRGCYC 1 cut(s) 825
ErhI CCWWGG 2 cut(s) 1618, 1926
Esp3I CGTCTC 1 cut(s) 470
FaqI GGGAC 5 cut(s) 254, 761, 1220, 2302, 2470
FauI CCCGC 2 cut(s) 293, 2480
FauNDI CATATG 1 cut(s) 559
FbaI TGATCA 1 cut(s) 2194
FblI GTMKAC 2 cut(s) 942, 2064
Fnu4HI GCNGC 6 cut(s) 456, 634, 753, 1494, 1827, 2232
FokI GGATG 9 cut(s) 32, 110, 212, 410, 785, 904, 1572, 1600, 1922
FriOI GRGCYC 1 cut(s) 825
Fsp4HI GCNGC 6 cut(s) 456, 634, 753, 1494, 1827, 2232
FspBI CTAG 4 cut(s) 153, 414, 800, 1407
FspI TGCGCA 1 cut(s) 2425
GlaI GCGC 1 cut(s) 2425
GluI GCNGC 6 cut(s) 456, 634, 753, 1494, 1827, 2232
GsaI CCCAGC 2 cut(s) 365, 549
GsuI CTGGAG 4 cut(s) 825, 1396, 1554, 1566
HaeIII GGCC 7 cut(s) 65, 1037, 1131, 1257, 1925, 2107, 2299
HapII CCGG 7 cut(s) 92, 330, 374, 685, 739, 1134, 1446
HgaI GACGC 4 cut(s) 487, 490, 758, 1217
HhaI GCGC 1 cut(s) 2426
Hin1I GRCGYC 2 cut(s) 479, 2061
Hin6I GCGC 1 cut(s) 2424
HinP1I GCGC 1 cut(s) 2424
HincII GTYRAC 1 cut(s) 2476
HindII GTYRAC 1 cut(s) 2476
HpaII CCGG 7 cut(s) 92, 330, 374, 685, 739, 1134, 1446
HphI GGTGA 7 cut(s) 66, 97, 215, 496, 916, 1868, 2402
Hpy166II GTNNAC 8 cut(s) 469, 868, 943, 1552, 2065, 2163, 2376, 2476
Hpy188III TCNNGA 6 cut(s) 153, 671, 770, 842, 2015, 2021
Hpy8I GTNNAC 8 cut(s) 469, 868, 943, 1552, 2065, 2163, 2376, 2476
HpyAV CCTTC 1 cut(s) 2354
HpyCH4III ACNGT 1 cut(s) 116
HpyCH4IV ACGT 4 cut(s) 182, 1065, 2041, 2061
HpyF10VI GCNNNNNNNGC 5 cut(s) 452, 1137, 1172, 2108, 2261
HpyF3I CTNAG 5 cut(s) 298, 1262, 2049, 2256, 2469
HpySE526I ACGT 4 cut(s) 182, 1065, 2041, 2061
Hsp92I GRCGYC 2 cut(s) 479, 2061
HspAI GCGC 1 cut(s) 2424
Ksp22I TGATCA 1 cut(s) 2194
Kzo9I GATC 6 cut(s) 687, 1485, 1719, 2017, 2194, 2385
LguI GCTCTTC 1 cut(s) 1883
LmnI GCTCC 4 cut(s) 859, 1058, 1415, 1529
Lsp1109I GCAGC 5 cut(s) 442, 645, 739, 1838, 2243
LweI GCATC 4 cut(s) 544, 582, 1504, 1641
MabI ACCWGGT 2 cut(s) 926, 960
MaeI CTAG 4 cut(s) 153, 414, 800, 1407
MaeII ACGT 4 cut(s) 182, 1065, 2041, 2061
MaeIII GTNAC 5 cut(s) 72, 209, 406, 502, 1757
MalI GATC 6 cut(s) 689, 1487, 1721, 2019, 2196, 2387
MbiI CCGCTC 1 cut(s) 2487
MboI GATC 6 cut(s) 687, 1485, 1719, 2017, 2194, 2385
MboII GAAGA 7 cut(s) 391, 734, 1225, 1781, 1838, 1900, 2455
MflI RGATCY 1 cut(s) 2017
MhlI GDGCHC 4 cut(s) 825, 1868, 1895, 2378
MlsI TGGCCA 2 cut(s) 1037, 1925
MluNI TGGCCA 2 cut(s) 1037, 1925
MlyI GAGTC 5 cut(s) 143, 938, 998, 1218, 1397
MmeI TCCRAC 3 cut(s) 414, 1121, 1460
Mox20I TGGCCA 2 cut(s) 1037, 1925
Mph1103I ATGCAT 3 cut(s) 559, 2280, 2450
MroXI GAANNNNTTC 2 cut(s) 9, 2249
MscI TGGCCA 2 cut(s) 1037, 1925
MseI TTAA 1 cut(s) 1152
Msp20I TGGCCA 2 cut(s) 1037, 1925
MspI CCGG 7 cut(s) 92, 330, 374, 685, 739, 1134, 1446
MspR9I CCNGG 9 cut(s) 330, 374, 928, 962, 1034, 1134, 1446, 1447, 1795
MvaI CCWGG 4 cut(s) 928, 962, 1034, 1795
MwoI GCNNNNNNNGC 5 cut(s) 452, 1137, 1172, 2108, 2261
NciI CCSGG 5 cut(s) 330, 374, 1134, 1446, 1447
NdeI CATATG 1 cut(s) 559
NdeII GATC 6 cut(s) 687, 1485, 1719, 2017, 2194, 2385
NheI GCTAGC 2 cut(s) 413, 799
NlaIV GGNNCC 9 cut(s) 6, 1132, 1339, 1450, 1576, 1750, 1867, 2019, 2290
NmeAIII GCCGAG 1 cut(s) 2260
NmuCI GTSAC 4 cut(s) 72, 406, 502, 1757
NsbI TGCGCA 1 cut(s) 2425
NsiI ATGCAT 3 cut(s) 559, 2280, 2450
NspI RCATGY 4 cut(s) 766, 1117, 1969, 2278
OliI CACNNNNGTG 3 cut(s) 92, 617, 1991
PaeI GCATGC 1 cut(s) 2278
PaeR7I CTCGAG 1 cut(s) 1830
PasI CCCWGGG 1 cut(s) 1794
PciI ACATGT 3 cut(s) 762, 1113, 1965
PciSI GCTCTTC 1 cut(s) 1883
PdmI GAANNNNTTC 2 cut(s) 9, 2249
PfeI GAWTC 6 cut(s) 10, 254, 1093, 1610, 2149, 2207
PflFI GACNNNGTC 1 cut(s) 2040
PkrI GCNGC 6 cut(s) 457, 635, 754, 1495, 1828, 2233
PleI GAGTC 5 cut(s) 143, 938, 997, 1218, 1397
PpsI GAGTC 5 cut(s) 143, 938, 997, 1218, 1397
PpuMI RGGWCCY 1 cut(s) 1449
PscI ACATGT 3 cut(s) 762, 1113, 1965
Psp124BI GAGCTC 1 cut(s) 825
Psp1406I AACGTT 1 cut(s) 182
Psp5II RGGWCCY 1 cut(s) 1449
Psp6I CCWGG 4 cut(s) 926, 960, 1032, 1793
PspFI CCCAGC 2 cut(s) 361, 545
PspGI CCWGG 4 cut(s) 926, 960, 1032, 1793
PspN4I GGNNCC 9 cut(s) 6, 1132, 1339, 1450, 1576, 1750, 1867, 2019, 2290
PspPI GGNCC 5 cut(s) 1130, 1449, 2163, 2289, 2341
PspPPI RGGWCCY 1 cut(s) 1449
PspXI VCTCGAGB 1 cut(s) 1830
PsuI RGATCY 1 cut(s) 2017
PsyI GACNNNGTC 1 cut(s) 2040
RsaI GTAC 6 cut(s) 683, 737, 791, 848, 1553, 1702
RsaNI GTAC 6 cut(s) 682, 736, 790, 847, 1552, 1701
SacI GAGCTC 1 cut(s) 825
SapI GCTCTTC 1 cut(s) 1883
SaqAI TTAA 1 cut(s) 1152
SatI GCNGC 6 cut(s) 456, 634, 753, 1494, 1827, 2232
Sau3AI GATC 6 cut(s) 687, 1485, 1719, 2017, 2194, 2385
Sau96I GGNCC 5 cut(s) 1130, 1449, 2163, 2289, 2341
ScaI AGTACT 1 cut(s) 848
SchI GAGTC 5 cut(s) 143, 938, 998, 1218, 1397
ScrFI CCNGG 9 cut(s) 330, 374, 928, 962, 1034, 1134, 1446, 1447, 1795
SduI GDGCHC 4 cut(s) 825, 1868, 1895, 2378
SexAI ACCWGGT 2 cut(s) 926, 960
SfaNI GCATC 4 cut(s) 544, 582, 1504, 1641
SfcI CTRYAG 3 cut(s) 59, 939, 2029
Sfr274I CTCGAG 1 cut(s) 1830
SinI GGWCC 4 cut(s) 1449, 2163, 2289, 2341
SlaI CTCGAG 1 cut(s) 1830
SmaI CCCGGG 1 cut(s) 1447
SmlI CTYRAG 2 cut(s) 1830, 2327
SmoI CTYRAG 2 cut(s) 1830, 2327
SphI GCATGC 1 cut(s) 2278
SsiI CCGC 5 cut(s) 77, 286, 346, 1494, 2487
SspMI CTAG 4 cut(s) 153, 414, 800, 1407
SstI GAGCTC 1 cut(s) 825
StyD4I CCNGG 9 cut(s) 328, 372, 926, 960, 1032, 1132, 1444, 1445, 1793
StyI CCWWGG 2 cut(s) 1618, 1926
TaaI ACNGT 1 cut(s) 116
TaiI ACGT 4 cut(s) 185, 1068, 2044, 2064
TaqI TCGA 6 cut(s) 590, 654, 834, 1193, 1227, 1831
TaqII GACCGA 1 cut(s) 870
TatI WGTACW 4 cut(s) 789, 846, 1551, 1700
TauI GCSGC 1 cut(s) 1496
TfiI GAWTC 6 cut(s) 10, 254, 1093, 1610, 2149, 2207
Tru1I TTAA 1 cut(s) 1152
Tru9I TTAA 1 cut(s) 1152
TscAI CASTG 5 cut(s) 286, 624, 733, 1516, 2383
TseFI GTSAC 4 cut(s) 72, 406, 502, 1757
TseI GCWGC 5 cut(s) 455, 633, 752, 1826, 2231
Tsp45I GTSAC 4 cut(s) 72, 406, 502, 1757
TspDTI ATGAA 7 cut(s) 357, 556, 908, 1442, 1464, 1838, 2321
TspGWI ACGGA 3 cut(s) 1449, 1655, 1745
TspMI CCCGGG 1 cut(s) 1445
TspRI CASTG 5 cut(s) 286, 624, 733, 1516, 2383
Tth111I GACNNNGTC 1 cut(s) 2040
VneI GTGCAC 1 cut(s) 2374
VpaK11BI GGWCC 4 cut(s) 1449, 2163, 2289, 2341
XapI RAATTY 5 cut(s) 156, 302, 315, 494, 827
XbaI TCTAGA 1 cut(s) 152
XceI RCATGY 4 cut(s) 766, 1117, 1969, 2278
XcmI CCANNNNNNNNNTGG 1 cut(s) 1791
XhoI CTCGAG 1 cut(s) 1830
XmaI CCCGGG 1 cut(s) 1445
XmiI GTMKAC 2 cut(s) 942, 2064
XmnI GAANNNNTTC 2 cut(s) 9, 2249
XspI CTAG 4 cut(s) 153, 414, 800, 1407
ZraI GACGTC 1 cut(s) 2062
ZrmI AGTACT 1 cut(s) 848
Zsp2I ATGCAT 3 cut(s) 559, 2280, 2450
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.