Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

28374516 .. 28377151

Gene Structure 2636 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ18882

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2550 bp

ATGAAACCAACTCTCGCTCCTCTCCACGTTTTCCTTTTCCAGCATATCATCCGGCTGATCATGGCCACAGAGTCGCTACCTATATACTCTCCGGCCTTTTCTATGACCATTAGCTGTGGCTCCTCAACAGAAGTAGAAATCGATCCTGACGGGCGACATTGGGTTGGAGATGTCAGCTCAAAATTTTCCCCCAGAGAAGTAGGAGAACCTGGTTACACATCTGAAGCTACAAAAGCACCACCTCAGTCGTCCTCCACCAGCCGAGTGCCATACAACACAGCCCGCATTTCTCGCTTCGAATTTACTTATAGATTTCCCATTGCTCCAGGCCAAATGTTATTCGTTCGCTTACATTTCTATCCTGCTTCCTACCCCAACTTCACCCACTCTGAAGCTCACTTCTTTGTCACAGTGGGTCGCTATATCCTTCTCAAAGACTTCAATGCTTCTCTTTTTGCAGATACTGAGGGAGTGGAGACGATATACAAGGAATTCTGTGTGTATAATGACGCAGATGATACTCTAGATTTCACATTTAGTCCCAGCAGGACAAGCTCCAATTCATATGCCTTTATCAATGGAATTGAAATTGTGTCTATGCCACCTAACCTTTACTACAATACATCTGAGAGTCATAGGCTTAATTATGAGGGAAACAAAGTAAGTTATCACATTGAAAACAGCACAGCTCTTGAGATGGTCTACCGTATCAACATTGGTGGAAAGAGACTCTCATCCATGGAAGACACTGGCATGTACCGCAGTTGGGATGGTAATGATGACATGTACTTGGATGATTTAAGTAGAAGATTCAGCGTTATACCAGCAAACACGAGTATTCAACTCAAGTTTGGAAGCATACCTGAATACACTGCGCCGGATGAGGTTTACCGCACTGGCCGTTCAATGGGGATGAACAAAACCATCAACAACAAGAGCTACAATCTCACCTGGGAATTTCCTGTAGATTCACGAATTTCTTACATGGTTAGGCTCCATTTTTGTGAGTTTGAACCTGAGATTGCCAACAACGGAGACCGAATGTTTCAACTTTACATTGCAAATCAAACTGCTGAAAAAGAAGCGGACATAGTCATGTGGAGTGGTGGAAATGGGATTCCAACGTACAGAGACTATTTCGTGTTCATGTCTGACTCTGGAGGCCGGAGGAAAGTAAATCTTTCTGTCTCATTGCAAGCGAATTGGCAGACTACGTATCCTGATGCGATCTTGAATGGGCTCGAAATCTTCAAACTATTTGACTCTAACGGCAATAATATTGATCTGAATCTAGACCCACGACCAGAGGGGACACCACCACCACAAGCGCAAGCGCGCAAAATTCCAAACAAGTCGACTCCGGTGATTGCCATCATTGCAGGTGTACTTTCCAGCATGCTTGTGTTCTTTGTCCTCGGATTTTTGGTCATCAAGCGAAGATGGAAAGCCAACGACTCCAGCTCCAGAGACAGGGCGACACAGTCTACCATGAACCTTGGATCACCATTACCATCTTATTTTTGTCGTTACTTTTCACTGGCAGAGATCAAGGCTGCCACCAAAAACTTCAATGATACCTTCATTATTGGAGCGGGAGGATTTGGCAACGTCTACAAAGGATGCATTGATGGTGGAGCCACTCCAGTCGCAATTAAAAGACTAAAACCAGAGTCATCCCAGGGTGCCCACGAGTTTAAGACGGAAATTGAGATGCTCTCCCAACTTCGTCATCGCCATTTGGTTTCGCTCATTGGATATTGTGCTGAGAAAGGTGAGATGATCTTAGTGTATGATTACATGGCCTGTGGAACCCTTCGCGACCATCTCTACCACACCAATAACCCACCTCTTCCTTGGGAGCAACGGCTTCAGATTTGTATTGGAACAGCCCGTGGGTTGCAATACCTCCACAGTGGCGCGAAGGGCACCATCATACACCGTGATGTGAAAAGCACAAACATCTTATTGGATGACAAATGGGTGGCCAAAGTTTCAGATTTTGGGTTGTCCAAGGGCACGAATACCATGTCCAAAACCCACATCAGCACGGTGGTGAAAGGCAGTTTTGGGTACCTGGACCCGGAATACTACCGCCGACAACGTTTGACTGAGAAGTCAGACGTGTACTCACTTGGGGTACTGTTGTTTGAGGTGTTGTGTGCAAGGCCAGCAGTGATTCAGACAGAAGAGCTGAAGCAAGTGAGCCTGGCTGAGTGGGCCAAGAGCTGTCATCAGAATGGGGAAATTGATCAAATCATTGATCCAAGTTTGAGAGGTAAGATCGCAGCCGAGTGCCTGAATAAGTTCACCGAGATAGCTATCAGTTGCATGCATGACAATGGAACAGAACGGCCGTCCATGACAGATGTCGTTAGGGGCCTTGAACTTGCATTGCAGCTTCAGCAGAGTGCAGAAGGGAATATCAACTGCACTGAAATGAATGTTGAAACTGAAACAAGCAGCAGTGAGCAAAGTTGTGCCACCAAAGATTCCATTAAATGTATATCTGCAACAATCTTCTCTGAGATCAACAACCCGAGTGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

849

Amino Acids

95.3

Weight (kDa)

6.07

Isoelectric Point (pI)

48.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	37 - 418	4.4e-30	Malectin-like domain
Malectin	PF11721	234 - 382	8.2e-09	Malectin domain
Pkinase	PF00069	528 - 791	1.6e-45	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	529 - 793	5.4e-50	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1370
AasI	GACNNNNNNGTC	1 cut(s)	2113
Acc36I	ACCTGC	1 cut(s)	1370
Acc65I	GGTACC	1 cut(s)	2070
AccB1I	GGYRCC	3 cut(s)	1682, 1925, 2070
AccBSI	CCGCTC	1 cut(s)	1592
AccI	GTMKAC	4 cut(s)	702, 1355, 1484, 1611
AccII	CGCG	3 cut(s)	1336, 1818, 1919
AciI	CCGC	6 cut(s)	283, 760, 892, 1085, 1592, 2092
AclI	AACGTT	1 cut(s)	2101
AclWI	GGATC	3 cut(s)	137, 1507, 2255
AcoI	YGGCCR	4 cut(s)	63, 898, 1983, 2351
AcsI	RAATTY	6 cut(s)	182, 299, 491, 956, 975, 1341
AcuI	CTGAAG	5 cut(s)	243, 411, 1853, 2213, 2384
AfaI	GTAC	7 cut(s)	758, 788, 1127, 1386, 2072, 2126, 2139
AfiI	CCNNNNNNNGG	4 cut(s)	766, 907, 1470, 2080
AflIII	ACRYGT	2 cut(s)	783, 2121
AjiI	CACGTC	1 cut(s)	2122
AjnI	CCWGG	6 cut(s)	208, 325, 950, 1677, 2073, 2205
AleI	CACNNNNGTG	1 cut(s)	2051
Alw26I	GTCTC	6 cut(s)	470, 721, 1029, 1125, 1192, 1461
AlwI	GGATC	3 cut(s)	137, 1507, 2255
AlwNI	CAGNNNCTG	1 cut(s)	464
Ama87I	CYCGRG	1 cut(s)	2536
ApeKI	GCWGC	4 cut(s)	1553, 2285, 2395, 2460
ApoI	RAATTY	6 cut(s)	182, 299, 491, 956, 975, 1341
ArsI	GACNNNNNNTTYG	2 cut(s)	2012, 2044
Asp700I	GAANNNNTTC	1 cut(s)	2303
Asp718I	GGTACC	1 cut(s)	2070
AspLEI	GCGC	5 cut(s)	877, 1330, 1336, 1338, 1919
AspS9I	GGNCC	3 cut(s)	2077, 2217, 2377
AsuC2I	CCSGG	1 cut(s)	2081
AsuHPI	GGTGA	7 cut(s)	373, 940, 1375, 1494, 1784, 2065, 2299
AsuII	TTCGAA	1 cut(s)	297
AvaI	CYCGRG	1 cut(s)	2536
AvaII	GGWCC	1 cut(s)	2077
BaeGI	GKGCMC	3 cut(s)	1687, 1928, 2018
BaeI	ACNNNNGTAYC	2 cut(s)	2129, 2162
BalI	TGGCCA	2 cut(s)	65, 1985
BanI	GGYRCC	3 cut(s)	1682, 1925, 2070
BanII	GRGCYC	1 cut(s)	1242
BauI	CACGAG	2 cut(s)	832, 1688
BbsI	GAAGAC	1 cut(s)	750
BbvI	GCAGC	4 cut(s)	1540, 2297, 2407, 2472
BccI	CCATC	9 cut(s)	691, 764, 932, 1379, 1434, 1519, 1622, 1830, 1937
BceAI	ACGGC	5 cut(s)	885, 1285, 1880, 2338, 2366
BciT130I	CCWGG	6 cut(s)	210, 327, 952, 1679, 2075, 2207
BciVI	GTATCC	1 cut(s)	1227
BclI	TGATCA	2 cut(s)	57, 2248
BcnI	CCSGG	1 cut(s)	2081
BcoDI	GTCTC	6 cut(s)	470, 721, 1029, 1125, 1192, 1461
BfaI	CTAG	2 cut(s)	524, 1292
BfmI	CTRYAG	1 cut(s)	963
BfuAI	ACCTGC	1 cut(s)	1370
BfuI	GTATCC	1 cut(s)	1227
BisI	GCNGC	4 cut(s)	1554, 2286, 2396, 2461
BlsI	GCNGC	4 cut(s)	1555, 2287, 2397, 2462
Bme1390I	CCNGG	7 cut(s)	210, 327, 952, 1679, 2075, 2081, 2207
Bme18I	GGWCC	1 cut(s)	2077
BmeT110I	CYCGRG	1 cut(s)	2536
BmgBI	CACGTC	1 cut(s)	2122
BmgT120I	GGNCC	3 cut(s)	2077, 2217, 2377
BmiI	GGNNCC	9 cut(s)	121, 995, 1636, 1684, 1810, 1927, 2072, 2079, 2378
BmrFI	CCNGG	7 cut(s)	210, 327, 952, 1679, 2075, 2081, 2207
BmsI	GCATC	3 cut(s)	1213, 1610, 1701
BoxI	GACNNNNGTC	1 cut(s)	2366
BpiI	GAAGAC	1 cut(s)	750
BplI	GAGNNNNNCTC	2 cut(s)	1700, 1732
BpmI	CTGGAG	5 cut(s)	309, 1179, 1441, 1447, 1626
Bpu14I	TTCGAA	1 cut(s)	297
BpuEI	CTTGAG	2 cut(s)	713, 830
BpuMI	CCSGG	1 cut(s)	2081
Bsa29I	ATCGAT	1 cut(s)	141
BsaAI	YACGTR	1 cut(s)	1215
BsaBI	GATNNNNATC	3 cut(s)	1287, 1370, 2318
BsaI	GGTCTC	1 cut(s)	1029
BsaJI	CCNNGG	9 cut(s)	738, 951, 1414, 1495, 1677, 1678, 1853, 1891, 2010
BsaWI	WCCGGW	1 cut(s)	1360
BsaXI	ACNNNNNCTCC	3 cut(s)	31, 1445, 1475
Bsc4I	CCNNNNNNNGG	4 cut(s)	766, 907, 1470, 2080
Bse1I	ACTGG	4 cut(s)	754, 901, 1542, 1643
Bse3DI	GCAATG	5 cut(s)	318, 1056, 1190, 1374, 2390
Bse8I	GATNNNNATC	3 cut(s)	1287, 1370, 2318
BseBI	CCWGG	6 cut(s)	210, 327, 952, 1679, 2075, 2207
BseCI	ATCGAT	1 cut(s)	141
BseDI	CCNNGG	9 cut(s)	738, 951, 1414, 1495, 1677, 1678, 1853, 1891, 2010
BseGI	GGATG	9 cut(s)	48, 734, 775, 799, 886, 918, 1625, 1673, 1975
BseJI	GATNNNNATC	3 cut(s)	1287, 1370, 2318
BseLI	CCNNNNNNNGG	4 cut(s)	766, 907, 1470, 2080
BseMI	GCAATG	5 cut(s)	318, 1056, 1190, 1374, 2390
BseMII	CTCAG	8 cut(s)	257, 456, 618, 1008, 1755, 2100, 2202, 2514
BseNI	ACTGG	4 cut(s)	754, 901, 1542, 1643
BsePI	GCGCGC	1 cut(s)	1334
BseRI	GAGGAG	2 cut(s)	9, 112
BseSI	GKGCMC	3 cut(s)	1687, 1928, 2018
BseX3I	CGGCCG	1 cut(s)	2351
BseXI	GCAGC	4 cut(s)	1540, 2297, 2407, 2472
BseYI	CCCAGC	1 cut(s)	542
BsgI	GTGCAG	2 cut(s)	2413, 2430
Bsh1236I	CGCG	3 cut(s)	1336, 1818, 1919
Bsh1285I	CGRYCG	1 cut(s)	2354
BshNI	GGYRCC	3 cut(s)	1682, 1925, 2070
BshVI	ATCGAT	1 cut(s)	141
BsiEI	CGRYCG	1 cut(s)	2354
BsiHKCI	CYCGRG	1 cut(s)	2536
BsiSI	CCGG	6 cut(s)	52, 92, 878, 1165, 1361, 2081
BslFI	GGGAC	2 cut(s)	525, 1324
BslI	CCNNNNNNNGG	4 cut(s)	766, 907, 1470, 2080
BsmAI	GTCTC	6 cut(s)	470, 721, 1029, 1125, 1192, 1461
BsmBI	CGTCTC	1 cut(s)	470
BsmFI	GGGAC	2 cut(s)	525, 1324
Bso31I	GGTCTC	1 cut(s)	1029
BsoBI	CYCGRG	1 cut(s)	2536
Bsp119I	TTCGAA	1 cut(s)	297
Bsp1286I	GDGCHC	4 cut(s)	1242, 1687, 1928, 2018
Bsp19I	CCATGG	1 cut(s)	738
Bsp68I	TCGCGA	1 cut(s)	1818
BspACI	CCGC	6 cut(s)	283, 760, 892, 1085, 1592, 2092
BspCNI	CTCAG	8 cut(s)	256, 457, 619, 1009, 1756, 2101, 2203, 2515
BspDI	ATCGAT	1 cut(s)	141
BspFNI	CGCG	3 cut(s)	1336, 1818, 1919
BspLI	GGNNCC	9 cut(s)	121, 995, 1636, 1684, 1810, 1927, 2072, 2079, 2378
BspMI	ACCTGC	1 cut(s)	1370
BspPI	GGATC	3 cut(s)	137, 1507, 2255
BspQI	GCTCTTC	1 cut(s)	2181
BspT104I	TTCGAA	1 cut(s)	297
BspT107I	GGYRCC	3 cut(s)	1682, 1925, 2070
BspTNI	GGTCTC	1 cut(s)	1029
BsrBI	CCGCTC	1 cut(s)	1592
BsrDI	GCAATG	5 cut(s)	318, 1056, 1190, 1374, 2390
BsrI	ACTGG	4 cut(s)	754, 901, 1542, 1643
BssECI	CCNNGG	9 cut(s)	738, 951, 1414, 1495, 1677, 1678, 1853, 1891, 2010
BssHII	GCGCGC	1 cut(s)	1334
BssSI	CACGAG	2 cut(s)	832, 1688
BssT1I	CCWWGG	4 cut(s)	738, 1495, 1853, 2010
Bst2BI	CACGAG	2 cut(s)	832, 1688
Bst2UI	CCWGG	6 cut(s)	210, 327, 952, 1679, 2075, 2207
Bst4CI	ACNGT	7 cut(s)	412, 707, 1482, 1913, 1940, 2050, 2142
Bst6I	CTCTTC	2 cut(s)	1854, 2181
BstBAI	YACGTR	1 cut(s)	1215
BstBI	TTCGAA	1 cut(s)	297
BstC8I	GCNNGC	7 cut(s)	283, 1197, 1332, 1336, 1397, 2169, 2330
BstDEI	CTNAG	9 cut(s)	243, 465, 627, 1017, 1764, 1783, 2109, 2211, 2523
BstDSI	CCRYGG	2 cut(s)	738, 1891
BstF5I	GGATG	9 cut(s)	48, 734, 775, 799, 886, 918, 1625, 1673, 1975
BstFNI	CGCG	3 cut(s)	1336, 1818, 1919
BstHHI	GCGC	5 cut(s)	877, 1330, 1336, 1338, 1919
BstMAI	GTCTC	6 cut(s)	470, 721, 1029, 1125, 1192, 1461
BstMCI	CGRYCG	1 cut(s)	2354
BstMWI	GCNNNNNNNGC	9 cut(s)	233, 291, 552, 759, 1376, 1923, 2168, 2216, 2401
BstNI	CCWGG	6 cut(s)	210, 327, 952, 1679, 2075, 2207
BstNSI	RCATGY	4 cut(s)	757, 787, 1399, 2332
BstPAI	GACNNNNGTC	1 cut(s)	2366
BstSCI	CCNGG	7 cut(s)	208, 325, 950, 1677, 2073, 2079, 2205
BstSFI	CTRYAG	1 cut(s)	963
BstSLI	GKGCMC	3 cut(s)	1687, 1928, 2018
BstSNI	TACGTA	1 cut(s)	1215
BstUI	CGCG	3 cut(s)	1336, 1818, 1919
BstV1I	GCAGC	4 cut(s)	1540, 2297, 2407, 2472
BstV2I	GAAGAC	1 cut(s)	750
BstZI	CGGCCG	1 cut(s)	2351
Bsu15I	ATCGAT	1 cut(s)	141
BsuI	GTATCC	1 cut(s)	1227
BsuTUI	ATCGAT	1 cut(s)	141
BtgI	CCRYGG	2 cut(s)	738, 1891
BtgZI	GCGATG	1 cut(s)	1715
BtrI	CACGTC	1 cut(s)	2122
BtsCI	GGATG	9 cut(s)	48, 734, 775, 799, 886, 918, 1625, 1673, 1975
BtsI	GCAGTG	3 cut(s)	870, 2178, 2470
BtsIMutI	CAGTG	9 cut(s)	417, 747, 870, 894, 1535, 1918, 2178, 2430, 2470
BtuMI	TCGCGA	1 cut(s)	1818
BveI	ACCTGC	1 cut(s)	1370
Cac8I	GCNNGC	7 cut(s)	283, 1197, 1332, 1336, 1397, 2169, 2330
CaiI	CAGNNNCTG	1 cut(s)	464
CfoI	GCGC	5 cut(s)	877, 1330, 1336, 1338, 1919
Cfr13I	GGNCC	3 cut(s)	2077, 2217, 2377
ClaI	ATCGAT	1 cut(s)	141
CseI	GACGC	1 cut(s)	518
CsiI	ACCWGGT	1 cut(s)	208
Csp6I	GTAC	7 cut(s)	757, 787, 1126, 1385, 2071, 2125, 2138
CspCI	CAANNNNNGTGG	3 cut(s)	700, 735, 2521
CviQI	GTAC	7 cut(s)	757, 787, 1126, 1385, 2071, 2125, 2138
DdeI	CTNAG	9 cut(s)	243, 465, 627, 1017, 1764, 1783, 2109, 2211, 2523
DrdI	GACNNNNNNGTC	1 cut(s)	2113
DseDI	GACNNNNNNGTC	1 cut(s)	2113
EaeI	YGGCCR	4 cut(s)	63, 898, 1983, 2351
EagI	CGGCCG	1 cut(s)	2351
Eam1104I	CTCTTC	2 cut(s)	1854, 2181
EarI	CTCTTC	2 cut(s)	1854, 2181
EclXI	CGGCCG	1 cut(s)	2351
Eco105I	TACGTA	1 cut(s)	1215
Eco130I	CCWWGG	4 cut(s)	738, 1495, 1853, 2010
Eco24I	GRGCYC	1 cut(s)	1242
Eco31I	GGTCTC	1 cut(s)	1029
Eco47I	GGWCC	1 cut(s)	2077
Eco52I	CGGCCG	1 cut(s)	2351
Eco57I	CTGAAG	5 cut(s)	243, 411, 1853, 2213, 2384
Eco88I	CYCGRG	1 cut(s)	2536
EcoO109I	RGGNCCY	1 cut(s)	2377
EcoRI	GAATTC	1 cut(s)	491
EcoRII	CCWGG	6 cut(s)	208, 325, 950, 1677, 2073, 2205
EcoT14I	CCWWGG	4 cut(s)	738, 1495, 1853, 2010
EcoT22I	ATGCAT	2 cut(s)	1625, 2334
EcoT38I	GRGCYC	1 cut(s)	1242
ErhI	CCWWGG	4 cut(s)	738, 1495, 1853, 2010
Esp3I	CGTCTC	1 cut(s)	470
FalI	AAGNNNNNCTT	2 cut(s)	1164, 1196
FaqI	GGGAC	2 cut(s)	525, 1324
FauI	CCCGC	2 cut(s)	290, 1585
FauNDI	CATATG	1 cut(s)	565
FbaI	TGATCA	2 cut(s)	57, 2248
FblI	GTMKAC	4 cut(s)	702, 1355, 1484, 1611
Fnu4HI	GCNGC	4 cut(s)	1554, 2286, 2396, 2461
FokI	GGATG	9 cut(s)	35, 721, 782, 806, 893, 925, 1632, 1660, 1982
FriOI	GRGCYC	1 cut(s)	1242
Fsp4HI	GCNGC	4 cut(s)	1554, 2286, 2396, 2461
FspBI	CTAG	2 cut(s)	524, 1292
GlaI	GCGC	5 cut(s)	876, 1329, 1335, 1337, 1918
GluI	GCNGC	4 cut(s)	1554, 2286, 2396, 2461
GsaI	CCCAGC	1 cut(s)	546
GsuI	CTGGAG	5 cut(s)	309, 1179, 1441, 1447, 1626
HapII	CCGG	6 cut(s)	52, 92, 878, 1165, 1361, 2081
HgaI	GACGC	1 cut(s)	518
HhaI	GCGC	5 cut(s)	877, 1330, 1336, 1338, 1919
Hin6I	GCGC	5 cut(s)	875, 1328, 1334, 1336, 1917
HinP1I	GCGC	5 cut(s)	875, 1328, 1334, 1336, 1917
HincII	GTYRAC	1 cut(s)	1356
HindII	GTYRAC	1 cut(s)	1356
HpaII	CCGG	6 cut(s)	52, 92, 878, 1165, 1361, 2081
HphI	GGTGA	7 cut(s)	373, 940, 1375, 1494, 1784, 2065, 2299
Hpy166II	GTNNAC	8 cut(s)	703, 889, 1356, 1385, 1485, 1612, 2125, 2307
Hpy8I	GTNNAC	8 cut(s)	703, 889, 1356, 1385, 1485, 1612, 2125, 2307
HpyAV	CCTTC	5 cut(s)	437, 1588, 1823, 1915, 2408
HpyCH4III	ACNGT	7 cut(s)	412, 707, 1482, 1913, 1940, 2050, 2142
HpyCH4IV	ACGT	6 cut(s)	27, 1124, 1214, 1608, 2101, 2121
HpyF10VI	GCNNNNNNNGC	9 cut(s)	233, 291, 552, 759, 1376, 1923, 2168, 2216, 2401
HpyF3I	CTNAG	9 cut(s)	243, 465, 627, 1017, 1764, 1783, 2109, 2211, 2523
HpySE526I	ACGT	6 cut(s)	27, 1124, 1214, 1608, 2101, 2121
HspAI	GCGC	5 cut(s)	875, 1328, 1334, 1336, 1917
KpnI	GGTACC	1 cut(s)	2074
Ksp22I	TGATCA	2 cut(s)	57, 2248
LguI	GCTCTTC	1 cut(s)	2181
LmnI	GCTCC	9 cut(s)	22, 125, 328, 560, 999, 1466, 1589, 1634, 1858
Lsp1109I	GCAGC	4 cut(s)	1540, 2297, 2407, 2472
LweI	GCATC	3 cut(s)	1213, 1610, 1701
MabI	ACCWGGT	1 cut(s)	208
MaeI	CTAG	2 cut(s)	524, 1292
MaeII	ACGT	6 cut(s)	27, 1124, 1214, 1608, 2101, 2121
MaeIII	GTNAC	3 cut(s)	212, 406, 1526
MbiI	CCGCTC	1 cut(s)	1592
MboII	GAAGA	7 cut(s)	755, 819, 1240, 1449, 1841, 2198, 2509
MhlI	GDGCHC	4 cut(s)	1242, 1687, 1928, 2018
MlsI	TGGCCA	2 cut(s)	65, 1985
MluNI	TGGCCA	2 cut(s)	65, 1985
MlyI	GAGTC	8 cut(s)	80, 640, 723, 1148, 1256, 1351, 1448, 1679
MmeI	TCCRAC	2 cut(s)	145, 1145
Mox20I	TGGCCA	2 cut(s)	65, 1985
Mph1103I	ATGCAT	2 cut(s)	1625, 2334
MroXI	GAANNNNTTC	1 cut(s)	2303
MscI	TGGCCA	2 cut(s)	65, 1985
MseI	TTAA	5 cut(s)	642, 800, 1653, 1695, 2496
MslI	CAYNNNNRTG	9 cut(s)	752, 1002, 1094, 1400, 1941, 2051, 2235, 2337, 2435
Msp20I	TGGCCA	2 cut(s)	65, 1985
MspI	CCGG	6 cut(s)	52, 92, 878, 1165, 1361, 2081
MspR9I	CCNGG	7 cut(s)	210, 327, 952, 1679, 2075, 2081, 2207
MvaI	CCWGG	6 cut(s)	210, 327, 952, 1679, 2075, 2207
MvnI	CGCG	3 cut(s)	1336, 1818, 1919
MwoI	GCNNNNNNNGC	9 cut(s)	233, 291, 552, 759, 1376, 1923, 2168, 2216, 2401
NciI	CCSGG	1 cut(s)	2081
NcoI	CCATGG	1 cut(s)	738
NdeI	CATATG	1 cut(s)	565
NlaIV	GGNNCC	9 cut(s)	121, 995, 1636, 1684, 1810, 1927, 2072, 2079, 2378
NmeAIII	GCCGAG	2 cut(s)	287, 2314
NmuCI	GTSAC	1 cut(s)	406
NruI	TCGCGA	1 cut(s)	1818
NsiI	ATGCAT	2 cut(s)	1625, 2334
NspI	RCATGY	4 cut(s)	757, 787, 1399, 2332
NspV	TTCGAA	1 cut(s)	297
OliI	CACNNNNGTG	1 cut(s)	2051
PaeI	GCATGC	2 cut(s)	1399, 2332
PaqCI	CACCTGC	1 cut(s)	1370
PasI	CCCWGGG	1 cut(s)	1678
PauI	GCGCGC	1 cut(s)	1334
PciI	ACATGT	1 cut(s)	783
PciSI	GCTCTTC	1 cut(s)	2181
PdmI	GAANNNNTTC	1 cut(s)	2303
PfeI	GAWTC	6 cut(s)	810, 968, 1117, 1288, 2176, 2489
PflFI	GACNNNGTC	2 cut(s)	1091, 1480
PkrI	GCNGC	4 cut(s)	1555, 2287, 2397, 2462
PleI	GAGTC	8 cut(s)	79, 639, 723, 1148, 1256, 1351, 1448, 1678
PpsI	GAGTC	8 cut(s)	79, 639, 723, 1148, 1256, 1351, 1448, 1678
Ppu21I	YACGTR	1 cut(s)	1215
PscI	ACATGT	1 cut(s)	783
PshAI	GACNNNNGTC	1 cut(s)	2366
Psp1406I	AACGTT	1 cut(s)	2101
Psp6I	CCWGG	6 cut(s)	208, 325, 950, 1677, 2073, 2205
PspFI	CCCAGC	1 cut(s)	542
PspGI	CCWGG	6 cut(s)	208, 325, 950, 1677, 2073, 2205
PspN4I	GGNNCC	9 cut(s)	121, 995, 1636, 1684, 1810, 1927, 2072, 2079, 2378
PspPI	GGNCC	3 cut(s)	2077, 2217, 2377
PstNI	CAGNNNCTG	1 cut(s)	464
PsyI	GACNNNGTC	2 cut(s)	1091, 1480
PteI	GCGCGC	1 cut(s)	1334
RruI	TCGCGA	1 cut(s)	1818
RsaI	GTAC	7 cut(s)	758, 788, 1127, 1386, 2072, 2126, 2139
RsaNI	GTAC	7 cut(s)	757, 787, 1126, 1385, 2071, 2125, 2138
RseI	CAYNNNNRTG	9 cut(s)	752, 1002, 1094, 1400, 1941, 2051, 2235, 2337, 2435
SalI	GTCGAC	1 cut(s)	1354
SapI	GCTCTTC	1 cut(s)	2181
SaqAI	TTAA	5 cut(s)	642, 800, 1653, 1695, 2496
SatI	GCNGC	4 cut(s)	1554, 2286, 2396, 2461
Sau96I	GGNCC	3 cut(s)	2077, 2217, 2377
SchI	GAGTC	8 cut(s)	80, 640, 723, 1148, 1256, 1351, 1448, 1679
ScrFI	CCNGG	7 cut(s)	210, 327, 952, 1679, 2075, 2081, 2207
SduI	GDGCHC	4 cut(s)	1242, 1687, 1928, 2018
SexAI	ACCWGGT	1 cut(s)	208
SfaNI	GCATC	3 cut(s)	1213, 1610, 1701
SfcI	CTRYAG	1 cut(s)	963
SfuI	TTCGAA	1 cut(s)	297
SinI	GGWCC	1 cut(s)	2077
SmiMI	CAYNNNNRTG	9 cut(s)	752, 1002, 1094, 1400, 1941, 2051, 2235, 2337, 2435
SmlI	CTYRAG	2 cut(s)	692, 845
SmoI	CTYRAG	2 cut(s)	692, 845
SnaBI	TACGTA	1 cut(s)	1215
SphI	GCATGC	2 cut(s)	1399, 2332
SsiI	CCGC	6 cut(s)	283, 760, 892, 1085, 1592, 2092
SspI	AATATT	1 cut(s)	1279
SspMI	CTAG	2 cut(s)	524, 1292
StyD4I	CCNGG	7 cut(s)	208, 325, 950, 1677, 2073, 2079, 2205
StyI	CCWWGG	4 cut(s)	738, 1495, 1853, 2010
TaaI	ACNGT	7 cut(s)	412, 707, 1482, 1913, 1940, 2050, 2142
TaiI	ACGT	6 cut(s)	30, 1127, 1217, 1611, 2104, 2124
TaqI	TCGA	4 cut(s)	141, 297, 1242, 1355
TaqII	GACCGA	1 cut(s)	1053
TatI	WGTACW	3 cut(s)	786, 1384, 2124
TfiI	GAWTC	6 cut(s)	810, 968, 1117, 1288, 2176, 2489
Tru1I	TTAA	5 cut(s)	642, 800, 1653, 1695, 2496
Tru9I	TTAA	5 cut(s)	642, 800, 1653, 1695, 2496
TscAI	CASTG	9 cut(s)	417, 754, 877, 901, 1542, 1918, 2178, 2437, 2470
TseFI	GTSAC	1 cut(s)	406
TseI	GCWGC	4 cut(s)	1553, 2285, 2395, 2460
Tsp45I	GTSAC	1 cut(s)	406
TspDTI	ATGAA	7 cut(s)	17, 552, 929, 1135, 1505, 1570, 2453
TspGWI	ACGGA	2 cut(s)	1047, 1715
TspRI	CASTG	9 cut(s)	417, 754, 877, 901, 1542, 1918, 2178, 2437, 2470
Tth111I	GACNNNGTC	2 cut(s)	1091, 1480
VpaK11BI	GGWCC	1 cut(s)	2077
XapI	RAATTY	6 cut(s)	182, 299, 491, 956, 975, 1341
XbaI	TCTAGA	2 cut(s)	523, 1291
XceI	RCATGY	4 cut(s)	757, 787, 1399, 2332
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1851
XmiI	GTMKAC	4 cut(s)	702, 1355, 1484, 1611
XmnI	GAANNNNTTC	1 cut(s)	2303
XspI	CTAG	2 cut(s)	524, 1292
Zsp2I	ATGCAT	2 cut(s)	1625, 2334

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.