Rorug02G0515300

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
64632240 .. 64632789
550 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0515300.1

Sequence Viewer

Length: 324 bp
ATGACAATGATCAGGAGGAGTACTGCTACTGGTTTCTGGGTAGGCATGGCCGTCGTCATTATTCTGTGTGCCGTTTGGGTTGAAGAAGTAGAGGGATGGACAGACCTTGGGCCCTGTGGACGTGGTACAAGAGGTGGCATGAATGATCCAACCTGCTTCTGGGCGAAGGCCGGCAAGGGCAGCCGAAAGATTGTGAAGAAGCTTGCGGTGTGGGGAAGAACTGAAGTCAGTGTCGATCCAGAAGTCGACGAGAAGCCGGATGGGCCTGCCGATGAATTAGATGATGAGAACATAAATAATAATGTGGTCATAGTTGGACACTGA

Protein Analysis

107

Amino Acids

11.66

Weight (kDa)

4.91

Isoelectric Point (pI)

17.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 161
AccI GTMKAC 1 cut(s) 246
AciI CCGC 1 cut(s) 206
AclWI GGATC 2 cut(s) 140, 230
AcoI YGGCCR 1 cut(s) 48
AcuI CTGAAG 1 cut(s) 243
AfaI GTAC 2 cut(s) 22, 127
AfiI CCNNNNNNNGG 1 cut(s) 159
AgsI TTSAA 1 cut(s) 83
AjiI CACGTC 1 cut(s) 122
AluBI AGCT 1 cut(s) 202
AluI AGCT 1 cut(s) 202
AlwI GGATC 2 cut(s) 140, 230
AoxI GGCC 4 cut(s) 48, 110, 168, 263
ApaI GGGCCC 1 cut(s) 114
ApeKI GCWGC 1 cut(s) 180
AspS9I GGNCC 3 cut(s) 110, 111, 263
BaeGI GKGCMC 1 cut(s) 114
BanII GRGCYC 1 cut(s) 114
BbvI GCAGC 1 cut(s) 192
BccI CCATC 2 cut(s) 90, 254
BceAI ACGGC 2 cut(s) 35, 56
BcgI CGANNNNNNTGC 2 cut(s) 34, 68
BclI TGATCA 1 cut(s) 9
BfuAI ACCTGC 1 cut(s) 161
BglI GCCNNNNNGGC 1 cut(s) 262
BisI GCNGC 1 cut(s) 181
BlsI GCNGC 1 cut(s) 182
BmcAI AGTACT 1 cut(s) 22
BmgBI CACGTC 1 cut(s) 122
BmgT120I GGNCC 3 cut(s) 110, 111, 263
BmiI GGNNCC 1 cut(s) 112
BsaJI CCNNGG 1 cut(s) 106
Bsc4I CCNNNNNNNGG 1 cut(s) 159
Bse118I RCCGGY 1 cut(s) 170
Bse1I ACTGG 1 cut(s) 34
BseDI CCNNGG 1 cut(s) 106
BseGI GGATG 2 cut(s) 101, 265
BseLI CCNNNNNNNGG 1 cut(s) 159
BseNI ACTGG 1 cut(s) 34
BseRI GAGGAG 1 cut(s) 31
BseSI GKGCMC 1 cut(s) 114
BseXI GCAGC 1 cut(s) 192
BshFI GGCC 4 cut(s) 50, 112, 170, 265
BsiSI CCGG 2 cut(s) 171, 257
BslI CCNNNNNNNGG 1 cut(s) 159
BsnI GGCC 4 cut(s) 50, 112, 170, 265
Bsp120I GGGCCC 1 cut(s) 110
Bsp1286I GDGCHC 1 cut(s) 114
Bsp143I GATC 3 cut(s) 9, 145, 235
BspACI CCGC 1 cut(s) 206
BspANI GGCC 4 cut(s) 50, 112, 170, 265
BspLI GGNNCC 1 cut(s) 112
BspMI ACCTGC 1 cut(s) 161
BspPI GGATC 2 cut(s) 140, 230
BsrFI RCCGGY 1 cut(s) 170
BsrI ACTGG 1 cut(s) 34
BssAI RCCGGY 1 cut(s) 170
BssECI CCNNGG 1 cut(s) 106
BssMI GATC 3 cut(s) 9, 145, 235
BssT1I CCWWGG 1 cut(s) 106
BstC8I GCNNGC 3 cut(s) 172, 204, 267
BstF5I GGATG 2 cut(s) 101, 265
BstKTI GATC 3 cut(s) 12, 148, 238
BstMBI GATC 3 cut(s) 9, 145, 235
BstMWI GCNNNNNNNGC 2 cut(s) 180, 262
BstSLI GKGCMC 1 cut(s) 114
BstV1I GCAGC 1 cut(s) 192
BsuRI GGCC 4 cut(s) 50, 112, 170, 265
BtrI CACGTC 1 cut(s) 122
BtsCI GGATG 2 cut(s) 101, 265
BtsIMutI CAGTG 2 cut(s) 235, 319
BveI ACCTGC 1 cut(s) 161
Cac8I GCNNGC 3 cut(s) 172, 204, 267
Cfr10I RCCGGY 1 cut(s) 170
Cfr13I GGNCC 3 cut(s) 110, 111, 263
Csp6I GTAC 2 cut(s) 21, 126
CviAII CATG 2 cut(s) 46, 139
CviJI RGCY 7 cut(s) 50, 112, 170, 183, 202, 256, 265
CviKI_1 RGCY 7 cut(s) 50, 112, 170, 183, 202, 256, 265
CviQI GTAC 2 cut(s) 21, 126
DpnI GATC 3 cut(s) 11, 147, 237
DpnII GATC 3 cut(s) 9, 145, 235
EaeI YGGCCR 1 cut(s) 48
Eco130I CCWWGG 1 cut(s) 106
Eco24I GRGCYC 1 cut(s) 114
Eco57I CTGAAG 1 cut(s) 243
EcoO109I RGGNCCY 1 cut(s) 111
EcoT14I CCWWGG 1 cut(s) 106
EcoT38I GRGCYC 1 cut(s) 114
ErhI CCWWGG 1 cut(s) 106
FaeI CATG 2 cut(s) 49, 142
FaiI YATR 4 cut(s) 47, 140, 293, 311
FatI CATG 2 cut(s) 45, 138
FbaI TGATCA 1 cut(s) 9
FblI GTMKAC 1 cut(s) 246
Fnu4HI GCNGC 1 cut(s) 181
FokI GGATG 2 cut(s) 108, 272
FriOI GRGCYC 1 cut(s) 114
Fsp4HI GCNGC 1 cut(s) 181
GluI GCNGC 1 cut(s) 181
HaeIII GGCC 4 cut(s) 50, 112, 170, 265
HapII CCGG 2 cut(s) 171, 257
Hin1II CATG 2 cut(s) 49, 142
HincII GTYRAC 1 cut(s) 247
HindII GTYRAC 1 cut(s) 247
HindIII AAGCTT 1 cut(s) 200
HpaII CCGG 2 cut(s) 171, 257
Hpy166II GTNNAC 2 cut(s) 119, 247
Hpy188III TCNNGA 2 cut(s) 13, 239
Hpy8I GTNNAC 2 cut(s) 119, 247
Hpy99I CGWCG 2 cut(s) 56, 251
HpyAV CCTTC 1 cut(s) 160
HpyCH4IV ACGT 1 cut(s) 121
HpyF10VI GCNNNNNNNGC 2 cut(s) 180, 262
HpySE526I ACGT 1 cut(s) 121
Hsp92II CATG 2 cut(s) 49, 142
KroI GCCGGC 1 cut(s) 170
KroNI GCCGGC 1 cut(s) 172
Ksp22I TGATCA 1 cut(s) 9
Kzo9I GATC 3 cut(s) 9, 145, 235
LpnPI CCDG 9 cut(s) 15, 22, 127, 145, 166, 184, 252, 270, 279
Lsp1109I GCAGC 1 cut(s) 192
MaeII ACGT 1 cut(s) 121
MalI GATC 3 cut(s) 11, 147, 237
MboI GATC 3 cut(s) 9, 145, 235
MboII GAAGA 3 cut(s) 95, 208, 228
MhlI GDGCHC 1 cut(s) 114
MluCI AATT 1 cut(s) 275
MmeI TCCRAC 2 cut(s) 173, 295
MnlI CCTC 3 cut(s) 9, 85, 125
MroNI GCCGGC 1 cut(s) 170
MspI CCGG 2 cut(s) 171, 257
MwoI GCNNNNNNNGC 2 cut(s) 180, 262
NaeI GCCGGC 1 cut(s) 172
NdeII GATC 3 cut(s) 9, 145, 235
NgoMIV GCCGGC 1 cut(s) 170
NlaIII CATG 2 cut(s) 49, 142
NlaIV GGNNCC 1 cut(s) 112
PdiI GCCGGC 1 cut(s) 172
PkrI GCNGC 1 cut(s) 182
PspN4I GGNNCC 1 cut(s) 112
PspOMI GGGCCC 1 cut(s) 110
PspPI GGNCC 3 cut(s) 110, 111, 263
RsaI GTAC 2 cut(s) 22, 127
RsaNI GTAC 2 cut(s) 21, 126
SalI GTCGAC 1 cut(s) 245
SatI GCNGC 1 cut(s) 181
Sau3AI GATC 3 cut(s) 9, 145, 235
Sau96I GGNCC 3 cut(s) 110, 111, 263
ScaI AGTACT 1 cut(s) 22
SduI GDGCHC 1 cut(s) 114
SetI ASST 5 cut(s) 108, 124, 136, 155, 204
Sse9I AATT 1 cut(s) 275
SsiI CCGC 1 cut(s) 206
StyI CCWWGG 1 cut(s) 106
TaiI ACGT 1 cut(s) 124
TaqI TCGA 2 cut(s) 234, 246
TasI AATT 1 cut(s) 275
TatI WGTACW 1 cut(s) 20
TscAI CASTG 1 cut(s) 235
TseI GCWGC 1 cut(s) 180
TspDTI ATGAA 2 cut(s) 155, 288
TspRI CASTG 1 cut(s) 235
XcmI CCANNNNNNNNNTGG 1 cut(s) 156
XmiI GTMKAC 1 cut(s) 246
ZrmI AGTACT 1 cut(s) 22
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.