Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Reverse (-)

27722388 .. 27725110

Gene Structure 2723 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ44658

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2532 bp

ATGAAGCCAGTTCTCATCCCTCTCTACCTTTCTGTGTTTCAGTACATCATCGTCCAACTGCTGGCCGGTCAGTCGCTACCTATATACACTCCTACTGATAATATCACCCTTAACTGTGGCTCATCCGGTGACAATGTCAGTGACTATGATTCTCGAAATTGGAGTGGAGATATCAACTCAAAGCTTTTCCCTATAGAAGTTGGTCGCGCATCCAAAGCTTTGAAAGCACTACCATCGTCCTCCTCGAGAGGTACCGTACGCCACAGCCAAGTACCGTACACCACAGCAAGGCTTTCTTACTCGGAATTCACTTATCCATTTCCCGTCAGTCCGGGCCAGAAGTTCATTCGCTTATACTTCTACCCAGCTTCATACAGCGCCGAGTTCTCCCTCTCTGAGTCTCTTTTCTCTCTCAAAGTCGGTGCCTTCACTCTTCTCAAAGACTTTAACGCTTCTGCAAATGCCGATGCCGATCGATCTGAGACGGTACTCAAAGAATTTTGTACAAACGTTGAGCGAGAACAACAGATCCTTAACATCACATTCACTCCCAGCAAAGAAGCATATGCTTTCATCAACGGGATTGAAATATGGTCGATGCCAACAAATCTTTATTACTCTACTGCTAACTCTCTCAGCAGCAGAAACTCATATCCAGTCAAAAACAGCACAGCTCTACAGATGCTATACCGAATCAATGTTGGCGGAAGCATAGTTTCGCCCAAGGAAGACACCGGCTTGTACCGGACTTGGGATGCCACAGACCTCCTTTATTTGGATGATCAAAGTACAAGACTCAGTGTTCTTCAACAGAACAGGAATGTTGAACTCAAATTTATCAAAATACCAGAGTACATAGCCCCAAAAGTAGTTTACCGAACAGGTCGGTCAATGGGGATGAACAAAACCATCAACGAGAATTACAACCTCACCTGGTTATTTCCGGTAGACTCTAACTTCTCCTACCTGATTAGATTGCATTTTTGTGAGTTTGAGTCTGAAATTACCAAGAGCGGAAACCGGACGTTTAAAATTTACATAGCCAATCAAACTGCTGAACAAGGAGCAGACATAATTCAATGGAGTGGTGGAAATGGGATACCGATATACAGAGACTACATCTTGCTCATGTCTGACCCTGGAAGCCAGAAGAGAGTTAACCTCTCTATTGCGTTGCAAGTTTCCCCACTAGATTGGTTGAGTAGATATACCGATGCATTGATGAATGGGATTGAAATCTTCAAATTATTCAACCCAGATGGCAATAATGTCCCTCTGAAACGCAACCCACCACCAGAGGAGACACCAAAACAGCAAACTTCACACTACAAGATGACAACACAAGTACAAATCATCATTGCTGCTGTTGTGTCCAGCATACTTGTGTTTTTGGTCCTCGGATTTTTGGTCATCAAGCGACGATGGAAAGCTAAGGACACTAACTCCAGCCACAGGATAACGAGGTCAACCATGATCCCGGAGTCACCTTTACCTTCTTATTTGTGTCGTTACTTTTCGCTGGCAGAGATCAAGGCTGCCACCAAAAACTTCAATGATACTTTCATTATTGGAGCTGGAGGATTTGGCAACGTGTACAAAGGATGTATCGAAGGTGGAGTCACTCCAGTTGCAATCAAAAGACTGAAACCAGAGTCATCCCAGGGTGCCCACGAGTTTAAGACGGAAATCGAGATGCTCTCTCAACTTCGTCATCGTCATTTGGTTTCGCTCATTGGATATTGTGCTGATAAAGGTGAGATGATCTTAGTGTACGAGTATATGTCCCGTGGAACCCTTCGTGACCATCTCTACCACAATAATAAACCACCTCTTTCTTGGAAGCAACGGCTTCAGATTTGTATTGGCACAGCCCGCGGGTTGCAATACCTCCACAGTGGTGCGAAGGGCACCATCATACACCGTGATGTGAAGAGCACAAACATCTTATTGGATGACAAATGGGTGGCCAAAGTTTCAGATTTTGGGTTGTCCAAGGGCACGACTAACATGTCCAAAACCCACATCAGCACGGTGGTGAAAGGTAGTTTTGGGTATCTGGACCCGGAGTACTACCGCCGACAACGTCTGACTGAGAAGTCAGACGTGTACTCACTTGGTGTAGTGTTGTTTGAGGTATTGTGTGCAAGGCCAGCAGTGATGCAGGCAGAAGAGCTGAAGCAGGTGAGCCTGGCTGAGTGGGCCAAGAGCTGTCATCAGAATGGGGAAATTGATCAAATCATTGATCCAAGTTTAAGAGGTAAGATCCCAGCCGAGTGCCTGAATAAGTTCACCGAAATAGCTATCAGTTGCATGCATGACAATGGAACAGAACGGCCGTCCATGACTGATGTTGTTAGGGAGCTTGAACTTGCATTGCAGCTTCAGCAGTGTGCAGAAGGGAATATCAACTGCACTGAAAGGATTGTTGAAACTGAACCAAGCAGTAGTGAGCAAAGACATGCCACCAACGATTCCATTAAATGTATATCAGCAACTATCTTCTCTGAGATTAACAACCCAAGTGGGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

843

Amino Acids

94.84

Weight (kDa)

8.59

Isoelectric Point (pI)

47.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	37 - 415	1.4e-30	Malectin-like domain
Malectin	PF11721	257 - 374	3.5e-08	Malectin domain
Pkinase	PF00069	522 - 786	2.9e-47	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	523 - 788	1.1e-52	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2170
AasI	GACNNNNNNGTC	2 cut(s)	2008, 2095
Acc36I	ACCTGC	1 cut(s)	2170
Acc65I	GGTACC	1 cut(s)	251
AccB1I	GGYRCC	4 cut(s)	251, 422, 1664, 1907
AccB7I	CCANNNNNTGG	1 cut(s)	61
AccBSI	CCGCTC	1 cut(s)	1014
AccI	GTMKAC	1 cut(s)	948
AccII	CGCG	2 cut(s)	207, 1875
AciI	CCGC	5 cut(s)	705, 1014, 1873, 1875, 2074
AclI	AACGTT	1 cut(s)	510
AclWI	GGATC	4 cut(s)	523, 1468, 2237, 2257
AcoI	YGGCCR	3 cut(s)	63, 1965, 2333
AcsI	RAATTY	4 cut(s)	305, 497, 833, 1032
AcuI	CTGAAG	3 cut(s)	1835, 2195, 2366
AdeI	CACNNNGTG	1 cut(s)	2117
AfiI	CCNNNNNNNGG	5 cut(s)	61, 288, 751, 775, 1452
AflIII	ACRYGT	3 cut(s)	1590, 2007, 2103
AjiI	CACGTC	1 cut(s)	2104
AjnI	CCWGG	4 cut(s)	932, 1138, 1659, 2187
AleI	CACNNNNGTG	2 cut(s)	1896, 2033
AloI	GAACNNNNNNTCC	2 cut(s)	513, 545
Alw21I	GWGCWC	1 cut(s)	1937
Alw26I	GTCTC	4 cut(s)	405, 476, 1107, 1295
AlwI	GGATC	4 cut(s)	523, 1468, 2237, 2257
Ama87I	CYCGRG	1 cut(s)	244
AoxI	GGCC	6 cut(s)	63, 334, 1965, 2147, 2199, 2333
ApeKI	GCWGC	4 cut(s)	639, 1361, 1535, 2377
ApoI	RAATTY	4 cut(s)	305, 497, 833, 1032
ArsI	GACNNNNNNTTYG	2 cut(s)	1602, 1634
Asp700I	GAANNNNTTC	1 cut(s)	2285
Asp718I	GGTACC	1 cut(s)	251
AspLEI	GCGC	2 cut(s)	209, 380
AspS9I	GGNCC	4 cut(s)	334, 1393, 2059, 2199
AsuC2I	CCSGG	3 cut(s)	333, 1478, 2063
AsuHPI	GGTGA	8 cut(s)	97, 140, 922, 1476, 1766, 2047, 2194, 2281
AvaI	CYCGRG	1 cut(s)	244
AvaII	GGWCC	2 cut(s)	1393, 2059
BaeGI	GKGCMC	3 cut(s)	1669, 1910, 2000
BalI	TGGCCA	1 cut(s)	1967
BanI	GGYRCC	4 cut(s)	251, 422, 1664, 1907
BauI	CACGAG	1 cut(s)	1670
BbsI	GAAGAC	1 cut(s)	735
Bbv12I	GWGCWC	1 cut(s)	1937
BbvI	GCAGC	4 cut(s)	651, 1348, 1522, 2389
BccI	CCATC	6 cut(s)	241, 917, 1253, 1416, 1812, 1919
BceAI	ACGGC	3 cut(s)	1862, 2320, 2348
BcgI	CGANNNNNNTGC	2 cut(s)	216, 250
BciT130I	CCWGG	4 cut(s)	934, 1140, 1661, 2189
BciVI	GTATCC	1 cut(s)	1092
BclI	TGATCA	2 cut(s)	781, 2230
BcnI	CCSGG	3 cut(s)	333, 1478, 2063
BcoDI	GTCTC	4 cut(s)	405, 476, 1107, 1295
BfaI	CTAG	1 cut(s)	1190
BfmI	CTRYAG	2 cut(s)	192, 677
BfoI	RGCGCY	1 cut(s)	381
BfuAI	ACCTGC	1 cut(s)	2170
BfuI	GTATCC	1 cut(s)	1092
BisI	GCNGC	4 cut(s)	640, 1362, 1536, 2378
BlsI	GCNGC	4 cut(s)	641, 1363, 1537, 2379
BmcAI	AGTACT	1 cut(s)	2069
Bme1390I	CCNGG	7 cut(s)	333, 934, 1140, 1478, 1661, 2063, 2189
Bme18I	GGWCC	2 cut(s)	1393, 2059
BmeT110I	CYCGRG	1 cut(s)	244
BmgBI	CACGTC	1 cut(s)	2104
BmgT120I	GGNCC	4 cut(s)	334, 1393, 2059, 2199
BmiI	GGNNCC	6 cut(s)	253, 424, 1666, 1792, 1909, 2061
BmrFI	CCNGG	7 cut(s)	333, 934, 1140, 1478, 1661, 2063, 2189
BmsI	GCATC	8 cut(s)	218, 457, 588, 672, 745, 1204, 1683, 2148
BpiI	GAAGAC	1 cut(s)	735
BplI	GAGNNNNNCTC	4 cut(s)	1146, 1178, 1682, 1714
BpmI	CTGGAG	3 cut(s)	1429, 1596, 1608
Bpu10I	CCTNAGC	1 cut(s)	1431
BpuMI	CCSGG	3 cut(s)	333, 1478, 2063
Bsa29I	ATCGAT	1 cut(s)	475
BsaBI	GATNNNNATC	2 cut(s)	471, 1235
BsaJI	CCNNGG	8 cut(s)	723, 1138, 1396, 1659, 1660, 1786, 1873, 1992
BsaWI	WCCGGW	4 cut(s)	125, 744, 943, 1020
BsaXI	ACNNNNNCTCC	4 cut(s)	532, 562, 1427, 1457
Bsc4I	CCNNNNNNNGG	5 cut(s)	61, 288, 751, 775, 1452
Bse118I	RCCGGY	2 cut(s)	65, 734
Bse1I	ACTGG	3 cut(s)	8, 656, 1625
Bse3DI	GCAATG	2 cut(s)	1356, 2372
Bse8I	GATNNNNATC	2 cut(s)	471, 1235
BseBI	CCWGG	4 cut(s)	934, 1140, 1661, 2189
BseCI	ATCGAT	1 cut(s)	475
BseDI	CCNNGG	8 cut(s)	723, 1138, 1396, 1659, 1660, 1786, 1873, 1992
BseGI	GGATG	9 cut(s)	15, 122, 209, 760, 784, 903, 1607, 1655, 1957
BseJI	GATNNNNATC	2 cut(s)	471, 1235
BseLI	CCNNNNNNNGG	5 cut(s)	61, 288, 751, 775, 1452
BseMI	GCAATG	2 cut(s)	1356, 2372
BseMII	CTCAG	7 cut(s)	387, 471, 649, 811, 2082, 2184, 2496
BseNI	ACTGG	3 cut(s)	8, 656, 1625
BseRI	GAGGAG	2 cut(s)	232, 1313
BseSI	GKGCMC	3 cut(s)	1669, 1910, 2000
BseX3I	CGGCCG	1 cut(s)	2333
BseXI	GCAGC	4 cut(s)	651, 1348, 1522, 2389
BseYI	CCCAGC	3 cut(s)	364, 551, 2266
BsgI	GTGCAG	2 cut(s)	2395, 2412
Bsh1236I	CGCG	2 cut(s)	207, 1875
Bsh1285I	CGRYCG	2 cut(s)	475, 2336
BshFI	GGCC	6 cut(s)	65, 336, 1967, 2149, 2201, 2335
BshNI	GGYRCC	4 cut(s)	251, 422, 1664, 1907
BshVI	ATCGAT	1 cut(s)	475
BsiEI	CGRYCG	2 cut(s)	475, 2336
BsiHKAI	GWGCWC	1 cut(s)	1937
BsiHKCI	CYCGRG	1 cut(s)	244
BsiSI	CCGG	9 cut(s)	66, 126, 332, 735, 745, 944, 1021, 1478, 2063
BsiWI	CGTACG	1 cut(s)	256
BslFI	GGGAC	2 cut(s)	1256, 1768
BslI	CCNNNNNNNGG	5 cut(s)	61, 288, 751, 775, 1452
BsmAI	GTCTC	4 cut(s)	405, 476, 1107, 1295
BsmBI	CGTCTC	1 cut(s)	476
BsmFI	GGGAC	2 cut(s)	1256, 1768
BsnI	GGCC	6 cut(s)	65, 336, 1967, 2149, 2201, 2335
BsoBI	CYCGRG	1 cut(s)	244
Bsp1286I	GDGCHC	4 cut(s)	1669, 1910, 1937, 2000
Bsp1407I	TGTACA	2 cut(s)	503, 1593
BspACI	CCGC	5 cut(s)	705, 1014, 1873, 1875, 2074
BspANI	GGCC	6 cut(s)	65, 336, 1967, 2149, 2201, 2335
BspCNI	CTCAG	7 cut(s)	388, 472, 648, 810, 2083, 2185, 2497
BspDI	ATCGAT	1 cut(s)	475
BspFNI	CGCG	2 cut(s)	207, 1875
BspLI	GGNNCC	6 cut(s)	253, 424, 1666, 1792, 1909, 2061
BspMI	ACCTGC	1 cut(s)	2170
BspPI	GGATC	4 cut(s)	523, 1468, 2237, 2257
BspQI	GCTCTTC	2 cut(s)	1925, 2163
BspT107I	GGYRCC	4 cut(s)	251, 422, 1664, 1907
BsrBI	CCGCTC	1 cut(s)	1014
BsrDI	GCAATG	2 cut(s)	1356, 2372
BsrFI	RCCGGY	2 cut(s)	65, 734
BsrGI	TGTACA	2 cut(s)	503, 1593
BsrI	ACTGG	3 cut(s)	8, 656, 1625
BssAI	RCCGGY	2 cut(s)	65, 734
BssECI	CCNNGG	8 cut(s)	723, 1138, 1396, 1659, 1660, 1786, 1873, 1992
BssSI	CACGAG	1 cut(s)	1670
BssT1I	CCWWGG	2 cut(s)	723, 1992
Bst2BI	CACGAG	1 cut(s)	1670
Bst2UI	CCWGG	4 cut(s)	934, 1140, 1661, 2189
Bst4CI	ACNGT	7 cut(s)	116, 256, 276, 487, 1895, 1922, 2032
Bst6I	CTCTTC	4 cut(s)	438, 1145, 1925, 2163
BstAUI	TGTACA	2 cut(s)	503, 1593
BstC8I	GCNNGC	6 cut(s)	63, 1521, 1873, 2151, 2163, 2312
BstDEI	CTNAG	9 cut(s)	396, 480, 635, 797, 1431, 1765, 2091, 2193, 2505
BstDSI	CCRYGG	2 cut(s)	1786, 1873
BstF5I	GGATG	9 cut(s)	15, 122, 209, 760, 784, 903, 1607, 1655, 1957
BstFNI	CGCG	2 cut(s)	207, 1875
BstH2I	RGCGCY	1 cut(s)	381
BstHHI	GCGC	2 cut(s)	209, 380
BstMAI	GTCTC	4 cut(s)	405, 476, 1107, 1295
BstMCI	CGRYCG	2 cut(s)	475, 2336
BstMWI	GCNNNNNNNGC	6 cut(s)	215, 224, 1872, 2150, 2198, 2383
BstNI	CCWGG	4 cut(s)	934, 1140, 1661, 2189
BstNSI	RCATGY	3 cut(s)	2011, 2314, 2462
BstSCI	CCNGG	7 cut(s)	331, 932, 1138, 1476, 1659, 2061, 2187
BstSFI	CTRYAG	2 cut(s)	192, 677
BstSLI	GKGCMC	3 cut(s)	1669, 1910, 2000
BstUI	CGCG	2 cut(s)	207, 1875
BstV1I	GCAGC	4 cut(s)	651, 1348, 1522, 2389
BstV2I	GAAGAC	1 cut(s)	735
BstX2I	RGATCY	2 cut(s)	528, 2262
BstXI	CCANNNNNNTGG	1 cut(s)	1194
BstYI	RGATCY	2 cut(s)	528, 2262
BstZI	CGGCCG	1 cut(s)	2333
Bsu15I	ATCGAT	1 cut(s)	475
BsuI	GTATCC	1 cut(s)	1092
BsuRI	GGCC	6 cut(s)	65, 336, 1967, 2149, 2201, 2335
BsuTUI	ATCGAT	1 cut(s)	475
BtgI	CCRYGG	2 cut(s)	1786, 1873
BtrI	CACGTC	1 cut(s)	2104
BtsCI	GGATG	9 cut(s)	15, 122, 209, 760, 784, 903, 1607, 1655, 1957
BtsI	GCAGTG	2 cut(s)	2160, 2393
BtsIMutI	CAGTG	6 cut(s)	145, 805, 1900, 2160, 2393, 2412
BveI	ACCTGC	1 cut(s)	2170
Cac8I	GCNNGC	6 cut(s)	63, 1521, 1873, 2151, 2163, 2312
CfoI	GCGC	2 cut(s)	209, 380
Cfr10I	RCCGGY	2 cut(s)	65, 734
Cfr13I	GGNCC	4 cut(s)	334, 1393, 2059, 2199
Cfr42I	CCGCGG	1 cut(s)	1876
ClaI	ATCGAT	1 cut(s)	475
CsiI	ACCWGGT	1 cut(s)	932
CspCI	CAANNNNNGTGG	1 cut(s)	2503
CviAII	CATG	7 cut(s)	1129, 1471, 2008, 2311, 2315, 2341, 2459
DdeI	CTNAG	9 cut(s)	396, 480, 635, 797, 1431, 1765, 2091, 2193, 2505
DraI	TTTAAA	1 cut(s)	1030
DraIII	CACNNNGTG	1 cut(s)	2117
DrdI	GACNNNNNNGTC	2 cut(s)	2008, 2095
DseDI	GACNNNNNNGTC	2 cut(s)	2008, 2095
EaeI	YGGCCR	3 cut(s)	63, 1965, 2333
EagI	CGGCCG	1 cut(s)	2333
Eam1104I	CTCTTC	4 cut(s)	438, 1145, 1925, 2163
EarI	CTCTTC	4 cut(s)	438, 1145, 1925, 2163
EciI	GGCGGA	1 cut(s)	720
EclXI	CGGCCG	1 cut(s)	2333
Eco130I	CCWWGG	2 cut(s)	723, 1992
Eco32I	GATATC	1 cut(s)	172
Eco47I	GGWCC	2 cut(s)	1393, 2059
Eco52I	CGGCCG	1 cut(s)	2333
Eco57I	CTGAAG	3 cut(s)	1835, 2195, 2366
Eco88I	CYCGRG	1 cut(s)	244
EcoRI	GAATTC	1 cut(s)	305
EcoRII	CCWGG	4 cut(s)	932, 1138, 1659, 2187
EcoRV	GATATC	1 cut(s)	172
EcoT14I	CCWWGG	2 cut(s)	723, 1992
EcoT22I	ATGCAT	2 cut(s)	1219, 2316
ErhI	CCWWGG	2 cut(s)	723, 1992
Esp3I	CGTCTC	1 cut(s)	476
FaeI	CATG	7 cut(s)	1132, 1474, 2011, 2314, 2318, 2344, 2462
FalI	AAGNNNNNCTT	2 cut(s)	280, 312
FaqI	GGGAC	2 cut(s)	1256, 1768
FatI	CATG	7 cut(s)	1128, 1470, 2007, 2310, 2314, 2340, 2458
FauI	CCCGC	2 cut(s)	1868, 1880
FauNDI	CATATG	1 cut(s)	565
FbaI	TGATCA	2 cut(s)	781, 2230
FblI	GTMKAC	1 cut(s)	948
Fnu4HI	GCNGC	4 cut(s)	640, 1362, 1536, 2378
FokI	GGATG	9 cut(s)	2, 109, 196, 767, 791, 910, 1614, 1642, 1964
Fsp4HI	GCNGC	4 cut(s)	640, 1362, 1536, 2378
FspBI	CTAG	1 cut(s)	1190
GlaI	GCGC	2 cut(s)	208, 379
GluI	GCNGC	4 cut(s)	640, 1362, 1536, 2378
GsaI	CCCAGC	3 cut(s)	368, 555, 2270
GsuI	CTGGAG	3 cut(s)	1429, 1596, 1608
HaeII	RGCGCY	1 cut(s)	381
HaeIII	GGCC	6 cut(s)	65, 336, 1967, 2149, 2201, 2335
HapII	CCGG	9 cut(s)	66, 126, 332, 735, 745, 944, 1021, 1478, 2063
HhaI	GCGC	2 cut(s)	209, 380
Hin1II	CATG	7 cut(s)	1132, 1474, 2011, 2314, 2318, 2344, 2462
Hin6I	GCGC	2 cut(s)	207, 378
HinP1I	GCGC	2 cut(s)	207, 378
HincII	GTYRAC	2 cut(s)	1159, 1467
HindII	GTYRAC	2 cut(s)	1159, 1467
HindIII	AAGCTT	2 cut(s)	182, 216
HpaI	GTTAAC	1 cut(s)	1159
HpaII	CCGG	9 cut(s)	66, 126, 332, 735, 745, 944, 1021, 1478, 2063
HphI	GGTGA	8 cut(s)	97, 140, 922, 1476, 1766, 2047, 2194, 2281
Hpy166II	GTNNAC	9 cut(s)	279, 874, 949, 1159, 1467, 1594, 1771, 2107, 2289
Hpy188III	TCNNGA	5 cut(s)	153, 246, 1690, 1799, 2057
Hpy8I	GTNNAC	9 cut(s)	279, 874, 949, 1159, 1467, 1594, 1771, 2107, 2289
Hpy99I	CGWCG	1 cut(s)	1422
HpyAV	CCTTC	6 cut(s)	436, 1503, 1604, 1805, 1897, 2390
HpyCH4III	ACNGT	7 cut(s)	116, 256, 276, 487, 1895, 1922, 2032
HpyCH4IV	ACGT	5 cut(s)	510, 1025, 1590, 2083, 2103
HpyF10VI	GCNNNNNNNGC	6 cut(s)	215, 224, 1872, 2150, 2198, 2383
HpyF3I	CTNAG	9 cut(s)	396, 480, 635, 797, 1431, 1765, 2091, 2193, 2505
HpySE526I	ACGT	5 cut(s)	510, 1025, 1590, 2083, 2103
Hsp92II	CATG	7 cut(s)	1132, 1474, 2011, 2314, 2318, 2344, 2462
HspAI	GCGC	2 cut(s)	207, 378
KpnI	GGTACC	1 cut(s)	255
Ksp22I	TGATCA	2 cut(s)	781, 2230
KspAI	GTTAAC	1 cut(s)	1159
KspI	CCGCGG	1 cut(s)	1876
LguI	GCTCTTC	2 cut(s)	1925, 2163
LmnI	GCTCC	3 cut(s)	1064, 1571, 2359
Lsp1109I	GCAGC	4 cut(s)	651, 1348, 1522, 2389
LweI	GCATC	8 cut(s)	218, 457, 588, 672, 745, 1204, 1683, 2148
MabI	ACCWGGT	1 cut(s)	932
MaeI	CTAG	1 cut(s)	1190
MaeII	ACGT	5 cut(s)	510, 1025, 1590, 2083, 2103
MaeIII	GTNAC	6 cut(s)	128, 140, 1482, 1508, 1618, 1799
MbiI	CCGCTC	1 cut(s)	1014
MboII	GAAGA	8 cut(s)	425, 740, 797, 1162, 1231, 1942, 2180, 2491
MflI	RGATCY	2 cut(s)	528, 2262
MhlI	GDGCHC	4 cut(s)	1669, 1910, 1937, 2000
MlsI	TGGCCA	1 cut(s)	1967
MluNI	TGGCCA	1 cut(s)	1967
MlyI	GAGTC	7 cut(s)	407, 789, 944, 1004, 1490, 1626, 1661
MmeI	TCCRAC	1 cut(s)	79
Mox20I	TGGCCA	1 cut(s)	1967
Mph1103I	ATGCAT	2 cut(s)	1219, 2316
MroXI	GAANNNNTTC	1 cut(s)	2285
MscI	TGGCCA	1 cut(s)	1967
MseI	TTAA	9 cut(s)	111, 447, 534, 1029, 1158, 1677, 2252, 2478, 2511
MslI	CAYNNNNRTG	7 cut(s)	984, 1382, 1896, 1923, 2033, 2217, 2319
Msp20I	TGGCCA	1 cut(s)	1967
MspA1I	CMGCKG	1 cut(s)	1875
MspI	CCGG	9 cut(s)	66, 126, 332, 735, 745, 944, 1021, 1478, 2063
MspR9I	CCNGG	7 cut(s)	333, 934, 1140, 1478, 1661, 2063, 2189
MvaI	CCWGG	4 cut(s)	934, 1140, 1661, 2189
MvnI	CGCG	2 cut(s)	207, 1875
MwoI	GCNNNNNNNGC	6 cut(s)	215, 224, 1872, 2150, 2198, 2383
NciI	CCSGG	3 cut(s)	333, 1478, 2063
NdeI	CATATG	1 cut(s)	565
NlaIII	CATG	7 cut(s)	1132, 1474, 2011, 2314, 2318, 2344, 2462
NlaIV	GGNNCC	6 cut(s)	253, 424, 1666, 1792, 1909, 2061
NmeAIII	GCCGAG	2 cut(s)	406, 2296
NmuCI	GTSAC	5 cut(s)	128, 140, 1482, 1618, 1799
NsiI	ATGCAT	2 cut(s)	1219, 2316
NspI	RCATGY	3 cut(s)	2011, 2314, 2462
OliI	CACNNNNGTG	2 cut(s)	1896, 2033
PaeI	GCATGC	1 cut(s)	2314
PaeR7I	CTCGAG	1 cut(s)	244
PaqCI	CACCTGC	1 cut(s)	2170
PasI	CCCWGGG	1 cut(s)	1660
PciI	ACATGT	1 cut(s)	2007
PciSI	GCTCTTC	2 cut(s)	1925, 2163
PcsI	WCGNNNNNNNCGW	1 cut(s)	242
PdmI	GAANNNNTTC	1 cut(s)	2285
PfeI	GAWTC	3 cut(s)	149, 693, 2471
Pfl23II	CGTACG	1 cut(s)	256
PflFI	GACNNNGTC	2 cut(s)	134, 2082
PflMI	CCANNNNNTGG	1 cut(s)	61
PfoI	TCCNGGA	1 cut(s)	1476
PkrI	GCNGC	4 cut(s)	641, 1363, 1537, 2379
Ple19I	CGATCG	1 cut(s)	475
PleI	GAGTC	7 cut(s)	406, 789, 944, 1003, 1489, 1625, 1660
PpsI	GAGTC	7 cut(s)	406, 789, 944, 1003, 1489, 1625, 1660
PscI	ACATGT	1 cut(s)	2007
Psp1406I	AACGTT	1 cut(s)	510
Psp6I	CCWGG	4 cut(s)	932, 1138, 1659, 2187
PspFI	CCCAGC	3 cut(s)	364, 551, 2266
PspGI	CCWGG	4 cut(s)	932, 1138, 1659, 2187
PspLI	CGTACG	1 cut(s)	256
PspN4I	GGNNCC	6 cut(s)	253, 424, 1666, 1792, 1909, 2061
PspPI	GGNCC	4 cut(s)	334, 1393, 2059, 2199
PsuI	RGATCY	2 cut(s)	528, 2262
PsyI	GACNNNGTC	2 cut(s)	134, 2082
PvuI	CGATCG	1 cut(s)	475
RseI	CAYNNNNRTG	7 cut(s)	984, 1382, 1896, 1923, 2033, 2217, 2319
SacII	CCGCGG	1 cut(s)	1876
SapI	GCTCTTC	2 cut(s)	1925, 2163
SaqAI	TTAA	9 cut(s)	111, 447, 534, 1029, 1158, 1677, 2252, 2478, 2511
SatI	GCNGC	4 cut(s)	640, 1362, 1536, 2378
Sau96I	GGNCC	4 cut(s)	334, 1393, 2059, 2199
ScaI	AGTACT	1 cut(s)	2069
SchI	GAGTC	7 cut(s)	407, 789, 944, 1004, 1490, 1626, 1661
ScrFI	CCNGG	7 cut(s)	333, 934, 1140, 1478, 1661, 2063, 2189
SduI	GDGCHC	4 cut(s)	1669, 1910, 1937, 2000
SexAI	ACCWGGT	1 cut(s)	932
SfaNI	GCATC	8 cut(s)	218, 457, 588, 672, 745, 1204, 1683, 2148
SfcI	CTRYAG	2 cut(s)	192, 677
Sfr274I	CTCGAG	1 cut(s)	244
Sfr303I	CCGCGG	1 cut(s)	1876
SgrBI	CCGCGG	1 cut(s)	1876
SinI	GGWCC	2 cut(s)	1393, 2059
SlaI	CTCGAG	1 cut(s)	244
SmiMI	CAYNNNNRTG	7 cut(s)	984, 1382, 1896, 1923, 2033, 2217, 2319
SmlI	CTYRAG	1 cut(s)	244
SmoI	CTYRAG	1 cut(s)	244
SphI	GCATGC	1 cut(s)	2314
SsiI	CCGC	5 cut(s)	705, 1014, 1873, 1875, 2074
SspMI	CTAG	1 cut(s)	1190
StyD4I	CCNGG	7 cut(s)	331, 932, 1138, 1476, 1659, 2061, 2187
StyI	CCWWGG	2 cut(s)	723, 1992
TaaI	ACNGT	7 cut(s)	116, 256, 276, 487, 1895, 1922, 2032
TaiI	ACGT	5 cut(s)	513, 1028, 1593, 2086, 2106
TaqI	TCGA	6 cut(s)	154, 245, 475, 596, 1608, 1689
TaqII	GACCGA	1 cut(s)	876
TatI	WGTACW	8 cut(s)	42, 503, 788, 852, 1345, 1593, 2067, 2106
TfiI	GAWTC	3 cut(s)	149, 693, 2471
Tru1I	TTAA	9 cut(s)	111, 447, 534, 1029, 1158, 1677, 2252, 2478, 2511
Tru9I	TTAA	9 cut(s)	111, 447, 534, 1029, 1158, 1677, 2252, 2478, 2511
TscAI	CASTG	6 cut(s)	145, 805, 1900, 2160, 2393, 2419
TseFI	GTSAC	5 cut(s)	128, 140, 1482, 1618, 1799
TseI	GCWGC	4 cut(s)	639, 1361, 1535, 2377
Tsp45I	GTSAC	5 cut(s)	128, 140, 1482, 1618, 1799
TspDTI	ATGAA	7 cut(s)	17, 334, 360, 562, 914, 1238, 1552
TspGWI	ACGGA	1 cut(s)	1697
TspRI	CASTG	6 cut(s)	145, 805, 1900, 2160, 2393, 2419
Tth111I	GACNNNGTC	2 cut(s)	134, 2082
Van91I	CCANNNNNTGG	1 cut(s)	61
VpaK11BI	GGWCC	2 cut(s)	1393, 2059
XapI	RAATTY	4 cut(s)	305, 497, 833, 1032
XceI	RCATGY	3 cut(s)	2011, 2314, 2462
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1833
XhoI	CTCGAG	1 cut(s)	244
XmiI	GTMKAC	1 cut(s)	948
XmnI	GAANNNNTTC	1 cut(s)	2285
XspI	CTAG	1 cut(s)	1190
ZrmI	AGTACT	1 cut(s)	2069
Zsp2I	ATGCAT	2 cut(s)	1219, 2316

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.