RLG00000027681

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
13887829 .. 13888595
767 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000027681

Sequence Viewer

Length: 543 bp
ATGGCACGTGGGATCATTTGCACCACATCGAGAAACCACATCTTTCTTGAGAACAACGACTTCGGATTTGTATTGGTGCGGCGCAAGGTTTGCGCTACCTTCATACAGGTACCAAAGGCACCATCATTCACCGTGACGCCAGTTGTGACCATTGTGGATCATAATCGAGCTGGCCTGGCTGGATGGGCTAAAAAGTGTCATTGCGACAGGAAACTTGATCAGATTGCTGACCCAAATTTGAAGACTGAAATTGCAGTCCGATGGTTGCATAAATGTGCTTCCATTGCAATGAGTTGCATGGATGATAATGGGATCAATCGGCCGTCAATGGATGATATTGTGAGAGGGCTTCAGTTTTCTTTGCAGATGCAAGAAAATAATGAGGATTATACTGATCACATTAAAAGGACGGTTCAAAATGAGATTTCAACGATCAAAGACAATGAAGGGTCTTGTTCTAATGAGCAAAACAGTGGGGCGAAAGAATCCGTTCAAGAGTTGACCAAGACAATTTTCTCCGAGATTATTGATCCCGTTAATTAG

Protein Analysis

181

Amino Acids

20.23

Weight (kDa)

6.2

Isoelectric Point (pI)

52.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000121)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 109
AccB1I GGYRCC 2 cut(s) 109, 118
AciI CCGC 1 cut(s) 79
AclWI GGATC 4 cut(s) 20, 165, 320, 524
AcoI YGGCCR 1 cut(s) 320
AcsI RAATTY 1 cut(s) 235
AcuI CTGAAG 1 cut(s) 335
AcvI CACGTG 1 cut(s) 8
AcyI GRCGYC 1 cut(s) 137
AfaI GTAC 1 cut(s) 111
AgsI TTSAA 4 cut(s) 241, 416, 429, 494
AjnI CCWGG 1 cut(s) 174
AjuI GAANNNNNNNTTGG 2 cut(s) 497, 529
AluBI AGCT 1 cut(s) 170
AluI AGCT 1 cut(s) 170
AlwI GGATC 4 cut(s) 20, 165, 320, 524
AoxI GGCC 2 cut(s) 172, 320
ApoI RAATTY 1 cut(s) 235
ArsI GACNNNNNNTTYG 2 cut(s) 50, 82
Asp700I GAANNNNTTC 1 cut(s) 489
Asp718I GGTACC 1 cut(s) 109
AspLEI GCGC 2 cut(s) 84, 95
AsuHPI GGTGA 1 cut(s) 121
BanI GGYRCC 2 cut(s) 109, 118
BbrPI CACGTG 1 cut(s) 8
BbsI GAAGAC 1 cut(s) 248
BccI CCATC 3 cut(s) 130, 177, 255
BceAI ACGGC 1 cut(s) 307
BciT130I CCWGG 1 cut(s) 176
BclI TGATCA 2 cut(s) 217, 394
BisI GCNGC 1 cut(s) 80
BlsI GCNGC 1 cut(s) 81
Bme1390I CCNGG 1 cut(s) 176
BmiI GGNNCC 2 cut(s) 111, 120
BmrFI CCNGG 1 cut(s) 176
BmsI GCATC 1 cut(s) 357
BpiI GAAGAC 1 cut(s) 248
BpuEI CTTGAG 1 cut(s) 68
BsaAI YACGTR 1 cut(s) 8
BsaBI GATNNNNATC 1 cut(s) 162
BsaHI GRCGYC 1 cut(s) 137
Bse1I ACTGG 1 cut(s) 140
Bse3DI GCAATG 3 cut(s) 199, 282, 294
Bse8I GATNNNNATC 1 cut(s) 162
BseBI CCWGG 1 cut(s) 176
BseGI GGATG 3 cut(s) 188, 307, 337
BseJI GATNNNNATC 1 cut(s) 162
BseMI GCAATG 3 cut(s) 199, 282, 294
BseNI ACTGG 1 cut(s) 140
BseX3I CGGCCG 1 cut(s) 320
Bsh1285I CGRYCG 1 cut(s) 323
BshFI GGCC 2 cut(s) 174, 322
BshNI GGYRCC 2 cut(s) 109, 118
BsiEI CGRYCG 1 cut(s) 323
BsnI GGCC 2 cut(s) 174, 322
Bsp143I GATC 7 cut(s) 12, 157, 217, 312, 394, 432, 529
BspACI CCGC 1 cut(s) 79
BspANI GGCC 2 cut(s) 174, 322
BspLI GGNNCC 2 cut(s) 111, 120
BspPI GGATC 4 cut(s) 20, 165, 320, 524
BspT107I GGYRCC 2 cut(s) 109, 118
BsrDI GCAATG 3 cut(s) 199, 282, 294
BsrI ACTGG 1 cut(s) 140
BssMI GATC 7 cut(s) 12, 157, 217, 312, 394, 432, 529
BssNI GRCGYC 1 cut(s) 137
Bst2UI CCWGG 1 cut(s) 176
Bst4CI ACNGT 3 cut(s) 133, 412, 473
BstACI GRCGYC 1 cut(s) 137
BstAPI GCANNNNNTGC 1 cut(s) 90
BstBAI YACGTR 1 cut(s) 8
BstC8I GCNNGC 1 cut(s) 172
BstF5I GGATG 3 cut(s) 188, 307, 337
BstHHI GCGC 2 cut(s) 84, 95
BstKTI GATC 7 cut(s) 15, 160, 220, 315, 397, 435, 532
BstMBI GATC 7 cut(s) 12, 157, 217, 312, 394, 432, 529
BstMCI CGRYCG 1 cut(s) 323
BstMWI GCNNNNNNNGC 4 cut(s) 90, 176, 185, 284
BstNI CCWGG 1 cut(s) 176
BstSCI CCNGG 1 cut(s) 174
BstV2I GAAGAC 1 cut(s) 248
BstZI CGGCCG 1 cut(s) 320
BsuRI GGCC 2 cut(s) 174, 322
BtsCI GGATG 3 cut(s) 188, 307, 337
BtsIMutI CAGTG 1 cut(s) 478
Cac8I GCNNGC 1 cut(s) 172
CfoI GCGC 2 cut(s) 84, 95
CseI GACGC 1 cut(s) 145
Csp6I GTAC 1 cut(s) 110
CviAII CATG 1 cut(s) 298
CviJI RGCY 6 cut(s) 170, 174, 179, 188, 322, 349
CviKI_1 RGCY 6 cut(s) 170, 174, 179, 188, 322, 349
CviQI GTAC 1 cut(s) 110
DpnI GATC 7 cut(s) 14, 159, 219, 314, 396, 434, 531
DpnII GATC 7 cut(s) 12, 157, 217, 312, 394, 432, 529
EaeI YGGCCR 1 cut(s) 320
EagI CGGCCG 1 cut(s) 320
EclXI CGGCCG 1 cut(s) 320
Eco52I CGGCCG 1 cut(s) 320
Eco57I CTGAAG 1 cut(s) 335
Eco72I CACGTG 1 cut(s) 8
EcoRII CCWGG 1 cut(s) 174
FaeI CATG 1 cut(s) 301
FaiI YATR 5 cut(s) 104, 162, 270, 299, 390
FatI CATG 1 cut(s) 297
FbaI TGATCA 2 cut(s) 217, 394
Fnu4HI GCNGC 1 cut(s) 80
FokI GGATG 3 cut(s) 195, 314, 344
Fsp4HI GCNGC 1 cut(s) 80
GlaI GCGC 2 cut(s) 83, 94
GluI GCNGC 1 cut(s) 80
HaeIII GGCC 2 cut(s) 174, 322
HgaI GACGC 1 cut(s) 145
HhaI GCGC 2 cut(s) 84, 95
Hin1I GRCGYC 1 cut(s) 137
Hin1II CATG 1 cut(s) 301
Hin6I GCGC 2 cut(s) 82, 93
HinP1I GCGC 2 cut(s) 82, 93
HincII GTYRAC 1 cut(s) 501
HindII GTYRAC 1 cut(s) 501
HinfI GANTC 1 cut(s) 485
HphI GGTGA 1 cut(s) 121
Hpy166II GTNNAC 1 cut(s) 501
Hpy188I TCNGA 4 cut(s) 65, 222, 260, 520
Hpy188III TCNNGA 3 cut(s) 30, 47, 494
Hpy8I GTNNAC 1 cut(s) 501
HpyAV CCTTC 2 cut(s) 109, 440
HpyCH4III ACNGT 3 cut(s) 133, 412, 473
HpyCH4IV ACGT 1 cut(s) 7
HpyCH4V TGCA 7 cut(s) 21, 254, 268, 287, 297, 364, 370
HpyF10VI GCNNNNNNNGC 4 cut(s) 90, 176, 185, 284
HpySE526I ACGT 1 cut(s) 7
Hsp92I GRCGYC 1 cut(s) 137
Hsp92II CATG 1 cut(s) 301
HspAI GCGC 2 cut(s) 82, 93
KpnI GGTACC 1 cut(s) 113
Ksp22I TGATCA 2 cut(s) 217, 394
Kzo9I GATC 7 cut(s) 12, 157, 217, 312, 394, 432, 529
LpnPI CCDG 7 cut(s) 92, 153, 156, 161, 165, 188, 193
LweI GCATC 1 cut(s) 357
MaeII ACGT 1 cut(s) 7
MaeIII GTNAC 2 cut(s) 133, 145
MalI GATC 7 cut(s) 14, 159, 219, 314, 396, 434, 531
MboI GATC 7 cut(s) 12, 157, 217, 312, 394, 432, 529
MboII GAAGA 1 cut(s) 253
MluCI AATT 4 cut(s) 235, 249, 510, 538
MnlI CCTC 2 cut(s) 338, 376
MroXI GAANNNNTTC 1 cut(s) 489
MseI TTAA 2 cut(s) 402, 537
MslI CAYNNNNRTG 2 cut(s) 273, 287
MspR9I CCNGG 1 cut(s) 176
MvaI CCWGG 1 cut(s) 176
MwoI GCNNNNNNNGC 4 cut(s) 90, 176, 185, 284
NdeII GATC 7 cut(s) 12, 157, 217, 312, 394, 432, 529
NlaIII CATG 1 cut(s) 301
NlaIV GGNNCC 2 cut(s) 111, 120
NmuCI GTSAC 2 cut(s) 133, 145
PdmI GAANNNNTTC 1 cut(s) 489
PfeI GAWTC 1 cut(s) 485
PkrI GCNGC 1 cut(s) 81
PmaCI CACGTG 1 cut(s) 8
PmlI CACGTG 1 cut(s) 8
Ppu21I YACGTR 1 cut(s) 8
Psp6I CCWGG 1 cut(s) 174
PspCI CACGTG 1 cut(s) 8
PspGI CCWGG 1 cut(s) 174
PspN4I GGNNCC 2 cut(s) 111, 120
RsaI GTAC 1 cut(s) 111
RsaNI GTAC 1 cut(s) 110
RseI CAYNNNNRTG 2 cut(s) 273, 287
SaqAI TTAA 2 cut(s) 402, 537
SatI GCNGC 1 cut(s) 80
Sau3AI GATC 7 cut(s) 12, 157, 217, 312, 394, 432, 529
ScrFI CCNGG 1 cut(s) 176
SetI ASST 5 cut(s) 10, 90, 101, 111, 172
SfaNI GCATC 1 cut(s) 357
SmiMI CAYNNNNRTG 2 cut(s) 273, 287
SmlI CTYRAG 1 cut(s) 47
SmoI CTYRAG 1 cut(s) 47
Sse9I AATT 4 cut(s) 235, 249, 510, 538
SsiI CCGC 1 cut(s) 79
StyD4I CCNGG 1 cut(s) 174
TaaI ACNGT 3 cut(s) 133, 412, 473
TaiI ACGT 1 cut(s) 10
TaqI TCGA 2 cut(s) 29, 166
TasI AATT 4 cut(s) 235, 249, 510, 538
TauI GCSGC 1 cut(s) 82
TfiI GAWTC 1 cut(s) 485
Tru1I TTAA 2 cut(s) 402, 537
Tru9I TTAA 2 cut(s) 402, 537
TscAI CASTG 1 cut(s) 478
TseFI GTSAC 2 cut(s) 133, 145
Tsp45I GTSAC 2 cut(s) 133, 145
TspDTI ATGAA 2 cut(s) 91, 459
TspGWI ACGGA 1 cut(s) 478
TspRI CASTG 1 cut(s) 478
XapI RAATTY 1 cut(s) 235
XmnI GAANNNNTTC 1 cut(s) 489
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.