Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000121

Physical Location & Seq

Genomic Coordinates Forward (+)

75882567 .. 75885800

Gene Structure 3234 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G048310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2685 bp

ATGATACCTATTGTCATTCCTCTTAACCTTTCCAGCTTGTTTTTACTCATCGTCACCCTGCTGGTGGCCGGAAAGTCCACACCTATCTACTCTCCAACCTATAATATCACCCTTAACTGTGGCTTTTCCGGCGACACGGTCAGTACTTATGATTTTCAAACTTGGACGGGAGATATCAACTCAAAGTTTTTCTCCGCAGCAGTTGGTAGCGCATCTAAAGTCGAGAAAGCACCACCGTCGTCCTCCACGGGAAGCCAAGTGCCATTCACCACAGCTCGGCTTTCGTATTCGGAATTCACTTACAGATTTCCCGTAAGTCCAGGCCAGAAGTTCATCCGCTTGTATTTCTTCCCAGCTACGTACAACGCGGACTTCGACCGCTCGAAATCACTTTTCTCTGTCAAAGCCGGTGGCTACAGACTTCTCAAGGACTTCAACGCTTCTCTCAGTAGTACAGTCTACGATGGCTATGAGACTATATTCAGGGAATTCTGCGTCAACTTTGAGCCAGATCAGCGGAGTCTGAACATCACATTCACTCCCAGCAAGGGGGGATACGCGTTTATCAACGGGATCGAAATCATGTCCATGCCCACCAATCTTTACCACTTAGCAGCTCAAGGCTATGGGGCTAAATATCTCGGCGCCAGCGATAGCAGATTTTACGTTGAAAACAACACCGCTCTGGAGATGATCTACCGAATCAACGTTGGTGGCAAGGCAGTACCTCCGAATGAAGACACCGGCATGTACCGCACCTGGAATCCAACCGACGAGTTCTACTTAGATGATGTAAGTGAAAAGTGGAGCATTGCACGACCAAGATATAATACTCCACTCAATTTTGCAAAAATCCCTAACTACACTGCGCCCGAAGAGGTGTACCGAACGGCCCGGACAATGAGAGGGAACATCACCATCAACAAGAGCTACAATCTCACCTGGGGATTCCCTGTAGATCCAGACTTTTCTTATCTGGTGAGGCTCCATTTCTGTGAGATTGATCCGAATATTACCAAGGCTGAAGGTAGAATGTTTCAGATTTTCATAGCTAATTTAACAGCTGAACCGCATGCGGACATAATCGGATGGACTGCAGAAAATGGAAAAGGAAATGGGATTCCCATATATAGGGACTACTTTGTGTCGATGCAGAATCTTGGAACCCAGAAGAAAGGTTTCGTTAATCTCTCTGTTGCACTACAAGCAAATCAAGACGATTACGATACTCAATATTTCGATGTGATCTTGAATGGGCTGGAAATCTTCAAACTCAATGACACAGACGGCAATCTCGGCGGACCCATCCCCGAGCTATCGAATATCCCGCCAACGGTGACGTCGGAAAGCTCTAGAAACTCAAAGAAGAAGTCGACTCCTATGCTTGCTATCCTCGCCGGTGTTGCTTCGGCCTTACTTGTTCTTTCCATCGTCGGGGTTTTACTTTTCAGGCGTGGAAGAAAAGTCAAGGACTCCAACTCCAGCAAAGCAACAAAGTGGGGGCCATATTCATTTTCGACGACCAAGTCAACCAAGTCACTCGGCTCATCTCTACCGTCGGACCTGTGTCGTCACTTTTCACTGGCTGAGATCAAAGCCGCCACCCAAAACTTCAACGATGTTTTCATCATCGGGGTTGGTGGGTTTGGTAACGTGTACAAAGGGTATGTGGATGACGGGTCCACACCGGTGGCGATCAAACGGCTGAAACCCGAGTCATCTCAGGGCGCCCGCGAGTTCAAGACCGAGATAGAGATGCTCTCCCAACTCCGCCACCTCCATTTGGTGTCCCTCGTTGGATATTGCACCGAGCAAGGTGAGATGATCTTGGTGTATGACTACATGGCACGTGGGACTCTGCGAGACCATTTGTACAAAACTGAAAATCCACCACTTCCGTGGGAACAACGGCTCCAAATTTGTATTGGTGCGGCGCGTGGGTTGCACTACCTTCACACGGGGGCCAAGCGCATGATTATCCACCGCGACGTGAAGAGCACAAATATCTTATTGGATGAGAAATGGGTGGCCAAGGTTTCGGACTTTGGGTTGTCCAAAATGGGCACCACCACTTTGTCCAAGACTCACATCAGTACAGTGGTGAAGGGTAGTTTTGGGTATCTCGACCCGGAGTACTATAGACGTCAACAGTTGACTGAGAAATCGGACGTTTACTCTTTTGGAGTAGTCTTGTGTGAGGTTTTGTGTGCAAGGCCAGCTCTGATACGTACGGCGGAGAAGAAGCAAATGAGCCTAGCTGAATGGACCAAGACTAGTCATCGAAATGGCACGATTAATCAAATCATTGATCCAAATCTAAGGGGAAAGATTGCAGCCACTTGTCTGAATAAGTTCGTTGAGCTTGCGTTGAGTTGTATGAATGATAATGGAAGTGAGCGGCCATCGATGAATGACGTAGTATGGGGGCTTGAGTTTGCACTGCAGCTTCAGCAGAGTGCGGAAGCCATGTTATACTCCAACGTCGAAAAGGAAGGTGAAGATGAGGTTGCATTCATGAAAGGTAATGATGCTGGGATGAGTTGTAGCTGGGAATACTCGTCGGATTCGAAGAACAGCAGAACGACCAAAACTAGTAGCGATGAGCAAATGTCTACCTCCAATGAATCCATGAAAGGCATGTCTGGAACAATCTTCTCTGAGATCAAGGATCCCACTGTGAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001558 GO:0003674 GO:0003824 GO:0004672 GO:0005575 GO:0005618 GO:0005623 GO:0005886 GO:0005911 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0007275 GO:0008150 GO:0008152 GO:0009506 GO:0009605 GO:0009607 GO:0009620 GO:0009719 GO:0009723 GO:0009725 GO:0009741 GO:0009787 GO:0009788 GO:0009791 GO:0009856 GO:0009966 GO:0009968 GO:0009987 GO:0010033 GO:0010118 GO:0010483 GO:0010646 GO:0010648 GO:0014070 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0022414 GO:0022622 GO:0023051 GO:0023057 GO:0030054 GO:0030308 GO:0030312 GO:0032501 GO:0032502 GO:0033993 GO:0036211 GO:0040008 GO:0042221 GO:0043170 GO:0043207 GO:0043412 GO:0043680 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044426 GO:0044462 GO:0044464 GO:0044703 GO:0044706 GO:0045926 GO:0046777 GO:0048364 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051128 GO:0051703 GO:0051704 GO:0051707 GO:0055044 GO:0065007 GO:0071704 GO:0071944 GO:0098542 GO:0099402 GO:0140096 GO:1901419 GO:1901420 GO:1901564 GO:1901700 GO:1905957 GO:1905958

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Malectin_like Pkinase_Tyr

Protein Analysis

894

Amino Acids

99.64

Weight (kDa)

8.06

Isoelectric Point (pI)

34.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Malectin_like	PF12819	38 - 424	4.2e-29	Malectin-like domain
Pkinase	PF00069	542 - 806	1.5e-43	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	544 - 807	1.2e-49	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000121)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g46570 FvH4_6g46580 FvH4_6g46610 FvH4_6g46620 FvH4_6g46640 FvH4_6g46680
malus_domestica	MD03G1063600.v1.1 MD03G1063700.v1.1 MD09G1069300.v1.1 MD09G1069400.v1.1 MD11G1067200.v1.1 MD11G1070300.v1.1 MD11G1153300.v1.1 MD17G1060300.v1.1 MD17G1061900.v1.1 MD17G1062100.v1.1 MD17G1062300.v1.1 MD17G1062400.v1.1 MD17G1063000.v1.1 MD17G1063200.v1.1 MD17G1063600.v1.1
prunus_persica	Prupe.3G246200_v2.0.a1 Prupe.3G251000_v2.0.a1 Prupe.3G251100_v2.0.a1 Prupe.3G251200_v2.0.a1 Prupe.3G251600_v2.0.a1 Prupe.3G251700_v2.0.a1 Prupe.3G251800_v2.0.a1 Prupe.3G251900_v2.0.a1
pyrus_communis	pycom03g05070 pycom03g05100 pycom12433g00070 pycom17g06000 pycom17g06170 pycom17g06180 pycom17g06200 pycom17g06210 pycom17g06280 pycom17g06300 pycom17g06310 pycom17g06320 pycom17g06330 pycom17g06350 pycom17g06370 pycom17g06380 pycom17g06400
rosa_chinensis	RchiOBHm_Chr1g0321851 RchiOBHm_Chr1g0321911 RchiOBHm_Chr1g0323951 RchiOBHm_Chr1g0361941 RchiOBHm_Chr2g0164711 RchiOBHm_Chr2g0165301 RchiOBHm_Chr2g0165311 RchiOBHm_Chr2g0165321 RchiOBHm_Chr2g0165351 RchiOBHm_Chr2g0165431 RchiOBHm_Chr2g0165461 RchiOBHm_Chr2g0165491 RchiOBHm_Chr2g0165511 RchiOBHm_Chr2g0165521 RchiOBHm_Chr2g0165531 RchiOBHm_Chr3g0481631 RchiOBHm_Chr3g0481801 RchiOBHm_Chr3g0481811 RchiOBHm_Chr3g0481821 RchiOBHm_Chr3g0481831 RchiOBHm_Chr4g0400291 RchiOBHm_Chr4g0400371 RchiOBHm_Chr4g0400391 RchiOBHm_Chr6g0274711 RchiOBHm_Chr6g0274721 RchiOBHm_Chr7g0211011
rosa_laevigata	RLG00000002260 RLG00000002262 RLG00000002263 RLG00000003027 RLG00000003028 RLG00000009196 RLG00000009197 RLG00000012573 RLG00000020400 RLG00000021523 RLG00000021524 RLG00000021525 RLG00000021527 RLG00000021528 RLG00000021529 RLG00000021530 RLG00000021532 RLG00000021533 RLG00000021534 RLG00000021535 RLG00000021537 RLG00000023384 RLG00000027681 RLG00000027682 RLG00000027685 RLG00000030240 RLG00000030401
rosa_multiflora	Rmu_co7998078.1_g000001 Rmu_co8009032.1_g000001 Rmu_co8326071.1_g000001 Rmu_co8333709.1_g000001 Rmu_co8362007.1_g000001 Rmu_co8369261.1_g000001 Rmu_co8391219.1_g000001 Rmu_co8456951.1_g000001 Rmu_co8461523.1_g000001 Rmu_sc0000427.1_g000009 Rmu_sc0000427.1_g000032 Rmu_sc0000427.1_g000033 Rmu_sc0000521.1_g000005 Rmu_sc0000521.1_g000008 Rmu_sc0000521.1_g000009 Rmu_sc0000655.1_g000016 Rmu_sc0000655.1_g000017 Rmu_sc0000655.1_g000018 Rmu_sc0000675.1_g000003 Rmu_sc0000795.1_g000018 Rmu_sc0000795.1_g000083 Rmu_sc0001306.1_g000042 Rmu_sc0001306.1_g000043 Rmu_sc0001873.1_g000001 Rmu_sc0001873.1_g000010 Rmu_sc0002529.1_g000002 Rmu_sc0002529.1_g000004 Rmu_sc0003410.1_g000004 Rmu_sc0003909.1_g000010 Rmu_sc0004097.1_g000001 Rmu_sc0005425.1_g000003 Rmu_sc0005425.1_g000004 Rmu_sc0005425.1_g000010 Rmu_sc0005425.1_g000012 Rmu_sc0005425.1_g000017 Rmu_sc0006223.1_g000014 Rmu_sc0006399.1_g000007 Rmu_sc0010324.1_g000001 Rmu_sc0010409.1_g000005 Rmu_sc0013532.1_g000005 Rmu_sc0016601.1_g000002 Rmu_sc0016601.1_g000003 Rmu_sc0016601.1_g000006 Rmu_sc0017773.1_g000001 Rmu_sc0017773.1_g000002 Rmu_sc0019514.1_g000002 Rmu_sc0021575.1_g000001 Rmu_sc0023720.1_g000002 Rmu_sc0030898.1_g000001 Rmu_sc0033982.1_g000001 Rmu_sc0034651.1_g000001 Rmu_sc0038482.1_g000001 Rmu_sc0038644.1_g000001 Rmu_sc0038644.1_g000003 Rmu_sc0039243.1_g000001 Rmu_sc0042715.1_g000001 Rmu_ssc0000124.1_g000003
rosa_roxburghii	Rroxscaffold_2G00085740 Rroxscaffold_2G00085760 Rroxscaffold_2G00085780 Rroxscaffold_2G00085800 Rroxscaffold_2G00085830 Rroxscaffold_2G00085850 Rroxscaffold_2G00085860 Rroxscaffold_4G00294610 Rroxscaffold_4G00326070 Rroxscaffold_4G00326080 Rroxscaffold_4G00327420 Rroxscaffold_4G00327430 Rroxscaffold_4G00327460 Rroxscaffold_4G00327470 Rroxscaffold_5G00345350 Rroxscaffold_6G00399890 Rroxscaffold_6G00400250 Rroxscaffold_7G00194000 Rroxscaffold_7G00194020 Rroxscaffold_7G00194050
rosa_rugosa	Rorug01G0034300 Rorug01G0034500 Rorug01G0040700 Rorug01G0064300 Rorug02G0513700 Rorug02G0513800 Rorug02G0513900 Rorug02G0514000 Rorug02G0514000 Rorug02G0514100 Rorug02G0514300 Rorug02G0514400 Rorug02G0514700 Rorug02G0515000 Rorug02G0515100 Rorug02G0515300 Rorug02G0515500 Rorug02G0515600 Rorug02G0515800 Rorug02G0515900 Rorug02G0516000 Rorug03G0193200 Rorug04G0024600 Rorug06G0083100 Rorug06G0085200 Rorug07G0188600
rosa_samantha	Rh1CG234000 Rh2DG603700 Rh2DG603800 Rh2DG603900 Rh6BG203000
rosa_wichuraiana	Rw0G010290 Rw1G004240 Rw1G005000 Rw1G026960 Rw2G048310 Rw2G048320 Rw2G048330 Rw2G048350 Rw2G048360 Rw2G048380 Rw2G048430 Rw2G048460 Rw2G048500 Rw2G048510 Rw2G048520 Rw2G048530 Rw3G021810 Rw4G008270 Rw6G017320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1525
AatII	GACGTC	2 cut(s)	1343, 2146
AccB1I	GGYRCC	3 cut(s)	644, 1727, 2063
AccBSI	CCGCTC	3 cut(s)	381, 683, 2398
AccI	GTMKAC	3 cut(s)	459, 1373, 2612
AccII	CGCG	5 cut(s)	368, 560, 1734, 1936, 1986
AclI	AACGTT	1 cut(s)	708
AclWI	GGATC	6 cut(s)	581, 953, 998, 2303, 2663, 2676
AcoI	YGGCCR	3 cut(s)	66, 2028, 2399
AcsI	RAATTY	3 cut(s)	293, 488, 1917
AcuI	CTGAAG	2 cut(s)	1044, 2432
AcvI	CACGTG	1 cut(s)	1850
AcyI	GRCGYC	4 cut(s)	645, 1340, 1728, 2143
AfiI	CCNNNNNNNGG	9 cut(s)	64, 276, 548, 549, 1131, 1333, 1434, 1783, 1957
AflIII	ACRYGT	2 cut(s)	558, 1653
AgeI	ACCGGT	1 cut(s)	1687
AgsI	TTSAA	7 cut(s)	158, 436, 671, 1252, 1270, 1615, 1741
AhlI	ACTAGT	2 cut(s)	2273, 2591
AjiI	CACGTC	1 cut(s)	1990
AjnI	CCWGG	3 cut(s)	319, 758, 941
AleI	CACNNNNGTG	2 cut(s)	1688, 1897
AloI	GAACNNNNNNTCC	2 cut(s)	1896, 1928
Alw21I	GWGCWC	1 cut(s)	2000
Alw26I	GTCTC	2 cut(s)	467, 1857
AlwI	GGATC	6 cut(s)	581, 953, 998, 2303, 2663, 2676
Ama87I	CYCGRG	2 cut(s)	1310, 1712
AoxI	GGCC	9 cut(s)	66, 322, 891, 1410, 1502, 1962, 2028, 2213, 2399
ApeKI	GCWGC	4 cut(s)	197, 614, 2333, 2443
ApoI	RAATTY	3 cut(s)	293, 488, 1917
ArsI	GACNNNNNNTTYG	2 cut(s)	1355, 1387
AseI	ATTAAT	1 cut(s)	2295
AsiGI	ACCGGT	1 cut(s)	1687
Asp700I	GAANNNNTTC	2 cut(s)	1178, 2351
AspLEI	GCGC	6 cut(s)	212, 647, 871, 1730, 1936, 1971
AspS9I	GGNCC	7 cut(s)	892, 1301, 1502, 1561, 1680, 1962, 2265
AsuC2I	CCSGG	2 cut(s)	895, 2129
AsuII	TTCGAA	1 cut(s)	2567
AvaI	CYCGRG	2 cut(s)	1310, 1712
AvaII	GGWCC	4 cut(s)	1301, 1561, 1680, 2265
BaeGI	GKGCMC	1 cut(s)	2066
BalI	TGGCCA	1 cut(s)	2030
BamHI	GGATCC	1 cut(s)	2668
BanI	GGYRCC	3 cut(s)	644, 1727, 2063
BbrPI	CACGTG	1 cut(s)	1850
BbsI	GAAGAC	1 cut(s)	744
Bbv12I	GWGCWC	1 cut(s)	2000
BbvI	GCAGC	4 cut(s)	209, 626, 2345, 2455
BccI	CCATC	6 cut(s)	458, 926, 1083, 1313, 1436, 2410
BceAI	ACGGC	5 cut(s)	906, 1303, 1718, 1925, 2247
BcgI	CGANNNNNNTGC	4 cut(s)	219, 253, 1363, 1397
BciT130I	CCWGG	3 cut(s)	321, 760, 943
BciVI	GTATCC	1 cut(s)	548
BcnI	CCSGG	2 cut(s)	895, 2129
BcoDI	GTCTC	2 cut(s)	467, 1857
BcuI	ACTAGT	2 cut(s)	2273, 2591
BfaI	CTAG	4 cut(s)	1353, 2255, 2274, 2592
BfmI	CTRYAG	5 cut(s)	415, 954, 1095, 2137, 2441
BfoI	RGCGCY	2 cut(s)	648, 1731
BfuI	GTATCC	1 cut(s)	548
BisI	GCNGC	7 cut(s)	198, 615, 1599, 1932, 2334, 2399, 2444
BlsI	GCNGC	7 cut(s)	199, 616, 1600, 1933, 2335, 2400, 2445
BmcAI	AGTACT	2 cut(s)	145, 2135
Bme1390I	CCNGG	5 cut(s)	321, 760, 895, 943, 2129
Bme18I	GGWCC	4 cut(s)	1301, 1561, 1680, 2265
BmeT110I	CYCGRG	2 cut(s)	1310, 1712
BmgBI	CACGTC	1 cut(s)	1990
BmgT120I	GGNCC	7 cut(s)	892, 1301, 1502, 1561, 1680, 1962, 2265
BmrFI	CCNGG	5 cut(s)	321, 760, 895, 943, 2129
BmsI	GCATC	4 cut(s)	221, 1140, 1746, 2518
BoxI	GACNNNNGTC	1 cut(s)	1566
BpiI	GAAGAC	1 cut(s)	744
BplI	GAGNNNNNCTC	2 cut(s)	1745, 1777
BpmI	CTGGAG	2 cut(s)	707, 1465
Bpu14I	TTCGAA	1 cut(s)	2567
BpuEI	CTTGAG	3 cut(s)	410, 603, 2450
BpuMI	CCSGG	2 cut(s)	895, 2129
Bsa29I	ATCGAT	1 cut(s)	2405
BsaAI	YACGTR	3 cut(s)	360, 1850, 2228
BsaBI	GATNNNNATC	2 cut(s)	578, 2313
BsaHI	GRCGYC	4 cut(s)	645, 1340, 1728, 2143
BsaI	GGTCTC	1 cut(s)	1857
BsaJI	CCNNGG	5 cut(s)	246, 942, 1017, 1898, 2031
BsaWI	WCCGGW	1 cut(s)	1687
BsaXI	ACNNNNNCTCC	6 cut(s)	523, 553, 1463, 1493, 1896, 1926
Bsc4I	CCNNNNNNNGG	9 cut(s)	64, 276, 548, 549, 1131, 1333, 1434, 1783, 1957
Bse118I	RCCGGY	4 cut(s)	407, 743, 1397, 1687
Bse1I	ACTGG	1 cut(s)	1587
Bse3DI	GCAATG	1 cut(s)	810
Bse8I	GATNNNNATC	2 cut(s)	578, 2313
BseBI	CCWGG	3 cut(s)	321, 760, 943
BseCI	ATCGAT	1 cut(s)	2405
BseDI	CCNNGG	5 cut(s)	246, 942, 1017, 1898, 2031
BseGI	GGATG	6 cut(s)	333, 1094, 1305, 1678, 2020, 2541
BseJI	GATNNNNATC	2 cut(s)	578, 2313
BseLI	CCNNNNNNNGG	9 cut(s)	64, 276, 548, 549, 1131, 1333, 1434, 1783, 1957
BseMI	GCAATG	1 cut(s)	810
BseMII	CTCAG	5 cut(s)	460, 1578, 1736, 2148, 2649
BseNI	ACTGG	1 cut(s)	1587
BseSI	GKGCMC	1 cut(s)	2066
BseXI	GCAGC	4 cut(s)	209, 626, 2345, 2455
BseYI	CCCAGC	4 cut(s)	352, 542, 2531, 2547
Bsh1236I	CGCG	5 cut(s)	368, 560, 1734, 1936, 1986
Bsh1285I	CGRYCG	1 cut(s)	379
BshFI	GGCC	9 cut(s)	68, 324, 893, 1412, 1504, 1964, 2030, 2215, 2401
BshNI	GGYRCC	3 cut(s)	644, 1727, 2063
BshTI	ACCGGT	1 cut(s)	1687
BshVI	ATCGAT	1 cut(s)	2405
BsiEI	CGRYCG	1 cut(s)	379
BsiHKAI	GWGCWC	1 cut(s)	2000
BsiHKCI	CYCGRG	2 cut(s)	1310, 1712
BsiSI	CCGG	8 cut(s)	69, 129, 408, 744, 895, 1398, 1688, 2129
BsiWI	CGTACG	1 cut(s)	2228
BslFI	GGGAC	3 cut(s)	1148, 1774, 1867
BslI	CCNNNNNNNGG	9 cut(s)	64, 276, 548, 549, 1131, 1333, 1434, 1783, 1957
BsmAI	GTCTC	2 cut(s)	467, 1857
BsmFI	GGGAC	3 cut(s)	1148, 1774, 1867
BsmI	GAATGC	1 cut(s)	2510
BsnI	GGCC	9 cut(s)	68, 324, 893, 1412, 1504, 1964, 2030, 2215, 2401
Bso31I	GGTCTC	1 cut(s)	1857
BsoBI	CYCGRG	2 cut(s)	1310, 1712
Bsp119I	TTCGAA	1 cut(s)	2567
Bsp1286I	GDGCHC	2 cut(s)	2000, 2066
Bsp1407I	TGTACA	2 cut(s)	1656, 1872
BspANI	GGCC	9 cut(s)	68, 324, 893, 1412, 1504, 1964, 2030, 2215, 2401
BspCNI	CTCAG	5 cut(s)	459, 1579, 1735, 2149, 2650
BspDI	ATCGAT	1 cut(s)	2405
BspFNI	CGCG	5 cut(s)	368, 560, 1734, 1936, 1986
BspHI	TCATGA	1 cut(s)	2514
BspMAI	CTGCAG	2 cut(s)	1099, 2445
BspPI	GGATC	6 cut(s)	581, 953, 998, 2303, 2663, 2676
BspQI	GCTCTTC	1 cut(s)	1988
BspT104I	TTCGAA	1 cut(s)	2567
BspT107I	GGYRCC	3 cut(s)	644, 1727, 2063
BspTNI	GGTCTC	1 cut(s)	1857
BsrBI	CCGCTC	3 cut(s)	381, 683, 2398
BsrDI	GCAATG	1 cut(s)	810
BsrFI	RCCGGY	4 cut(s)	407, 743, 1397, 1687
BsrGI	TGTACA	2 cut(s)	1656, 1872
BsrI	ACTGG	1 cut(s)	1587
BssAI	RCCGGY	4 cut(s)	407, 743, 1397, 1687
BssECI	CCNNGG	5 cut(s)	246, 942, 1017, 1898, 2031
BssNI	GRCGYC	4 cut(s)	645, 1340, 1728, 2143
BssT1I	CCWWGG	2 cut(s)	1017, 2031
Bst2UI	CCWGG	3 cut(s)	321, 760, 943
Bst4CI	ACNGT	9 cut(s)	119, 139, 237, 457, 1336, 1557, 2098, 2151, 2677
Bst6I	CTCTTC	2 cut(s)	870, 1988
BstACI	GRCGYC	4 cut(s)	645, 1340, 1728, 2143
BstAUI	TGTACA	2 cut(s)	1656, 1872
BstBAI	YACGTR	3 cut(s)	360, 1850, 2228
BstBI	TTCGAA	1 cut(s)	2567
BstC8I	GCNNGC	6 cut(s)	649, 1074, 1386, 1732, 2217, 2364
BstDEI	CTNAG	8 cut(s)	446, 610, 784, 1587, 1722, 2157, 2318, 2658
BstDSI	CCRYGG	2 cut(s)	246, 1898
BstF5I	GGATG	6 cut(s)	333, 1094, 1305, 1678, 2020, 2541
BstFNI	CGCG	5 cut(s)	368, 560, 1734, 1936, 1986
BstH2I	RGCGCY	2 cut(s)	648, 1731
BstHHI	GCGC	6 cut(s)	212, 647, 871, 1730, 1936, 1971
BstMAI	GTCTC	2 cut(s)	467, 1857
BstMCI	CGRYCG	1 cut(s)	379
BstNI	CCWGG	3 cut(s)	321, 760, 943
BstNSI	RCATGY	3 cut(s)	751, 1076, 2641
BstPAI	GACNNNNGTC	1 cut(s)	1566
BstSCI	CCNGG	5 cut(s)	319, 758, 893, 941, 2127
BstSFI	CTRYAG	5 cut(s)	415, 954, 1095, 2137, 2441
BstSLI	GKGCMC	1 cut(s)	2066
BstSNI	TACGTA	2 cut(s)	360, 2228
BstUI	CGCG	5 cut(s)	368, 560, 1734, 1936, 1986
BstV1I	GCAGC	4 cut(s)	209, 626, 2345, 2455
BstV2I	GAAGAC	1 cut(s)	744
BstX2I	RGATCY	2 cut(s)	958, 2668
BstXI	CCANNNNNNTGG	2 cut(s)	1690, 1899
BstYI	RGATCY	2 cut(s)	958, 2668
Bsu15I	ATCGAT	1 cut(s)	2405
BsuI	GTATCC	1 cut(s)	548
BsuRI	GGCC	9 cut(s)	68, 324, 893, 1412, 1504, 1964, 2030, 2215, 2401
BsuTUI	ATCGAT	1 cut(s)	2405
BtgI	CCRYGG	2 cut(s)	246, 1898
BtgZI	GCGATG	1 cut(s)	2613
BtrI	CACGTC	1 cut(s)	1990
BtsCI	GGATG	6 cut(s)	333, 1094, 1305, 1678, 2020, 2541
BtsI	GCAGTG	2 cut(s)	864, 2438
BtsIMutI	CAGTG	5 cut(s)	864, 1580, 2103, 2438, 2673
Cac8I	GCNNGC	6 cut(s)	649, 1074, 1386, 1732, 2217, 2364
CciI	TCATGA	1 cut(s)	2514
CfoI	GCGC	6 cut(s)	212, 647, 871, 1730, 1936, 1971
Cfr10I	RCCGGY	4 cut(s)	407, 743, 1397, 1687
Cfr13I	GGNCC	7 cut(s)	892, 1301, 1502, 1561, 1680, 1962, 2265
ClaI	ATCGAT	1 cut(s)	2405
CseI	GACGC	1 cut(s)	484
CspAI	ACCGGT	1 cut(s)	1687
CspCI	CAANNNNNGTGG	4 cut(s)	391, 426, 694, 729
DdeI	CTNAG	8 cut(s)	446, 610, 784, 1587, 1722, 2157, 2318, 2658
DinI	GGCGCC	2 cut(s)	646, 1729
DrdI	GACNNNNNNGTC	1 cut(s)	1525
DseDI	GACNNNNNNGTC	1 cut(s)	1525
EaeI	YGGCCR	3 cut(s)	66, 2028, 2399
Eam1104I	CTCTTC	2 cut(s)	870, 1988
EarI	CTCTTC	2 cut(s)	870, 1988
EciI	GGCGGA	3 cut(s)	1314, 1760, 2249
Eco105I	TACGTA	2 cut(s)	360, 2228
Eco130I	CCWWGG	2 cut(s)	1017, 2031
Eco31I	GGTCTC	1 cut(s)	1857
Eco32I	GATATC	1 cut(s)	175
Eco47I	GGWCC	4 cut(s)	1301, 1561, 1680, 2265
Eco57I	CTGAAG	2 cut(s)	1044, 2432
Eco72I	CACGTG	1 cut(s)	1850
Eco88I	CYCGRG	2 cut(s)	1310, 1712
EcoRI	GAATTC	2 cut(s)	293, 488
EcoRII	CCWGG	3 cut(s)	319, 758, 941
EcoRV	GATATC	1 cut(s)	175
EcoT14I	CCWWGG	2 cut(s)	1017, 2031
EgeI	GGCGCC	2 cut(s)	646, 1729
EheI	GGCGCC	2 cut(s)	646, 1729
ErhI	CCWWGG	2 cut(s)	1017, 2031
FaqI	GGGAC	3 cut(s)	1148, 1774, 1867
FauI	CCCGC	2 cut(s)	1335, 1739
FblI	GTMKAC	3 cut(s)	459, 1373, 2612
Fnu4HI	GCNGC	7 cut(s)	198, 615, 1599, 1932, 2334, 2399, 2444
FokI	GGATG	6 cut(s)	320, 1101, 1292, 1685, 2027, 2548
Fsp4HI	GCNGC	7 cut(s)	198, 615, 1599, 1932, 2334, 2399, 2444
FspBI	CTAG	4 cut(s)	1353, 2255, 2274, 2592
GlaI	GCGC	6 cut(s)	211, 646, 870, 1729, 1935, 1970
GluI	GCNGC	7 cut(s)	198, 615, 1599, 1932, 2334, 2399, 2444
GsaI	CCCAGC	4 cut(s)	356, 546, 2535, 2551
GsuI	CTGGAG	2 cut(s)	707, 1465
HaeII	RGCGCY	2 cut(s)	648, 1731
HaeIII	GGCC	9 cut(s)	68, 324, 893, 1412, 1504, 1964, 2030, 2215, 2401
HapII	CCGG	8 cut(s)	69, 129, 408, 744, 895, 1398, 1688, 2129
HgaI	GACGC	1 cut(s)	484
HhaI	GCGC	6 cut(s)	212, 647, 871, 1730, 1936, 1971
Hin1I	GRCGYC	4 cut(s)	645, 1340, 1728, 2143
Hin6I	GCGC	6 cut(s)	210, 645, 869, 1728, 1934, 1969
HinP1I	GCGC	6 cut(s)	210, 645, 869, 1728, 1934, 1969
HincII	GTYRAC	5 cut(s)	499, 1374, 1530, 2147, 2154
HindII	GTYRAC	5 cut(s)	499, 1374, 1530, 2147, 2154
HpaII	CCGG	8 cut(s)	69, 129, 408, 744, 895, 1398, 1688, 2129
Hpy99I	CGWCG	9 cut(s)	241, 776, 1345, 1436, 1522, 1561, 1991, 2486, 2563
HpyAV	CCTTC	4 cut(s)	1019, 1961, 2098, 2486
HpyCH4III	ACNGT	9 cut(s)	119, 139, 237, 457, 1336, 1557, 2098, 2151, 2677
HpyF3I	CTNAG	8 cut(s)	446, 610, 784, 1587, 1722, 2157, 2318, 2658
Hsp92I	GRCGYC	4 cut(s)	645, 1340, 1728, 2143
HspAI	GCGC	6 cut(s)	210, 645, 869, 1728, 1934, 1969
KasI	GGCGCC	2 cut(s)	644, 1727
LguI	GCTCTTC	1 cut(s)	1988
LmnI	GCTCC	3 cut(s)	807, 990, 1917
Lsp1109I	GCAGC	4 cut(s)	209, 626, 2345, 2455
LweI	GCATC	4 cut(s)	221, 1140, 1746, 2518
MaeI	CTAG	4 cut(s)	1353, 2255, 2274, 2592
MaeIII	GTNAC	5 cut(s)	52, 1336, 1536, 1571, 1649
MbiI	CCGCTC	3 cut(s)	381, 683, 2398
MflI	RGATCY	2 cut(s)	958, 2668
MhlI	GDGCHC	2 cut(s)	2000, 2066
MlsI	TGGCCA	1 cut(s)	2030
MluCI	AATT	5 cut(s)	293, 488, 841, 1054, 1917
MluI	ACGCGT	1 cut(s)	558
MluNI	TGGCCA	1 cut(s)	2030
Mly113I	GGCGCC	2 cut(s)	645, 1728
MlyI	GAGTC	6 cut(s)	529, 1369, 1466, 1724, 1849, 2077
MmeI	TCCRAC	8 cut(s)	119, 791, 1323, 1500, 1539, 1777, 2502, 2541
Mox20I	TGGCCA	1 cut(s)	2030
MroXI	GAANNNNTTC	2 cut(s)	1178, 2351
MscI	TGGCCA	1 cut(s)	2030
MseI	TTAA	5 cut(s)	24, 114, 1058, 1185, 2295
MslI	CAYNNNNRTG	6 cut(s)	587, 746, 993, 1688, 1897, 2283
Msp20I	TGGCCA	1 cut(s)	2030
MspA1I	CMGCKG	2 cut(s)	517, 1064
MspI	CCGG	8 cut(s)	69, 129, 408, 744, 895, 1398, 1688, 2129
MspR9I	CCNGG	5 cut(s)	321, 760, 895, 943, 2129
Mva1269I	GAATGC	1 cut(s)	2510
MvaI	CCWGG	3 cut(s)	321, 760, 943
MvnI	CGCG	5 cut(s)	368, 560, 1734, 1936, 1986
NarI	GGCGCC	2 cut(s)	645, 1728
NciI	CCSGG	2 cut(s)	895, 2129
NmeAIII	GCCGAG	4 cut(s)	256, 621, 1275, 1521
NmuCI	GTSAC	4 cut(s)	52, 1336, 1536, 1571
NspI	RCATGY	3 cut(s)	751, 1076, 2641
NspV	TTCGAA	1 cut(s)	2567
OliI	CACNNNNGTG	2 cut(s)	1688, 1897
PaeI	GCATGC	1 cut(s)	1076
PagI	TCATGA	1 cut(s)	2514
PciSI	GCTCTTC	1 cut(s)	1988
PcsI	WCGNNNNNNNCGW	3 cut(s)	372, 648, 2564
PctI	GAATGC	1 cut(s)	2510
PdmI	GAANNNNTTC	2 cut(s)	1178, 2351
PfeI	GAWTC	7 cut(s)	702, 763, 948, 1120, 1156, 2564, 2624
Pfl23II	CGTACG	1 cut(s)	2228
PflFI	GACNNNGTC	2 cut(s)	137, 1525
PinAI	ACCGGT	1 cut(s)	1687
PkrI	GCNGC	7 cut(s)	199, 616, 1600, 1933, 2335, 2400, 2445
PleI	GAGTC	6 cut(s)	528, 1369, 1466, 1723, 1849, 2077
PluTI	GGCGCC	2 cut(s)	648, 1731
PmaCI	CACGTG	1 cut(s)	1850
PmlI	CACGTG	1 cut(s)	1850
PpsI	GAGTC	6 cut(s)	528, 1369, 1466, 1723, 1849, 2077
Ppu21I	YACGTR	3 cut(s)	360, 1850, 2228
PshAI	GACNNNNGTC	1 cut(s)	1566
PshBI	ATTAAT	1 cut(s)	2295
Psp1406I	AACGTT	1 cut(s)	708
Psp6I	CCWGG	3 cut(s)	319, 758, 941
PspCI	CACGTG	1 cut(s)	1850
PspFI	CCCAGC	4 cut(s)	352, 542, 2531, 2547
PspGI	CCWGG	3 cut(s)	319, 758, 941
PspLI	CGTACG	1 cut(s)	2228
PspPI	GGNCC	7 cut(s)	892, 1301, 1502, 1561, 1680, 1962, 2265
PstI	CTGCAG	2 cut(s)	1099, 2445
PsuI	RGATCY	2 cut(s)	958, 2668
PsyI	GACNNNGTC	2 cut(s)	137, 1525
PvuII	CAGCTG	1 cut(s)	1064
RseI	CAYNNNNRTG	6 cut(s)	587, 746, 993, 1688, 1897, 2283
SalI	GTCGAC	1 cut(s)	1372
SapI	GCTCTTC	1 cut(s)	1988
SaqAI	TTAA	5 cut(s)	24, 114, 1058, 1185, 2295
SatI	GCNGC	7 cut(s)	198, 615, 1599, 1932, 2334, 2399, 2444
Sau96I	GGNCC	7 cut(s)	892, 1301, 1502, 1561, 1680, 1962, 2265
ScaI	AGTACT	2 cut(s)	145, 2135
SchI	GAGTC	6 cut(s)	529, 1369, 1466, 1724, 1849, 2077
ScrFI	CCNGG	5 cut(s)	321, 760, 895, 943, 2129
SduI	GDGCHC	2 cut(s)	2000, 2066
SfaNI	GCATC	4 cut(s)	221, 1140, 1746, 2518
SfcI	CTRYAG	5 cut(s)	415, 954, 1095, 2137, 2441
SfoI	GGCGCC	2 cut(s)	646, 1729
SfuI	TTCGAA	1 cut(s)	2567
SgrAI	CRCCGGYG	2 cut(s)	1397, 1687
SinI	GGWCC	4 cut(s)	1301, 1561, 1680, 2265
SmiMI	CAYNNNNRTG	6 cut(s)	587, 746, 993, 1688, 1897, 2283
SmlI	CTYRAG	3 cut(s)	425, 618, 2429
SmoI	CTYRAG	3 cut(s)	425, 618, 2429
SnaBI	TACGTA	2 cut(s)	360, 2228
SpeI	ACTAGT	2 cut(s)	2273, 2591
SphI	GCATGC	1 cut(s)	1076
Sse9I	AATT	5 cut(s)	293, 488, 841, 1054, 1917
SspDI	GGCGCC	2 cut(s)	644, 1727
SspI	AATATT	2 cut(s)	1012, 1235
SspMI	CTAG	4 cut(s)	1353, 2255, 2274, 2592
StyD4I	CCNGG	5 cut(s)	319, 758, 893, 941, 2127
StyI	CCWWGG	2 cut(s)	1017, 2031
TaaI	ACNGT	9 cut(s)	119, 139, 237, 457, 1336, 1557, 2098, 2151, 2677
TaqII	GACCGA	1 cut(s)	1760
TasI	AATT	5 cut(s)	293, 488, 841, 1054, 1917
TatI	WGTACW	6 cut(s)	143, 452, 1656, 1872, 2093, 2133
TauI	GCSGC	3 cut(s)	1601, 1934, 2401
TfiI	GAWTC	7 cut(s)	702, 763, 948, 1120, 1156, 2564, 2624
Tru1I	TTAA	5 cut(s)	24, 114, 1058, 1185, 2295
Tru9I	TTAA	5 cut(s)	24, 114, 1058, 1185, 2295
TscAI	CASTG	5 cut(s)	871, 1587, 2103, 2445, 2680
TseFI	GTSAC	4 cut(s)	52, 1336, 1536, 1571
TseI	GCWGC	4 cut(s)	197, 614, 2333, 2443
Tsp45I	GTSAC	4 cut(s)	52, 1336, 1536, 1571
TspGWI	ACGGA	1 cut(s)	1887
TspRI	CASTG	5 cut(s)	871, 1587, 2103, 2445, 2680
Tth111I	GACNNNGTC	2 cut(s)	137, 1525
VpaK11BI	GGWCC	4 cut(s)	1301, 1561, 1680, 2265
VspI	ATTAAT	1 cut(s)	2295
XapI	RAATTY	3 cut(s)	293, 488, 1917
XbaI	TCTAGA	1 cut(s)	1352
XceI	RCATGY	3 cut(s)	751, 1076, 2641
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1896, 1922
XmiI	GTMKAC	3 cut(s)	459, 1373, 2612
XmnI	GAANNNNTTC	2 cut(s)	1178, 2351
XspI	CTAG	4 cut(s)	1353, 2255, 2274, 2592
ZraI	GACGTC	2 cut(s)	1341, 2144
ZrmI	AGTACT	2 cut(s)	145, 2135

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.