The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2396 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1697 |
| Acc36I | ACCTGC | 3 cut(s) | 1022, 1518, 2396 |
| Acc65I | GGTACC | 1 cut(s) | 2464 |
| AccB1I | GGYRCC | 1 cut(s) | 2464 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1112 |
| AccII | CGCG | 2 cut(s) | 1123, 2970 |
| AciI | CCGC | 3 cut(s) | 1123, 1328, 3098 |
| AclWI | GGATC | 6 cut(s) | 206, 218, 448, 1833, 2712, 3691 |
| AcoI | YGGCCR | 1 cut(s) | 1945 |
| AcsI | RAATTY | 5 cut(s) | 2176, 2811, 2860, 3068, 3125 |
| AcuI | CTGAAG | 4 cut(s) | 1251, 1913, 2271, 2460 |
| AfaI | GTAC | 9 cut(s) | 456, 501, 583, 1163, 1559, 1904, 2466, 3614, 3658 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 474, 475, 601, 877, 1112, 2508, 2792, 2896 |
| AflII | CTTAAG | 2 cut(s) | 3092, 3266 |
| AjiI | CACGTC | 1 cut(s) | 250 |
| AjnI | CCWGG | 8 cut(s) | 376, 619, 1052, 1908, 1947, 2791, 3078, 3425 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 597, 629 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 2409, 2441 |
| Alw21I | GWGCWC | 3 cut(s) | 556, 1934, 1941 |
| Alw26I | GTCTC | 4 cut(s) | 1652, 2637, 3349, 3434 |
| AlwI | GGATC | 6 cut(s) | 206, 218, 448, 1833, 2712, 3691 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 425, 1037, 2591, 2855, 2987 |
| Ama87I | CYCGRG | 1 cut(s) | 971 |
| ApaI | GGGCCC | 1 cut(s) | 1053 |
| ApoI | RAATTY | 5 cut(s) | 2176, 2811, 2860, 3068, 3125 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 699, 731 |
| AseI | ATTAAT | 1 cut(s) | 3221 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 1979, 2631, 3243 |
| Asp718I | GGTACC | 1 cut(s) | 2464 |
| AspA2I | CCTAGG | 1 cut(s) | 62 |
| AspLEI | GCGC | 3 cut(s) | 1123, 1424, 2972 |
| AsuHPI | GGTGA | 5 cut(s) | 140, 2312, 2420, 2442, 3316 |
| AsuNHI | GCTAGC | 1 cut(s) | 3310 |
| AvaI | CYCGRG | 1 cut(s) | 971 |
| AvaII | GGWCC | 1 cut(s) | 1767 |
| AvrII | CCTAGG | 1 cut(s) | 62 |
| AxyI | CCTNAGG | 1 cut(s) | 1986 |
| BaeGI | GKGCMC | 1 cut(s) | 1053 |
| BalI | TGGCCA | 1 cut(s) | 1947 |
| BanI | GGYRCC | 1 cut(s) | 2464 |
| BanII | GRGCYC | 4 cut(s) | 1053, 1934, 1941, 3050 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 189, 221, 1886, 1918 |
| BauI | CACGAG | 1 cut(s) | 927 |
| BbsI | GAAGAC | 3 cut(s) | 524, 1693, 1730 |
| Bbv12I | GWGCWC | 3 cut(s) | 556, 1934, 1941 |
| BbvCI | CCTCAGC | 2 cut(s) | 36, 2562 |
| BccI | CCATC | 9 cut(s) | 473, 812, 1219, 1826, 2263, 2461, 3009, 3253, 3721 |
| BceAI | ACGGC | 2 cut(s) | 654, 1247 |
| BciT130I | CCWGG | 8 cut(s) | 378, 621, 1054, 1910, 1949, 2793, 3080, 3427 |
| BclI | TGATCA | 1 cut(s) | 981 |
| BcoDI | GTCTC | 4 cut(s) | 1652, 2637, 3349, 3434 |
| BfaI | CTAG | 6 cut(s) | 63, 1293, 2039, 2472, 3311, 3359 |
| BfoI | RGCGCY | 1 cut(s) | 1425 |
| BfrI | CTTAAG | 2 cut(s) | 3092, 3266 |
| BfuAI | ACCTGC | 3 cut(s) | 1022, 1518, 2396 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1226 |
| BglII | AGATCT | 1 cut(s) | 2713 |
| BlnI | CCTAGG | 1 cut(s) | 62 |
| BlpI | GCTNAGC | 1 cut(s) | 774 |
| BmcAI | AGTACT | 1 cut(s) | 501 |
| Bme1390I | CCNGG | 8 cut(s) | 378, 621, 1054, 1910, 1949, 2793, 3080, 3427 |
| Bme18I | GGWCC | 1 cut(s) | 1767 |
| BmeT110I | CYCGRG | 1 cut(s) | 971 |
| BmgBI | CACGTC | 1 cut(s) | 250 |
| BmiI | GGNNCC | 6 cut(s) | 1051, 1210, 1769, 2466, 2819, 3047 |
| BmrFI | CCNGG | 8 cut(s) | 378, 621, 1054, 1910, 1949, 2793, 3080, 3427 |
| BmtI | GCTAGC | 1 cut(s) | 3314 |
| BpiI | GAAGAC | 3 cut(s) | 524, 1693, 1730 |
| BpmI | CTGGAG | 4 cut(s) | 1044, 1338, 2775, 3323 |
| Bpu10I | CCTNAGC | 5 cut(s) | 36, 555, 2076, 2562, 3639 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 774 |
| BpuEI | CTTGAG | 2 cut(s) | 35, 3373 |
| BsaI | GGTCTC | 2 cut(s) | 1652, 3434 |
| BsaJI | CCNNGG | 7 cut(s) | 62, 619, 875, 1052, 1693, 2997, 3586 |
| BsaWI | WCCGGW | 1 cut(s) | 2728 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2409, 2439 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 474, 475, 601, 877, 1112, 2508, 2792, 2896 |
| Bse118I | RCCGGY | 1 cut(s) | 2889 |
| Bse1I | ACTGG | 8 cut(s) | 180, 526, 628, 735, 1468, 2215, 2275, 3293 |
| Bse21I | CCTNAGG | 1 cut(s) | 1986 |
| Bse3DI | GCAATG | 4 cut(s) | 717, 1587, 1816, 2880 |
| BseBI | CCWGG | 8 cut(s) | 378, 621, 1054, 1910, 1949, 2793, 3080, 3427 |
| BseDI | CCNNGG | 7 cut(s) | 62, 619, 875, 1052, 1693, 2997, 3586 |
| BseGI | GGATG | 9 cut(s) | 484, 534, 823, 1131, 1693, 2017, 3020, 3604, 3713 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 474, 475, 601, 877, 1112, 2508, 2792, 2896 |
| BseMI | GCAATG | 4 cut(s) | 717, 1587, 1816, 2880 |
| BseNI | ACTGG | 8 cut(s) | 180, 526, 628, 735, 1468, 2215, 2275, 3293 |
| BseRI | GAGGAG | 4 cut(s) | 857, 1326, 2591, 3286 |
| BseSI | GKGCMC | 1 cut(s) | 1053 |
| BseYI | CCCAGC | 6 cut(s) | 812, 2336, 2413, 2855, 2896, 3522 |
| BsgI | GTGCAG | 1 cut(s) | 3146 |
| Bsh1236I | CGCG | 2 cut(s) | 1123, 2970 |
| BshNI | GGYRCC | 1 cut(s) | 2464 |
| BsiHKAI | GWGCWC | 3 cut(s) | 556, 1934, 1941 |
| BsiHKCI | CYCGRG | 1 cut(s) | 971 |
| BsiSI | CCGG | 2 cut(s) | 2729, 2890 |
| BslFI | GGGAC | 2 cut(s) | 1102, 1763 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 474, 475, 601, 877, 1112, 2508, 2792, 2896 |
| BsmAI | GTCTC | 4 cut(s) | 1652, 2637, 3349, 3434 |
| BsmFI | GGGAC | 2 cut(s) | 1102, 1763 |
| BsmI | GAATGC | 3 cut(s) | 272, 1033, 2338 |
| Bso31I | GGTCTC | 2 cut(s) | 1652, 3434 |
| BsoBI | CYCGRG | 1 cut(s) | 971 |
| Bsp120I | GGGCCC | 1 cut(s) | 1049 |
| Bsp1286I | GDGCHC | 5 cut(s) | 556, 1053, 1934, 1941, 3050 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 774 |
| Bsp19I | CCATGG | 1 cut(s) | 1693 |
| BspACI | CCGC | 3 cut(s) | 1123, 1328, 3098 |
| BspFNI | CGCG | 2 cut(s) | 1123, 2970 |
| BspHI | TCATGA | 1 cut(s) | 2514 |
| BspLI | GGNNCC | 6 cut(s) | 1051, 1210, 1769, 2466, 2819, 3047 |
| BspMAI | CTGCAG | 7 cut(s) | 391, 757, 1481, 1515, 2587, 2656, 3492 |
| BspMI | ACCTGC | 3 cut(s) | 1022, 1518, 2396 |
| BspOI | GCTAGC | 1 cut(s) | 3314 |
| BspPI | GGATC | 6 cut(s) | 206, 218, 448, 1833, 2712, 3691 |
| BspQI | GCTCTTC | 2 cut(s) | 1412, 2130 |
| BspT107I | GGYRCC | 1 cut(s) | 2464 |
| BspTI | CTTAAG | 2 cut(s) | 3092, 3266 |
| BspTNI | GGTCTC | 2 cut(s) | 1652, 3434 |
| BsrDI | GCAATG | 4 cut(s) | 717, 1587, 1816, 2880 |
| BsrFI | RCCGGY | 1 cut(s) | 2889 |
| BsrI | ACTGG | 8 cut(s) | 180, 526, 628, 735, 1468, 2215, 2275, 3293 |
| BssAI | RCCGGY | 1 cut(s) | 2889 |
| BssECI | CCNNGG | 7 cut(s) | 62, 619, 875, 1052, 1693, 2997, 3586 |
| BssSI | CACGAG | 1 cut(s) | 927 |
| BssT1I | CCWWGG | 4 cut(s) | 62, 875, 1693, 2997 |
| Bst2BI | CACGAG | 1 cut(s) | 927 |
| Bst2UI | CCWGG | 8 cut(s) | 378, 621, 1054, 1910, 1949, 2793, 3080, 3427 |
| Bst6I | CTCTTC | 7 cut(s) | 82, 1412, 1892, 2130, 2463, 2685, 3078 |
| BstAFI | CTTAAG | 2 cut(s) | 3092, 3266 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 425, 489, 3473, 3487 |
| BstDSI | CCRYGG | 1 cut(s) | 1693 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2506 |
| BstF5I | GGATG | 9 cut(s) | 484, 534, 823, 1131, 1693, 2017, 3020, 3604, 3713 |
| BstFNI | CGCG | 2 cut(s) | 1123, 2970 |
| BstH2I | RGCGCY | 1 cut(s) | 1425 |
| BstHHI | GCGC | 3 cut(s) | 1123, 1424, 2972 |
| BstMAI | GTCTC | 4 cut(s) | 1652, 2637, 3349, 3434 |
| BstNI | CCWGG | 8 cut(s) | 378, 621, 1054, 1910, 1949, 2793, 3080, 3427 |
| BstNSI | RCATGY | 3 cut(s) | 691, 734, 2849 |
| BstSCI | CCNGG | 8 cut(s) | 376, 619, 1052, 1908, 1947, 2791, 3078, 3425 |
| BstSLI | GKGCMC | 1 cut(s) | 1053 |
| BstUI | CGCG | 2 cut(s) | 1123, 2970 |
| BstV2I | GAAGAC | 3 cut(s) | 524, 1693, 1730 |
| BstX2I | RGATCY | 5 cut(s) | 211, 440, 2704, 2713, 3683 |
| BstYI | RGATCY | 5 cut(s) | 211, 440, 2704, 2713, 3683 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1986 |
| BtgI | CCRYGG | 1 cut(s) | 1693 |
| BtrI | CACGTC | 1 cut(s) | 250 |
| BtsCI | GGATG | 9 cut(s) | 484, 534, 823, 1131, 1693, 2017, 3020, 3604, 3713 |
| BtsI | GCAGTG | 2 cut(s) | 866, 2661 |
| BtsIMutI | CAGTG | 6 cut(s) | 866, 899, 924, 1759, 2661, 3328 |
| BveI | ACCTGC | 3 cut(s) | 1022, 1518, 2396 |
| CaiI | CAGNNNCTG | 5 cut(s) | 425, 1037, 2591, 2855, 2987 |
| CciI | TCATGA | 1 cut(s) | 2514 |
| CfoI | GCGC | 3 cut(s) | 1123, 1424, 2972 |
| Cfr10I | RCCGGY | 1 cut(s) | 2889 |
| CsiI | ACCWGGT | 1 cut(s) | 1908 |
| Csp6I | GTAC | 9 cut(s) | 455, 500, 582, 1162, 1558, 1903, 2465, 3613, 3657 |
| CviQI | GTAC | 9 cut(s) | 455, 500, 582, 1162, 1558, 1903, 2465, 3613, 3657 |
| DraI | TTTAAA | 1 cut(s) | 3067 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1697 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1697 |
| EaeI | YGGCCR | 1 cut(s) | 1945 |
| Eam1104I | CTCTTC | 7 cut(s) | 82, 1412, 1892, 2130, 2463, 2685, 3078 |
| EarI | CTCTTC | 7 cut(s) | 82, 1412, 1892, 2130, 2463, 2685, 3078 |
| Ecl136II | GAGCTC | 2 cut(s) | 1932, 1939 |
| Eco130I | CCWWGG | 4 cut(s) | 62, 875, 1693, 2997 |
| Eco24I | GRGCYC | 4 cut(s) | 1053, 1934, 1941, 3050 |
| Eco31I | GGTCTC | 2 cut(s) | 1652, 3434 |
| Eco32I | GATATC | 1 cut(s) | 564 |
| Eco47I | GGWCC | 1 cut(s) | 1767 |
| Eco53kI | GAGCTC | 2 cut(s) | 1932, 1939 |
| Eco57I | CTGAAG | 4 cut(s) | 1251, 1913, 2271, 2460 |
| Eco81I | CCTNAGG | 1 cut(s) | 1986 |
| Eco88I | CYCGRG | 1 cut(s) | 971 |
| EcoICRI | GAGCTC | 2 cut(s) | 1932, 1939 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2506 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1049, 1050, 1767 |
| EcoRII | CCWGG | 8 cut(s) | 376, 619, 1052, 1908, 1947, 2791, 3078, 3425 |
| EcoRV | GATATC | 1 cut(s) | 564 |
| EcoT14I | CCWWGG | 4 cut(s) | 62, 875, 1693, 2997 |
| EcoT22I | ATGCAT | 3 cut(s) | 274, 2161, 3694 |
| EcoT38I | GRGCYC | 4 cut(s) | 1053, 1934, 1941, 3050 |
| ErhI | CCWWGG | 4 cut(s) | 62, 875, 1693, 2997 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 786, 818, 1871, 1903, 3075, 3107 |
| FaqI | GGGAC | 2 cut(s) | 1102, 1763 |
| FauI | CCCGC | 1 cut(s) | 3091 |
| FauNDI | CATATG | 4 cut(s) | 256, 1111, 2356, 3571 |
| FbaI | TGATCA | 1 cut(s) | 981 |
| FokI | GGATG | 9 cut(s) | 491, 521, 830, 1138, 1700, 2024, 3027, 3611, 3700 |
| FriOI | GRGCYC | 4 cut(s) | 1053, 1934, 1941, 3050 |
| FspBI | CTAG | 6 cut(s) | 63, 1293, 2039, 2472, 3311, 3359 |
| GlaI | GCGC | 3 cut(s) | 1122, 1423, 2971 |
| GsaI | CCCAGC | 6 cut(s) | 816, 2340, 2417, 2859, 2900, 3526 |
| GsuI | CTGGAG | 4 cut(s) | 1044, 1338, 2775, 3323 |
| HaeII | RGCGCY | 1 cut(s) | 1425 |
| HapII | CCGG | 2 cut(s) | 2729, 2890 |
| HhaI | GCGC | 3 cut(s) | 1123, 1424, 2972 |
| Hin6I | GCGC | 3 cut(s) | 1121, 1422, 2970 |
| HinP1I | GCGC | 3 cut(s) | 1121, 1422, 2970 |
| HincII | GTYRAC | 2 cut(s) | 97, 3302 |
| HindII | GTYRAC | 2 cut(s) | 97, 3302 |
| HindIII | AAGCTT | 2 cut(s) | 1202, 3089 |
| HinfI | GANTC | 9 cut(s) | 463, 587, 652, 1057, 1148, 1758, 2020, 2953, 3023 |
| HpaII | CCGG | 2 cut(s) | 2729, 2890 |
| HphI | GGTGA | 5 cut(s) | 140, 2312, 2420, 2442, 3316 |
| Hpy166II | GTNNAC | 3 cut(s) | 97, 335, 3302 |
| Hpy8I | GTNNAC | 3 cut(s) | 97, 335, 3302 |
| HpyCH4IV | ACGT | 1 cut(s) | 249 |
| HpySE526I | ACGT | 1 cut(s) | 249 |
| HspAI | GCGC | 3 cut(s) | 1121, 1422, 2970 |
| KpnI | GGTACC | 1 cut(s) | 2468 |
| KroI | GCCGGC | 1 cut(s) | 2889 |
| KroNI | GCCGGC | 1 cut(s) | 2891 |
| Ksp22I | TGATCA | 1 cut(s) | 981 |
| LguI | GCTCTTC | 2 cut(s) | 1412, 2130 |
| MabI | ACCWGGT | 1 cut(s) | 1908 |
| MaeI | CTAG | 6 cut(s) | 63, 1293, 2039, 2472, 3311, 3359 |
| MaeII | ACGT | 1 cut(s) | 249 |
| MfeI | CAATTG | 4 cut(s) | 102, 681, 1848, 2927 |
| MflI | RGATCY | 5 cut(s) | 211, 440, 2704, 2713, 3683 |
| MhlI | GDGCHC | 5 cut(s) | 556, 1053, 1934, 1941, 3050 |
| MlsI | TGGCCA | 1 cut(s) | 1947 |
| MluNI | TGGCCA | 1 cut(s) | 1947 |
| MlyI | GAGTC | 5 cut(s) | 457, 1051, 1142, 2014, 2962 |
| MmeI | TCCRAC | 3 cut(s) | 1051, 1130, 3661 |
| Mox20I | TGGCCA | 1 cut(s) | 1947 |
| Mph1103I | ATGCAT | 3 cut(s) | 274, 2161, 3694 |
| MroNI | GCCGGC | 1 cut(s) | 2889 |
| MroXI | GAANNNNTTC | 3 cut(s) | 1979, 2631, 3243 |
| MscI | TGGCCA | 1 cut(s) | 1947 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1169 |
| Msp20I | TGGCCA | 1 cut(s) | 1947 |
| MspA1I | CMGCKG | 6 cut(s) | 35, 695, 1328, 2855, 2896, 3413 |
| MspCI | CTTAAG | 2 cut(s) | 3092, 3266 |
| MspI | CCGG | 2 cut(s) | 2729, 2890 |
| MspR9I | CCNGG | 8 cut(s) | 378, 621, 1054, 1910, 1949, 2793, 3080, 3427 |
| MunI | CAATTG | 4 cut(s) | 102, 681, 1848, 2927 |
| Mva1269I | GAATGC | 3 cut(s) | 272, 1033, 2338 |
| MvaI | CCWGG | 8 cut(s) | 378, 621, 1054, 1910, 1949, 2793, 3080, 3427 |
| MvnI | CGCG | 2 cut(s) | 1123, 2970 |
| NaeI | GCCGGC | 1 cut(s) | 2891 |
| NcoI | CCATGG | 1 cut(s) | 1693 |
| NdeI | CATATG | 4 cut(s) | 256, 1111, 2356, 3571 |
| NgoMIV | GCCGGC | 1 cut(s) | 2889 |
| NheI | GCTAGC | 1 cut(s) | 3310 |
| NlaIV | GGNNCC | 6 cut(s) | 1051, 1210, 1769, 2466, 2819, 3047 |
| NmuCI | GTSAC | 4 cut(s) | 634, 863, 2300, 2448 |
| NsiI | ATGCAT | 3 cut(s) | 274, 2161, 3694 |
| NspI | RCATGY | 3 cut(s) | 691, 734, 2849 |
| PaeI | GCATGC | 1 cut(s) | 734 |
| PagI | TCATGA | 1 cut(s) | 2514 |
| PaqCI | CACCTGC | 1 cut(s) | 2396 |
| PciSI | GCTCTTC | 2 cut(s) | 1412, 2130 |
| PctI | GAATGC | 3 cut(s) | 272, 1033, 2338 |
| PdiI | GCCGGC | 1 cut(s) | 2891 |
| PdmI | GAANNNNTTC | 3 cut(s) | 1979, 2631, 3243 |
| PfeI | GAWTC | 4 cut(s) | 587, 652, 1758, 3023 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1112 |
| PfoI | TCCNGGA | 1 cut(s) | 376 |
| PleI | GAGTC | 5 cut(s) | 457, 1051, 1142, 2014, 2961 |
| PpsI | GAGTC | 5 cut(s) | 457, 1051, 1142, 2014, 2961 |
| PpuMI | RGGWCCY | 1 cut(s) | 1767 |
| PshBI | ATTAAT | 1 cut(s) | 3221 |
| Psp124BI | GAGCTC | 2 cut(s) | 1934, 1941 |
| Psp5II | RGGWCCY | 1 cut(s) | 1767 |
| Psp6I | CCWGG | 8 cut(s) | 376, 619, 1052, 1908, 1947, 2791, 3078, 3425 |
| PspFI | CCCAGC | 6 cut(s) | 812, 2336, 2413, 2855, 2896, 3522 |
| PspGI | CCWGG | 8 cut(s) | 376, 619, 1052, 1908, 1947, 2791, 3078, 3425 |
| PspN4I | GGNNCC | 6 cut(s) | 1051, 1210, 1769, 2466, 2819, 3047 |
| PspOMI | GGGCCC | 1 cut(s) | 1049 |
| PspPPI | RGGWCCY | 1 cut(s) | 1767 |
| PstI | CTGCAG | 7 cut(s) | 391, 757, 1481, 1515, 2587, 2656, 3492 |
| PstNI | CAGNNNCTG | 5 cut(s) | 425, 1037, 2591, 2855, 2987 |
| PsuI | RGATCY | 5 cut(s) | 211, 440, 2704, 2713, 3683 |
| PvuII | CAGCTG | 5 cut(s) | 35, 695, 2855, 2896, 3413 |
| RsaI | GTAC | 9 cut(s) | 456, 501, 583, 1163, 1559, 1904, 2466, 3614, 3658 |
| RsaNI | GTAC | 9 cut(s) | 455, 500, 582, 1162, 1558, 1903, 2465, 3613, 3657 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1169 |
| SacI | GAGCTC | 2 cut(s) | 1934, 1941 |
| SapI | GCTCTTC | 2 cut(s) | 1412, 2130 |
| SbfI | CCTGCAGG | 1 cut(s) | 3492 |
| ScaI | AGTACT | 1 cut(s) | 501 |
| SchI | GAGTC | 5 cut(s) | 457, 1051, 1142, 2014, 2962 |
| ScrFI | CCNGG | 8 cut(s) | 378, 621, 1054, 1910, 1949, 2793, 3080, 3427 |
| SdaI | CCTGCAGG | 1 cut(s) | 3492 |
| SduI | GDGCHC | 5 cut(s) | 556, 1053, 1934, 1941, 3050 |
| SexAI | ACCWGGT | 1 cut(s) | 1908 |
| SinI | GGWCC | 1 cut(s) | 1767 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1169 |
| SmlI | CTYRAG | 4 cut(s) | 50, 3092, 3266, 3352 |
| SmoI | CTYRAG | 4 cut(s) | 50, 3092, 3266, 3352 |
| SphI | GCATGC | 1 cut(s) | 734 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 3492 |
| SsiI | CCGC | 3 cut(s) | 1123, 1328, 3098 |
| SspI | AATATT | 1 cut(s) | 2526 |
| SspMI | CTAG | 6 cut(s) | 63, 1293, 2039, 2472, 3311, 3359 |
| SstI | GAGCTC | 2 cut(s) | 1934, 1941 |
| StyD4I | CCNGG | 8 cut(s) | 376, 619, 1052, 1908, 1947, 2791, 3078, 3425 |
| StyI | CCWWGG | 4 cut(s) | 62, 875, 1693, 2997 |
| TaiI | ACGT | 1 cut(s) | 252 |
| TaqI | TCGA | 4 cut(s) | 1342, 1773, 1828, 2978 |
| TatI | WGTACW | 4 cut(s) | 454, 499, 1161, 3656 |
| TfiI | GAWTC | 4 cut(s) | 587, 652, 1758, 3023 |
| TscAI | CASTG | 6 cut(s) | 866, 906, 924, 1759, 2661, 3335 |
| TseFI | GTSAC | 4 cut(s) | 634, 863, 2300, 2448 |
| Tsp45I | GTSAC | 4 cut(s) | 634, 863, 2300, 2448 |
| TspGWI | ACGGA | 2 cut(s) | 1536, 2761 |
| TspRI | CASTG | 6 cut(s) | 866, 906, 924, 1759, 2661, 3335 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1112 |
| Vha464I | CTTAAG | 2 cut(s) | 3092, 3266 |
| VpaK11BI | GGWCC | 1 cut(s) | 1767 |
| VspI | ATTAAT | 1 cut(s) | 3221 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2506 |
| XapI | RAATTY | 5 cut(s) | 2176, 2811, 2860, 3068, 3125 |
| XceI | RCATGY | 3 cut(s) | 691, 734, 2849 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1819, 3433 |
| XmaJI | CCTAGG | 1 cut(s) | 62 |
| XmnI | GAANNNNTTC | 3 cut(s) | 1979, 2631, 3243 |
| XspI | CTAG | 6 cut(s) | 63, 1293, 2039, 2472, 3311, 3359 |
| ZrmI | AGTACT | 1 cut(s) | 501 |
| Zsp2I | ATGCAT | 3 cut(s) | 274, 2161, 3694 |