E3 ubiquitin-protein ligase
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1769 |
| AciI | CCGC | 2 cut(s) | 1608, 1758 |
| AclWI | GGATC | 1 cut(s) | 309 |
| AcoI | YGGCCR | 1 cut(s) | 1889 |
| AcsI | RAATTY | 8 cut(s) | 143, 250, 337, 818, 1382, 1457, 1471, 1576 |
| AcuI | CTGAAG | 1 cut(s) | 1398 |
| AfaI | GTAC | 5 cut(s) | 298, 1921, 1927, 2017, 2024 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 44, 1660, 1706 |
| AflII | CTTAAG | 1 cut(s) | 11 |
| AhlI | ACTAGT | 1 cut(s) | 293 |
| AjiI | CACGTC | 2 cut(s) | 480, 2314 |
| AleI | CACNNNNGTG | 1 cut(s) | 266 |
| Alw26I | GTCTC | 2 cut(s) | 1728, 2173 |
| AlwI | GGATC | 1 cut(s) | 309 |
| AoxI | GGCC | 2 cut(s) | 170, 1889 |
| ApeKI | GCWGC | 4 cut(s) | 665, 734, 1562, 2216 |
| ApoI | RAATTY | 8 cut(s) | 143, 250, 337, 818, 1382, 1457, 1471, 1576 |
| AseI | ATTAAT | 1 cut(s) | 330 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 867, 1383, 1586 |
| AspLEI | GCGC | 1 cut(s) | 730 |
| AspS9I | GGNCC | 1 cut(s) | 400 |
| AsuHPI | GGTGA | 5 cut(s) | 27, 696, 1547, 1721, 1817 |
| AvaII | GGWCC | 1 cut(s) | 400 |
| BalI | TGGCCA | 1 cut(s) | 1891 |
| BanI | GGYRCC | 1 cut(s) | 1769 |
| BbvI | GCAGC | 4 cut(s) | 677, 746, 1549, 2203 |
| BccI | CCATC | 8 cut(s) | 118, 387, 518, 610, 1430, 1520, 1760, 2227 |
| BceAI | ACGGC | 1 cut(s) | 2318 |
| BciVI | GTATCC | 1 cut(s) | 121 |
| BclI | TGATCA | 1 cut(s) | 1449 |
| BcoDI | GTCTC | 2 cut(s) | 1728, 2173 |
| BcuI | ACTAGT | 1 cut(s) | 293 |
| BfaI | CTAG | 6 cut(s) | 294, 1073, 1896, 1961, 1983, 2210 |
| BfmI | CTRYAG | 1 cut(s) | 2287 |
| BfrI | CTTAAG | 1 cut(s) | 11 |
| BfuI | GTATCC | 1 cut(s) | 121 |
| BisI | GCNGC | 4 cut(s) | 666, 735, 1563, 2217 |
| BlsI | GCNGC | 4 cut(s) | 667, 736, 1564, 2218 |
| BmcAI | AGTACT | 1 cut(s) | 1927 |
| Bme18I | GGWCC | 1 cut(s) | 400 |
| BmgBI | CACGTC | 2 cut(s) | 480, 2314 |
| BmgT120I | GGNCC | 1 cut(s) | 400 |
| BmiI | GGNNCC | 3 cut(s) | 1022, 1771, 1857 |
| BmsI | GCATC | 6 cut(s) | 73, 90, 457, 766, 889, 1423 |
| BpuEI | CTTGAG | 1 cut(s) | 1259 |
| BsaJI | CCNNGG | 1 cut(s) | 1654 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1386, 1416, 1602, 1632 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 44, 1660, 1706 |
| Bse1I | ACTGG | 3 cut(s) | 855, 1145, 2103 |
| Bse3DI | GCAATG | 3 cut(s) | 664, 1183, 1957 |
| BseDI | CCNNGG | 1 cut(s) | 1654 |
| BseGI | GGATG | 4 cut(s) | 398, 566, 1499, 1669 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 44, 1660, 1706 |
| BseMI | GCAATG | 3 cut(s) | 664, 1183, 1957 |
| BseMII | CTCAG | 4 cut(s) | 12, 171, 1739, 1920 |
| BseNI | ACTGG | 3 cut(s) | 855, 1145, 2103 |
| BseRI | GAGGAG | 2 cut(s) | 167, 543 |
| BseXI | GCAGC | 4 cut(s) | 677, 746, 1549, 2203 |
| BseYI | CCCAGC | 1 cut(s) | 2030 |
| BshFI | GGCC | 2 cut(s) | 172, 1891 |
| BshNI | GGYRCC | 1 cut(s) | 1769 |
| BslFI | GGGAC | 4 cut(s) | 453, 811, 1808, 2282 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 44, 1660, 1706 |
| BsmAI | GTCTC | 2 cut(s) | 1728, 2173 |
| BsmFI | GGGAC | 4 cut(s) | 453, 811, 1808, 2282 |
| BsmI | GAATGC | 2 cut(s) | 421, 1207 |
| BsnI | GGCC | 2 cut(s) | 172, 1891 |
| Bsp1407I | TGTACA | 1 cut(s) | 2022 |
| Bsp143I | GATC | 4 cut(s) | 301, 1449, 1734, 1842 |
| BspACI | CCGC | 2 cut(s) | 1608, 1758 |
| BspANI | GGCC | 2 cut(s) | 172, 1891 |
| BspCNI | CTCAG | 4 cut(s) | 13, 172, 1738, 1921 |
| BspLI | GGNNCC | 3 cut(s) | 1022, 1771, 1857 |
| BspMAI | CTGCAG | 1 cut(s) | 2291 |
| BspPI | GGATC | 1 cut(s) | 309 |
| BspT107I | GGYRCC | 1 cut(s) | 1769 |
| BspTI | CTTAAG | 1 cut(s) | 11 |
| BsrDI | GCAATG | 3 cut(s) | 664, 1183, 1957 |
| BsrGI | TGTACA | 1 cut(s) | 2022 |
| BsrI | ACTGG | 3 cut(s) | 855, 1145, 2103 |
| BssECI | CCNNGG | 1 cut(s) | 1654 |
| BssMI | GATC | 4 cut(s) | 301, 1449, 1734, 1842 |
| BssT1I | CCWWGG | 1 cut(s) | 1654 |
| Bst4CI | ACNGT | 2 cut(s) | 242, 1618 |
| Bst6I | CTCTTC | 1 cut(s) | 110 |
| BstAFI | CTTAAG | 1 cut(s) | 11 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1358 |
| BstAUI | TGTACA | 1 cut(s) | 2022 |
| BstC8I | GCNNGC | 4 cut(s) | 174, 732, 990, 1183 |
| BstDEI | CTNAG | 6 cut(s) | 21, 180, 781, 834, 1725, 1929 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1704 |
| BstF5I | GGATG | 4 cut(s) | 398, 566, 1499, 1669 |
| BstHHI | GCGC | 1 cut(s) | 730 |
| BstKTI | GATC | 4 cut(s) | 304, 1452, 1737, 1845 |
| BstMAI | GTCTC | 2 cut(s) | 1728, 2173 |
| BstMBI | GATC | 4 cut(s) | 301, 1449, 1734, 1842 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 182, 725, 734, 985, 998, 1182, 1358, 1642, 2302 |
| BstNSI | RCATGY | 1 cut(s) | 741 |
| BstSFI | CTRYAG | 1 cut(s) | 2287 |
| BstV1I | GCAGC | 4 cut(s) | 677, 746, 1549, 2203 |
| BsuI | GTATCC | 1 cut(s) | 121 |
| BsuRI | GGCC | 2 cut(s) | 172, 1891 |
| BtgZI | GCGATG | 1 cut(s) | 1007 |
| BtrI | CACGTC | 2 cut(s) | 480, 2314 |
| BtsCI | GGATG | 4 cut(s) | 398, 566, 1499, 1669 |
| BtsIMutI | CAGTG | 3 cut(s) | 247, 261, 1614 |
| Cac8I | GCNNGC | 4 cut(s) | 174, 732, 990, 1183 |
| CfoI | GCGC | 1 cut(s) | 730 |
| Cfr13I | GGNCC | 1 cut(s) | 400 |
| Csp6I | GTAC | 5 cut(s) | 297, 1920, 1926, 2016, 2023 |
| CviQI | GTAC | 5 cut(s) | 297, 1920, 1926, 2016, 2023 |
| DdeI | CTNAG | 6 cut(s) | 21, 180, 781, 834, 1725, 1929 |
| DpnI | GATC | 4 cut(s) | 303, 1451, 1736, 1844 |
| DpnII | GATC | 4 cut(s) | 301, 1449, 1734, 1842 |
| DraI | TTTAAA | 2 cut(s) | 1440, 1747 |
| EaeI | YGGCCR | 1 cut(s) | 1889 |
| Eam1104I | CTCTTC | 1 cut(s) | 110 |
| EarI | CTCTTC | 1 cut(s) | 110 |
| Eco130I | CCWWGG | 1 cut(s) | 1654 |
| Eco147I | AGGCCT | 1 cut(s) | 172 |
| Eco32I | GATATC | 1 cut(s) | 1969 |
| Eco47I | GGWCC | 1 cut(s) | 400 |
| Eco57I | CTGAAG | 1 cut(s) | 1398 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1704 |
| EcoRI | GAATTC | 1 cut(s) | 143 |
| EcoRV | GATATC | 1 cut(s) | 1969 |
| EcoT14I | CCWWGG | 1 cut(s) | 1654 |
| EcoT22I | ATGCAT | 1 cut(s) | 1638 |
| ErhI | CCWWGG | 1 cut(s) | 1654 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1638, 1670 |
| FaqI | GGGAC | 4 cut(s) | 453, 811, 1808, 2282 |
| FauNDI | CATATG | 1 cut(s) | 234 |
| FbaI | TGATCA | 1 cut(s) | 1449 |
| Fnu4HI | GCNGC | 4 cut(s) | 666, 735, 1563, 2217 |
| FokI | GGATG | 4 cut(s) | 405, 553, 1506, 1676 |
| Fsp4HI | GCNGC | 4 cut(s) | 666, 735, 1563, 2217 |
| FspBI | CTAG | 6 cut(s) | 294, 1073, 1896, 1961, 1983, 2210 |
| GlaI | GCGC | 1 cut(s) | 729 |
| GluI | GCNGC | 4 cut(s) | 666, 735, 1563, 2217 |
| GsaI | CCCAGC | 1 cut(s) | 2034 |
| HaeIII | GGCC | 2 cut(s) | 172, 1891 |
| HhaI | GCGC | 1 cut(s) | 730 |
| Hin6I | GCGC | 1 cut(s) | 728 |
| HinP1I | GCGC | 1 cut(s) | 728 |
| HincII | GTYRAC | 2 cut(s) | 483, 1669 |
| HindII | GTYRAC | 2 cut(s) | 483, 1669 |
| HindIII | AAGCTT | 1 cut(s) | 8 |
| HinfI | GANTC | 6 cut(s) | 107, 563, 799, 1065, 1109, 1955 |
| HphI | GGTGA | 5 cut(s) | 27, 696, 1547, 1721, 1817 |
| Hpy166II | GTNNAC | 4 cut(s) | 67, 483, 1372, 1669 |
| Hpy188I | TCNGA | 8 cut(s) | 142, 675, 762, 1332, 1378, 1432, 1630, 1789 |
| Hpy188III | TCNNGA | 9 cut(s) | 426, 455, 644, 860, 1238, 1738, 1859, 1961, 2053 |
| Hpy8I | GTNNAC | 4 cut(s) | 67, 483, 1372, 1669 |
| HpyAV | CCTTC | 4 cut(s) | 142, 391, 1700, 1784 |
| HpyCH4III | ACNGT | 2 cut(s) | 242, 1618 |
| HpyCH4IV | ACGT | 3 cut(s) | 381, 479, 2313 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 182, 725, 734, 985, 998, 1182, 1358, 1642, 2302 |
| HpyF3I | CTNAG | 6 cut(s) | 21, 180, 781, 834, 1725, 1929 |
| HpySE526I | ACGT | 3 cut(s) | 381, 479, 2313 |
| HspAI | GCGC | 1 cut(s) | 728 |
| Ksp22I | TGATCA | 1 cut(s) | 1449 |
| Kzo9I | GATC | 4 cut(s) | 301, 1449, 1734, 1842 |
| LmnI | GCTCC | 5 cut(s) | 154, 416, 586, 1516, 1861 |
| Lsp1109I | GCAGC | 4 cut(s) | 677, 746, 1549, 2203 |
| LweI | GCATC | 6 cut(s) | 73, 90, 457, 766, 889, 1423 |
| MaeI | CTAG | 6 cut(s) | 294, 1073, 1896, 1961, 1983, 2210 |
| MaeII | ACGT | 3 cut(s) | 381, 479, 2313 |
| MaeIII | GTNAC | 3 cut(s) | 377, 1189, 1805 |
| MalI | GATC | 4 cut(s) | 303, 1451, 1736, 1844 |
| MboI | GATC | 4 cut(s) | 301, 1449, 1734, 1842 |
| MfeI | CAATTG | 2 cut(s) | 1122, 1341 |
| MlsI | TGGCCA | 1 cut(s) | 1891 |
| MluNI | TGGCCA | 1 cut(s) | 1891 |
| MlyI | GAGTC | 2 cut(s) | 572, 793 |
| MmeI | TCCRAC | 2 cut(s) | 905, 1263 |
| Mox20I | TGGCCA | 1 cut(s) | 1891 |
| Mph1103I | ATGCAT | 1 cut(s) | 1638 |
| MroXI | GAANNNNTTC | 3 cut(s) | 867, 1383, 1586 |
| MscI | TGGCCA | 1 cut(s) | 1891 |
| MslI | CAYNNNNRTG | 4 cut(s) | 81, 266, 1524, 1850 |
| Msp20I | TGGCCA | 1 cut(s) | 1891 |
| MspA1I | CMGCKG | 2 cut(s) | 668, 2245 |
| MspCI | CTTAAG | 1 cut(s) | 11 |
| MunI | CAATTG | 2 cut(s) | 1122, 1341 |
| Mva1269I | GAATGC | 2 cut(s) | 421, 1207 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 182, 725, 734, 985, 998, 1182, 1358, 1642, 2302 |
| NdeI | CATATG | 1 cut(s) | 234 |
| NdeII | GATC | 4 cut(s) | 301, 1449, 1734, 1842 |
| NlaIV | GGNNCC | 3 cut(s) | 1022, 1771, 1857 |
| NmuCI | GTSAC | 1 cut(s) | 1805 |
| NsiI | ATGCAT | 1 cut(s) | 1638 |
| NspI | RCATGY | 1 cut(s) | 741 |
| OliI | CACNNNNGTG | 1 cut(s) | 266 |
| PceI | AGGCCT | 1 cut(s) | 172 |
| PctI | GAATGC | 2 cut(s) | 421, 1207 |
| PdmI | GAANNNNTTC | 3 cut(s) | 867, 1383, 1586 |
| PfeI | GAWTC | 4 cut(s) | 107, 1065, 1109, 1955 |
| PkrI | GCNGC | 4 cut(s) | 667, 736, 1564, 2218 |
| PleI | GAGTC | 2 cut(s) | 571, 793 |
| PpsI | GAGTC | 2 cut(s) | 571, 793 |
| PshBI | ATTAAT | 1 cut(s) | 330 |
| PspFI | CCCAGC | 1 cut(s) | 2030 |
| PspN4I | GGNNCC | 3 cut(s) | 1022, 1771, 1857 |
| PspPI | GGNCC | 1 cut(s) | 400 |
| PstI | CTGCAG | 1 cut(s) | 2291 |
| PvuII | CAGCTG | 2 cut(s) | 668, 2245 |
| RsaI | GTAC | 5 cut(s) | 298, 1921, 1927, 2017, 2024 |
| RsaNI | GTAC | 5 cut(s) | 297, 1920, 1926, 2016, 2023 |
| RseI | CAYNNNNRTG | 4 cut(s) | 81, 266, 1524, 1850 |
| SatI | GCNGC | 4 cut(s) | 666, 735, 1563, 2217 |
| Sau3AI | GATC | 4 cut(s) | 301, 1449, 1734, 1842 |
| Sau96I | GGNCC | 1 cut(s) | 400 |
| ScaI | AGTACT | 1 cut(s) | 1927 |
| SchI | GAGTC | 2 cut(s) | 572, 793 |
| SfaNI | GCATC | 6 cut(s) | 73, 90, 457, 766, 889, 1423 |
| SfcI | CTRYAG | 1 cut(s) | 2287 |
| SinI | GGWCC | 1 cut(s) | 400 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 81, 266, 1524, 1850 |
| SmlI | CTYRAG | 2 cut(s) | 11, 1238 |
| SmoI | CTYRAG | 2 cut(s) | 11, 1238 |
| SpeI | ACTAGT | 1 cut(s) | 293 |
| SseBI | AGGCCT | 1 cut(s) | 172 |
| SsiI | CCGC | 2 cut(s) | 1608, 1758 |
| SspMI | CTAG | 6 cut(s) | 294, 1073, 1896, 1961, 1983, 2210 |
| StuI | AGGCCT | 1 cut(s) | 172 |
| StyI | CCWWGG | 1 cut(s) | 1654 |
| TaaI | ACNGT | 2 cut(s) | 242, 1618 |
| TaiI | ACGT | 3 cut(s) | 384, 482, 2316 |
| TaqI | TCGA | 4 cut(s) | 122, 918, 1063, 1168 |
| TatI | WGTACW | 3 cut(s) | 1919, 1925, 2022 |
| TfiI | GAWTC | 4 cut(s) | 107, 1065, 1109, 1955 |
| TscAI | CASTG | 3 cut(s) | 247, 268, 1621 |
| TseFI | GTSAC | 1 cut(s) | 1805 |
| TseI | GCWGC | 4 cut(s) | 665, 734, 1562, 2216 |
| Tsp45I | GTSAC | 1 cut(s) | 1805 |
| TspGWI | ACGGA | 2 cut(s) | 314, 2073 |
| TspRI | CASTG | 3 cut(s) | 247, 268, 1621 |
| Vha464I | CTTAAG | 1 cut(s) | 11 |
| VpaK11BI | GGWCC | 1 cut(s) | 400 |
| VspI | ATTAAT | 1 cut(s) | 330 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1704 |
| XapI | RAATTY | 8 cut(s) | 143, 250, 337, 818, 1382, 1457, 1471, 1576 |
| XbaI | TCTAGA | 1 cut(s) | 1960 |
| XceI | RCATGY | 1 cut(s) | 741 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 239 |
| XmnI | GAANNNNTTC | 3 cut(s) | 867, 1383, 1586 |
| XspI | CTAG | 6 cut(s) | 294, 1073, 1896, 1961, 1983, 2210 |
| ZrmI | AGTACT | 1 cut(s) | 1927 |
| Zsp2I | ATGCAT | 1 cut(s) | 1638 |