The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2831 |
| Acc16I | TGCGCA | 1 cut(s) | 518 |
| Acc36I | ACCTGC | 2 cut(s) | 208, 1354 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2020 |
| AccI | GTMKAC | 1 cut(s) | 960 |
| AciI | CCGC | 7 cut(s) | 309, 433, 1285, 2066, 2078, 2106, 2722 |
| AclWI | GGATC | 5 cut(s) | 458, 471, 1055, 2040, 2053 |
| AcoI | YGGCCR | 1 cut(s) | 1723 |
| AcsI | RAATTY | 3 cut(s) | 143, 615, 1398 |
| AcuI | CTGAAG | 5 cut(s) | 407, 1979, 2381, 2515, 2751 |
| AcyI | GRCGYC | 1 cut(s) | 2828 |
| AfaI | GTAC | 3 cut(s) | 2525, 2804, 2886 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 120, 1388, 2020 |
| AflII | CTTAAG | 1 cut(s) | 2580 |
| AflIII | ACRYGT | 1 cut(s) | 23 |
| AjnI | CCWGG | 6 cut(s) | 372, 487, 605, 1878, 1902, 2704 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 393, 425 |
| Alw21I | GWGCWC | 3 cut(s) | 863, 871, 1952 |
| Alw26I | GTCTC | 3 cut(s) | 874, 2662, 2835 |
| Alw44I | GTGCAC | 2 cut(s) | 859, 867 |
| AlwI | GGATC | 5 cut(s) | 458, 471, 1055, 2040, 2053 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1449 |
| AoxI | GGCC | 4 cut(s) | 266, 1067, 1723, 2085 |
| ApaLI | GTGCAC | 2 cut(s) | 859, 867 |
| ApeKI | GCWGC | 8 cut(s) | 214, 658, 1602, 1627, 2080, 2542, 2641, 2715 |
| ApoI | RAATTY | 3 cut(s) | 143, 615, 1398 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1201, 2471 |
| AspA2I | CCTAGG | 1 cut(s) | 1972 |
| AspLEI | GCGC | 2 cut(s) | 519, 1538 |
| AspS9I | GGNCC | 3 cut(s) | 404, 1391, 1932 |
| AsuHPI | GGTGA | 7 cut(s) | 184, 295, 520, 766, 1828, 1837, 1903 |
| AsuNHI | GCTAGC | 2 cut(s) | 844, 1623 |
| AvaII | GGWCC | 3 cut(s) | 404, 1391, 1932 |
| AvrII | CCTAGG | 1 cut(s) | 1972 |
| AxyI | CCTNAGG | 1 cut(s) | 1661 |
| BaeGI | GKGCMC | 2 cut(s) | 863, 871 |
| BaeI | ACNNNNGTAYC | 6 cut(s) | 93, 126, 338, 371, 2786, 2819 |
| BalI | TGGCCA | 1 cut(s) | 1725 |
| BamHI | GGATCC | 2 cut(s) | 463, 2045 |
| BanII | GRGCYC | 1 cut(s) | 1952 |
| BauI | CACGAG | 1 cut(s) | 2287 |
| Bbv12I | GWGCWC | 3 cut(s) | 863, 871, 1952 |
| BbvCI | CCTCAGC | 1 cut(s) | 1472 |
| BbvI | GCAGC | 8 cut(s) | 226, 645, 1589, 1639, 2067, 2554, 2653, 2702 |
| BccI | CCATC | 6 cut(s) | 1048, 1807, 1846, 1909, 1922, 2949 |
| BceAI | ACGGC | 2 cut(s) | 259, 2674 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 2091, 2125, 2903, 2937 |
| BciT130I | CCWGG | 6 cut(s) | 374, 489, 607, 1880, 1904, 2706 |
| BciVI | GTATCC | 2 cut(s) | 99, 121 |
| BcoDI | GTCTC | 3 cut(s) | 874, 2662, 2835 |
| BfaI | CTAG | 4 cut(s) | 503, 845, 1624, 1973 |
| BfmI | CTRYAG | 4 cut(s) | 2081, 2639, 2716, 2844 |
| BfrI | CTTAAG | 1 cut(s) | 2580 |
| BfuAI | ACCTGC | 2 cut(s) | 208, 1354 |
| BfuI | GTATCC | 2 cut(s) | 99, 121 |
| BlnI | CCTAGG | 1 cut(s) | 1972 |
| BlpI | GCTNAGC | 3 cut(s) | 71, 820, 2069 |
| Bme1390I | CCNGG | 6 cut(s) | 374, 489, 607, 1880, 1904, 2706 |
| Bme18I | GGWCC | 3 cut(s) | 404, 1391, 1932 |
| BmgT120I | GGNCC | 3 cut(s) | 404, 1391, 1932 |
| BmiI | GGNNCC | 5 cut(s) | 406, 465, 1204, 1933, 2047 |
| BmrFI | CCNGG | 6 cut(s) | 374, 489, 607, 1880, 1904, 2706 |
| BmrI | ACTGGG | 1 cut(s) | 1830 |
| BmsI | GCATC | 7 cut(s) | 513, 654, 1071, 1448, 2093, 2733, 2907 |
| BmtI | GCTAGC | 2 cut(s) | 848, 1627 |
| BmuI | ACTGGG | 1 cut(s) | 1830 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2043, 2075 |
| BpmI | CTGGAG | 3 cut(s) | 718, 1925, 2198 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1472 |
| Bpu1102I | GCTNAGC | 3 cut(s) | 71, 820, 2069 |
| BpuEI | CTTGAG | 1 cut(s) | 604 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2044 |
| BsaHI | GRCGYC | 1 cut(s) | 2828 |
| BsaJI | CCNNGG | 6 cut(s) | 400, 487, 488, 1972, 2704, 2814 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 120, 1388, 2020 |
| Bse118I | RCCGGY | 1 cut(s) | 264 |
| Bse1I | ACTGG | 7 cut(s) | 144, 864, 1327, 1825, 2025, 2215, 2521 |
| Bse21I | CCTNAGG | 1 cut(s) | 1661 |
| Bse3DI | GCAATG | 2 cut(s) | 1365, 2609 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2044 |
| BseBI | CCWGG | 6 cut(s) | 374, 489, 607, 1880, 1904, 2706 |
| BseDI | CCNNGG | 6 cut(s) | 400, 487, 488, 1972, 2704, 2814 |
| BseGI | GGATG | 7 cut(s) | 129, 239, 915, 1059, 1797, 1806, 1933 |
| BseJI | GATNNNNATC | 1 cut(s) | 2044 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 120, 1388, 2020 |
| BseMI | GCAATG | 2 cut(s) | 1365, 2609 |
| BseNI | ACTGG | 7 cut(s) | 144, 864, 1327, 1825, 2025, 2215, 2521 |
| BseRI | GAGGAG | 2 cut(s) | 1546, 1843 |
| BseSI | GKGCMC | 2 cut(s) | 863, 871 |
| BseXI | GCAGC | 8 cut(s) | 226, 645, 1589, 1639, 2067, 2554, 2653, 2702 |
| BseYI | CCCAGC | 1 cut(s) | 2347 |
| BsgI | GTGCAG | 1 cut(s) | 2933 |
| BshFI | GGCC | 4 cut(s) | 268, 1069, 1725, 2087 |
| BsiHKAI | GWGCWC | 3 cut(s) | 863, 871, 1952 |
| BsiSI | CCGG | 1 cut(s) | 265 |
| BslFI | GGGAC | 2 cut(s) | 505, 1945 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 120, 1388, 2020 |
| BsmAI | GTCTC | 3 cut(s) | 874, 2662, 2835 |
| BsmBI | CGTCTC | 2 cut(s) | 2662, 2835 |
| BsmFI | GGGAC | 2 cut(s) | 505, 1945 |
| BsmI | GAATGC | 1 cut(s) | 2384 |
| BsnI | GGCC | 4 cut(s) | 268, 1069, 1725, 2087 |
| Bsp1286I | GDGCHC | 3 cut(s) | 863, 871, 1952 |
| Bsp143I | GATC | 9 cut(s) | 168, 236, 463, 729, 1047, 2045, 2053, 2166, 2895 |
| Bsp1720I | GCTNAGC | 3 cut(s) | 71, 820, 2069 |
| BspACI | CCGC | 7 cut(s) | 309, 433, 1285, 2066, 2078, 2106, 2722 |
| BspANI | GGCC | 4 cut(s) | 268, 1069, 1725, 2087 |
| BspHI | TCATGA | 2 cut(s) | 222, 876 |
| BspLI | GGNNCC | 5 cut(s) | 406, 465, 1204, 1933, 2047 |
| BspMAI | CTGCAG | 3 cut(s) | 2085, 2643, 2720 |
| BspMI | ACCTGC | 2 cut(s) | 208, 1354 |
| BspOI | GCTAGC | 2 cut(s) | 848, 1627 |
| BspPI | GGATC | 5 cut(s) | 458, 471, 1055, 2040, 2053 |
| BspQI | GCTCTTC | 1 cut(s) | 1352 |
| BspTI | CTTAAG | 1 cut(s) | 2580 |
| BsrDI | GCAATG | 2 cut(s) | 1365, 2609 |
| BsrFI | RCCGGY | 1 cut(s) | 264 |
| BsrI | ACTGG | 7 cut(s) | 144, 864, 1327, 1825, 2025, 2215, 2521 |
| BssAI | RCCGGY | 1 cut(s) | 264 |
| BssECI | CCNNGG | 6 cut(s) | 400, 487, 488, 1972, 2704, 2814 |
| BssMI | GATC | 9 cut(s) | 168, 236, 463, 729, 1047, 2045, 2053, 2166, 2895 |
| BssNI | GRCGYC | 1 cut(s) | 2828 |
| BssSI | CACGAG | 1 cut(s) | 2287 |
| BssT1I | CCWWGG | 2 cut(s) | 400, 1972 |
| Bst2BI | CACGAG | 1 cut(s) | 2287 |
| Bst2UI | CCWGG | 6 cut(s) | 374, 489, 607, 1880, 1904, 2706 |
| Bst6I | CTCTTC | 5 cut(s) | 878, 1352, 1790, 2306, 2491 |
| BstACI | GRCGYC | 1 cut(s) | 2828 |
| BstAFI | CTTAAG | 1 cut(s) | 2580 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2715 |
| BstC8I | GCNNGC | 9 cut(s) | 846, 1172, 1625, 2026, 2075, 2085, 2540, 2588, 2720 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1386 |
| BstF5I | GGATG | 7 cut(s) | 129, 239, 915, 1059, 1797, 1806, 1933 |
| BstHHI | GCGC | 2 cut(s) | 519, 1538 |
| BstKTI | GATC | 9 cut(s) | 171, 239, 466, 732, 1050, 2048, 2056, 2169, 2898 |
| BstMAI | GTCTC | 3 cut(s) | 874, 2662, 2835 |
| BstMBI | GATC | 9 cut(s) | 168, 236, 463, 729, 1047, 2045, 2053, 2166, 2895 |
| BstNI | CCWGG | 6 cut(s) | 374, 489, 607, 1880, 1904, 2706 |
| BstNSI | RCATGY | 3 cut(s) | 832, 2028, 2077 |
| BstSCI | CCNGG | 6 cut(s) | 372, 487, 605, 1878, 1902, 2704 |
| BstSFI | CTRYAG | 4 cut(s) | 2081, 2639, 2716, 2844 |
| BstSLI | GKGCMC | 2 cut(s) | 863, 871 |
| BstV1I | GCAGC | 8 cut(s) | 226, 645, 1589, 1639, 2067, 2554, 2653, 2702 |
| BstX2I | RGATCY | 2 cut(s) | 463, 2045 |
| BstYI | RGATCY | 2 cut(s) | 463, 2045 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1661 |
| BsuI | GTATCC | 2 cut(s) | 99, 121 |
| BsuRI | GGCC | 4 cut(s) | 268, 1069, 1725, 2087 |
| BtgZI | GCGATG | 2 cut(s) | 1189, 2116 |
| BtsCI | GGATG | 7 cut(s) | 129, 239, 915, 1059, 1797, 1806, 1933 |
| BtsI | GCAGTG | 3 cut(s) | 2556, 2636, 2909 |
| BveI | ACCTGC | 2 cut(s) | 208, 1354 |
| Cac8I | GCNNGC | 9 cut(s) | 846, 1172, 1625, 2026, 2075, 2085, 2540, 2588, 2720 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1449 |
| CciI | TCATGA | 2 cut(s) | 222, 876 |
| CfoI | GCGC | 2 cut(s) | 519, 1538 |
| Cfr10I | RCCGGY | 1 cut(s) | 264 |
| Cfr13I | GGNCC | 3 cut(s) | 404, 1391, 1932 |
| CsiI | ACCWGGT | 1 cut(s) | 372 |
| Csp6I | GTAC | 3 cut(s) | 2524, 2803, 2885 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1287, 1322 |
| CviQI | GTAC | 3 cut(s) | 2524, 2803, 2885 |
| DpnI | GATC | 9 cut(s) | 170, 238, 465, 731, 1049, 2047, 2055, 2168, 2897 |
| DpnII | GATC | 9 cut(s) | 168, 236, 463, 729, 1047, 2045, 2053, 2166, 2895 |
| DraI | TTTAAA | 1 cut(s) | 389 |
| EaeI | YGGCCR | 1 cut(s) | 1723 |
| Eam1104I | CTCTTC | 5 cut(s) | 878, 1352, 1790, 2306, 2491 |
| EarI | CTCTTC | 5 cut(s) | 878, 1352, 1790, 2306, 2491 |
| Ecl136II | GAGCTC | 1 cut(s) | 1950 |
| Eco130I | CCWWGG | 2 cut(s) | 400, 1972 |
| Eco24I | GRGCYC | 1 cut(s) | 1952 |
| Eco32I | GATATC | 1 cut(s) | 2222 |
| Eco47I | GGWCC | 3 cut(s) | 404, 1391, 1932 |
| Eco53kI | GAGCTC | 1 cut(s) | 1950 |
| Eco57I | CTGAAG | 5 cut(s) | 407, 1979, 2381, 2515, 2751 |
| Eco81I | CCTNAGG | 1 cut(s) | 1661 |
| EcoICRI | GAGCTC | 1 cut(s) | 1950 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1386 |
| EcoO109I | RGGNCCY | 2 cut(s) | 404, 1932 |
| EcoRI | GAATTC | 1 cut(s) | 143 |
| EcoRII | CCWGG | 6 cut(s) | 372, 487, 605, 1878, 1902, 2704 |
| EcoRV | GATATC | 1 cut(s) | 2222 |
| EcoT14I | CCWWGG | 2 cut(s) | 400, 1972 |
| EcoT38I | GRGCYC | 1 cut(s) | 1952 |
| ErhI | CCWWGG | 2 cut(s) | 400, 1972 |
| Esp3I | CGTCTC | 2 cut(s) | 2662, 2835 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1398, 1430, 2574, 2606 |
| FaqI | GGGAC | 2 cut(s) | 505, 1945 |
| FauNDI | CATATG | 1 cut(s) | 2799 |
| FblI | GTMKAC | 1 cut(s) | 960 |
| FokI | GGATG | 7 cut(s) | 136, 246, 922, 1066, 1804, 1813, 1940 |
| FriOI | GRGCYC | 1 cut(s) | 1952 |
| FspBI | CTAG | 4 cut(s) | 503, 845, 1624, 1973 |
| FspI | TGCGCA | 1 cut(s) | 518 |
| GlaI | GCGC | 2 cut(s) | 518, 1537 |
| GsaI | CCCAGC | 1 cut(s) | 2351 |
| GsuI | CTGGAG | 3 cut(s) | 718, 1925, 2198 |
| HaeIII | GGCC | 4 cut(s) | 268, 1069, 1725, 2087 |
| HapII | CCGG | 1 cut(s) | 265 |
| HhaI | GCGC | 2 cut(s) | 519, 1538 |
| Hin1I | GRCGYC | 1 cut(s) | 2828 |
| Hin6I | GCGC | 2 cut(s) | 517, 1536 |
| HinP1I | GCGC | 2 cut(s) | 517, 1536 |
| HpaII | CCGG | 1 cut(s) | 265 |
| HphI | GGTGA | 7 cut(s) | 184, 295, 520, 766, 1828, 1837, 1903 |
| Hpy166II | GTNNAC | 6 cut(s) | 21, 757, 861, 869, 961, 2357 |
| Hpy188III | TCNNGA | 6 cut(s) | 223, 877, 1051, 1479, 2049, 2177 |
| Hpy8I | GTNNAC | 6 cut(s) | 21, 757, 861, 869, 961, 2357 |
| Hpy99I | CGWCG | 2 cut(s) | 161, 371 |
| HpyAV | CCTTC | 9 cut(s) | 431, 658, 1191, 1750, 1882, 1885, 2495, 2817, 2866 |
| HpyCH4IV | ACGT | 3 cut(s) | 25, 2526, 2828 |
| HpySE526I | ACGT | 3 cut(s) | 25, 2526, 2828 |
| Hsp92I | GRCGYC | 1 cut(s) | 2828 |
| HspAI | GCGC | 2 cut(s) | 517, 1536 |
| Kzo9I | GATC | 9 cut(s) | 168, 236, 463, 729, 1047, 2045, 2053, 2166, 2895 |
| LguI | GCTCTTC | 1 cut(s) | 1352 |
| LmnI | GCTCC | 9 cut(s) | 1533, 1783, 1830, 1947, 1955, 2016, 2217, 2490, 2535 |
| Lsp1109I | GCAGC | 8 cut(s) | 226, 645, 1589, 1639, 2067, 2554, 2653, 2702 |
| LweI | GCATC | 7 cut(s) | 513, 654, 1071, 1448, 2093, 2733, 2907 |
| MabI | ACCWGGT | 1 cut(s) | 372 |
| MaeI | CTAG | 4 cut(s) | 503, 845, 1624, 1973 |
| MaeII | ACGT | 3 cut(s) | 25, 2526, 2828 |
| MaeIII | GTNAC | 9 cut(s) | 34, 126, 508, 1561, 1816, 1856, 2329, 2699, 2781 |
| MalI | GATC | 9 cut(s) | 170, 238, 465, 731, 1049, 2047, 2055, 2168, 2897 |
| MboI | GATC | 9 cut(s) | 168, 236, 463, 729, 1047, 2045, 2053, 2166, 2895 |
| MfeI | CAATTG | 3 cut(s) | 1304, 2155, 2569 |
| MflI | RGATCY | 2 cut(s) | 463, 2045 |
| MhlI | GDGCHC | 3 cut(s) | 863, 871, 1952 |
| MlsI | TGGCCA | 1 cut(s) | 1725 |
| MluNI | TGGCCA | 1 cut(s) | 1725 |
| MlyI | GAGTC | 3 cut(s) | 636, 1683, 2697 |
| MmeI | TCCRAC | 6 cut(s) | 116, 180, 1675, 1745, 2038, 2288 |
| Mox20I | TGGCCA | 1 cut(s) | 1725 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1201, 2471 |
| MscI | TGGCCA | 1 cut(s) | 1725 |
| MslI | CAYNNNNRTG | 1 cut(s) | 227 |
| Msp20I | TGGCCA | 1 cut(s) | 1725 |
| MspA1I | CMGCKG | 4 cut(s) | 550, 1630, 2068, 2080 |
| MspCI | CTTAAG | 1 cut(s) | 2580 |
| MspI | CCGG | 1 cut(s) | 265 |
| MspR9I | CCNGG | 6 cut(s) | 374, 489, 607, 1880, 1904, 2706 |
| MunI | CAATTG | 3 cut(s) | 1304, 2155, 2569 |
| Mva1269I | GAATGC | 1 cut(s) | 2384 |
| MvaI | CCWGG | 6 cut(s) | 374, 489, 607, 1880, 1904, 2706 |
| NdeI | CATATG | 1 cut(s) | 2799 |
| NdeII | GATC | 9 cut(s) | 168, 236, 463, 729, 1047, 2045, 2053, 2166, 2895 |
| NheI | GCTAGC | 2 cut(s) | 844, 1623 |
| NlaIV | GGNNCC | 5 cut(s) | 406, 465, 1204, 1933, 2047 |
| NmuCI | GTSAC | 6 cut(s) | 34, 126, 508, 1561, 1816, 2781 |
| NsbI | TGCGCA | 1 cut(s) | 518 |
| NspI | RCATGY | 3 cut(s) | 832, 2028, 2077 |
| PaeI | GCATGC | 2 cut(s) | 2028, 2077 |
| PagI | TCATGA | 2 cut(s) | 222, 876 |
| PasI | CCCWGGG | 1 cut(s) | 488 |
| PciSI | GCTCTTC | 1 cut(s) | 1352 |
| PctI | GAATGC | 1 cut(s) | 2384 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1201, 2471 |
| PfeI | GAWTC | 8 cut(s) | 180, 204, 286, 942, 1247, 1291, 2416, 2949 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2020 |
| PleI | GAGTC | 3 cut(s) | 636, 1683, 2696 |
| PpsI | GAGTC | 3 cut(s) | 636, 1683, 2696 |
| PpuMI | RGGWCCY | 2 cut(s) | 404, 1932 |
| Psp124BI | GAGCTC | 1 cut(s) | 1952 |
| Psp5II | RGGWCCY | 2 cut(s) | 404, 1932 |
| Psp6I | CCWGG | 6 cut(s) | 372, 487, 605, 1878, 1902, 2704 |
| PspFI | CCCAGC | 1 cut(s) | 2347 |
| PspGI | CCWGG | 6 cut(s) | 372, 487, 605, 1878, 1902, 2704 |
| PspN4I | GGNNCC | 5 cut(s) | 406, 465, 1204, 1933, 2047 |
| PspPI | GGNCC | 3 cut(s) | 404, 1391, 1932 |
| PspPPI | RGGWCCY | 2 cut(s) | 404, 1932 |
| PstI | CTGCAG | 3 cut(s) | 2085, 2643, 2720 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1449 |
| PsuI | RGATCY | 2 cut(s) | 463, 2045 |
| PvuII | CAGCTG | 2 cut(s) | 550, 1630 |
| RsaI | GTAC | 3 cut(s) | 2525, 2804, 2886 |
| RsaNI | GTAC | 3 cut(s) | 2524, 2803, 2885 |
| RseI | CAYNNNNRTG | 1 cut(s) | 227 |
| SacI | GAGCTC | 1 cut(s) | 1952 |
| SapI | GCTCTTC | 1 cut(s) | 1352 |
| Sau3AI | GATC | 9 cut(s) | 168, 236, 463, 729, 1047, 2045, 2053, 2166, 2895 |
| Sau96I | GGNCC | 3 cut(s) | 404, 1391, 1932 |
| SchI | GAGTC | 3 cut(s) | 636, 1683, 2697 |
| ScrFI | CCNGG | 6 cut(s) | 374, 489, 607, 1880, 1904, 2706 |
| SduI | GDGCHC | 3 cut(s) | 863, 871, 1952 |
| SexAI | ACCWGGT | 1 cut(s) | 372 |
| SfaNI | GCATC | 7 cut(s) | 513, 654, 1071, 1448, 2093, 2733, 2907 |
| SfcI | CTRYAG | 4 cut(s) | 2081, 2639, 2716, 2844 |
| SinI | GGWCC | 3 cut(s) | 404, 1391, 1932 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 227 |
| SmlI | CTYRAG | 2 cut(s) | 583, 2580 |
| SmoI | CTYRAG | 2 cut(s) | 583, 2580 |
| SphI | GCATGC | 2 cut(s) | 2028, 2077 |
| SsiI | CCGC | 7 cut(s) | 309, 433, 1285, 2066, 2078, 2106, 2722 |
| SspI | AATATT | 3 cut(s) | 671, 955, 1275 |
| SspMI | CTAG | 4 cut(s) | 503, 845, 1624, 1973 |
| SstI | GAGCTC | 1 cut(s) | 1952 |
| StyD4I | CCNGG | 6 cut(s) | 372, 487, 605, 1878, 1902, 2704 |
| StyI | CCWWGG | 2 cut(s) | 400, 1972 |
| TaiI | ACGT | 3 cut(s) | 28, 2529, 2831 |
| TaqI | TCGA | 5 cut(s) | 366, 1245, 1350, 2165, 2952 |
| TatI | WGTACW | 1 cut(s) | 2884 |
| TauI | GCSGC | 3 cut(s) | 2068, 2080, 2725 |
| TfiI | GAWTC | 8 cut(s) | 180, 204, 286, 942, 1247, 1291, 2416, 2949 |
| TseFI | GTSAC | 6 cut(s) | 34, 126, 508, 1561, 1816, 2781 |
| TseI | GCWGC | 8 cut(s) | 214, 658, 1602, 1627, 2080, 2542, 2641, 2715 |
| Tsp45I | GTSAC | 6 cut(s) | 34, 126, 508, 1561, 1816, 2781 |
| TspGWI | ACGGA | 3 cut(s) | 103, 579, 877 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2020 |
| Vha464I | CTTAAG | 1 cut(s) | 2580 |
| VneI | GTGCAC | 2 cut(s) | 859, 867 |
| VpaK11BI | GGWCC | 3 cut(s) | 404, 1391, 1932 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1386 |
| XapI | RAATTY | 3 cut(s) | 143, 615, 1398 |
| XceI | RCATGY | 3 cut(s) | 832, 2028, 2077 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2661 |
| XmaJI | CCTAGG | 1 cut(s) | 1972 |
| XmiI | GTMKAC | 1 cut(s) | 960 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1201, 2471 |
| XspI | CTAG | 4 cut(s) | 503, 845, 1624, 1973 |
| ZraI | GACGTC | 1 cut(s) | 2829 |