AT3G09390

Metallothionein-like protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
2889406 .. 2890574
1169 bp
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UTR
Exon/CDS
Intron
AT3G09390.1

Sequence Viewer

Length: 246 bp
ATGTCTTGCTGTGGAGGAAACTGCGGATGTGGATCTGGCTGCAAGTGCGGCAACGGTTGTGGAGGTTGCAAAATGTACCCTGACTTGGGATTCTCCGGCGAGACAACCACAACTGAGACTTTTGTCTTGGGCGTTGCACCGGCGATGAAGAATCAGTACGAGGCTTCAGGGGAGAGTAACAACGCTGAGAACGATGCTTGCAAGTGTGGATCTGACTGCAAGTGTGATCCTTGCACCTGCAAGTGA

Protein Analysis

81

Amino Acids

8.16

Weight (kDa)

4.61

Isoelectric Point (pI)

42.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallothio_2 PF01439 1 - 80 1.9e-30 Metallothionein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 24, 48
AclWI GGATC 3 cut(s) 40, 217, 221
AcuI CTGAAG 1 cut(s) 150
AfaI GTAC 2 cut(s) 77, 158
AfiI CCNNNNNNNGG 2 cut(s) 85, 86
Alw26I GTCTC 2 cut(s) 95, 110
AlwI GGATC 3 cut(s) 40, 217, 221
ApeKI GCWGC 1 cut(s) 39
BarI GAAGNNNNNNTAC 2 cut(s) 140, 172
BbvI GCAGC 1 cut(s) 26
BcoDI GTCTC 2 cut(s) 95, 110
BisI GCNGC 2 cut(s) 40, 49
BlsI GCNGC 2 cut(s) 41, 50
BmsI GCATC 1 cut(s) 184
BoxI GACNNNNGTC 1 cut(s) 122
BsaBI GATNNNNATC 1 cut(s) 31
Bsc4I CCNNNNNNNGG 2 cut(s) 85, 86
Bse118I RCCGGY 1 cut(s) 139
Bse8I GATNNNNATC 1 cut(s) 31
BseGI GGATG 1 cut(s) 32
BseJI GATNNNNATC 1 cut(s) 31
BseLI CCNNNNNNNGG 2 cut(s) 85, 86
BseMII CTCAG 2 cut(s) 105, 177
BseXI GCAGC 1 cut(s) 26
BsiSI CCGG 2 cut(s) 96, 140
BslI CCNNNNNNNGG 2 cut(s) 85, 86
BsmAI GTCTC 2 cut(s) 95, 110
Bsp143I GATC 3 cut(s) 32, 209, 226
BspACI CCGC 2 cut(s) 24, 48
BspCNI CTCAG 2 cut(s) 106, 178
BspPI GGATC 3 cut(s) 40, 217, 221
BsrFI RCCGGY 1 cut(s) 139
BssAI RCCGGY 1 cut(s) 139
BssMI GATC 3 cut(s) 32, 209, 226
Bst4CI ACNGT 1 cut(s) 56
BstC8I GCNNGC 1 cut(s) 199
BstDEI CTNAG 2 cut(s) 114, 186
BstF5I GGATG 1 cut(s) 32
BstKTI GATC 3 cut(s) 35, 212, 229
BstMAI GTCTC 2 cut(s) 95, 110
BstMBI GATC 3 cut(s) 32, 209, 226
BstMWI GCNNNNNNNGC 2 cut(s) 45, 48
BstPAI GACNNNNGTC 1 cut(s) 122
BstV1I GCAGC 1 cut(s) 26
BstX2I RGATCY 2 cut(s) 32, 209
BstYI RGATCY 2 cut(s) 32, 209
BtgZI GCGATG 1 cut(s) 158
BtsCI GGATG 1 cut(s) 32
Cac8I GCNNGC 1 cut(s) 199
Cfr10I RCCGGY 1 cut(s) 139
Csp6I GTAC 2 cut(s) 76, 157
CspCI CAANNNNNGTGG 2 cut(s) 40, 75
CviJI RGCY 2 cut(s) 39, 164
CviKI_1 RGCY 2 cut(s) 39, 164
CviQI GTAC 2 cut(s) 76, 157
DdeI CTNAG 2 cut(s) 114, 186
DpnI GATC 3 cut(s) 34, 211, 228
DpnII GATC 3 cut(s) 32, 209, 226
Eco57I CTGAAG 1 cut(s) 150
Fnu4HI GCNGC 2 cut(s) 40, 49
FokI GGATG 1 cut(s) 39
Fsp4HI GCNGC 2 cut(s) 40, 49
GluI GCNGC 2 cut(s) 40, 49
HapII CCGG 2 cut(s) 96, 140
HinfI GANTC 2 cut(s) 90, 151
HpaII CCGG 2 cut(s) 96, 140
Hpy188I TCNGA 1 cut(s) 214
HpyCH4III ACNGT 1 cut(s) 56
HpyCH4V TGCA 7 cut(s) 42, 69, 137, 201, 219, 234, 240
HpyF10VI GCNNNNNNNGC 2 cut(s) 45, 48
HpyF3I CTNAG 2 cut(s) 114, 186
Kzo9I GATC 3 cut(s) 32, 209, 226
LpnPI CCDG 5 cut(s) 21, 93, 109, 153, 153
Lsp1109I GCAGC 1 cut(s) 26
LweI GCATC 1 cut(s) 184
MaeIII GTNAC 1 cut(s) 176
MalI GATC 3 cut(s) 34, 211, 228
MboI GATC 3 cut(s) 32, 209, 226
MboII GAAGA 1 cut(s) 160
MflI RGATCY 2 cut(s) 32, 209
MnlI CCTC 3 cut(s) 8, 56, 154
MspI CCGG 2 cut(s) 96, 140
MwoI GCNNNNNNNGC 2 cut(s) 45, 48
NdeII GATC 3 cut(s) 32, 209, 226
PcsI WCGNNNNNNNCGW 1 cut(s) 189
PfeI GAWTC 2 cut(s) 90, 151
PkrI GCNGC 2 cut(s) 41, 50
PshAI GACNNNNGTC 1 cut(s) 122
PsuI RGATCY 2 cut(s) 32, 209
RsaI GTAC 2 cut(s) 77, 158
RsaNI GTAC 2 cut(s) 76, 157
SatI GCNGC 2 cut(s) 40, 49
Sau3AI GATC 3 cut(s) 32, 209, 226
SetI ASST 2 cut(s) 67, 239
SfaNI GCATC 1 cut(s) 184
SgrAI CRCCGGYG 1 cut(s) 139
SsiI CCGC 2 cut(s) 24, 48
TaaI ACNGT 1 cut(s) 56
TauI GCSGC 1 cut(s) 51
TfiI GAWTC 2 cut(s) 90, 151
TseI GCWGC 1 cut(s) 39
TspDTI ATGAA 1 cut(s) 161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.