pycom11g09030

Metallothionein-like protein type 2

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
7181778 .. 7182325
548 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g09030.2

Sequence Viewer

Length: 228 bp
ATGTCTTGCAATTGTAGCTGTGGTAGCGACTGCAAGTGCGGCAGTGGCTGCAAATGTGGCATGTACCCTGACTTGAGTTACTCAGAGACCACTTCCACTGAGACTATCATTGCTGGGGTTGCACCAGCGAAGATGTTCTACGAGGGGTCTGAGATGAACTATGGAGCAGAGAACGACTGCAAGTGTGGCTCAAACTGCAGCTGCACCTCATGCGGGTGCCACAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

76

Amino Acids

7.8

Weight (kDa)

4.79

Isoelectric Point (pI)

66.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 216
AciI CCGC 2 cut(s) 39, 213
AfaI GTAC 1 cut(s) 65
AfiI CCNNNNNNNGG 1 cut(s) 213
AluBI AGCT 2 cut(s) 18, 201
AluI AGCT 2 cut(s) 18, 201
Alw26I GTCTC 2 cut(s) 80, 95
AlwNI CAGNNNCTG 1 cut(s) 48
ApeKI GCWGC 3 cut(s) 48, 198, 201
Asp700I GAANNNNTTC 1 cut(s) 134
BanI GGYRCC 1 cut(s) 216
BarI GAAGNNNNNNTAC 2 cut(s) 122, 154
BbvI GCAGC 3 cut(s) 35, 188, 210
BcoDI GTCTC 2 cut(s) 80, 95
BfmI CTRYAG 1 cut(s) 196
BisI GCNGC 4 cut(s) 40, 49, 199, 202
BlsI GCNGC 4 cut(s) 41, 50, 200, 203
BmiI GGNNCC 1 cut(s) 218
BpuEI CTTGAG 1 cut(s) 94
BsaI GGTCTC 1 cut(s) 80
Bsc4I CCNNNNNNNGG 1 cut(s) 213
Bse3DI GCAATG 1 cut(s) 108
BseLI CCNNNNNNNGG 1 cut(s) 213
BseMI GCAATG 1 cut(s) 108
BseMII CTCAG 3 cut(s) 90, 96, 141
BseXI GCAGC 3 cut(s) 35, 188, 210
BseYI CCCAGC 1 cut(s) 113
BsgI GTGCAG 1 cut(s) 187
BshNI GGYRCC 1 cut(s) 216
BslI CCNNNNNNNGG 1 cut(s) 213
BsmAI GTCTC 2 cut(s) 80, 95
Bso31I GGTCTC 1 cut(s) 80
BspACI CCGC 2 cut(s) 39, 213
BspCNI CTCAG 3 cut(s) 91, 95, 142
BspLI GGNNCC 1 cut(s) 218
BspMAI CTGCAG 1 cut(s) 200
BspT107I GGYRCC 1 cut(s) 216
BspTNI GGTCTC 1 cut(s) 80
BsrDI GCAATG 1 cut(s) 108
BstAPI GCANNNNNTGC 2 cut(s) 48, 210
BstDEI CTNAG 3 cut(s) 82, 99, 150
BstMAI GTCTC 2 cut(s) 80, 95
BstNSI RCATGY 1 cut(s) 64
BstSFI CTRYAG 1 cut(s) 196
BstV1I GCAGC 3 cut(s) 35, 188, 210
BtsI GCAGTG 1 cut(s) 49
BtsIMutI CAGTG 2 cut(s) 49, 96
CaiI CAGNNNCTG 1 cut(s) 48
Csp6I GTAC 1 cut(s) 64
CviAII CATG 2 cut(s) 61, 210
CviJI RGCY 4 cut(s) 18, 48, 189, 201
CviKI_1 RGCY 4 cut(s) 18, 48, 189, 201
CviQI GTAC 1 cut(s) 64
DdeI CTNAG 3 cut(s) 82, 99, 150
Eco31I GGTCTC 1 cut(s) 80
FaeI CATG 2 cut(s) 64, 213
FaiI YATR 3 cut(s) 62, 162, 211
FatI CATG 2 cut(s) 60, 209
FauI CCCGC 1 cut(s) 206
Fnu4HI GCNGC 4 cut(s) 40, 49, 199, 202
Fsp4HI GCNGC 4 cut(s) 40, 49, 199, 202
GluI GCNGC 4 cut(s) 40, 49, 199, 202
GsaI CCCAGC 1 cut(s) 117
Hin1II CATG 2 cut(s) 64, 213
Hpy188I TCNGA 2 cut(s) 85, 151
HpyCH4V TGCA 7 cut(s) 9, 33, 51, 122, 180, 198, 204
HpyF3I CTNAG 3 cut(s) 82, 99, 150
Hsp92II CATG 2 cut(s) 64, 213
LmnI GCTCC 1 cut(s) 164
LpnPI CCDG 3 cut(s) 81, 99, 138
Lsp1109I GCAGC 3 cut(s) 35, 188, 210
MaeIII GTNAC 1 cut(s) 77
MboII GAAGA 1 cut(s) 142
MfeI CAATTG 1 cut(s) 10
MluCI AATT 1 cut(s) 10
MnlI CCTC 2 cut(s) 136, 217
MroXI GAANNNNTTC 1 cut(s) 134
MslI CAYNNNNRTG 1 cut(s) 214
MspA1I CMGCKG 1 cut(s) 201
MunI CAATTG 1 cut(s) 10
NlaIII CATG 2 cut(s) 64, 213
NlaIV GGNNCC 1 cut(s) 218
NspI RCATGY 1 cut(s) 64
PdmI GAANNNNTTC 1 cut(s) 134
PkrI GCNGC 4 cut(s) 41, 50, 200, 203
PspFI CCCAGC 1 cut(s) 113
PspN4I GGNNCC 1 cut(s) 218
PstI CTGCAG 1 cut(s) 200
PstNI CAGNNNCTG 1 cut(s) 48
PvuII CAGCTG 1 cut(s) 201
RsaI GTAC 1 cut(s) 65
RsaNI GTAC 1 cut(s) 64
RseI CAYNNNNRTG 1 cut(s) 214
SatI GCNGC 4 cut(s) 40, 49, 199, 202
SetI ASST 3 cut(s) 20, 203, 209
SfcI CTRYAG 1 cut(s) 196
SmiMI CAYNNNNRTG 1 cut(s) 214
SmlI CTYRAG 1 cut(s) 73
SmoI CTYRAG 1 cut(s) 73
Sse9I AATT 1 cut(s) 10
SsiI CCGC 2 cut(s) 39, 213
TasI AATT 1 cut(s) 10
TauI GCSGC 1 cut(s) 42
TscAI CASTG 2 cut(s) 49, 103
TseI GCWGC 3 cut(s) 48, 198, 201
TspDTI ATGAA 1 cut(s) 170
TspRI CASTG 2 cut(s) 49, 103
XceI RCATGY 1 cut(s) 64
XmnI GAANNNNTTC 1 cut(s) 134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.