Prupe.6G255100_v2.0.a1

metallothionein-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000858
Physical Location & Seq
Forward (+)
24811661 .. 24812655
995 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G255100.1

Sequence Viewer

Length: 243 bp
ATGTCGTCGTGCTGTGGAGGCAAATGTGGTTGCGGGGCTGGCTGCAAGTGCGGCAGCGGCTGTGGAGGGTGCGGGATGTACCCTGATATTTCCATGGAACAGAGCACCACAACTGAGACCCTTATAATGGGGGTTGCACCTCAAACCTCTCATTTTGAGGCTTCTGAGATGGGTGTTGTTGCTGAGAATGGATGCAAGTGTGGAGACAACTGCACCTGCAACCCCTGCAAGTGTGGAAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallothio_2

Protein Analysis

81

Amino Acids

7.97

Weight (kDa)

5.09

Isoelectric Point (pI)

42.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 125
AarI CACCTGC 1 cut(s) 224
Acc36I ACCTGC 1 cut(s) 224
AciI CCGC 4 cut(s) 33, 51, 57, 72
AfaI GTAC 1 cut(s) 80
AfiI CCNNNNNNNGG 1 cut(s) 127
Alw21I GWGCWC 1 cut(s) 107
Alw26I GTCTC 2 cut(s) 110, 198
AlwNI CAGNNNCTG 1 cut(s) 60
ApeKI GCWGC 2 cut(s) 42, 54
Bbv12I GWGCWC 1 cut(s) 107
BbvI GCAGC 2 cut(s) 29, 66
BccI CCATC 1 cut(s) 163
BcoDI GTCTC 2 cut(s) 110, 198
BfuAI ACCTGC 1 cut(s) 224
BisI GCNGC 4 cut(s) 43, 52, 55, 58
BlsI GCNGC 4 cut(s) 44, 53, 56, 59
BmsI GCATC 1 cut(s) 182
BsaI GGTCTC 1 cut(s) 110
BsaJI CCNNGG 1 cut(s) 93
Bsc4I CCNNNNNNNGG 1 cut(s) 127
BseDI CCNNGG 1 cut(s) 93
BseGI GGATG 2 cut(s) 81, 197
BseLI CCNNNNNNNGG 1 cut(s) 127
BseMII CTCAG 3 cut(s) 105, 156, 174
BseXI GCAGC 2 cut(s) 29, 66
BsgI GTGCAG 1 cut(s) 196
BsiHKAI GWGCWC 1 cut(s) 107
BslI CCNNNNNNNGG 1 cut(s) 127
BsmAI GTCTC 2 cut(s) 110, 198
Bso31I GGTCTC 1 cut(s) 110
Bsp1286I GDGCHC 1 cut(s) 107
Bsp19I CCATGG 1 cut(s) 93
BspACI CCGC 4 cut(s) 33, 51, 57, 72
BspCNI CTCAG 3 cut(s) 106, 157, 175
BspMI ACCTGC 1 cut(s) 224
BspTNI GGTCTC 1 cut(s) 110
BssECI CCNNGG 1 cut(s) 93
BssT1I CCWWGG 1 cut(s) 93
BstAPI GCANNNNNTGC 1 cut(s) 225
BstC8I GCNNGC 1 cut(s) 40
BstDEI CTNAG 3 cut(s) 114, 165, 183
BstDSI CCRYGG 1 cut(s) 93
BstF5I GGATG 2 cut(s) 81, 197
BstMAI GTCTC 2 cut(s) 110, 198
BstMWI GCNNNNNNNGC 6 cut(s) 18, 39, 48, 51, 57, 225
BstV1I GCAGC 2 cut(s) 29, 66
BtgI CCRYGG 1 cut(s) 93
BtsCI GGATG 2 cut(s) 81, 197
BveI ACCTGC 1 cut(s) 224
Cac8I GCNNGC 1 cut(s) 40
CaiI CAGNNNCTG 1 cut(s) 60
Csp6I GTAC 1 cut(s) 79
CviAII CATG 1 cut(s) 94
CviJI RGCY 4 cut(s) 38, 42, 60, 161
CviKI_1 RGCY 4 cut(s) 38, 42, 60, 161
CviQI GTAC 1 cut(s) 79
DdeI CTNAG 3 cut(s) 114, 165, 183
Eco130I CCWWGG 1 cut(s) 93
Eco31I GGTCTC 1 cut(s) 110
EcoT14I CCWWGG 1 cut(s) 93
ErhI CCWWGG 1 cut(s) 93
FaeI CATG 1 cut(s) 97
FaiI YATR 2 cut(s) 95, 125
FatI CATG 1 cut(s) 93
FauI CCCGC 2 cut(s) 26, 65
Fnu4HI GCNGC 4 cut(s) 43, 52, 55, 58
FokI GGATG 2 cut(s) 88, 204
Fsp4HI GCNGC 4 cut(s) 43, 52, 55, 58
GluI GCNGC 4 cut(s) 43, 52, 55, 58
Hin1II CATG 1 cut(s) 97
Hpy188I TCNGA 1 cut(s) 166
Hpy99I CGWCG 1 cut(s) 10
HpyCH4V TGCA 6 cut(s) 45, 137, 195, 213, 219, 228
HpyF10VI GCNNNNNNNGC 6 cut(s) 18, 39, 48, 51, 57, 225
HpyF3I CTNAG 3 cut(s) 114, 165, 183
Hsp92II CATG 1 cut(s) 97
LpnPI CCDG 4 cut(s) 24, 96, 229, 238
Lsp1109I GCAGC 2 cut(s) 29, 66
LweI GCATC 1 cut(s) 182
MhlI GDGCHC 1 cut(s) 107
MnlI CCTC 5 cut(s) 11, 59, 150, 151, 157
MspA1I CMGCKG 1 cut(s) 57
MwoI GCNNNNNNNGC 6 cut(s) 18, 39, 48, 51, 57, 225
NcoI CCATGG 1 cut(s) 93
NlaIII CATG 1 cut(s) 97
PaqCI CACCTGC 1 cut(s) 224
PkrI GCNGC 4 cut(s) 44, 53, 56, 59
PsiI TTATAA 1 cut(s) 125
PstNI CAGNNNCTG 1 cut(s) 60
RsaI GTAC 1 cut(s) 80
RsaNI GTAC 1 cut(s) 79
SatI GCNGC 4 cut(s) 43, 52, 55, 58
SduI GDGCHC 1 cut(s) 107
SetI ASST 3 cut(s) 142, 149, 218
SfaNI GCATC 1 cut(s) 182
SsiI CCGC 4 cut(s) 33, 51, 57, 72
StyI CCWWGG 1 cut(s) 93
TauI GCSGC 2 cut(s) 54, 60
TseI GCWGC 2 cut(s) 42, 54
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.