Prupe.6G077900_v2.0.a1

Metallothionein-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000858
Physical Location & Seq
Reverse (-)
5302683 .. 5303300
618 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G077900.1

Sequence Viewer

Length: 225 bp
ATGTCTTGCAGCTGTGGCTCAAACTGCTCCTGCGGCAGTGACTGCAAATGTGGAAAAAAATACCCTGACCTTGAATACTCAGAGACCACTTCTACTCAGACCATCATTGCTGGGGTTGCACCTGTGAAGATGTACTATGAGGGTTCTGAGATGAGCTATGGAGCAGAGAATGACTGCAAGTGTGGCTCAAGCTGCAGCTGCAGCTCATGCAGCTGCAACAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallothio_2

Protein Analysis

75

Amino Acids

7.75

Weight (kDa)

4.81

Isoelectric Point (pI)

75.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 33
AfaI GTAC 1 cut(s) 134
AgsI TTSAA 1 cut(s) 74
AluBI AGCT 6 cut(s) 12, 156, 192, 198, 204, 213
AluI AGCT 6 cut(s) 12, 156, 192, 198, 204, 213
Alw26I GTCTC 1 cut(s) 77
AlwNI CAGNNNCTG 1 cut(s) 42
ApeKI GCWGC 7 cut(s) 9, 192, 195, 198, 201, 210, 213
BbvI GCAGC 6 cut(s) 21, 179, 185, 200, 207, 213
BccI CCATC 1 cut(s) 110
BcoDI GTCTC 1 cut(s) 77
BfmI CTRYAG 2 cut(s) 193, 199
BisI GCNGC 8 cut(s) 10, 34, 193, 196, 199, 202, 211, 214
BlsI GCNGC 8 cut(s) 11, 35, 194, 197, 200, 203, 212, 215
BpuEI CTTGAG 1 cut(s) 172
BsaI GGTCTC 1 cut(s) 77
Bse3DI GCAATG 1 cut(s) 105
BseMI GCAATG 1 cut(s) 105
BseMII CTCAG 3 cut(s) 93, 110, 138
BseXI GCAGC 6 cut(s) 21, 179, 185, 200, 207, 213
BseYI CCCAGC 1 cut(s) 110
BsmAI GTCTC 1 cut(s) 77
Bso31I GGTCTC 1 cut(s) 77
BspACI CCGC 1 cut(s) 33
BspCNI CTCAG 3 cut(s) 92, 109, 139
BspMAI CTGCAG 2 cut(s) 197, 203
BspTNI GGTCTC 1 cut(s) 77
BsrDI GCAATG 1 cut(s) 105
BstAPI GCANNNNNTGC 2 cut(s) 42, 207
BstDEI CTNAG 3 cut(s) 79, 96, 147
BstMAI GTCTC 1 cut(s) 77
BstSFI CTRYAG 2 cut(s) 193, 199
BstV1I GCAGC 6 cut(s) 21, 179, 185, 200, 207, 213
BtsI GCAGTG 1 cut(s) 43
BtsIMutI CAGTG 1 cut(s) 43
CaiI CAGNNNCTG 1 cut(s) 42
Csp6I GTAC 1 cut(s) 133
CviAII CATG 1 cut(s) 207
CviJI RGCY 8 cut(s) 12, 18, 156, 186, 192, 198, 204, 213
CviKI_1 RGCY 8 cut(s) 12, 18, 156, 186, 192, 198, 204, 213
CviQI GTAC 1 cut(s) 133
DdeI CTNAG 3 cut(s) 79, 96, 147
Eco31I GGTCTC 1 cut(s) 77
FaeI CATG 1 cut(s) 210
FaiI YATR 3 cut(s) 138, 159, 208
FatI CATG 1 cut(s) 206
Fnu4HI GCNGC 8 cut(s) 10, 34, 193, 196, 199, 202, 211, 214
Fsp4HI GCNGC 8 cut(s) 10, 34, 193, 196, 199, 202, 211, 214
GluI GCNGC 8 cut(s) 10, 34, 193, 196, 199, 202, 211, 214
GsaI CCCAGC 1 cut(s) 114
Hin1II CATG 1 cut(s) 210
Hpy188I TCNGA 3 cut(s) 82, 99, 148
HpyCH4V TGCA 8 cut(s) 9, 45, 119, 177, 195, 201, 210, 216
HpyF3I CTNAG 3 cut(s) 79, 96, 147
Hsp92II CATG 1 cut(s) 210
LmnI GCTCC 2 cut(s) 32, 161
LpnPI CCDG 4 cut(s) 43, 78, 96, 135
Lsp1109I GCAGC 6 cut(s) 21, 179, 185, 200, 207, 213
MaeIII GTNAC 1 cut(s) 38
MboII GAAGA 1 cut(s) 139
MnlI CCTC 1 cut(s) 133
MspA1I CMGCKG 3 cut(s) 12, 198, 213
NlaIII CATG 1 cut(s) 210
NmuCI GTSAC 1 cut(s) 38
PkrI GCNGC 8 cut(s) 11, 35, 194, 197, 200, 203, 212, 215
PspFI CCCAGC 1 cut(s) 110
PstI CTGCAG 2 cut(s) 197, 203
PstNI CAGNNNCTG 1 cut(s) 42
PvuII CAGCTG 3 cut(s) 12, 198, 213
RsaI GTAC 1 cut(s) 134
RsaNI GTAC 1 cut(s) 133
SatI GCNGC 8 cut(s) 10, 34, 193, 196, 199, 202, 211, 214
SetI ASST 8 cut(s) 14, 72, 124, 158, 194, 200, 206, 215
SfcI CTRYAG 2 cut(s) 193, 199
SgeI CNNG 9 cut(s) 18, 42, 77, 83, 123, 134, 190, 201, 219
SmlI CTYRAG 1 cut(s) 187
SmoI CTYRAG 1 cut(s) 187
SsiI CCGC 1 cut(s) 33
TatI WGTACW 1 cut(s) 132
TauI GCSGC 1 cut(s) 36
TscAI CASTG 1 cut(s) 43
TseFI GTSAC 1 cut(s) 38
TseI GCWGC 7 cut(s) 9, 192, 195, 198, 201, 210, 213
Tsp45I GTSAC 1 cut(s) 38
TspRI CASTG 1 cut(s) 43
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.