pycom11g09020

Metallothionein-like protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
7175544 .. 7176013
470 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g09020.1

Sequence Viewer

Length: 237 bp
ATGTCTGGTTGCGATAATCCGAACTGTAGCTGTGGCTCCAACTGCTCCTGTGGCAAAGGCTGCAACTGTGCGTACCCTGATTTGGGTTACTTAGAGACTGCTTCTACTGAGACCATCATTACTGGGGTTGCACCAGTGAAGATGTTCTATGAGGGGTCTGAGAGGAACTATGGAGCAGAGAATGGCTGCAAATACGGAGCAAACTGCCGCTACAGTTCATGCGGCTGGCAAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

79

Amino Acids

8.28

Weight (kDa)

5.14

Isoelectric Point (pI)

40.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Metallothio_2 PF01439 1 - 74 1.1e-15 Metallothionein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 208, 222
AfaI GTAC 1 cut(s) 74
AfiI CCNNNNNNNGG 2 cut(s) 82, 83
AluBI AGCT 1 cut(s) 30
AluI AGCT 1 cut(s) 30
Alw26I GTCTC 2 cut(s) 89, 104
ApeKI GCWGC 2 cut(s) 60, 186
Asp700I GAANNNNTTC 1 cut(s) 143
BbvI GCAGC 2 cut(s) 47, 173
BccI CCATC 1 cut(s) 122
BcoDI GTCTC 2 cut(s) 89, 104
BfmI CTRYAG 2 cut(s) 25, 211
BisI GCNGC 4 cut(s) 61, 187, 208, 223
BlsI GCNGC 4 cut(s) 62, 188, 209, 224
BmiI GGNNCC 1 cut(s) 37
BmrI ACTGGG 1 cut(s) 132
BmuI ACTGGG 1 cut(s) 132
BsaI GGTCTC 1 cut(s) 104
Bsc4I CCNNNNNNNGG 2 cut(s) 82, 83
Bse1I ACTGG 2 cut(s) 127, 134
BseLI CCNNNNNNNGG 2 cut(s) 82, 83
BseMII CTCAG 2 cut(s) 99, 150
BseNI ACTGG 2 cut(s) 127, 134
BseXI GCAGC 2 cut(s) 47, 173
BslI CCNNNNNNNGG 2 cut(s) 82, 83
BsmAI GTCTC 2 cut(s) 89, 104
Bso31I GGTCTC 1 cut(s) 104
BspACI CCGC 2 cut(s) 208, 222
BspCNI CTCAG 2 cut(s) 100, 151
BspLI GGNNCC 1 cut(s) 37
BspTNI GGTCTC 1 cut(s) 104
BsrI ACTGG 2 cut(s) 127, 134
Bst4CI ACNGT 3 cut(s) 26, 68, 215
BstAPI GCANNNNNTGC 1 cut(s) 60
BstC8I GCNNGC 1 cut(s) 227
BstDEI CTNAG 3 cut(s) 91, 108, 159
BstMAI GTCTC 2 cut(s) 89, 104
BstMWI GCNNNNNNNGC 3 cut(s) 42, 51, 60
BstSFI CTRYAG 2 cut(s) 25, 211
BstV1I GCAGC 2 cut(s) 47, 173
BtsIMutI CAGTG 1 cut(s) 141
Cac8I GCNNGC 1 cut(s) 227
Csp6I GTAC 1 cut(s) 73
CviAII CATG 1 cut(s) 219
CviJI RGCY 5 cut(s) 30, 36, 60, 186, 225
CviKI_1 RGCY 5 cut(s) 30, 36, 60, 186, 225
CviQI GTAC 1 cut(s) 73
DdeI CTNAG 3 cut(s) 91, 108, 159
Eco31I GGTCTC 1 cut(s) 104
FaeI CATG 1 cut(s) 222
FaiI YATR 3 cut(s) 150, 171, 220
FatI CATG 1 cut(s) 218
Fnu4HI GCNGC 4 cut(s) 61, 187, 208, 223
Fsp4HI GCNGC 4 cut(s) 61, 187, 208, 223
GluI GCNGC 4 cut(s) 61, 187, 208, 223
Hin1II CATG 1 cut(s) 222
Hpy188I TCNGA 2 cut(s) 21, 160
HpyCH4III ACNGT 3 cut(s) 26, 68, 215
HpyCH4V TGCA 3 cut(s) 63, 131, 189
HpyF10VI GCNNNNNNNGC 3 cut(s) 42, 51, 60
HpyF3I CTNAG 3 cut(s) 91, 108, 159
Hsp92II CATG 1 cut(s) 222
LmnI GCTCC 4 cut(s) 41, 50, 173, 197
LpnPI CCDG 5 cut(s) 61, 90, 108, 147, 211
Lsp1109I GCAGC 2 cut(s) 47, 173
MaeIII GTNAC 1 cut(s) 86
MboII GAAGA 1 cut(s) 151
MmeI TCCRAC 1 cut(s) 63
MnlI CCTC 2 cut(s) 145, 156
MroXI GAANNNNTTC 1 cut(s) 143
MwoI GCNNNNNNNGC 3 cut(s) 42, 51, 60
NlaIII CATG 1 cut(s) 222
NlaIV GGNNCC 1 cut(s) 37
PdmI GAANNNNTTC 1 cut(s) 143
PkrI GCNGC 4 cut(s) 62, 188, 209, 224
PspN4I GGNNCC 1 cut(s) 37
RsaI GTAC 1 cut(s) 74
RsaNI GTAC 1 cut(s) 73
SatI GCNGC 4 cut(s) 61, 187, 208, 223
SetI ASST 1 cut(s) 32
SfcI CTRYAG 2 cut(s) 25, 211
SgeI CNNG 6 cut(s) 18, 60, 89, 135, 146, 231
SsiI CCGC 2 cut(s) 208, 222
TaaI ACNGT 3 cut(s) 26, 68, 215
TauI GCSGC 2 cut(s) 210, 225
TscAI CASTG 1 cut(s) 141
TseI GCWGC 2 cut(s) 60, 186
TspDTI ATGAA 1 cut(s) 207
TspGWI ACGGA 1 cut(s) 210
TspRI CASTG 1 cut(s) 141
XmnI GAANNNNTTC 1 cut(s) 143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.