pycom03g07620

Metallothionein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
OG0000858
Physical Location & Seq
Reverse (-)
6052618 .. 6053262
645 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g07620.2

Sequence Viewer

Length: 228 bp
ATGTCTTCCAGTTGTAGCTGTGGTAGTGACTGCAAGTGCGGCAGTGGCTGCAAATGTGGGATGCACGTGGACTTGGGTTACTCAGAGACCACTTCCATTGATACAATCATTGCTGGGGTTGCACCAATGAAGATGTCCTTTGAGGGGTCTGAGATGAACTATGGAGCAGAGAATGACTGCAAATGTGGCTCAAACTGCAGCTGCAGCTCATGCAGCTGCAACAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallothio_2

Protein Analysis

76

Amino Acids

7.68

Weight (kDa)

4.75

Isoelectric Point (pI)

65.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 39
AcvI CACGTG 1 cut(s) 67
AfiI CCNNNNNNNGG 1 cut(s) 144
AluBI AGCT 4 cut(s) 18, 201, 207, 216
AluI AGCT 4 cut(s) 18, 201, 207, 216
Alw26I GTCTC 1 cut(s) 80
AlwNI CAGNNNCTG 1 cut(s) 48
ApeKI GCWGC 6 cut(s) 48, 198, 201, 204, 213, 216
BbrPI CACGTG 1 cut(s) 67
BbvI GCAGC 5 cut(s) 35, 188, 203, 210, 216
BcoDI GTCTC 1 cut(s) 80
BfmI CTRYAG 2 cut(s) 196, 202
BisI GCNGC 7 cut(s) 40, 49, 199, 202, 205, 214, 217
BlsI GCNGC 7 cut(s) 41, 50, 200, 203, 206, 215, 218
BmsI GCATC 1 cut(s) 51
BsaAI YACGTR 1 cut(s) 67
BsaI GGTCTC 1 cut(s) 80
Bsc4I CCNNNNNNNGG 1 cut(s) 144
Bse1I ACTGG 1 cut(s) 9
Bse3DI GCAATG 1 cut(s) 108
BseGI GGATG 1 cut(s) 66
BseLI CCNNNNNNNGG 1 cut(s) 144
BseMI GCAATG 1 cut(s) 108
BseMII CTCAG 2 cut(s) 96, 141
BseNI ACTGG 1 cut(s) 9
BseXI GCAGC 5 cut(s) 35, 188, 203, 210, 216
BseYI CCCAGC 1 cut(s) 113
BslI CCNNNNNNNGG 1 cut(s) 144
BsmAI GTCTC 1 cut(s) 80
Bso31I GGTCTC 1 cut(s) 80
BspACI CCGC 1 cut(s) 39
BspCNI CTCAG 2 cut(s) 95, 142
BspMAI CTGCAG 2 cut(s) 200, 206
BspTNI GGTCTC 1 cut(s) 80
BsrDI GCAATG 1 cut(s) 108
BsrI ACTGG 1 cut(s) 9
BstAPI GCANNNNNTGC 2 cut(s) 48, 210
BstBAI YACGTR 1 cut(s) 67
BstDEI CTNAG 2 cut(s) 82, 150
BstF5I GGATG 1 cut(s) 66
BstMAI GTCTC 1 cut(s) 80
BstMWI GCNNNNNNNGC 9 cut(s) 39, 45, 48, 119, 186, 195, 204, 210, 213
BstSFI CTRYAG 2 cut(s) 196, 202
BstV1I GCAGC 5 cut(s) 35, 188, 203, 210, 216
BtsCI GGATG 1 cut(s) 66
BtsI GCAGTG 1 cut(s) 49
BtsIMutI CAGTG 1 cut(s) 49
CaiI CAGNNNCTG 1 cut(s) 48
CspCI CAANNNNNGTGG 2 cut(s) 79, 114
CviAII CATG 1 cut(s) 210
CviJI RGCY 6 cut(s) 18, 48, 189, 201, 207, 216
CviKI_1 RGCY 6 cut(s) 18, 48, 189, 201, 207, 216
DdeI CTNAG 2 cut(s) 82, 150
Eco31I GGTCTC 1 cut(s) 80
Eco72I CACGTG 1 cut(s) 67
FaeI CATG 1 cut(s) 213
FaiI YATR 2 cut(s) 162, 211
FalI AAGNNNNNCTT 2 cut(s) 122, 154
FatI CATG 1 cut(s) 209
Fnu4HI GCNGC 7 cut(s) 40, 49, 199, 202, 205, 214, 217
FokI GGATG 1 cut(s) 73
Fsp4HI GCNGC 7 cut(s) 40, 49, 199, 202, 205, 214, 217
GluI GCNGC 7 cut(s) 40, 49, 199, 202, 205, 214, 217
GsaI CCCAGC 1 cut(s) 117
Hin1II CATG 1 cut(s) 213
Hpy166II GTNNAC 1 cut(s) 70
Hpy188I TCNGA 2 cut(s) 85, 151
Hpy8I GTNNAC 1 cut(s) 70
HpyCH4IV ACGT 1 cut(s) 66
HpyCH4V TGCA 9 cut(s) 33, 51, 64, 122, 180, 198, 204, 213, 219
HpyF10VI GCNNNNNNNGC 9 cut(s) 39, 45, 48, 119, 186, 195, 204, 210, 213
HpyF3I CTNAG 2 cut(s) 82, 150
HpySE526I ACGT 1 cut(s) 66
Hsp92II CATG 1 cut(s) 213
LmnI GCTCC 1 cut(s) 164
LpnPI CCDG 2 cut(s) 22, 99
Lsp1109I GCAGC 5 cut(s) 35, 188, 203, 210, 216
LweI GCATC 1 cut(s) 51
MaeII ACGT 1 cut(s) 66
MaeIII GTNAC 2 cut(s) 26, 77
MboII GAAGA 1 cut(s) 142
MnlI CCTC 1 cut(s) 136
MspA1I CMGCKG 2 cut(s) 201, 216
MwoI GCNNNNNNNGC 9 cut(s) 39, 45, 48, 119, 186, 195, 204, 210, 213
NlaIII CATG 1 cut(s) 213
NmuCI GTSAC 1 cut(s) 26
PkrI GCNGC 7 cut(s) 41, 50, 200, 203, 206, 215, 218
PmaCI CACGTG 1 cut(s) 67
PmlI CACGTG 1 cut(s) 67
Ppu21I YACGTR 1 cut(s) 67
PspCI CACGTG 1 cut(s) 67
PspFI CCCAGC 1 cut(s) 113
PstI CTGCAG 2 cut(s) 200, 206
PstNI CAGNNNCTG 1 cut(s) 48
PvuII CAGCTG 2 cut(s) 201, 216
SatI GCNGC 7 cut(s) 40, 49, 199, 202, 205, 214, 217
SetI ASST 5 cut(s) 20, 69, 203, 209, 218
SfaNI GCATC 1 cut(s) 51
SfcI CTRYAG 2 cut(s) 196, 202
SgeI CNNG 7 cut(s) 21, 46, 77, 79, 85, 126, 222
SsiI CCGC 1 cut(s) 39
TaiI ACGT 1 cut(s) 69
TauI GCSGC 1 cut(s) 42
TscAI CASTG 1 cut(s) 49
TseFI GTSAC 1 cut(s) 26
TseI GCWGC 6 cut(s) 48, 198, 201, 204, 213, 216
Tsp45I GTSAC 1 cut(s) 26
TspDTI ATGAA 2 cut(s) 143, 170
TspRI CASTG 1 cut(s) 49
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.