pycom03g07690

Metallothionein-like protein type 2

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
6102898 .. 6103479
582 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g07690.2

Sequence Viewer

Length: 228 bp
ATGTCTTGCAATTGTAGCTGTGGCAGTGACTGCAAGTGCGGCAGTGGCTGCAAGTGTGGCATGTACCCTGACTTGAGCTACTCAGAGACCACTTCCACTGAAACTATCATTGCTGGAGTTGCACCTGTGAAAATGTTCTCTGAGGGGTCTGAGATGAGCTATGGAGCAGAGAATGACTGCAAGTGTGGCTCAAGCTGCAGCTGCAACTCATGTGGCTGCCATAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

76

Amino Acids

7.71

Weight (kDa)

4.79

Isoelectric Point (pI)

73.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 39
AfaI GTAC 1 cut(s) 65
AluBI AGCT 5 cut(s) 18, 78, 159, 195, 201
AluI AGCT 5 cut(s) 18, 78, 159, 195, 201
Alw26I GTCTC 1 cut(s) 80
AlwNI CAGNNNCTG 2 cut(s) 30, 48
ApeKI GCWGC 5 cut(s) 48, 195, 198, 201, 216
Asp700I GAANNNNTTC 1 cut(s) 134
BbvI GCAGC 5 cut(s) 35, 182, 188, 203, 210
BcoDI GTCTC 1 cut(s) 80
BfmI CTRYAG 1 cut(s) 196
BisI GCNGC 6 cut(s) 40, 49, 196, 199, 202, 217
BlsI GCNGC 6 cut(s) 41, 50, 197, 200, 203, 218
BpmI CTGGAG 1 cut(s) 135
BpuEI CTTGAG 2 cut(s) 94, 175
BsaI GGTCTC 1 cut(s) 80
Bse3DI GCAATG 1 cut(s) 108
BseMI GCAATG 1 cut(s) 108
BseMII CTCAG 3 cut(s) 96, 132, 141
BseXI GCAGC 5 cut(s) 35, 182, 188, 203, 210
BsmAI GTCTC 1 cut(s) 80
Bso31I GGTCTC 1 cut(s) 80
BspACI CCGC 1 cut(s) 39
BspCNI CTCAG 3 cut(s) 95, 133, 142
BspMAI CTGCAG 1 cut(s) 200
BspTNI GGTCTC 1 cut(s) 80
BsrDI GCAATG 1 cut(s) 108
BstAPI GCANNNNNTGC 2 cut(s) 30, 48
BstDEI CTNAG 3 cut(s) 82, 141, 150
BstMAI GTCTC 1 cut(s) 80
BstNSI RCATGY 1 cut(s) 64
BstSFI CTRYAG 1 cut(s) 196
BstV1I GCAGC 5 cut(s) 35, 182, 188, 203, 210
BtsI GCAGTG 2 cut(s) 31, 49
BtsIMutI CAGTG 3 cut(s) 31, 49, 96
CaiI CAGNNNCTG 2 cut(s) 30, 48
Csp6I GTAC 1 cut(s) 64
CspCI CAANNNNNGTGG 2 cut(s) 193, 228
CviAII CATG 2 cut(s) 61, 210
CviJI RGCY 8 cut(s) 18, 48, 78, 159, 189, 195, 201, 216
CviKI_1 RGCY 8 cut(s) 18, 48, 78, 159, 189, 195, 201, 216
CviQI GTAC 1 cut(s) 64
DdeI CTNAG 3 cut(s) 82, 141, 150
Eco31I GGTCTC 1 cut(s) 80
FaeI CATG 2 cut(s) 64, 213
FaiI YATR 4 cut(s) 62, 162, 211, 222
FatI CATG 2 cut(s) 60, 209
Fnu4HI GCNGC 6 cut(s) 40, 49, 196, 199, 202, 217
Fsp4HI GCNGC 6 cut(s) 40, 49, 196, 199, 202, 217
GluI GCNGC 6 cut(s) 40, 49, 196, 199, 202, 217
GsuI CTGGAG 1 cut(s) 135
Hin1II CATG 2 cut(s) 64, 213
Hpy188I TCNGA 3 cut(s) 85, 142, 151
HpyCH4V TGCA 7 cut(s) 9, 33, 51, 122, 180, 198, 204
HpyF3I CTNAG 3 cut(s) 82, 141, 150
Hsp92II CATG 2 cut(s) 64, 213
LmnI GCTCC 1 cut(s) 164
LpnPI CCDG 3 cut(s) 81, 99, 138
Lsp1109I GCAGC 5 cut(s) 35, 182, 188, 203, 210
MaeIII GTNAC 1 cut(s) 26
MfeI CAATTG 1 cut(s) 10
MluCI AATT 1 cut(s) 10
MnlI CCTC 1 cut(s) 136
MroXI GAANNNNTTC 1 cut(s) 134
MspA1I CMGCKG 1 cut(s) 201
MunI CAATTG 1 cut(s) 10
NlaIII CATG 2 cut(s) 64, 213
NmuCI GTSAC 1 cut(s) 26
NspI RCATGY 1 cut(s) 64
PdmI GAANNNNTTC 1 cut(s) 134
PkrI GCNGC 6 cut(s) 41, 50, 197, 200, 203, 218
PstI CTGCAG 1 cut(s) 200
PstNI CAGNNNCTG 2 cut(s) 30, 48
PvuII CAGCTG 1 cut(s) 201
RsaI GTAC 1 cut(s) 65
RsaNI GTAC 1 cut(s) 64
SatI GCNGC 6 cut(s) 40, 49, 196, 199, 202, 217
SetI ASST 6 cut(s) 20, 80, 127, 161, 197, 203
SfcI CTRYAG 1 cut(s) 196
SmlI CTYRAG 2 cut(s) 73, 190
SmoI CTYRAG 2 cut(s) 73, 190
Sse9I AATT 1 cut(s) 10
SsiI CCGC 1 cut(s) 39
TasI AATT 1 cut(s) 10
TauI GCSGC 1 cut(s) 42
TscAI CASTG 3 cut(s) 31, 49, 103
TseFI GTSAC 1 cut(s) 26
TseI GCWGC 5 cut(s) 48, 195, 198, 201, 216
Tsp45I GTSAC 1 cut(s) 26
TspRI CASTG 3 cut(s) 31, 49, 103
XceI RCATGY 1 cut(s) 64
XmnI GAANNNNTTC 1 cut(s) 134
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.