Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001126

Physical Location & Seq

Genomic Coordinates Forward (+)

30760298 .. 30766827

Gene Structure 6530 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g31750.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1926 bp

ATGCCGATGCGAATATTATACAACTCAAAATCTAGTGATTTTGCTAGCCATTTCGAAACTAACCCCATGAAGCGCGAAATAGGCAGACTAGTCACCAATGGGTTATACACAGAAGCCGTATCCCTCTACGCTCAACACCACTCCGCTTCTCTTCCCCCTAACAAATTCACATTCCCTCCTCTCCTCAAAGCCTGCGCCAACCTCCGATCACCTCCTCATACCCAAATGGCCCACGCCCACCTCCTCAAAACCGGGTTCTTCTCCGACGTCTACTCCTCCACAGCTCTCACCGACTCCTACATGAAGCTCAATCTAACGGACCATGCACTCCACGTGTTCGACGAAATGCCCCACCGAAACTTGGCTTCTATAAACGCCGTGATTTCCGGGCTGCTGCGTAACGGTCATTGCAGGGAGGCTTTGGCTGTGTTCAGGAGGGTTTGGGTTGGAGGTTTTGGAATTAATTCGGTTACTATAGCTAGTGTGTTTTCGGGGTGTGAGAATGCGAAGCAGGGGATGGGAATGCATTGCGCGGCGGTGAAGATTGGGGTTGAGGATGATGTTTATGTGTCGACAGCGGCGGTGAGTATGTATTCGAGCTGTGGGGAGGTGGAGTATGCTGCAAAGGTGTTTGAAGACATGCCGGTTAAGAATTTGGTGAGCTATAATGCGTTTATTACAGGGCTCTTGCGGAATGGGGCTGCGCGGGTGGTGTTGGATGTGTTTAAGAAGATGAGAGGATATGGAGGTGAGTATCTGAATGCAGTGACATTGGTTTTGGTTCTTGCAGCCTGCGGTAGTGATTTGTGTCTCAGATTTGGCAGGCAGGTTCATGGTTTGATGATGAAAATCGATAGGGGAATTGATGTTATGACTGGAACAGCGCTTGTGGATATGTATTCGAAATGTGGGTGTTGGCAGCTGGCGTACCAGGTTTTCGGAGAACTGGATGGAACCAGGAGCTTGTTTACTTGGAATGCCATGATTGCAGGAATGATGATGAATGCGCAGTGGGAGAGTGCAGTTGAGCTTTTCGAAAGGTTAGAATCTGAAGGGTTTAAGCCTGATTCAGTGACATGGAATTCGATGATCAGTGGGTTTTCGCAACTAGGGAAGGGGAGTGAAGCTTTCGAGTATTTCAAGAGGATGCAAGCGACTGGTATAACTCCGAGTTTGAAATCCTTCACAAGTGTTTTGCAAGCCTGTGCAGATTCATCTGCTCTGCAATGTGGACGAGAGATTCATGGGCATGCGATTAGGACTGATATAAGCAGTGATCTGTTTTTATCAACTGCTCTAATTGACATGTACATGAAATGTGGACAGCCTCCTTGGGCAAGAAGAGTTTTTGATTCGTTTCATGTGAAACCTGATGATGCTGCATTTTGGAACGCAATGATAGCAGGGTATGGAAGAAATGGAGAGAATGAGTGTGCGTTTCCAATCTTTGACCAGATGCTCGAAGAAAAAGTACAACCAAATGCAGCTACTTTCATTAGTCTTCTATCTATGTGCAGCCACAGTGGTTTAGTTGACAAAGGATGGCAAATCTTTAGGATGATGGATAGAGATTTTGGTATAAAACCAAATCCGAAACATTATGGCTGTATGATTGACCTTTTAGGTCGATCAGGCAGGTTCGATGAAGCCCTAGAACTAACACAAGAGTTATCAGAGCCTTCTGCATCAGTTTTTGCTTCTTTGCTAGGTGCTTGTGAGTGCCATTCAAATGTAGACCTGGGGACACAAATGGCTATAAAACTTTCAGAATTAGAGCCAGAGAACCCTATACCTTTTCTGATCCTGTCCAAGATATTTGCTGGGCTTGGCAGGTGGAAGGATGCAGAAATCAGTAGGAAAATGATGGATAATCAAAAGTCAAGAAAGGTCCCTGGCTTTAGTTTATTCAGATTGCATACAAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

642

Amino Acids

71.04

Weight (kDa)

6.83

Isoelectric Point (pI)

36.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	322 - 367	4.9e-12	PPR repeat family
PPR_long	PF17177	332 - 443	5.5e-08	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	344 - 404	1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	352 - 383	1.5e-06	PPR repeat
PPR_2	PF13041	355 - 403	1.4e-11	PPR repeat family
PPR	PF01535	358 - 387	1e-08	PPR repeat
PPR_2	PF13041	459 - 506	3.3e-10	PPR repeat family
PPR_3	PF13812	463 - 505	9.1e-06	Pentatricopeptide repeat domain
E_motif	PF20431	575 - 634	6.2e-11	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001126)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02750
fragaria_vesca	FvH4_4g31750 FvH4_4g31750 FvH4_4g31750
malus_domestica	MD16G1077500.v1.1
prunus_persica	Prupe.1G269600_v2.0.a1
pyrus_communis	pycom16g06680
rosa_chinensis	RchiOBHm_Chr3g0480041 RchiOBHm_Chr4g0440351 RchiOBHm_Chr5g0020671 RchiOBHm_Chr5g0027821 RchiOBHm_Chr5g0045351 RchiOBHm_Chr5g0062441 RchiOBHm_Chr6g0278731
rosa_laevigata	RLG00000006189 RLG00000009789 RLG00000009916 RLG00000013392 RLG00000013526 RLG00000013972 RLG00000020257 RLG00000031746 RLG00000031753 RLG00000033045 RLG00000033161
rosa_multiflora	Rmu_co8052728.1_g000001 Rmu_sc0001159.1_g000033 Rmu_sc0001685.1_g000045 Rmu_sc0003684.1_g000002 Rmu_sc0004520.1_g000016 Rmu_sc0012764.1_g000009 Rmu_sc0017399.1_g000002
rosa_roxburghii	Rroxscaffold_5G00343960 Rroxscaffold_5G00381230
rosa_rugosa	Rorug02G0009200 Rorug04G0056800 Rorug04G0056900 Rorug04G0325800 Rorug04G0335700
rosa_samantha	Rh2BG469200 Rh3CG261100 Rh3DG257000 Rh4AG376800 Rh4BG090100 Rh4BG389800 Rh4CG404600 Rh4DG383500 Rh5AG303800 Rh5AG409600 Rh5BG076900 Rh5BG193800 Rh5BG193900 Rh5BG199300 Rh5CG163100 Rh5CG214100 Rh5DG322500 Rh7BG133700
rosa_wichuraiana	Rw4G032260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1821
AatII	GACGTC	1 cut(s)	270
Acc16I	TGCGCA	1 cut(s)	1008
Acc36I	ACCTGC	3 cut(s)	817, 1626, 1821
AccI	GTMKAC	3 cut(s)	270, 572, 1734
AccII	CGCG	3 cut(s)	75, 533, 706
AciI	CCGC	8 cut(s)	144, 533, 536, 578, 581, 691, 706, 795
AclWI	GGATC	1 cut(s)	1795
AcsI	RAATTY	3 cut(s)	164, 652, 1081
AcuI	CTGAAG	1 cut(s)	1071
AcvI	CACGTG	1 cut(s)	334
AcyI	GRCGYC	1 cut(s)	267
AfaI	GTAC	3 cut(s)	929, 1310, 1473
AfeI	AGCGCT	1 cut(s)	885
AfiI	CCNNNNNNNGG	1 cut(s)	361
AflIII	ACRYGT	2 cut(s)	333, 1305
AgsI	TTSAA	4 cut(s)	635, 1141, 1177, 1728
AhlI	ACTAGT	1 cut(s)	88
AjnI	CCWGG	4 cut(s)	930, 956, 1737, 1891
Alw26I	GTCTC	1 cut(s)	815
AlwI	GGATC	1 cut(s)	1795
Aor51HI	AGCGCT	1 cut(s)	885
AoxI	GGCC	1 cut(s)	228
ApeKI	GCWGC	9 cut(s)	391, 394, 620, 701, 788, 919, 1379, 1484, 1515
ApoI	RAATTY	3 cut(s)	164, 652, 1081
ArsI	GACNNNNNNTTYG	4 cut(s)	760, 792, 1066, 1098
AseI	ATTAAT	1 cut(s)	462
Asp700I	GAANNNNTTC	2 cut(s)	463, 1181
AspLEI	GCGC	6 cut(s)	75, 197, 533, 706, 886, 1009
AspS9I	GGNCC	3 cut(s)	229, 319, 1888
AsuC2I	CCSGG	2 cut(s)	253, 388
AsuHPI	GGTGA	7 cut(s)	85, 201, 280, 550, 595, 670, 761
AsuII	TTCGAA	3 cut(s)	54, 902, 1035
AsuNHI	GCTAGC	1 cut(s)	44
AvaII	GGWCC	2 cut(s)	319, 1888
BanII	GRGCYC	1 cut(s)	687
BarI	GAAGNNNNNNTAC	2 cut(s)	1455, 1487
BbrPI	CACGTG	1 cut(s)	334
BbsI	GAAGAC	2 cut(s)	642, 1493
BbvI	GCAGC	9 cut(s)	378, 381, 607, 688, 800, 931, 1366, 1496, 1527
BccI	CCATC	5 cut(s)	511, 944, 1536, 1555, 1858
BceAI	ACGGC	2 cut(s)	101, 362
BciT130I	CCWGG	4 cut(s)	932, 958, 1739, 1893
BciVI	GTATCC	1 cut(s)	130
BclI	TGATCA	1 cut(s)	1089
BcnI	CCSGG	2 cut(s)	253, 388
BcoDI	GTCTC	1 cut(s)	815
BcuI	ACTAGT	1 cut(s)	88
BfaI	CTAG	7 cut(s)	33, 45, 89, 480, 1109, 1652, 1706
BfmI	CTRYAG	1 cut(s)	474
BfoI	RGCGCY	1 cut(s)	887
BfuAI	ACCTGC	3 cut(s)	817, 1626, 1821
BfuI	GTATCC	1 cut(s)	130
Bme1390I	CCNGG	6 cut(s)	253, 388, 932, 958, 1739, 1893
Bme18I	GGWCC	2 cut(s)	319, 1888
BmgT120I	GGNCC	3 cut(s)	229, 319, 1888
BmiI	GGNNCC	2 cut(s)	955, 1890
BmrFI	CCNGG	6 cut(s)	253, 388, 932, 958, 1739, 1893
BmsI	GCATC	5 cut(s)	1137, 1366, 1446, 1694, 1831
BmtI	GCTAGC	1 cut(s)	48
BpiI	GAAGAC	2 cut(s)	642, 1493
Bpu14I	TTCGAA	3 cut(s)	54, 902, 1035
BpuMI	CCSGG	2 cut(s)	253, 388
Bsa29I	ATCGAT	1 cut(s)	852
BsaAI	YACGTR	1 cut(s)	334
BsaBI	GATNNNNATC	1 cut(s)	848
BsaHI	GRCGYC	1 cut(s)	267
BsaJI	CCNNGG	3 cut(s)	1331, 1738, 1891
BsaXI	ACNNNNNCTCC	6 cut(s)	160, 190, 257, 287, 599, 629
Bsc4I	CCNNNNNNNGG	1 cut(s)	361
Bse118I	RCCGGY	1 cut(s)	643
Bse1I	ACTGG	3 cut(s)	880, 951, 1162
Bse3DI	GCAATG	4 cut(s)	406, 526, 1232, 1401
Bse8I	GATNNNNATC	1 cut(s)	848
BseBI	CCWGG	4 cut(s)	932, 958, 1739, 1893
BseCI	ATCGAT	1 cut(s)	852
BseDI	CCNNGG	3 cut(s)	1331, 1738, 1891
BseGI	GGATG	8 cut(s)	522, 562, 724, 955, 1152, 1547, 1563, 1846
BseJI	GATNNNNATC	1 cut(s)	848
BseLI	CCNNNNNNNGG	1 cut(s)	361
BseMI	GCAATG	4 cut(s)	406, 526, 1232, 1401
BseMII	CTCAG	1 cut(s)	826
BseNI	ACTGG	3 cut(s)	880, 951, 1162
BseRI	GAGGAG	5 cut(s)	168, 173, 204, 233, 265
BseXI	GCAGC	9 cut(s)	378, 381, 607, 688, 800, 931, 1366, 1496, 1527
BseYI	CCCAGC	1 cut(s)	1820
BsgI	GTGCAG	3 cut(s)	1041, 1227, 1534
Bsh1236I	CGCG	3 cut(s)	75, 533, 706
BshFI	GGCC	1 cut(s)	230
BshVI	ATCGAT	1 cut(s)	852
BsiSI	CCGG	3 cut(s)	252, 387, 644
BslFI	GGGAC	2 cut(s)	1756, 1874
BslI	CCNNNNNNNGG	1 cut(s)	361
BsmAI	GTCTC	1 cut(s)	815
BsmFI	GGGAC	2 cut(s)	1756, 1874
BsmI	GAATGC	5 cut(s)	508, 528, 766, 982, 1009
BsnI	GGCC	1 cut(s)	230
Bsp119I	TTCGAA	3 cut(s)	54, 902, 1035
Bsp1286I	GDGCHC	1 cut(s)	687
Bsp1407I	TGTACA	1 cut(s)	1308
Bsp143I	GATC	5 cut(s)	206, 1089, 1276, 1628, 1800
BspACI	CCGC	8 cut(s)	144, 533, 536, 578, 581, 691, 706, 795
BspANI	GGCC	1 cut(s)	230
BspCNI	CTCAG	1 cut(s)	825
BspDI	ATCGAT	1 cut(s)	852
BspFNI	CGCG	3 cut(s)	75, 533, 706
BspLI	GGNNCC	2 cut(s)	955, 1890
BspMI	ACCTGC	3 cut(s)	817, 1626, 1821
BspOI	GCTAGC	1 cut(s)	48
BspPI	GGATC	1 cut(s)	1795
BspT104I	TTCGAA	3 cut(s)	54, 902, 1035
BsrDI	GCAATG	4 cut(s)	406, 526, 1232, 1401
BsrFI	RCCGGY	1 cut(s)	643
BsrGI	TGTACA	1 cut(s)	1308
BsrI	ACTGG	3 cut(s)	880, 951, 1162
BssAI	RCCGGY	1 cut(s)	643
BssECI	CCNNGG	3 cut(s)	1331, 1738, 1891
BssMI	GATC	5 cut(s)	206, 1089, 1276, 1628, 1800
BssNI	GRCGYC	1 cut(s)	267
BssT1I	CCWWGG	1 cut(s)	1331
Bst2UI	CCWGG	4 cut(s)	932, 958, 1739, 1893
Bst4CI	ACNGT	2 cut(s)	404, 1523
Bst6I	CTCTTC	2 cut(s)	156, 1336
BstACI	GRCGYC	1 cut(s)	267
BstAUI	TGTACA	1 cut(s)	1308
BstBAI	YACGTR	1 cut(s)	334
BstBI	TTCGAA	3 cut(s)	54, 902, 1035
BstC8I	GCNNGC	8 cut(s)	46, 193, 793, 824, 924, 1152, 1200, 1251
BstDEI	CTNAG	1 cut(s)	812
BstF5I	GGATG	8 cut(s)	522, 562, 724, 955, 1152, 1547, 1563, 1846
BstFNI	CGCG	3 cut(s)	75, 533, 706
BstH2I	RGCGCY	1 cut(s)	887
BstHHI	GCGC	6 cut(s)	75, 197, 533, 706, 886, 1009
BstKTI	GATC	5 cut(s)	209, 1092, 1279, 1631, 1803
BstMAI	GTCTC	1 cut(s)	815
BstMBI	GATC	5 cut(s)	206, 1089, 1276, 1628, 1800
BstMWI	GCNNNNNNNGC	3 cut(s)	81, 986, 1400
BstNI	CCWGG	4 cut(s)	932, 958, 1739, 1893
BstNSI	RCATGY	3 cut(s)	643, 1253, 1309
BstSCI	CCNGG	6 cut(s)	251, 386, 930, 956, 1737, 1891
BstSFI	CTRYAG	1 cut(s)	474
BstUI	CGCG	3 cut(s)	75, 533, 706
BstV1I	GCAGC	9 cut(s)	378, 381, 607, 688, 800, 931, 1366, 1496, 1527
BstV2I	GAAGAC	2 cut(s)	642, 1493
Bsu15I	ATCGAT	1 cut(s)	852
BsuI	GTATCC	1 cut(s)	130
BsuRI	GGCC	1 cut(s)	230
BsuTUI	ATCGAT	1 cut(s)	852
BtsCI	GGATG	8 cut(s)	522, 562, 724, 955, 1152, 1547, 1563, 1846
BtsI	GCAGTG	3 cut(s)	771, 1016, 1279
BtsIMutI	CAGTG	6 cut(s)	771, 1016, 1077, 1099, 1279, 1528
BveI	ACCTGC	3 cut(s)	817, 1626, 1821
Cac8I	GCNNGC	8 cut(s)	46, 193, 793, 824, 924, 1152, 1200, 1251
CfoI	GCGC	6 cut(s)	75, 197, 533, 706, 886, 1009
Cfr10I	RCCGGY	1 cut(s)	643
Cfr13I	GGNCC	3 cut(s)	229, 319, 1888
ClaI	ATCGAT	1 cut(s)	852
CsiI	ACCWGGT	1 cut(s)	930
Csp6I	GTAC	3 cut(s)	928, 1309, 1472
CviQI	GTAC	3 cut(s)	928, 1309, 1472
DdeI	CTNAG	1 cut(s)	812
DpnI	GATC	5 cut(s)	208, 1091, 1278, 1630, 1802
DpnII	GATC	5 cut(s)	206, 1089, 1276, 1628, 1800
Eam1104I	CTCTTC	2 cut(s)	156, 1336
EarI	CTCTTC	2 cut(s)	156, 1336
Eco130I	CCWWGG	1 cut(s)	1331
Eco24I	GRGCYC	1 cut(s)	687
Eco47I	GGWCC	2 cut(s)	319, 1888
Eco47III	AGCGCT	1 cut(s)	885
Eco57I	CTGAAG	1 cut(s)	1071
Eco72I	CACGTG	1 cut(s)	334
EcoO109I	RGGNCCY	1 cut(s)	1888
EcoRI	GAATTC	1 cut(s)	1081
EcoRII	CCWGG	4 cut(s)	930, 956, 1737, 1891
EcoT14I	CCWWGG	1 cut(s)	1331
EcoT22I	ATGCAT	1 cut(s)	528
EcoT38I	GRGCYC	1 cut(s)	687
ErhI	CCWWGG	1 cut(s)	1331
FaqI	GGGAC	2 cut(s)	1756, 1874
FauI	CCCGC	1 cut(s)	699
FbaI	TGATCA	1 cut(s)	1089
FblI	GTMKAC	3 cut(s)	270, 572, 1734
FokI	GGATG	8 cut(s)	529, 569, 731, 962, 1159, 1554, 1570, 1853
FriOI	GRGCYC	1 cut(s)	687
FspBI	CTAG	7 cut(s)	33, 45, 89, 480, 1109, 1652, 1706
FspI	TGCGCA	1 cut(s)	1008
GlaI	GCGC	6 cut(s)	74, 196, 532, 705, 885, 1008
GsaI	CCCAGC	1 cut(s)	1824
HaeII	RGCGCY	1 cut(s)	887
HaeIII	GGCC	1 cut(s)	230
HapII	CCGG	3 cut(s)	252, 387, 644
HhaI	GCGC	6 cut(s)	75, 197, 533, 706, 886, 1009
Hin1I	GRCGYC	1 cut(s)	267
Hin6I	GCGC	6 cut(s)	73, 195, 531, 704, 884, 1007
HinP1I	GCGC	6 cut(s)	73, 195, 531, 704, 884, 1007
HincII	GTYRAC	2 cut(s)	573, 1534
HindII	GTYRAC	2 cut(s)	573, 1534
HindIII	AAGCTT	1 cut(s)	1125
HinfI	GANTC	6 cut(s)	293, 1046, 1067, 1211, 1240, 1352
HpaII	CCGG	3 cut(s)	252, 387, 644
HphI	GGTGA	7 cut(s)	85, 201, 280, 550, 595, 670, 761
Hpy166II	GTNNAC	7 cut(s)	271, 573, 969, 1232, 1322, 1534, 1735
Hpy188III	TCNNGA	3 cut(s)	433, 1141, 1881
Hpy8I	GTNNAC	7 cut(s)	271, 573, 969, 1232, 1322, 1534, 1735
Hpy99I	CGWCG	2 cut(s)	269, 344
HpyAV	CCTTC	5 cut(s)	1046, 1108, 1192, 1689, 1831
HpyCH4III	ACNGT	2 cut(s)	404, 1523
HpyCH4IV	ACGT	2 cut(s)	267, 333
HpyF10VI	GCNNNNNNNGC	3 cut(s)	81, 986, 1400
HpyF3I	CTNAG	1 cut(s)	812
HpySE526I	ACGT	2 cut(s)	267, 333
Hsp92I	GRCGYC	1 cut(s)	267
HspAI	GCGC	6 cut(s)	73, 195, 531, 704, 884, 1007
Ksp22I	TGATCA	1 cut(s)	1089
Kzo9I	GATC	5 cut(s)	206, 1089, 1276, 1628, 1800
LmnI	GCTCC	1 cut(s)	960
Lsp1109I	GCAGC	9 cut(s)	378, 381, 607, 688, 800, 931, 1366, 1496, 1527
LweI	GCATC	5 cut(s)	1137, 1366, 1446, 1694, 1831
MabI	ACCWGGT	1 cut(s)	930
MaeI	CTAG	7 cut(s)	33, 45, 89, 480, 1109, 1652, 1706
MaeII	ACGT	2 cut(s)	267, 333
MaeIII	GTNAC	5 cut(s)	91, 398, 469, 766, 1072
MalI	GATC	5 cut(s)	208, 1091, 1278, 1630, 1802
MboI	GATC	5 cut(s)	206, 1089, 1276, 1628, 1800
MboII	GAAGA	9 cut(s)	143, 250, 553, 647, 742, 1353, 1425, 1475, 1493
MhlI	GDGCHC	1 cut(s)	687
MluCI	AATT	8 cut(s)	164, 459, 463, 652, 861, 1081, 1299, 1769
MlyI	GAGTC	1 cut(s)	287
MmeI	TCCRAC	3 cut(s)	288, 427, 696
Mph1103I	ATGCAT	1 cut(s)	528
MroXI	GAANNNNTTC	2 cut(s)	463, 1181
MseI	TTAA	4 cut(s)	462, 648, 726, 1059
MslI	CAYNNNNRTG	3 cut(s)	1248, 1310, 1728
MspA1I	CMGCKG	2 cut(s)	578, 922
MspI	CCGG	3 cut(s)	252, 387, 644
MspR9I	CCNGG	6 cut(s)	253, 388, 932, 958, 1739, 1893
Mva1269I	GAATGC	5 cut(s)	508, 528, 766, 982, 1009
MvaI	CCWGG	4 cut(s)	932, 958, 1739, 1893
MvnI	CGCG	3 cut(s)	75, 533, 706
MwoI	GCNNNNNNNGC	3 cut(s)	81, 986, 1400
NciI	CCSGG	2 cut(s)	253, 388
NdeII	GATC	5 cut(s)	206, 1089, 1276, 1628, 1800
NheI	GCTAGC	1 cut(s)	44
NlaIV	GGNNCC	2 cut(s)	955, 1890
NmuCI	GTSAC	3 cut(s)	91, 766, 1072
NsbI	TGCGCA	1 cut(s)	1008
NsiI	ATGCAT	1 cut(s)	528
NspI	RCATGY	3 cut(s)	643, 1253, 1309
NspV	TTCGAA	3 cut(s)	54, 902, 1035
PaeI	GCATGC	1 cut(s)	1253
PaqCI	CACCTGC	1 cut(s)	1821
PciI	ACATGT	1 cut(s)	1305
PcsI	WCGNNNNNNNCGW	1 cut(s)	339
PctI	GAATGC	5 cut(s)	508, 528, 766, 982, 1009
PdmI	GAANNNNTTC	2 cut(s)	463, 1181
PfeI	GAWTC	5 cut(s)	1046, 1067, 1211, 1240, 1352
PleI	GAGTC	1 cut(s)	287
PmaCI	CACGTG	1 cut(s)	334
PmlI	CACGTG	1 cut(s)	334
PpsI	GAGTC	1 cut(s)	287
Ppu21I	YACGTR	1 cut(s)	334
PpuMI	RGGWCCY	1 cut(s)	1888
PscI	ACATGT	1 cut(s)	1305
PshBI	ATTAAT	1 cut(s)	462
Psp5II	RGGWCCY	1 cut(s)	1888
Psp6I	CCWGG	4 cut(s)	930, 956, 1737, 1891
PspCI	CACGTG	1 cut(s)	334
PspFI	CCCAGC	1 cut(s)	1820
PspGI	CCWGG	4 cut(s)	930, 956, 1737, 1891
PspN4I	GGNNCC	2 cut(s)	955, 1890
PspPI	GGNCC	3 cut(s)	229, 319, 1888
PspPPI	RGGWCCY	1 cut(s)	1888
PvuII	CAGCTG	1 cut(s)	922
RsaI	GTAC	3 cut(s)	929, 1310, 1473
RsaNI	GTAC	3 cut(s)	928, 1309, 1472
RseI	CAYNNNNRTG	3 cut(s)	1248, 1310, 1728
SalI	GTCGAC	1 cut(s)	571
SaqAI	TTAA	4 cut(s)	462, 648, 726, 1059
Sau3AI	GATC	5 cut(s)	206, 1089, 1276, 1628, 1800
Sau96I	GGNCC	3 cut(s)	229, 319, 1888
SchI	GAGTC	1 cut(s)	287
ScrFI	CCNGG	6 cut(s)	253, 388, 932, 958, 1739, 1893
SduI	GDGCHC	1 cut(s)	687
SexAI	ACCWGGT	1 cut(s)	930
SfaNI	GCATC	5 cut(s)	1137, 1366, 1446, 1694, 1831
SfcI	CTRYAG	1 cut(s)	474
SfuI	TTCGAA	3 cut(s)	54, 902, 1035
SinI	GGWCC	2 cut(s)	319, 1888
SmiMI	CAYNNNNRTG	3 cut(s)	1248, 1310, 1728
SpeI	ACTAGT	1 cut(s)	88
SphI	GCATGC	1 cut(s)	1253
Sse9I	AATT	8 cut(s)	164, 459, 463, 652, 861, 1081, 1299, 1769
SsiI	CCGC	8 cut(s)	144, 533, 536, 578, 581, 691, 706, 795
SspI	AATATT	1 cut(s)	15
SspMI	CTAG	7 cut(s)	33, 45, 89, 480, 1109, 1652, 1706
StyD4I	CCNGG	6 cut(s)	251, 386, 930, 956, 1737, 1891
StyI	CCWWGG	1 cut(s)	1331
TaaI	ACNGT	2 cut(s)	404, 1523
TaiI	ACGT	2 cut(s)	270, 336
TasI	AATT	8 cut(s)	164, 459, 463, 652, 861, 1081, 1299, 1769
TatI	WGTACW	2 cut(s)	1308, 1471
TauI	GCSGC	2 cut(s)	536, 581
TfiI	GAWTC	5 cut(s)	1046, 1067, 1211, 1240, 1352
Tru1I	TTAA	4 cut(s)	462, 648, 726, 1059
Tru9I	TTAA	4 cut(s)	462, 648, 726, 1059
TscAI	CASTG	6 cut(s)	771, 1016, 1077, 1099, 1279, 1528
TseFI	GTSAC	3 cut(s)	91, 766, 1072
TseI	GCWGC	9 cut(s)	391, 394, 620, 701, 788, 919, 1379, 1484, 1515
Tsp45I	GTSAC	3 cut(s)	91, 766, 1072
TspGWI	ACGGA	1 cut(s)	332
TspRI	CASTG	6 cut(s)	771, 1016, 1077, 1099, 1279, 1528
VpaK11BI	GGWCC	2 cut(s)	319, 1888
VspI	ATTAAT	1 cut(s)	462
XapI	RAATTY	3 cut(s)	164, 652, 1081
XceI	RCATGY	3 cut(s)	643, 1253, 1309
XmiI	GTMKAC	3 cut(s)	270, 572, 1734
XmnI	GAANNNNTTC	2 cut(s)	463, 1181
XspI	CTAG	7 cut(s)	33, 45, 89, 480, 1109, 1652, 1706
ZraI	GACGTC	1 cut(s)	268
Zsp2I	ATGCAT	1 cut(s)	528

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.