Pentatricopeptide repeat domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 59 |
| AccI | GTMKAC | 1 cut(s) | 45 |
| AciI | CCGC | 1 cut(s) | 57 |
| AcsI | RAATTY | 1 cut(s) | 235 |
| AgsI | TTSAA | 1 cut(s) | 235 |
| AjiI | CACGTC | 1 cut(s) | 43 |
| AluBI | AGCT | 3 cut(s) | 82, 251, 283 |
| AluI | AGCT | 3 cut(s) | 82, 251, 283 |
| ApoI | RAATTY | 1 cut(s) | 235 |
| AspS9I | GGNCC | 1 cut(s) | 4 |
| AsuHPI | GGTGA | 1 cut(s) | 119 |
| AvaII | GGWCC | 1 cut(s) | 4 |
| BccI | CCATC | 2 cut(s) | 21, 283 |
| BfaI | CTAG | 1 cut(s) | 252 |
| Bme18I | GGWCC | 1 cut(s) | 4 |
| BmgBI | CACGTC | 1 cut(s) | 43 |
| BmgT120I | GGNCC | 1 cut(s) | 4 |
| BpuEI | CTTGAG | 1 cut(s) | 89 |
| BseGI | GGATG | 2 cut(s) | 100, 294 |
| BseMII | CTCAG | 1 cut(s) | 63 |
| BseRI | GAGGAG | 1 cut(s) | 8 |
| BseYI | CCCAGC | 1 cut(s) | 283 |
| BsmI | GAATGC | 1 cut(s) | 300 |
| BspACI | CCGC | 1 cut(s) | 57 |
| BspCNI | CTCAG | 1 cut(s) | 62 |
| BsrBI | CCGCTC | 1 cut(s) | 59 |
| Bst4CI | ACNGT | 1 cut(s) | 154 |
| BstDEI | CTNAG | 1 cut(s) | 49 |
| BstF5I | GGATG | 2 cut(s) | 100, 294 |
| BtgZI | GCGATG | 1 cut(s) | 164 |
| BtrI | CACGTC | 1 cut(s) | 43 |
| BtsCI | GGATG | 2 cut(s) | 100, 294 |
| BtsIMutI | CAGTG | 1 cut(s) | 150 |
| Cfr13I | GGNCC | 1 cut(s) | 4 |
| CseI | GACGC | 1 cut(s) | 77 |
| CviAII | CATG | 3 cut(s) | 64, 76, 91 |
| CviJI | RGCY | 5 cut(s) | 53, 82, 191, 251, 283 |
| CviKI_1 | RGCY | 5 cut(s) | 53, 82, 191, 251, 283 |
| DdeI | CTNAG | 1 cut(s) | 49 |
| DraI | TTTAAA | 1 cut(s) | 195 |
| Eco47I | GGWCC | 1 cut(s) | 4 |
| EcoRI | GAATTC | 1 cut(s) | 235 |
| EcoT22I | ATGCAT | 1 cut(s) | 300 |
| FaeI | CATG | 3 cut(s) | 67, 79, 94 |
| FaiI | YATR | 4 cut(s) | 9, 65, 77, 92 |
| FatI | CATG | 3 cut(s) | 63, 75, 90 |
| FblI | GTMKAC | 1 cut(s) | 45 |
| FokI | GGATG | 1 cut(s) | 107 |
| FspBI | CTAG | 1 cut(s) | 252 |
| GsaI | CCCAGC | 1 cut(s) | 287 |
| HgaI | GACGC | 1 cut(s) | 77 |
| Hin1II | CATG | 3 cut(s) | 67, 79, 94 |
| HphI | GGTGA | 1 cut(s) | 119 |
| Hpy166II | GTNNAC | 3 cut(s) | 46, 148, 157 |
| Hpy8I | GTNNAC | 3 cut(s) | 46, 148, 157 |
| HpyCH4III | ACNGT | 1 cut(s) | 154 |
| HpyCH4IV | ACGT | 1 cut(s) | 42 |
| HpyCH4V | TGCA | 1 cut(s) | 298 |
| HpyF3I | CTNAG | 1 cut(s) | 49 |
| HpySE526I | ACGT | 1 cut(s) | 42 |
| Hsp92II | CATG | 3 cut(s) | 67, 79, 94 |
| LpnPI | CCDG | 2 cut(s) | 214, 269 |
| MaeI | CTAG | 1 cut(s) | 252 |
| MaeII | ACGT | 1 cut(s) | 42 |
| MaeIII | GTNAC | 2 cut(s) | 241, 269 |
| MbiI | CCGCTC | 1 cut(s) | 59 |
| MboII | GAAGA | 1 cut(s) | 25 |
| MluCI | AATT | 1 cut(s) | 235 |
| MnlI | CCTC | 4 cut(s) | 29, 135, 181, 215 |
| Mph1103I | ATGCAT | 1 cut(s) | 300 |
| MseI | TTAA | 3 cut(s) | 194, 203, 301 |
| Mva1269I | GAATGC | 1 cut(s) | 300 |
| NlaIII | CATG | 3 cut(s) | 67, 79, 94 |
| NmuCI | GTSAC | 1 cut(s) | 269 |
| NsiI | ATGCAT | 1 cut(s) | 300 |
| PctI | GAATGC | 1 cut(s) | 300 |
| PspFI | CCCAGC | 1 cut(s) | 283 |
| PspPI | GGNCC | 1 cut(s) | 4 |
| SaqAI | TTAA | 3 cut(s) | 194, 203, 301 |
| Sau96I | GGNCC | 1 cut(s) | 4 |
| SetI | ASST | 7 cut(s) | 45, 84, 111, 201, 233, 253, 285 |
| SinI | GGWCC | 1 cut(s) | 4 |
| SmlI | CTYRAG | 1 cut(s) | 104 |
| SmoI | CTYRAG | 1 cut(s) | 104 |
| Sse9I | AATT | 1 cut(s) | 235 |
| SsiI | CCGC | 1 cut(s) | 57 |
| SspMI | CTAG | 1 cut(s) | 252 |
| TaaI | ACNGT | 1 cut(s) | 154 |
| TaiI | ACGT | 1 cut(s) | 45 |
| TasI | AATT | 1 cut(s) | 235 |
| Tru1I | TTAA | 3 cut(s) | 194, 203, 301 |
| Tru9I | TTAA | 3 cut(s) | 194, 203, 301 |
| TscAI | CASTG | 1 cut(s) | 157 |
| TseFI | GTSAC | 1 cut(s) | 269 |
| Tsp45I | GTSAC | 1 cut(s) | 269 |
| TspDTI | ATGAA | 1 cut(s) | 92 |
| TspGWI | ACGGA | 1 cut(s) | 133 |
| TspRI | CASTG | 1 cut(s) | 157 |
| VpaK11BI | GGWCC | 1 cut(s) | 4 |
| XapI | RAATTY | 1 cut(s) | 235 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 61 |
| XmiI | GTMKAC | 1 cut(s) | 45 |
| XspI | CTAG | 1 cut(s) | 252 |
| Zsp2I | ATGCAT | 1 cut(s) | 300 |