Pentatricopeptide repeat domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 134 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 308 |
| AgsI | TTSAA | 1 cut(s) | 233 |
| AluBI | AGCT | 4 cut(s) | 19, 142, 198, 261 |
| AluI | AGCT | 4 cut(s) | 19, 142, 198, 261 |
| ApeKI | GCWGC | 1 cut(s) | 218 |
| AsuHPI | GGTGA | 2 cut(s) | 56, 148 |
| BbvI | GCAGC | 1 cut(s) | 205 |
| BccI | CCATC | 1 cut(s) | 109 |
| BisI | GCNGC | 1 cut(s) | 219 |
| BlpI | GCTNAGC | 1 cut(s) | 257 |
| BlsI | GCNGC | 1 cut(s) | 220 |
| BmiI | GGNNCC | 1 cut(s) | 300 |
| BmsI | GCATC | 1 cut(s) | 25 |
| Bpu10I | CCTNAGC | 1 cut(s) | 143 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 257 |
| BpuEI | CTTGAG | 1 cut(s) | 26 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 308 |
| Bse3DI | GCAATG | 1 cut(s) | 124 |
| BseGI | GGATG | 2 cut(s) | 120, 326 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 308 |
| BseMI | GCAATG | 1 cut(s) | 124 |
| BseMII | CTCAG | 2 cut(s) | 189, 248 |
| BseXI | GCAGC | 1 cut(s) | 205 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 308 |
| BsmI | GAATGC | 1 cut(s) | 126 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 257 |
| BspACI | CCGC | 1 cut(s) | 134 |
| BspCNI | CTCAG | 2 cut(s) | 188, 249 |
| BspLI | GGNNCC | 1 cut(s) | 300 |
| BsrDI | GCAATG | 1 cut(s) | 124 |
| BstDEI | CTNAG | 3 cut(s) | 143, 175, 257 |
| BstF5I | GGATG | 2 cut(s) | 120, 326 |
| BstV1I | GCAGC | 1 cut(s) | 205 |
| BtsCI | GGATG | 2 cut(s) | 120, 326 |
| CseI | GACGC | 1 cut(s) | 14 |
| CviAII | CATG | 3 cut(s) | 13, 28, 266 |
| CviJI | RGCY | 5 cut(s) | 19, 142, 198, 261, 283 |
| CviKI_1 | RGCY | 5 cut(s) | 19, 142, 198, 261, 283 |
| DdeI | CTNAG | 3 cut(s) | 143, 175, 257 |
| EcoT22I | ATGCAT | 1 cut(s) | 126 |
| FaeI | CATG | 3 cut(s) | 16, 31, 269 |
| FaiI | YATR | 7 cut(s) | 14, 29, 165, 188, 237, 239, 267 |
| FatI | CATG | 3 cut(s) | 12, 27, 265 |
| FauNDI | CATATG | 1 cut(s) | 237 |
| Fnu4HI | GCNGC | 1 cut(s) | 219 |
| FokI | GGATG | 1 cut(s) | 127 |
| Fsp4HI | GCNGC | 1 cut(s) | 219 |
| GluI | GCNGC | 1 cut(s) | 219 |
| HgaI | GACGC | 1 cut(s) | 14 |
| Hin1II | CATG | 3 cut(s) | 16, 31, 269 |
| HindIII | AAGCTT | 1 cut(s) | 140 |
| HphI | GGTGA | 2 cut(s) | 56, 148 |
| Hpy188III | TCNNGA | 1 cut(s) | 43 |
| HpyCH4V | TGCA | 5 cut(s) | 38, 104, 124, 221, 289 |
| HpyF3I | CTNAG | 3 cut(s) | 143, 175, 257 |
| Hsp92II | CATG | 3 cut(s) | 16, 31, 269 |
| LpnPI | CCDG | 3 cut(s) | 93, 95, 255 |
| Lsp1109I | GCAGC | 1 cut(s) | 205 |
| LweI | GCATC | 1 cut(s) | 25 |
| MaeIII | GTNAC | 1 cut(s) | 95 |
| MluCI | AATT | 1 cut(s) | 303 |
| MmeI | TCCRAC | 1 cut(s) | 298 |
| MnlI | CCTC | 2 cut(s) | 35, 72 |
| Mph1103I | ATGCAT | 1 cut(s) | 126 |
| MseI | TTAA | 3 cut(s) | 246, 306, 328 |
| Mva1269I | GAATGC | 1 cut(s) | 126 |
| NdeI | CATATG | 1 cut(s) | 237 |
| NlaIII | CATG | 3 cut(s) | 16, 31, 269 |
| NlaIV | GGNNCC | 1 cut(s) | 300 |
| NmuCI | GTSAC | 1 cut(s) | 95 |
| NsiI | ATGCAT | 1 cut(s) | 126 |
| PctI | GAATGC | 1 cut(s) | 126 |
| PkrI | GCNGC | 1 cut(s) | 220 |
| PspN4I | GGNNCC | 1 cut(s) | 300 |
| SaqAI | TTAA | 3 cut(s) | 246, 306, 328 |
| SatI | GCNGC | 1 cut(s) | 219 |
| SetI | ASST | 5 cut(s) | 21, 27, 144, 200, 263 |
| SfaNI | GCATC | 1 cut(s) | 25 |
| SmlI | CTYRAG | 1 cut(s) | 41 |
| SmoI | CTYRAG | 1 cut(s) | 41 |
| Sse9I | AATT | 1 cut(s) | 303 |
| SsiI | CCGC | 1 cut(s) | 134 |
| TaqI | TCGA | 2 cut(s) | 51, 194 |
| TasI | AATT | 1 cut(s) | 303 |
| Tru1I | TTAA | 3 cut(s) | 246, 306, 328 |
| Tru9I | TTAA | 3 cut(s) | 246, 306, 328 |
| TseFI | GTSAC | 1 cut(s) | 95 |
| TseI | GCWGC | 1 cut(s) | 218 |
| Tsp45I | GTSAC | 1 cut(s) | 95 |
| TspDTI | ATGAA | 2 cut(s) | 29, 69 |
| Zsp2I | ATGCAT | 1 cut(s) | 126 |