Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001685.1

Orthogroup ID

OG0001126

Physical Location & Seq

Genomic Coordinates Forward (+)

244443 .. 246744

Gene Structure 2302 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001685.1_g000045.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

atgaagcgcgaaataggcagactagtcgctgatggattatacagagaagccctatgcttatatactcaacgccactccgcttcttttccccctcacaaattcacattccctccgcttctcaaagcctgtgccaagctccgatcagcccctcaagcccaaatggtccacacgcatctcctcaaaaccgggttcttctccgacgtctactcagccaccgctctcaccgacgcttacatgaagctcaatctcatggacgatgcgctcaaggtgttcgacgaaatgcctgaccgaaacttggcttcggtaaacgctgtgatttccgggctgttgcataatggacatcgcagagaggctttaaaggtgttcaagagcgttggttttggagggttcgggttgaattcggttactatagccagtgtgctttcgccgtgtgacaatgcgaaggaggggatgggaatgcattgcgctgcggtgaagctcggggttgagagtgatgtttatgttgctacatcagctgtgagtatgtattcgagctgtggagagttggtttctgctgcaaagttgtttgaagatatgcctgtcaagaatgtggtgagctataatgcttttataacagggcttatgcagaatggggttccaagggtggtgttggatgtgtttaagaaaatgagagcatgtaaaggtgaaaatccgaattcagtgacattggtttcggttctctctgcttgtgctattgttttgtatctccgatttggcaggcaggttcatggtttgatcgtgaaaattgcgagtgggattgatgctatgactagaacagcgcttgtcgacatgtattccaagtgtgggtgttggcagctcgggtaccaaattttcaaagatctagatgaaacaaggaccttgtttatatggaatgccatgattgcaggaatgatgttgaatgcgcagtgggagattgctgttgagcttttcgaacagctagaatctgaagggtttaagcctgattcagtgacttggaattcaatgatcagcgggttttcacaactggggatgggaaacgaagcttccaagcaggttcatggtttgattgtgaaaattgcgagtggcattgatgctatgactagaacagcgcttgtcgacatgtattccaagtgtgggtgttggcagctcgggtaccaaattttcaaagatctagatgaaacaaggaccttgtttatatggaatgccatgattgcaggaatgatgttgaatgcgcagtgggagattgctgttgagcttttcgaacagctagaatctgaagggtttaagcctgattcagtgacttggaattcaatgatcagcgggttttcacaactggggatgggaaacgaagcttccaagtattttaagagaatgcaatcgactggtgtagctccgagtttgaaatctgtcactagtcttttgcaagcctgcgcagattcatctgctctgcaatgtggacaagaggttcatgggcatgcaattaggactgatattagcagtgatctgttcttttcaaccgctctcattgacatgtacatgaaatgtgggcagtcttcttgggcaagaggagtttttgattcctttcatgtaaaacctgacgatccagcattttggaatgcaacaatatctgggtatggaagagaaggagagaatgaatctgcatttcgaatatttgatcagatgctcgaagaaaaagtacaaccaaatgcagcaacttttataagtcttctatctatgtgtagtcacagtggtttaattgacaagggatggcaaatttttaggatgatggatagagattttggaatgaaaccagatccgaaacattatggttgtatgattgaccttttaggtagatcaggcaggttggatgaagcccgggaattaacacacgagttatcagagccttctggatcagtttttgcttctttgctaggtgcttgcgagtcccatttaaatctagaactggggaaagaaatggccataaaactttcaaaattagagccagagaaccctacacctttcctgatactgtccaagatatatgctgggcttgggaggtggaaggatgcagaaatcattaggggaatgatggatgatcaaaagtcaagaaagctccctggctttagcttattacaattgcatgaaagatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

722

Amino Acids

79.95

Weight (kDa)

6.22

Isoelectric Point (pI)

32.28

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001126)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02750
fragaria_vesca	FvH4_4g31750 FvH4_4g31750 FvH4_4g31750
malus_domestica	MD16G1077500.v1.1
prunus_persica	Prupe.1G269600_v2.0.a1
pyrus_communis	pycom16g06680
rosa_chinensis	RchiOBHm_Chr3g0480041 RchiOBHm_Chr4g0440351 RchiOBHm_Chr5g0020671 RchiOBHm_Chr5g0027821 RchiOBHm_Chr5g0045351 RchiOBHm_Chr5g0062441 RchiOBHm_Chr6g0278731
rosa_laevigata	RLG00000006189 RLG00000009789 RLG00000009916 RLG00000013392 RLG00000013526 RLG00000013972 RLG00000020257 RLG00000031746 RLG00000031753 RLG00000033045 RLG00000033161
rosa_multiflora	Rmu_co8052728.1_g000001 Rmu_sc0001159.1_g000033 Rmu_sc0001685.1_g000045 Rmu_sc0003684.1_g000002 Rmu_sc0004520.1_g000016 Rmu_sc0012764.1_g000009 Rmu_sc0017399.1_g000002
rosa_roxburghii	Rroxscaffold_5G00343960 Rroxscaffold_5G00381230
rosa_rugosa	Rorug02G0009200 Rorug04G0056800 Rorug04G0056900 Rorug04G0325800 Rorug04G0335700
rosa_samantha	Rh2BG469200 Rh3CG261100 Rh3DG257000 Rh4AG376800 Rh4BG090100 Rh4BG389800 Rh4CG404600 Rh4DG383500 Rh5AG303800 Rh5AG409600 Rh5BG076900 Rh5BG193800 Rh5BG193900 Rh5BG199300 Rh5CG163100 Rh5CG214100 Rh5DG322500 Rh7BG133700
rosa_wichuraiana	Rw4G032260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	611, 1739
AatII	GACGTC	1 cut(s)	204
Acc16I	TGCGCA	3 cut(s)	942, 1251, 1450
Acc36I	ACCTGC	3 cut(s)	751, 1060, 1869
Acc65I	GGTACC	2 cut(s)	861, 1170
AccB1I	GGYRCC	2 cut(s)	861, 1170
AccBSI	CCGCTC	2 cut(s)	218, 1538
AccI	GTMKAC	3 cut(s)	204, 825, 1134
AccII	CGCG	1 cut(s)	9
AciI	CCGC	7 cut(s)	78, 113, 216, 470, 1029, 1338, 1536
AclWI	GGATC	3 cut(s)	1613, 1826, 1936
AcoI	YGGCCR	1 cut(s)	1995
AcsI	RAATTY	8 cut(s)	98, 397, 694, 867, 1015, 1176, 1324, 1791
AcuI	CTGAAG	2 cut(s)	1005, 1314
AcyI	GRCGYC	1 cut(s)	201
AfaI	GTAC	4 cut(s)	863, 1172, 1553, 1716
AfeI	AGCGCT	2 cut(s)	819, 1128
AfiI	CCNNNNNNNGG	3 cut(s)	295, 843, 1152
AflIII	ACRYGT	3 cut(s)	828, 1137, 1548
AhlI	ACTAGT	2 cut(s)	22, 1430
AjnI	CCWGG	1 cut(s)	2134
AloI	GAACNNNNNNTCC	2 cut(s)	1467, 1499
AlwI	GGATC	3 cut(s)	1613, 1826, 1936
Ama87I	CYCGRG	4 cut(s)	479, 857, 1166, 1893
Aor51HI	AGCGCT	2 cut(s)	819, 1128
AoxI	GGCC	1 cut(s)	1995
ApeKI	GCWGC	5 cut(s)	467, 554, 853, 1162, 1727
ApoI	RAATTY	8 cut(s)	98, 397, 694, 867, 1015, 1176, 1324, 1791
ArsI	GACNNNNNNTTYG	2 cut(s)	694, 726
Asp718I	GGTACC	2 cut(s)	861, 1170
AspLEI	GCGC	8 cut(s)	9, 262, 467, 820, 943, 1129, 1252, 1451
AspS9I	GGNCC	3 cut(s)	163, 894, 1203
AsuC2I	CCSGG	4 cut(s)	187, 322, 1894, 1895
AsuHPI	GGTGA	4 cut(s)	214, 484, 604, 695
AsuII	TTCGAA	3 cut(s)	969, 1278, 1684
AvaI	CYCGRG	4 cut(s)	479, 857, 1166, 1893
AvaII	GGWCC	3 cut(s)	163, 894, 1203
BalI	TGGCCA	1 cut(s)	1997
BanI	GGYRCC	2 cut(s)	861, 1170
BarI	GAAGNNNNNNTAC	2 cut(s)	1698, 1730
BauI	CACGAG	1 cut(s)	1907
BbsI	GAAGAC	2 cut(s)	1563, 1736
BbvI	GCAGC	5 cut(s)	454, 541, 865, 1174, 1739
BccI	CCATC	7 cut(s)	26, 445, 1042, 1351, 1779, 1798, 2101
BceAI	ACGGC	1 cut(s)	412
BcgI	CGANNNNNNTGC	2 cut(s)	7, 41
BciT130I	CCWGG	1 cut(s)	2136
BclI	TGATCA	4 cut(s)	1023, 1332, 1693, 2113
BcnI	CCSGG	4 cut(s)	187, 322, 1894, 1895
BcuI	ACTAGT	2 cut(s)	22, 1430
BfmI	CTRYAG	1 cut(s)	408
BfoI	RGCGCY	2 cut(s)	821, 1130
BfuAI	ACCTGC	3 cut(s)	751, 1060, 1869
BglII	AGATCT	2 cut(s)	877, 1186
BisI	GCNGC	5 cut(s)	468, 555, 854, 1163, 1728
BlsI	GCNGC	5 cut(s)	469, 556, 855, 1164, 1729
Bme1390I	CCNGG	5 cut(s)	187, 322, 1894, 1895, 2136
Bme18I	GGWCC	3 cut(s)	163, 894, 1203
BmeT110I	CYCGRG	4 cut(s)	479, 857, 1166, 1893
BmgT120I	GGNCC	3 cut(s)	163, 894, 1203
BmiI	GGNNCC	3 cut(s)	636, 863, 1172
BmrFI	CCNGG	5 cut(s)	187, 322, 1894, 1895, 2136
BmrI	ACTGGG	3 cut(s)	1052, 1361, 1991
BmsI	GCATC	6 cut(s)	181, 247, 790, 1099, 1689, 2074
BmuI	ACTGGG	3 cut(s)	1052, 1361, 1991
BpiI	GAAGAC	2 cut(s)	1563, 1736
Bpu14I	TTCGAA	3 cut(s)	969, 1278, 1684
BpuEI	CTTGAG	2 cut(s)	135, 248
BpuMI	CCSGG	4 cut(s)	187, 322, 1894, 1895
BsaHI	GRCGYC	1 cut(s)	201
BsaJI	CCNNGG	3 cut(s)	638, 1893, 2134
BsaXI	ACNNNNNCTCC	4 cut(s)	94, 124, 531, 561
Bsc4I	CCNNNNNNNGG	3 cut(s)	295, 843, 1152
Bse1I	ACTGG	5 cut(s)	414, 1047, 1356, 1405, 1986
Bse3DI	GCAATG	2 cut(s)	460, 1475
BseBI	CCWGG	1 cut(s)	2136
BseDI	CCNNGG	3 cut(s)	638, 1893, 2134
BseGI	GGATG	9 cut(s)	456, 658, 1053, 1362, 1790, 1806, 1891, 2089, 2116
BseLI	CCNNNNNNNGG	3 cut(s)	295, 843, 1152
BseMI	GCAATG	2 cut(s)	460, 1475
BseMII	CTCAG	1 cut(s)	222
BseNI	ACTGG	5 cut(s)	414, 1047, 1356, 1405, 1986
BseRI	GAGGAG	2 cut(s)	167, 1599
BseXI	GCAGC	5 cut(s)	454, 541, 865, 1174, 1739
BseYI	CCCAGC	1 cut(s)	2063
Bsh1236I	CGCG	1 cut(s)	9
BshFI	GGCC	1 cut(s)	1997
BshNI	GGYRCC	2 cut(s)	861, 1170
BsiHKCI	CYCGRG	4 cut(s)	479, 857, 1166, 1893
BsiSI	CCGG	3 cut(s)	186, 321, 1894
BslFI	GGGAC	1 cut(s)	1948
BslI	CCNNNNNNNGG	3 cut(s)	295, 843, 1152
BsmFI	GGGAC	1 cut(s)	1948
BsmI	GAATGC	7 cut(s)	462, 916, 943, 1225, 1252, 1395, 1639
BsnI	GGCC	1 cut(s)	1997
BsoBI	CYCGRG	4 cut(s)	479, 857, 1166, 1893
Bsp119I	TTCGAA	3 cut(s)	969, 1278, 1684
Bsp1407I	TGTACA	1 cut(s)	1551
BspACI	CCGC	7 cut(s)	78, 113, 216, 470, 1029, 1338, 1536
BspANI	GGCC	1 cut(s)	1997
BspCNI	CTCAG	1 cut(s)	221
BspFNI	CGCG	1 cut(s)	9
BspLI	GGNNCC	3 cut(s)	636, 863, 1172
BspMI	ACCTGC	3 cut(s)	751, 1060, 1869
BspPI	GGATC	3 cut(s)	1613, 1826, 1936
BspT104I	TTCGAA	3 cut(s)	969, 1278, 1684
BspT107I	GGYRCC	2 cut(s)	861, 1170
BsrBI	CCGCTC	2 cut(s)	218, 1538
BsrDI	GCAATG	2 cut(s)	460, 1475
BsrGI	TGTACA	1 cut(s)	1551
BsrI	ACTGG	5 cut(s)	414, 1047, 1356, 1405, 1986
BssECI	CCNNGG	3 cut(s)	638, 1893, 2134
BssNI	GRCGYC	1 cut(s)	201
BssSI	CACGAG	1 cut(s)	1907
BssT1I	CCWWGG	1 cut(s)	638
Bst2BI	CACGAG	1 cut(s)	1907
Bst2UI	CCWGG	1 cut(s)	2136
Bst4CI	ACNGT	2 cut(s)	1766, 2049
Bst6I	CTCTTC	1 cut(s)	1651
BstACI	GRCGYC	1 cut(s)	201
BstAUI	TGTACA	1 cut(s)	1551
BstBI	TTCGAA	3 cut(s)	969, 1278, 1684
BstC8I	GCNNGC	5 cut(s)	758, 1443, 1447, 1494, 1957
BstDEI	CTNAG	1 cut(s)	208
BstF5I	GGATG	9 cut(s)	456, 658, 1053, 1362, 1790, 1806, 1891, 2089, 2116
BstFNI	CGCG	1 cut(s)	9
BstH2I	RGCGCY	2 cut(s)	821, 1130
BstHHI	GCGC	8 cut(s)	9, 262, 467, 820, 943, 1129, 1252, 1451
BstMWI	GCNNNNNNNGC	5 cut(s)	15, 152, 512, 920, 1229
BstNI	CCWGG	1 cut(s)	2136
BstNSI	RCATGY	5 cut(s)	678, 832, 1141, 1496, 1552
BstSCI	CCNGG	5 cut(s)	185, 320, 1892, 1893, 2134
BstSFI	CTRYAG	1 cut(s)	408
BstUI	CGCG	1 cut(s)	9
BstV1I	GCAGC	5 cut(s)	454, 541, 865, 1174, 1739
BstV2I	GAAGAC	2 cut(s)	1563, 1736
BstX2I	RGATCY	3 cut(s)	877, 1186, 1831
BstXI	CCANNNNNNTGG	1 cut(s)	1629
BstYI	RGATCY	3 cut(s)	877, 1186, 1831
BsuRI	GGCC	1 cut(s)	1997
BtgZI	GCGATG	1 cut(s)	326
BtsCI	GGATG	9 cut(s)	456, 658, 1053, 1362, 1790, 1806, 1891, 2089, 2116
BtsI	GCAGTG	3 cut(s)	950, 1259, 1522
BtsIMutI	CAGTG	8 cut(s)	421, 705, 950, 1011, 1259, 1320, 1522, 1771
BveI	ACCTGC	3 cut(s)	751, 1060, 1869
Cac8I	GCNNGC	5 cut(s)	758, 1443, 1447, 1494, 1957
CfoI	GCGC	8 cut(s)	9, 262, 467, 820, 943, 1129, 1252, 1451
Cfr13I	GGNCC	3 cut(s)	163, 894, 1203
Cfr9I	CCCGGG	1 cut(s)	1893
CseI	GACGC	1 cut(s)	236
Csp6I	GTAC	4 cut(s)	862, 1171, 1552, 1715
CviQI	GTAC	4 cut(s)	862, 1171, 1552, 1715
DdeI	CTNAG	1 cut(s)	208
DraI	TTTAAA	2 cut(s)	357, 1971
EaeI	YGGCCR	1 cut(s)	1995
Eam1104I	CTCTTC	1 cut(s)	1651
EarI	CTCTTC	1 cut(s)	1651
Eco130I	CCWWGG	1 cut(s)	638
Eco47I	GGWCC	3 cut(s)	163, 894, 1203
Eco47III	AGCGCT	2 cut(s)	819, 1128
Eco57I	CTGAAG	2 cut(s)	1005, 1314
Eco88I	CYCGRG	4 cut(s)	479, 857, 1166, 1893
EcoO109I	RGGNCCY	2 cut(s)	894, 1203
EcoRI	GAATTC	4 cut(s)	397, 694, 1015, 1324
EcoRII	CCWGG	1 cut(s)	2134
EcoT14I	CCWWGG	1 cut(s)	638
EcoT22I	ATGCAT	1 cut(s)	462
ErhI	CCWWGG	1 cut(s)	638
FaqI	GGGAC	1 cut(s)	1948
FauI	CCCGC	2 cut(s)	1022, 1331
FbaI	TGATCA	4 cut(s)	1023, 1332, 1693, 2113
FblI	GTMKAC	3 cut(s)	204, 825, 1134
Fnu4HI	GCNGC	5 cut(s)	468, 555, 854, 1163, 1728
FokI	GGATG	9 cut(s)	463, 665, 1060, 1369, 1797, 1813, 1898, 2096, 2123
Fsp4HI	GCNGC	5 cut(s)	468, 555, 854, 1163, 1728
FspI	TGCGCA	3 cut(s)	942, 1251, 1450
GlaI	GCGC	8 cut(s)	8, 261, 466, 819, 942, 1128, 1251, 1450
GluI	GCNGC	5 cut(s)	468, 555, 854, 1163, 1728
GsaI	CCCAGC	1 cut(s)	2067
HaeII	RGCGCY	2 cut(s)	821, 1130
HaeIII	GGCC	1 cut(s)	1997
HapII	CCGG	3 cut(s)	186, 321, 1894
HgaI	GACGC	1 cut(s)	236
HhaI	GCGC	8 cut(s)	9, 262, 467, 820, 943, 1129, 1252, 1451
Hin1I	GRCGYC	1 cut(s)	201
Hin6I	GCGC	8 cut(s)	7, 260, 465, 818, 941, 1127, 1250, 1449
HinP1I	GCGC	8 cut(s)	7, 260, 465, 818, 941, 1127, 1250, 1449
HincII	GTYRAC	2 cut(s)	826, 1135
HindII	GTYRAC	2 cut(s)	826, 1135
HindIII	AAGCTT	2 cut(s)	1059, 1368
HinfI	GANTC	8 cut(s)	980, 1001, 1289, 1310, 1454, 1595, 1673, 1961
HpaII	CCGG	3 cut(s)	186, 321, 1894
HphI	GGTGA	4 cut(s)	214, 484, 604, 695
Hpy166II	GTNNAC	6 cut(s)	166, 205, 307, 826, 1135, 1475
Hpy188III	TCNNGA	9 cut(s)	367, 583, 778, 881, 1190, 1926, 1976, 2041, 2124
Hpy8I	GTNNAC	6 cut(s)	166, 205, 307, 826, 1135, 1475
Hpy99I	CGWCG	3 cut(s)	203, 230, 278
HpyAV	CCTTC	6 cut(s)	436, 980, 1289, 1655, 1932, 2074
HpyCH4III	ACNGT	2 cut(s)	1766, 2049
HpyCH4IV	ACGT	1 cut(s)	201
HpyF10VI	GCNNNNNNNGC	5 cut(s)	15, 152, 512, 920, 1229
HpyF3I	CTNAG	1 cut(s)	208
HpySE526I	ACGT	1 cut(s)	201
Hsp92I	GRCGYC	1 cut(s)	201
HspAI	GCGC	8 cut(s)	7, 260, 465, 818, 941, 1127, 1250, 1449
KpnI	GGTACC	2 cut(s)	865, 1174
Ksp22I	TGATCA	4 cut(s)	1023, 1332, 1693, 2113
LmnI	GCTCC	3 cut(s)	141, 1414, 2136
Lsp1109I	GCAGC	5 cut(s)	454, 541, 865, 1174, 1739
LweI	GCATC	6 cut(s)	181, 247, 790, 1099, 1689, 2074
MaeII	ACGT	1 cut(s)	201
MaeIII	GTNAC	7 cut(s)	403, 431, 700, 1006, 1315, 1426, 1760
MbiI	CCGCTC	2 cut(s)	218, 1538
MboII	GAAGA	6 cut(s)	184, 581, 1563, 1668, 1718, 1736
MfeI	CAATTG	1 cut(s)	2153
MflI	RGATCY	3 cut(s)	877, 1186, 1831
MlsI	TGGCCA	1 cut(s)	1997
MluNI	TGGCCA	1 cut(s)	1997
MlyI	GAGTC	1 cut(s)	1970
MmeI	TCCRAC	3 cut(s)	222, 630, 1863
Mox20I	TGGCCA	1 cut(s)	1997
Mph1103I	ATGCAT	1 cut(s)	462
MscI	TGGCCA	1 cut(s)	1997
MseI	TTAA	8 cut(s)	356, 660, 993, 1302, 1383, 1772, 1901, 1970
MslI	CAYNNNNRTG	3 cut(s)	1491, 1547, 1553
Msp20I	TGGCCA	1 cut(s)	1997
MspA1I	CMGCKG	3 cut(s)	515, 1029, 1338
MspI	CCGG	3 cut(s)	186, 321, 1894
MspR9I	CCNGG	5 cut(s)	187, 322, 1894, 1895, 2136
MunI	CAATTG	1 cut(s)	2153
Mva1269I	GAATGC	7 cut(s)	462, 916, 943, 1225, 1252, 1395, 1639
MvaI	CCWGG	1 cut(s)	2136
MvnI	CGCG	1 cut(s)	9
MwoI	GCNNNNNNNGC	5 cut(s)	15, 152, 512, 920, 1229
NciI	CCSGG	4 cut(s)	187, 322, 1894, 1895
NlaIV	GGNNCC	3 cut(s)	636, 863, 1172
NmuCI	GTSAC	6 cut(s)	431, 700, 1006, 1315, 1426, 1760
NsbI	TGCGCA	3 cut(s)	942, 1251, 1450
NsiI	ATGCAT	1 cut(s)	462
NspI	RCATGY	5 cut(s)	678, 832, 1141, 1496, 1552
NspV	TTCGAA	3 cut(s)	969, 1278, 1684
PaeI	GCATGC	1 cut(s)	1496
PciI	ACATGT	3 cut(s)	828, 1137, 1548
PctI	GAATGC	7 cut(s)	462, 916, 943, 1225, 1252, 1395, 1639
PfeI	GAWTC	7 cut(s)	980, 1001, 1289, 1310, 1454, 1595, 1673
PkrI	GCNGC	5 cut(s)	469, 556, 855, 1164, 1729
PleI	GAGTC	1 cut(s)	1969
PpsI	GAGTC	1 cut(s)	1969
PpuMI	RGGWCCY	2 cut(s)	894, 1203
PscI	ACATGT	3 cut(s)	828, 1137, 1548
PsiI	TTATAA	2 cut(s)	611, 1739
Psp5II	RGGWCCY	2 cut(s)	894, 1203
Psp6I	CCWGG	1 cut(s)	2134
PspFI	CCCAGC	1 cut(s)	2063
PspGI	CCWGG	1 cut(s)	2134
PspN4I	GGNNCC	3 cut(s)	636, 863, 1172
PspPI	GGNCC	3 cut(s)	163, 894, 1203
PspPPI	RGGWCCY	2 cut(s)	894, 1203
PsuI	RGATCY	3 cut(s)	877, 1186, 1831
PvuII	CAGCTG	1 cut(s)	515
RsaI	GTAC	4 cut(s)	863, 1172, 1553, 1716
RsaNI	GTAC	4 cut(s)	862, 1171, 1552, 1715
RseI	CAYNNNNRTG	3 cut(s)	1491, 1547, 1553
SalI	GTCGAC	2 cut(s)	824, 1133
SaqAI	TTAA	8 cut(s)	356, 660, 993, 1302, 1383, 1772, 1901, 1970
SatI	GCNGC	5 cut(s)	468, 555, 854, 1163, 1728
Sau96I	GGNCC	3 cut(s)	163, 894, 1203
SchI	GAGTC	1 cut(s)	1970
ScrFI	CCNGG	5 cut(s)	187, 322, 1894, 1895, 2136
SfaNI	GCATC	6 cut(s)	181, 247, 790, 1099, 1689, 2074
SfcI	CTRYAG	1 cut(s)	408
SfuI	TTCGAA	3 cut(s)	969, 1278, 1684
SinI	GGWCC	3 cut(s)	163, 894, 1203
SmaI	CCCGGG	1 cut(s)	1895
SmiI	ATTTAAAT	1 cut(s)	1971
SmiMI	CAYNNNNRTG	3 cut(s)	1491, 1547, 1553
SmlI	CTYRAG	2 cut(s)	150, 263
SmoI	CTYRAG	2 cut(s)	150, 263
SpeI	ACTAGT	2 cut(s)	22, 1430
SphI	GCATGC	1 cut(s)	1496
SsiI	CCGC	7 cut(s)	78, 113, 216, 470, 1029, 1338, 1536
SspI	AATATT	1 cut(s)	1689
StyD4I	CCNGG	5 cut(s)	185, 320, 1892, 1893, 2134
StyI	CCWWGG	1 cut(s)	638
SwaI	ATTTAAAT	1 cut(s)	1971
TaaI	ACNGT	2 cut(s)	1766, 2049
TaiI	ACGT	1 cut(s)	204
TaqI	TCGA	9 cut(s)	273, 530, 825, 969, 1134, 1278, 1397, 1684, 1704
TaqII	GACCGA	1 cut(s)	303
TatI	WGTACW	2 cut(s)	1551, 1714
TfiI	GAWTC	7 cut(s)	980, 1001, 1289, 1310, 1454, 1595, 1673
Tru1I	TTAA	8 cut(s)	356, 660, 993, 1302, 1383, 1772, 1901, 1970
Tru9I	TTAA	8 cut(s)	356, 660, 993, 1302, 1383, 1772, 1901, 1970
TscAI	CASTG	8 cut(s)	421, 705, 950, 1011, 1259, 1320, 1522, 1771
TseFI	GTSAC	6 cut(s)	431, 700, 1006, 1315, 1426, 1760
TseI	GCWGC	5 cut(s)	467, 554, 853, 1162, 1727
Tsp45I	GTSAC	6 cut(s)	431, 700, 1006, 1315, 1426, 1760
TspMI	CCCGGG	1 cut(s)	1893
TspRI	CASTG	8 cut(s)	421, 705, 950, 1011, 1259, 1320, 1522, 1771
VpaK11BI	GGWCC	3 cut(s)	163, 894, 1203
XapI	RAATTY	8 cut(s)	98, 397, 694, 867, 1015, 1176, 1324, 1791
XbaI	TCTAGA	3 cut(s)	880, 1189, 1975
XceI	RCATGY	5 cut(s)	678, 832, 1141, 1496, 1552
XmaI	CCCGGG	1 cut(s)	1893
XmiI	GTMKAC	3 cut(s)	204, 825, 1134
ZraI	GACGTC	1 cut(s)	202
Zsp2I	ATGCAT	1 cut(s)	462

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.