Pentatricopeptide repeat domain
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 92 |
| AcsI | RAATTY | 1 cut(s) | 190 |
| AflII | CTTAAG | 1 cut(s) | 148 |
| AgsI | TTSAA | 2 cut(s) | 60, 190 |
| AhlI | ACTAGT | 1 cut(s) | 68 |
| AoxI | GGCC | 2 cut(s) | 92, 276 |
| ApoI | RAATTY | 1 cut(s) | 190 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 253 |
| AspS9I | GGNCC | 1 cut(s) | 277 |
| BalI | TGGCCA | 1 cut(s) | 94 |
| BccI | CCATC | 3 cut(s) | 78, 235, 292 |
| BcuI | ACTAGT | 1 cut(s) | 68 |
| BfaI | CTAG | 1 cut(s) | 69 |
| BfrI | CTTAAG | 1 cut(s) | 148 |
| BmgT120I | GGNCC | 1 cut(s) | 277 |
| Bse3DI | GCAATG | 1 cut(s) | 157 |
| BseGI | GGATG | 1 cut(s) | 89 |
| BseMI | GCAATG | 1 cut(s) | 157 |
| BseMII | CTCAG | 2 cut(s) | 5, 260 |
| BshFI | GGCC | 2 cut(s) | 94, 278 |
| BsnI | GGCC | 2 cut(s) | 94, 278 |
| BspANI | GGCC | 2 cut(s) | 94, 278 |
| BspCNI | CTCAG | 2 cut(s) | 6, 261 |
| BspTI | CTTAAG | 1 cut(s) | 148 |
| BsrDI | GCAATG | 1 cut(s) | 157 |
| Bst4CI | ACNGT | 1 cut(s) | 109 |
| BstAFI | CTTAAG | 1 cut(s) | 148 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 251 |
| BstDEI | CTNAG | 2 cut(s) | 14, 269 |
| BstF5I | GGATG | 1 cut(s) | 89 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 251 |
| BsuRI | GGCC | 2 cut(s) | 94, 278 |
| BtsCI | GGATG | 1 cut(s) | 89 |
| BtsIMutI | CAGTG | 1 cut(s) | 266 |
| Cfr13I | GGNCC | 1 cut(s) | 277 |
| CviAII | CATG | 1 cut(s) | 40 |
| CviJI | RGCY | 3 cut(s) | 94, 278, 294 |
| CviKI_1 | RGCY | 3 cut(s) | 94, 278, 294 |
| DdeI | CTNAG | 2 cut(s) | 14, 269 |
| EaeI | YGGCCR | 1 cut(s) | 92 |
| Eco32I | GATATC | 1 cut(s) | 264 |
| EcoO109I | RGGNCCY | 1 cut(s) | 277 |
| EcoRV | GATATC | 1 cut(s) | 264 |
| FaeI | CATG | 1 cut(s) | 43 |
| FaiI | YATR | 4 cut(s) | 41, 304, 306, 322 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 238, 270 |
| FatI | CATG | 1 cut(s) | 39 |
| FokI | GGATG | 1 cut(s) | 96 |
| FspBI | CTAG | 1 cut(s) | 69 |
| HaeIII | GGCC | 2 cut(s) | 94, 278 |
| Hin1II | CATG | 1 cut(s) | 43 |
| HinfI | GANTC | 2 cut(s) | 4, 153 |
| Hpy188I | TCNGA | 2 cut(s) | 119, 226 |
| Hpy188III | TCNNGA | 1 cut(s) | 13 |
| HpyAV | CCTTC | 2 cut(s) | 35, 268 |
| HpyCH4III | ACNGT | 1 cut(s) | 109 |
| HpyCH4V | TGCA | 1 cut(s) | 162 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 251 |
| HpyF3I | CTNAG | 2 cut(s) | 14, 269 |
| Hsp92II | CATG | 1 cut(s) | 43 |
| LpnPI | CCDG | 3 cut(s) | 26, 66, 243 |
| MaeI | CTAG | 1 cut(s) | 69 |
| MboII | GAAGA | 1 cut(s) | 250 |
| MlsI | TGGCCA | 1 cut(s) | 94 |
| MluCI | AATT | 1 cut(s) | 190 |
| MluNI | TGGCCA | 1 cut(s) | 94 |
| MlyI | GAGTC | 2 cut(s) | 13, 162 |
| MnlI | CCTC | 3 cut(s) | 70, 189, 264 |
| Mox20I | TGGCCA | 1 cut(s) | 94 |
| MroXI | GAANNNNTTC | 1 cut(s) | 253 |
| MscI | TGGCCA | 1 cut(s) | 94 |
| MseI | TTAA | 1 cut(s) | 149 |
| Msp20I | TGGCCA | 1 cut(s) | 94 |
| MspCI | CTTAAG | 1 cut(s) | 148 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 251 |
| NlaIII | CATG | 1 cut(s) | 43 |
| PdmI | GAANNNNTTC | 1 cut(s) | 253 |
| PleI | GAGTC | 2 cut(s) | 12, 161 |
| PpsI | GAGTC | 2 cut(s) | 12, 161 |
| PspPI | GGNCC | 1 cut(s) | 277 |
| SaqAI | TTAA | 1 cut(s) | 149 |
| Sau96I | GGNCC | 1 cut(s) | 277 |
| SchI | GAGTC | 2 cut(s) | 13, 162 |
| SetI | ASST | 1 cut(s) | 149 |
| SmlI | CTYRAG | 1 cut(s) | 148 |
| SmoI | CTYRAG | 1 cut(s) | 148 |
| SpeI | ACTAGT | 1 cut(s) | 68 |
| Sse9I | AATT | 1 cut(s) | 190 |
| SspMI | CTAG | 1 cut(s) | 69 |
| TaaI | ACNGT | 1 cut(s) | 109 |
| TaqI | TCGA | 2 cut(s) | 167, 215 |
| TasI | AATT | 1 cut(s) | 190 |
| Tru1I | TTAA | 1 cut(s) | 149 |
| Tru9I | TTAA | 1 cut(s) | 149 |
| TscAI | CASTG | 1 cut(s) | 273 |
| TspDTI | ATGAA | 2 cut(s) | 17, 196 |
| TspRI | CASTG | 1 cut(s) | 273 |
| Vha464I | CTTAAG | 1 cut(s) | 148 |
| XapI | RAATTY | 1 cut(s) | 190 |
| XmnI | GAANNNNTTC | 1 cut(s) | 253 |
| XspI | CTAG | 1 cut(s) | 69 |