Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0001126

Physical Location & Seq

Genomic Coordinates Reverse (-)

762792 .. 767112

Gene Structure 4321 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0009200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1419 bp

ATGGCGTTAGTACATAGCAACAGTAGCGCTACCATTATGATCTTCTTTTACTCCATATTAGTGTTCATGTTATCTCTAACAACCACCACCATCAATGTGGCTGCGACGGCGAAAGAGCAAGAGCTAGACCGAATCTCAGCGCTGCCGGGACAACCGCCGGTTTCGTTCTCGCAGTATTCTGGTTACGTCACCGTCAACGAGAAACATGGCCGAGCTCTCTTCTACTGGTTCATTGAAGCCACTGCTTCTCCTCAGAACAAACCTCTCGTTCTTTGGCTCAATGGAGGACCAGGTTGTTCATCAGTGGCATATGGAGCATCAGAAGAAATCGGCCCGTTTCGGATTAATACAACCGGTTCATCTCTTTATCTCAACAAGTATTCATGGAACAGAGAAGCGAATATTCTCTTTCTTGAATCGCCTGCTGGTGTCGGTTTCTCATATACAAACACAAGCGCTGACCTTAAAGATTCTGGGGACAAAAGGACTGCTCAGGATGCTCTAACTTTTCTGCTCCAGTGGTTATCAAGATTTCCTCAATACAAATACAGAGAATTCTACATTTCCGGGGAGAGCTATGCAGGGCATTATGTTCCTCAGTTGGCAAAGGAAATTGTCAATTACAATAAAGCACATTCCCATCCCATTATCAATCTAAAGGGGTTTATTGTGGGCAATGCTGTAACAGACAACTATTATGATAGCATTGGAACCGTCGCATATTGGTGGACACATTCCATAATATCTGATCACACCTACAGATCAATCCTCGACCATTGCAATTTCACAGCCGATAAATCAACCACGCAATGCGATGATGCTGTAGATTATGCCATGAACCACGAATTTGGAGACATTGACCAGTACAGTATTTACACACCATTTTGCTTGACACAGATTAATAACGCCAAAAGGCATCTAAGGCTTAAAAACACTCTTCTGCGCCGACGTATCTCTGGGTATGATCCGTGCACTGAGAATTATGCAGAGAAGTACTATAATCGGCCAGATGTACAGAAGGCAATGCATGCAAATATTACCAAAATTCCTTACAAGTGGACTGCTTGCAGTGATACTCTTATCAAGAATTGGAATGATTCAGAAGATTCCATGCTGCCTACATACAAGGAGCTGATGGCAGCTGGTCTAAAAATTTGGGTTTTCAGCGGGGACACAGATTCAGTAGTACCAGTGACTGCTACTAGGTTCTCCCTCAGTCATCTCAACCTTACTATCAAAACCCCATGGTATCCATGGTACACAGGAGGCCAGGTGGGAGGATGGACAGAAGTCTACTATGGCTTAACCTTTGCAACTATACGAGGTGCTGGCCACGAGGTTCCACTGTTTAAACCAAAGAGAGCTTTCGTGCTTTTCCAATCATTTTTAGCAGGAAAACAATTGCCAAGACCTAATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

472

Amino Acids

53.41

Weight (kDa)

8.04

Isoelectric Point (pI)

42.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_S10	PF00450	49 - 464	8e-151	Serine carboxypeptidase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001126)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G02750
fragaria_vesca	FvH4_4g31750 FvH4_4g31750 FvH4_4g31750
malus_domestica	MD16G1077500.v1.1
prunus_persica	Prupe.1G269600_v2.0.a1
pyrus_communis	pycom16g06680
rosa_chinensis	RchiOBHm_Chr3g0480041 RchiOBHm_Chr4g0440351 RchiOBHm_Chr5g0020671 RchiOBHm_Chr5g0027821 RchiOBHm_Chr5g0045351 RchiOBHm_Chr5g0062441 RchiOBHm_Chr6g0278731
rosa_laevigata	RLG00000006189 RLG00000009789 RLG00000009916 RLG00000013392 RLG00000013526 RLG00000013972 RLG00000020257 RLG00000031746 RLG00000031753 RLG00000033045 RLG00000033161
rosa_multiflora	Rmu_co8052728.1_g000001 Rmu_sc0001159.1_g000033 Rmu_sc0001685.1_g000045 Rmu_sc0003684.1_g000002 Rmu_sc0004520.1_g000016 Rmu_sc0012764.1_g000009 Rmu_sc0017399.1_g000002
rosa_roxburghii	Rroxscaffold_5G00343960 Rroxscaffold_5G00381230
rosa_rugosa	Rorug02G0009200 Rorug04G0056800 Rorug04G0056900 Rorug04G0325800 Rorug04G0335700
rosa_samantha	Rh2BG469200 Rh3CG261100 Rh3DG257000 Rh4AG376800 Rh4BG090100 Rh4BG389800 Rh4CG404600 Rh4DG383500 Rh5AG303800 Rh5AG409600 Rh5BG076900 Rh5BG193800 Rh5BG193900 Rh5BG199300 Rh5CG163100 Rh5CG214100 Rh5DG322500 Rh7BG133700
rosa_wichuraiana	Rw4G032260

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	1293
AciI	CCGC	2 cut(s)	155, 1167
AclWI	GGATC	1 cut(s)	959
AcoI	YGGCCR	3 cut(s)	208, 1004, 1330
AcsI	RAATTY	4 cut(s)	554, 845, 1044, 1152
AfaI	GTAC	6 cut(s)	12, 866, 995, 1014, 1188, 1259
AfeI	AGCGCT	3 cut(s)	28, 141, 457
AgeI	ACCGGT	1 cut(s)	353
AgsI	TTSAA	2 cut(s)	236, 416
AjnI	CCWGG	2 cut(s)	289, 1269
AluBI	AGCT	6 cut(s)	124, 215, 576, 1132, 1142, 1364
AluI	AGCT	6 cut(s)	124, 215, 576, 1132, 1142, 1364
Alw21I	GWGCWC	2 cut(s)	217, 974
Alw26I	GTCTC	1 cut(s)	846
Alw44I	GTGCAC	1 cut(s)	970
AlwI	GGATC	1 cut(s)	959
AlwNI	CAGNNNCTG	1 cut(s)	1196
Aor51HI	AGCGCT	3 cut(s)	28, 141, 457
AoxI	GGCC	5 cut(s)	208, 331, 1004, 1267, 1330
ApaLI	GTGCAC	1 cut(s)	970
ApeKI	GCWGC	4 cut(s)	101, 142, 1114, 1139
ApoI	RAATTY	4 cut(s)	554, 845, 1044, 1152
AseI	ATTAAT	2 cut(s)	345, 900
AsiGI	ACCGGT	1 cut(s)	353
AspLEI	GCGC	4 cut(s)	29, 142, 458, 945
AspS9I	GGNCC	2 cut(s)	287, 332
AsuC2I	CCSGG	2 cut(s)	147, 568
AsuHPI	GGTGA	1 cut(s)	181
AvaII	GGWCC	1 cut(s)	287
BaeGI	GKGCMC	1 cut(s)	974
BalI	TGGCCA	1 cut(s)	1332
BanII	GRGCYC	1 cut(s)	217
BauI	CACGAG	1 cut(s)	1334
Bbv12I	GWGCWC	2 cut(s)	217, 974
BbvI	GCAGC	4 cut(s)	88, 129, 1101, 1151
BccI	CCATC	4 cut(s)	98, 648, 1129, 1275
BceAI	ACGGC	1 cut(s)	123
BciT130I	CCWGG	2 cut(s)	291, 1271
BciVI	GTATCC	1 cut(s)	1260
BclI	TGATCA	1 cut(s)	748
BcnI	CCSGG	2 cut(s)	147, 568
BcoDI	GTCTC	1 cut(s)	846
BfaI	CTAG	2 cut(s)	125, 1203
BfmI	CTRYAG	2 cut(s)	757, 822
BfoI	RGCGCY	3 cut(s)	30, 143, 459
BfuI	GTATCC	1 cut(s)	1260
BisI	GCNGC	4 cut(s)	102, 143, 1115, 1140
BlsI	GCNGC	4 cut(s)	103, 144, 1116, 1141
BmcAI	AGTACT	1 cut(s)	995
Bme1390I	CCNGG	4 cut(s)	147, 291, 568, 1271
Bme18I	GGWCC	1 cut(s)	287
BmgT120I	GGNCC	2 cut(s)	287, 332
BmiI	GGNNCC	2 cut(s)	712, 1341
BmrFI	CCNGG	4 cut(s)	147, 291, 568, 1271
BmsI	GCATC	4 cut(s)	326, 487, 808, 925
BoxI	GACNNNNGTC	1 cut(s)	1289
BpmI	CTGGAG	1 cut(s)	500
Bpu10I	CCTNAGC	1 cut(s)	492
BpuMI	CCSGG	2 cut(s)	147, 568
BsaJI	CCNNGG	3 cut(s)	567, 1244, 1253
BsaWI	WCCGGW	1 cut(s)	353
BsaXI	ACNNNNNCTCC	4 cut(s)	232, 262, 1257, 1287
Bse118I	RCCGGY	2 cut(s)	157, 353
Bse1I	ACTGG	4 cut(s)	230, 517, 862, 1190
Bse3DI	GCAATG	4 cut(s)	682, 775, 815, 1029
BseBI	CCWGG	2 cut(s)	291, 1271
BseDI	CCNNGG	3 cut(s)	567, 1244, 1253
BseGI	GGATG	3 cut(s)	502, 640, 1286
BseMI	GCAATG	4 cut(s)	682, 775, 815, 1029
BseMII	CTCAG	6 cut(s)	150, 266, 506, 611, 966, 1228
BseNI	ACTGG	4 cut(s)	230, 517, 862, 1190
BseRI	GAGGAG	1 cut(s)	240
BseSI	GKGCMC	1 cut(s)	974
BseXI	GCAGC	4 cut(s)	88, 129, 1101, 1151
BshFI	GGCC	5 cut(s)	210, 333, 1006, 1269, 1332
BshTI	ACCGGT	1 cut(s)	353
BsiHKAI	GWGCWC	2 cut(s)	217, 974
BsiSI	CCGG	4 cut(s)	146, 158, 354, 567
BslFI	GGGAC	3 cut(s)	162, 491, 1184
BsmAI	GTCTC	1 cut(s)	846
BsmFI	GGGAC	3 cut(s)	162, 491, 1184
BsnI	GGCC	5 cut(s)	210, 333, 1006, 1269, 1332
Bsp1286I	GDGCHC	2 cut(s)	217, 974
Bsp1407I	TGTACA	1 cut(s)	1012
Bsp143I	GATC	4 cut(s)	39, 748, 761, 964
Bsp19I	CCATGG	2 cut(s)	1244, 1253
BspACI	CCGC	2 cut(s)	155, 1167
BspANI	GGCC	5 cut(s)	210, 333, 1006, 1269, 1332
BspCNI	CTCAG	6 cut(s)	149, 265, 505, 610, 967, 1227
BspLI	GGNNCC	2 cut(s)	712, 1341
BspPI	GGATC	1 cut(s)	959
BsrDI	GCAATG	4 cut(s)	682, 775, 815, 1029
BsrFI	RCCGGY	2 cut(s)	157, 353
BsrGI	TGTACA	1 cut(s)	1012
BsrI	ACTGG	4 cut(s)	230, 517, 862, 1190
BssAI	RCCGGY	2 cut(s)	157, 353
BssECI	CCNNGG	3 cut(s)	567, 1244, 1253
BssMI	GATC	4 cut(s)	39, 748, 761, 964
BssSI	CACGAG	1 cut(s)	1334
BssT1I	CCWWGG	2 cut(s)	1244, 1253
Bst2BI	CACGAG	1 cut(s)	1334
Bst2UI	CCWGG	2 cut(s)	291, 1271
Bst4CI	ACNGT	5 cut(s)	23, 193, 715, 869, 1347
Bst6I	CTCTTC	2 cut(s)	224, 942
BstAPI	GCANNNNNTGC	1 cut(s)	1028
BstAUI	TGTACA	1 cut(s)	1012
BstC8I	GCNNGC	4 cut(s)	423, 1029, 1066, 1330
BstDEI	CTNAG	7 cut(s)	136, 252, 492, 597, 920, 975, 1214
BstDSI	CCRYGG	2 cut(s)	1244, 1253
BstF5I	GGATG	3 cut(s)	502, 640, 1286
BstH2I	RGCGCY	3 cut(s)	30, 143, 459
BstHHI	GCGC	4 cut(s)	29, 142, 458, 945
BstKTI	GATC	4 cut(s)	42, 751, 764, 967
BstMAI	GTCTC	1 cut(s)	846
BstMBI	GATC	4 cut(s)	39, 748, 761, 964
BstMWI	GCNNNNNNNGC	6 cut(s)	24, 107, 314, 497, 922, 1028
BstNI	CCWGG	2 cut(s)	291, 1271
BstNSI	RCATGY	1 cut(s)	1031
BstPAI	GACNNNNGTC	1 cut(s)	1289
BstSCI	CCNGG	4 cut(s)	145, 289, 566, 1269
BstSFI	CTRYAG	2 cut(s)	757, 822
BstSLI	GKGCMC	1 cut(s)	974
BstV1I	GCAGC	4 cut(s)	88, 129, 1101, 1151
BstXI	CCANNNNNNTGG	2 cut(s)	97, 848
BsuI	GTATCC	1 cut(s)	1260
BsuRI	GGCC	5 cut(s)	210, 333, 1006, 1269, 1332
BtgI	CCRYGG	2 cut(s)	1244, 1253
BtgZI	GCGATG	1 cut(s)	828
BtsCI	GGATG	3 cut(s)	502, 640, 1286
BtsI	GCAGTG	2 cut(s)	240, 1075
BtsIMutI	CAGTG	7 cut(s)	240, 309, 524, 972, 1075, 1197, 1343
Cac8I	GCNNGC	4 cut(s)	423, 1029, 1066, 1330
CaiI	CAGNNNCTG	1 cut(s)	1196
CfoI	GCGC	4 cut(s)	29, 142, 458, 945
Cfr10I	RCCGGY	2 cut(s)	157, 353
Cfr13I	GGNCC	2 cut(s)	287, 332
CsiI	ACCWGGT	1 cut(s)	289
Csp6I	GTAC	6 cut(s)	11, 865, 994, 1013, 1187, 1258
CspAI	ACCGGT	1 cut(s)	353
CviAII	CATG	8 cut(s)	67, 206, 384, 835, 1028, 1111, 1245, 1254
CviQI	GTAC	6 cut(s)	11, 865, 994, 1013, 1187, 1258
DdeI	CTNAG	7 cut(s)	136, 252, 492, 597, 920, 975, 1214
DpnI	GATC	4 cut(s)	41, 750, 763, 966
DpnII	GATC	4 cut(s)	39, 748, 761, 964
DraI	TTTAAA	1 cut(s)	1351
EaeI	YGGCCR	3 cut(s)	208, 1004, 1330
Eam1104I	CTCTTC	2 cut(s)	224, 942
EarI	CTCTTC	2 cut(s)	224, 942
Ecl136II	GAGCTC	1 cut(s)	215
Eco130I	CCWWGG	2 cut(s)	1244, 1253
Eco24I	GRGCYC	1 cut(s)	217
Eco47I	GGWCC	1 cut(s)	287
Eco47III	AGCGCT	3 cut(s)	28, 141, 457
Eco53kI	GAGCTC	1 cut(s)	215
EcoICRI	GAGCTC	1 cut(s)	215
EcoRI	GAATTC	1 cut(s)	554
EcoRII	CCWGG	2 cut(s)	289, 1269
EcoT14I	CCWWGG	2 cut(s)	1244, 1253
EcoT22I	ATGCAT	1 cut(s)	1029
EcoT38I	GRGCYC	1 cut(s)	217
ErhI	CCWWGG	2 cut(s)	1244, 1253
FaeI	CATG	8 cut(s)	70, 209, 387, 838, 1031, 1114, 1248, 1257
FaqI	GGGAC	3 cut(s)	162, 491, 1184
FatI	CATG	8 cut(s)	66, 205, 383, 834, 1027, 1110, 1244, 1253
FauI	CCCGC	1 cut(s)	1160
FauNDI	CATATG	1 cut(s)	310
FbaI	TGATCA	1 cut(s)	748
FblI	GTMKAC	1 cut(s)	1293
Fnu4HI	GCNGC	4 cut(s)	102, 143, 1115, 1140
FokI	GGATG	3 cut(s)	509, 627, 1293
FriOI	GRGCYC	1 cut(s)	217
Fsp4HI	GCNGC	4 cut(s)	102, 143, 1115, 1140
FspBI	CTAG	2 cut(s)	125, 1203
GlaI	GCGC	4 cut(s)	28, 141, 457, 944
GluI	GCNGC	4 cut(s)	102, 143, 1115, 1140
GsuI	CTGGAG	1 cut(s)	500
HaeII	RGCGCY	3 cut(s)	30, 143, 459
HaeIII	GGCC	5 cut(s)	210, 333, 1006, 1269, 1332
HapII	CCGG	4 cut(s)	146, 158, 354, 567
HhaI	GCGC	4 cut(s)	29, 142, 458, 945
Hin1II	CATG	8 cut(s)	70, 209, 387, 838, 1031, 1114, 1248, 1257
Hin6I	GCGC	4 cut(s)	27, 140, 456, 943
HinP1I	GCGC	4 cut(s)	27, 140, 456, 943
HincII	GTYRAC	1 cut(s)	196
HindII	GTYRAC	1 cut(s)	196
HinfI	GANTC	6 cut(s)	132, 416, 470, 1097, 1106, 1178
HpaII	CCGG	4 cut(s)	146, 158, 354, 567
HphI	GGTGA	1 cut(s)	181
Hpy166II	GTNNAC	6 cut(s)	196, 729, 972, 1059, 1260, 1294
Hpy188I	TCNGA	5 cut(s)	255, 322, 342, 748, 1102
Hpy188III	TCNNGA	4 cut(s)	413, 494, 528, 1084
Hpy8I	GTNNAC	6 cut(s)	196, 729, 972, 1059, 1260, 1294
Hpy99I	CGWCG	3 cut(s)	109, 719, 951
HpyAV	CCTTC	1 cut(s)	1012
HpyCH4III	ACNGT	5 cut(s)	23, 193, 715, 869, 1347
HpyCH4IV	ACGT	2 cut(s)	186, 949
HpyCH4V	TGCA	8 cut(s)	581, 780, 972, 986, 1027, 1031, 1068, 1313
HpyF10VI	GCNNNNNNNGC	6 cut(s)	24, 107, 314, 497, 922, 1028
HpyF3I	CTNAG	7 cut(s)	136, 252, 492, 597, 920, 975, 1214
HpySE526I	ACGT	2 cut(s)	186, 949
Hsp92II	CATG	8 cut(s)	70, 209, 387, 838, 1031, 1114, 1248, 1257
HspAI	GCGC	4 cut(s)	27, 140, 456, 943
Ksp22I	TGATCA	1 cut(s)	748
Kzo9I	GATC	4 cut(s)	39, 748, 761, 964
LmnI	GCTCC	3 cut(s)	314, 519, 1129
Lsp1109I	GCAGC	4 cut(s)	88, 129, 1101, 1151
LweI	GCATC	4 cut(s)	326, 487, 808, 925
MabI	ACCWGGT	1 cut(s)	289
MaeI	CTAG	2 cut(s)	125, 1203
MaeII	ACGT	2 cut(s)	186, 949
MaeIII	GTNAC	4 cut(s)	182, 187, 682, 1192
MalI	GATC	4 cut(s)	41, 750, 763, 966
MboI	GATC	4 cut(s)	39, 748, 761, 964
MboII	GAAGA	5 cut(s)	34, 211, 335, 929, 1115
MfeI	CAATTG	1 cut(s)	1400
MhlI	GDGCHC	2 cut(s)	217, 974
MlsI	TGGCCA	1 cut(s)	1332
MluNI	TGGCCA	1 cut(s)	1332
Mox20I	TGGCCA	1 cut(s)	1332
Mph1103I	ATGCAT	1 cut(s)	1029
MscI	TGGCCA	1 cut(s)	1332
MseI	TTAA	6 cut(s)	345, 465, 900, 927, 1304, 1350
MslI	CAYNNNNRTG	3 cut(s)	59, 95, 724
Msp20I	TGGCCA	1 cut(s)	1332
MspA1I	CMGCKG	2 cut(s)	1142, 1167
MspI	CCGG	4 cut(s)	146, 158, 354, 567
MspR9I	CCNGG	4 cut(s)	147, 291, 568, 1271
MssI	GTTTAAAC	1 cut(s)	1351
MunI	CAATTG	1 cut(s)	1400
MvaI	CCWGG	2 cut(s)	291, 1271
MwoI	GCNNNNNNNGC	6 cut(s)	24, 107, 314, 497, 922, 1028
NciI	CCSGG	2 cut(s)	147, 568
NcoI	CCATGG	2 cut(s)	1244, 1253
NdeI	CATATG	1 cut(s)	310
NdeII	GATC	4 cut(s)	39, 748, 761, 964
NlaIII	CATG	8 cut(s)	70, 209, 387, 838, 1031, 1114, 1248, 1257
NlaIV	GGNNCC	2 cut(s)	712, 1341
NmeAIII	GCCGAG	1 cut(s)	236
NmuCI	GTSAC	2 cut(s)	187, 1192
NsiI	ATGCAT	1 cut(s)	1029
NspI	RCATGY	1 cut(s)	1031
PaeI	GCATGC	1 cut(s)	1031
PfeI	GAWTC	6 cut(s)	132, 416, 470, 1097, 1106, 1178
PinAI	ACCGGT	1 cut(s)	353
PkrI	GCNGC	4 cut(s)	103, 144, 1116, 1141
PmeI	GTTTAAAC	1 cut(s)	1351
PshAI	GACNNNNGTC	1 cut(s)	1289
PshBI	ATTAAT	2 cut(s)	345, 900
Psp124BI	GAGCTC	1 cut(s)	217
Psp6I	CCWGG	2 cut(s)	289, 1269
PspGI	CCWGG	2 cut(s)	289, 1269
PspN4I	GGNNCC	2 cut(s)	712, 1341
PspPI	GGNCC	2 cut(s)	287, 332
PstNI	CAGNNNCTG	1 cut(s)	1196
PvuII	CAGCTG	1 cut(s)	1142
RsaI	GTAC	6 cut(s)	12, 866, 995, 1014, 1188, 1259
RsaNI	GTAC	6 cut(s)	11, 865, 994, 1013, 1187, 1258
RseI	CAYNNNNRTG	3 cut(s)	59, 95, 724
SacI	GAGCTC	1 cut(s)	217
SaqAI	TTAA	6 cut(s)	345, 465, 900, 927, 1304, 1350
SatI	GCNGC	4 cut(s)	102, 143, 1115, 1140
Sau3AI	GATC	4 cut(s)	39, 748, 761, 964
Sau96I	GGNCC	2 cut(s)	287, 332
ScaI	AGTACT	1 cut(s)	995
ScrFI	CCNGG	4 cut(s)	147, 291, 568, 1271
SduI	GDGCHC	2 cut(s)	217, 974
SexAI	ACCWGGT	1 cut(s)	289
SfaNI	GCATC	4 cut(s)	326, 487, 808, 925
SfcI	CTRYAG	2 cut(s)	757, 822
SinI	GGWCC	1 cut(s)	287
SmiMI	CAYNNNNRTG	3 cut(s)	59, 95, 724
SphI	GCATGC	1 cut(s)	1031
SsiI	CCGC	2 cut(s)	155, 1167
SspI	AATATT	2 cut(s)	403, 1036
SspMI	CTAG	2 cut(s)	125, 1203
SstI	GAGCTC	1 cut(s)	217
StyD4I	CCNGG	4 cut(s)	145, 289, 566, 1269
StyI	CCWWGG	2 cut(s)	1244, 1253
TaaI	ACNGT	5 cut(s)	23, 193, 715, 869, 1347
TaiI	ACGT	2 cut(s)	189, 952
TaqI	TCGA	1 cut(s)	771
TaqII	GACCGA	1 cut(s)	144
TatI	WGTACW	4 cut(s)	10, 864, 993, 1012
TfiI	GAWTC	6 cut(s)	132, 416, 470, 1097, 1106, 1178
Tru1I	TTAA	6 cut(s)	345, 465, 900, 927, 1304, 1350
Tru9I	TTAA	6 cut(s)	345, 465, 900, 927, 1304, 1350
TscAI	CASTG	7 cut(s)	247, 309, 524, 979, 1075, 1197, 1350
TseFI	GTSAC	2 cut(s)	187, 1192
TseI	GCWGC	4 cut(s)	101, 142, 1114, 1139
Tsp45I	GTSAC	2 cut(s)	187, 1192
TspDTI	ATGAA	6 cut(s)	55, 220, 288, 348, 372, 851
TspGWI	ACGGA	1 cut(s)	957
TspRI	CASTG	7 cut(s)	247, 309, 524, 979, 1075, 1197, 1350
VneI	GTGCAC	1 cut(s)	970
VpaK11BI	GGWCC	1 cut(s)	287
VspI	ATTAAT	2 cut(s)	345, 900
XapI	RAATTY	4 cut(s)	554, 845, 1044, 1152
XceI	RCATGY	1 cut(s)	1031
XcmI	CCANNNNNNNNNTGG	2 cut(s)	94, 1251
XmiI	GTMKAC	1 cut(s)	1293
XspI	CTAG	2 cut(s)	125, 1203
ZrmI	AGTACT	1 cut(s)	995
Zsp2I	ATGCAT	1 cut(s)	1029

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.