FvH4_5g36800

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000630
Physical Location & Seq
Reverse (-)
26968166 .. 26976281
8116 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g36800.t4

Sequence Viewer

Length: 2538 bp
ATGGAGATTTACGAAGCCCCTCCGTTCCGGCCCAGAGATCGCCGGCCCAATGCCCTCGGGAACTTGCTGGTCCTCCCCGACGAGCTCATCTGCGCCGTCTTGGAGCTGCTCTCTCCTCGCGACGTCGCTCGCCTCTCCTGCGTTAGCAGTGTGATGTATATATTTTGCAATGAAGAGCCTCTCTGGCTGAGTATATGCCTCAACACGCTTAATGGTCCGCTCCAGTACAAAGGCTCCTGGAAGAAGACGGTGCTGCATTTGGAGAATGTGCCGTATGAACGCGACAAGGATGGCAGGAAACCACTGAGTTTTGATGGATTCGACTCTTTATTTTTGTACAGAAGATTATACCGGTGTCATACCACATTGGATGGTTTTTCTTTTGACAATGGGAATGTGGAAAGAAAGGACAAGATTACCGTGGAAGAGTTTTCTTGTGACTATGATGGGAAGAAACCGGTTTTGCTCGCTGGATTAGCTGATGCATGGCCTGCAAGGCGTACATGGACACTTGACCACTTATTGCAGAATTATGGAGATACAGCTTTCAAGATTTCTCAAAGGAGCTCACGTAAAGTTTCAATGACATTCAAGGACTATGTTTCATATATGAAAGCTCAGCATGATGAGGATCCGCTTTATATCTTTGATCACAAGTTCGGGGAGGTTGAACCTGGCTTGTTGAAAGATTACAGTGTACCTTATCTATTTCAAGAGGACTACTTTGATGTTTTGGACAAAGATAAGCGACCTCCATTTAGATGGCTCATTATTGGTCCGCAGAGGTCTGGTGCTTCTTGGCATGTTGATCCAGCTCTGACCAGTGCCTGGAATACACTTCTATGTGGTCGTAAAAGGTGGGCCTTGTATCCTCCAGGAAGAGTACCTATAGGTGTCACAGTACATGTAAATGAAGACGACGGTGATGTCAATATCGAAACTCCAACTTCATTGCAGTGGTGGCTAGATTTTTATCCCCTTCTTGCTGATGAAGACAAGCCCATAGAGTGCACCCAACTGCCTGGGGAGACGATTTTCGTTCCGAGCGGATGGTGGCACTGTGTCCTAAATCTTGAACCATCTATTGCTGTTACCCAGAACTTTGTAAATTCTAAGAACTTTGAATTTGTGTGCTTGGATATGGCACCTGGTTATCGTCATAAGGGAGTTTGCCGTGCTGGATTACTTGCAGATGATGAAGGCATCATTGAGGATTCCACTCACATACCCTATGATAAAGATGATTATAATTCCTCAGATATGACTAGGAAAGTAAAAAGAGTCAGAACTCTCAAACCTGGAGAATATCCAAGTAGTGAAAGAACTAGTAATGGTGCTCAGGGTTTTTCTTATGATGTAAATTTCTTAGCCATGTATCTGGATGAAGAGAGAGATCATTATAACGCTCCTTGGAGCTCAGGCAATTGCATAGGGCAAAGAGAAATGAGAGAATGGTTATTCAAGCTTTGGGTTGGAAAACCAGGAATGAGAGACTTAATCTGGAAGGGAGCATGTCTTGCACTAAATGCGGGCAAATGGTCAAAATCCCTGGCAGAAATTTGTGCCTTCCACAAATTGCCTTCTCCGACAGATGATGAGAGGCTTCCTGTTGGCACGGGTAGCAATCCTGTTTATCTCATGAGCAATTGTGTAATCAAAATATTTGTTGAGGAAGGACTGGAAACGTCACTTTATGGATTAGGTGCTGAGCTTGAGTTCTACAGTCTCCTAGGCAACGTCAACTCCCCTCTGAAAAATCACATACCTGACATTTTGGCAAGTGGAATCATTTATCTTGAAAATGGAACTTATAAAATTATACCTTGGGATGGCAAGAGAGTTCCTGATGTGATTGCTAAGTGCAATTTTATTCCAGAGAAGGTCAAAGAAGATGTTTCTCCTTTTGGTGTATGGAGGAAGAAACAATATGAGTATAGAAAAGCTGGGCTGTCAACAGACAAATCCATCAATTCAGTTGAATATACAAGGATATGGCCATATCTCATAACGAAACGGTGCAAAGGGAAAATATATGCAGAGTTAAGAGATGCTGTATCACGAGAAGATGAACTAAACTTAGCTTCCTTCCTGGGAGAGCAGCTCCGTAACCTCCATCTGTTGCCCCCTCCACCTCTTAATATCTCAACTTCCTCAGATATTGAGCAGGAATCAGATCGACCCTTCACCAACGGTAGTGTGGAAGCTGTTCCCGATCAATCAGACATTCCTGCTGAATGGGATATGTTCATTAGAACACTGTCCAAGAAGAAGAACGATGTCTCAAGTCGCTTGATCAAATGGGGAGATCCAATTCCTAGCACACTCATAGAGATAGTCCACAAATACATCCCAGATGATTTTGCCAAGTTTCTCTACATATTCAAGGATGAAAATGGCAGAAGCAAAGTTAGTAAAAGTTGTTCGTGGATACACTCTGATATCATGGACGACAACATTCACATGGAACCATGTGGTGTTAATTCTTGCTTCATTGGCAACGCCAAAACCACTTGCCTGGTGATCCTATCTATGATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
APH Cupin_8 F-box F-box-like JmjC

Protein Analysis

846

Amino Acids

96.56

Weight (kDa)

5.56

Isoelectric Point (pI)

44.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 23 - 67 2.3e-07 F-box-like
Cupin_8 PF13621 150 - 296 2.6e-08 Cupin-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000630)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78280
fragaria_vesca FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800
malus_domestica MD08G1186800.v1.1 MD15G1372700.v1.1
prunus_persica Prupe.1G521300_v2.0.a1 Prupe.1G521300_v2.0.a1
pyrus_communis pycom08g16060 pycom15g33370
rosa_chinensis RchiOBHm_Chr2g0139391 RchiOBHm_Chr7g0242931 RchiOBHm_Chr7g0242951 RchiOBHm_Chr7g0243001 RchiOBHm_Chr7g0243011 RchiOBHm_Chr7g0243141 RchiOBHm_Chr7g0243151 RchiOBHm_Chr7g0243351
rosa_laevigata RLG00000000853 RLG00000000857 RLG00000000858 RLG00000000863 RLG00000000867
rosa_multiflora Rmu_co8457323.1_g000001 Rmu_sc0000083.1_g000017 Rmu_sc0000679.1_g000021 Rmu_sc0001036.1_g000029 Rmu_sc0001036.1_g000032 Rmu_sc0001176.1_g000015 Rmu_sc0001461.1_g000002 Rmu_sc0001461.1_g000003 Rmu_sc0001461.1_g000056 Rmu_sc0001461.1_g000057 Rmu_sc0001461.1_g000098 Rmu_sc0001461.1_g000105 Rmu_sc0004165.1_g000084 Rmu_sc0006141.1_g000004 Rmu_sc0033806.1_g000001
rosa_roxburghii Rroxscaffold_3G00222160 Rroxscaffold_3G00222220 Rroxscaffold_4G00316290
rosa_rugosa Rorug07G0318400 Rorug07G0318400 Rorug07G0318600
rosa_samantha Rh4CG066500 Rh5DG444300 Rh7AG473700 Rh7AG473900 Rh7AG474000 Rh7AG474600 Rh7AG474800 Rh7BG444500 Rh7BG444700 Rh7CG490700 Rh7CG490800 Rh7CG491000 Rh7DG458900 Rh7DG459000 Rh7DG459300
rosa_wichuraiana Rw7G038970 Rw7G039050 Rw7G039420 Rw7G039480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 1248, 1401, 1812
AasI GACNNNNNNGTC 1 cut(s) 926
AatII GACGTC 1 cut(s) 126
AccB1I GGYRCC 1 cut(s) 1144
AccB7I CCANNNNNTGG 1 cut(s) 828
AccBSI CCGCTC 2 cut(s) 220, 1047
AccII CGCG 2 cut(s) 120, 282
AciI CCGC 5 cut(s) 218, 635, 779, 1047, 1529
AclWI GGATC 5 cut(s) 626, 639, 803, 2300, 2515
AcoI YGGCCR 1 cut(s) 1994
AcsI RAATTY 4 cut(s) 1108, 1124, 1360, 1557
AcyI GRCGYC 1 cut(s) 123
AfaI GTAC 6 cut(s) 227, 338, 502, 699, 885, 903
AfiI CCNNNNNNNGG 2 cut(s) 828, 1829
AflIII ACRYGT 1 cut(s) 904
AgeI ACCGGT 2 cut(s) 351, 457
AhlI ACTAGT 1 cut(s) 1325
Alw21I GWGCWC 5 cut(s) 87, 569, 1013, 1339, 1418
Alw26I GTCTC 4 cut(s) 1022, 1485, 1730, 2284
Alw44I GTGCAC 1 cut(s) 1009
AlwI GGATC 5 cut(s) 626, 639, 803, 2300, 2515
AlwNI CAGNNNCTG 1 cut(s) 828
Ama87I CYCGRG 1 cut(s) 56
AoxI GGCC 5 cut(s) 29, 44, 488, 861, 1994
ApaLI GTGCAC 1 cut(s) 1009
ApeKI GCWGC 3 cut(s) 106, 253, 2098
ApoI RAATTY 4 cut(s) 1108, 1124, 1360, 1557
AsiGI ACCGGT 2 cut(s) 351, 457
Asp700I GAANNNNTTC 1 cut(s) 2205
AspA2I CCTAGG 1 cut(s) 1729
AspLEI GCGC 1 cut(s) 95
AspS9I GGNCC 6 cut(s) 30, 45, 70, 215, 776, 861
AsuHPI GGTGA 3 cut(s) 935, 2176, 2530
AvaI CYCGRG 1 cut(s) 56
AvaII GGWCC 3 cut(s) 70, 215, 776
AvrII CCTAGG 1 cut(s) 1729
BaeGI GKGCMC 1 cut(s) 1013
BalI TGGCCA 1 cut(s) 1996
BamHI GGATCC 1 cut(s) 631
BanI GGYRCC 1 cut(s) 1144
BanII GRGCYC 3 cut(s) 87, 569, 1418
BauI CACGAG 1 cut(s) 2058
BbsI GAAGAC 3 cut(s) 251, 921, 999
Bbv12I GWGCWC 5 cut(s) 87, 569, 1013, 1339, 1418
BbvI GCAGC 3 cut(s) 93, 240, 2110
BceAI ACGGC 3 cut(s) 80, 256, 1158
BciVI GTATCC 2 cut(s) 879, 2421
BclI TGATCA 2 cut(s) 649, 2292
BcoDI GTCTC 4 cut(s) 1022, 1485, 1730, 2284
BcuI ACTAGT 1 cut(s) 1325
BfaI CTAG 5 cut(s) 965, 1266, 1326, 1730, 2316
BfmI CTRYAG 2 cut(s) 888, 1720
BfuI GTATCC 2 cut(s) 879, 2421
BglI GCCNNNNNGGC 2 cut(s) 184, 496
BisI GCNGC 3 cut(s) 107, 254, 2099
BlnI CCTAGG 1 cut(s) 1729
BlpI GCTNAGC 2 cut(s) 618, 1707
BlsI GCNGC 3 cut(s) 108, 255, 2100
Bme18I GGWCC 3 cut(s) 70, 215, 776
BmeT110I CYCGRG 1 cut(s) 56
BmgT120I GGNCC 6 cut(s) 30, 45, 70, 215, 776, 861
BmiI GGNNCC 4 cut(s) 235, 633, 1146, 2466
BmsI GCATC 3 cut(s) 472, 1212, 2038
BpiI GAAGAC 3 cut(s) 251, 921, 999
BplI GAGNNNNNCTC 4 cut(s) 95, 127, 2085, 2117
BpmI CTGGAG 3 cut(s) 206, 858, 1320
Bpu10I CCTNAGC 2 cut(s) 1338, 1417
Bpu1102I GCTNAGC 2 cut(s) 618, 1707
BpuEI CTTGAG 2 cut(s) 1733, 2266
BsaAI YACGTR 1 cut(s) 572
BsaBI GATNNNNATC 2 cut(s) 630, 972
BsaHI GRCGYC 1 cut(s) 123
BsaJI CCNNGG 8 cut(s) 55, 420, 1022, 1409, 1548, 1729, 1823, 2089
BsaWI WCCGGW 2 cut(s) 351, 457
BsaXI ACNNNNNCTCC 6 cut(s) 218, 248, 556, 586, 1727, 1757
Bsc4I CCNNNNNNNGG 2 cut(s) 828, 1829
Bse118I RCCGGY 3 cut(s) 42, 351, 457
Bse1I ACTGG 3 cut(s) 223, 822, 1683
Bse3DI GCAATG 2 cut(s) 175, 950
Bse8I GATNNNNATC 2 cut(s) 630, 972
BseDI CCNNGG 8 cut(s) 55, 420, 1022, 1409, 1548, 1729, 1823, 2089
BseGI GGATG 7 cut(s) 295, 376, 1055, 1387, 1834, 2346, 2392
BseJI GATNNNNATC 2 cut(s) 630, 972
BseLI CCNNNNNNNGG 2 cut(s) 828, 1829
BseMI GCAATG 2 cut(s) 175, 950
BseMII CTCAG 8 cut(s) 179, 296, 632, 1269, 1352, 1431, 1698, 2166
BseNI ACTGG 3 cut(s) 223, 822, 1683
BseRI GAGGAG 1 cut(s) 105
BseSI GKGCMC 1 cut(s) 1013
BseXI GCAGC 3 cut(s) 93, 240, 2110
BseYI CCCAGC 1 cut(s) 1943
Bsh1236I CGCG 2 cut(s) 120, 282
BshFI GGCC 5 cut(s) 31, 46, 490, 863, 1996
BshNI GGYRCC 1 cut(s) 1144
BshTI ACCGGT 2 cut(s) 351, 457
BsiHKAI GWGCWC 5 cut(s) 87, 569, 1013, 1339, 1418
BsiHKCI CYCGRG 1 cut(s) 56
BsiSI CCGG 4 cut(s) 28, 43, 352, 458
BslI CCNNNNNNNGG 2 cut(s) 828, 1829
BsmAI GTCTC 4 cut(s) 1022, 1485, 1730, 2284
BsmBI CGTCTC 1 cut(s) 1022
BsnI GGCC 5 cut(s) 31, 46, 490, 863, 1996
BsoBI CYCGRG 1 cut(s) 56
Bsp1286I GDGCHC 5 cut(s) 87, 569, 1013, 1339, 1418
Bsp1407I TGTACA 1 cut(s) 336
Bsp1720I GCTNAGC 2 cut(s) 618, 1707
Bsp68I TCGCGA 1 cut(s) 120
BspACI CCGC 5 cut(s) 218, 635, 779, 1047, 1529
BspANI GGCC 5 cut(s) 31, 46, 490, 863, 1996
BspCNI CTCAG 8 cut(s) 180, 297, 631, 1268, 1351, 1430, 1699, 2165
BspFNI CGCG 2 cut(s) 120, 282
BspHI TCATGA 1 cut(s) 1638
BspLI GGNNCC 4 cut(s) 235, 633, 1146, 2466
BspPI GGATC 5 cut(s) 626, 639, 803, 2300, 2515
BspQI GCTCTTC 1 cut(s) 168
BspT107I GGYRCC 1 cut(s) 1144
BsrBI CCGCTC 2 cut(s) 220, 1047
BsrDI GCAATG 2 cut(s) 175, 950
BsrFI RCCGGY 3 cut(s) 42, 351, 457
BsrGI TGTACA 1 cut(s) 336
BsrI ACTGG 3 cut(s) 223, 822, 1683
BssAI RCCGGY 3 cut(s) 42, 351, 457
BssECI CCNNGG 8 cut(s) 55, 420, 1022, 1409, 1548, 1729, 1823, 2089
BssNI GRCGYC 1 cut(s) 123
BssSI CACGAG 1 cut(s) 2058
BssT1I CCWWGG 3 cut(s) 1409, 1729, 1823
Bst2BI CACGAG 1 cut(s) 2058
Bst6I CTCTTC 4 cut(s) 168, 420, 874, 1380
BstACI GRCGYC 1 cut(s) 123
BstAPI GCANNNNNTGC 3 cut(s) 491, 1517, 1526
BstAUI TGTACA 1 cut(s) 336
BstBAI YACGTR 1 cut(s) 572
BstC8I GCNNGC 5 cut(s) 44, 130, 468, 492, 1531
BstDSI CCRYGG 1 cut(s) 420
BstF5I GGATG 7 cut(s) 295, 376, 1055, 1387, 1834, 2346, 2392
BstFNI CGCG 2 cut(s) 120, 282
BstHHI GCGC 1 cut(s) 95
BstMAI GTCTC 4 cut(s) 1022, 1485, 1730, 2284
BstNSI RCATGY 3 cut(s) 806, 908, 1515
BstSFI CTRYAG 2 cut(s) 888, 1720
BstSLI GKGCMC 1 cut(s) 1013
BstUI CGCG 2 cut(s) 120, 282
BstV1I GCAGC 3 cut(s) 93, 240, 2110
BstV2I GAAGAC 3 cut(s) 251, 921, 999
BstX2I RGATCY 2 cut(s) 631, 2305
BstXI CCANNNNNNTGG 4 cut(s) 762, 1022, 1378, 2515
BstYI RGATCY 2 cut(s) 631, 2305
BsuI GTATCC 2 cut(s) 879, 2421
BsuRI GGCC 5 cut(s) 31, 46, 490, 863, 1996
BtgI CCRYGG 1 cut(s) 420
BtsCI GGATG 7 cut(s) 295, 376, 1055, 1387, 1834, 2346, 2392
BtsI GCAGTG 2 cut(s) 154, 962
BtsIMutI CAGTG 7 cut(s) 154, 302, 700, 829, 962, 1057, 2255
BtuMI TCGCGA 1 cut(s) 120
Cac8I GCNNGC 5 cut(s) 44, 130, 468, 492, 1531
CaiI CAGNNNCTG 1 cut(s) 828
CciI TCATGA 1 cut(s) 1638
CfoI GCGC 1 cut(s) 95
Cfr10I RCCGGY 3 cut(s) 42, 351, 457
Cfr13I GGNCC 6 cut(s) 30, 45, 70, 215, 776, 861
CsiI ACCWGGT 1 cut(s) 1147
Csp6I GTAC 6 cut(s) 226, 337, 501, 698, 884, 902
CspAI ACCGGT 2 cut(s) 351, 457
CviQI GTAC 6 cut(s) 226, 337, 501, 698, 884, 902
DrdI GACNNNNNNGTC 1 cut(s) 926
DseDI GACNNNNNNGTC 1 cut(s) 926
EaeI YGGCCR 1 cut(s) 1994
Eam1104I CTCTTC 4 cut(s) 168, 420, 874, 1380
EarI CTCTTC 4 cut(s) 168, 420, 874, 1380
Ecl136II GAGCTC 3 cut(s) 85, 567, 1416
Eco130I CCWWGG 3 cut(s) 1409, 1729, 1823
Eco24I GRGCYC 3 cut(s) 87, 569, 1418
Eco32I GATATC 1 cut(s) 2440
Eco47I GGWCC 3 cut(s) 70, 215, 776
Eco53kI GAGCTC 3 cut(s) 85, 567, 1416
Eco88I CYCGRG 1 cut(s) 56
EcoICRI GAGCTC 3 cut(s) 85, 567, 1416
EcoRV GATATC 1 cut(s) 2440
EcoT14I CCWWGG 3 cut(s) 1409, 1729, 1823
EcoT22I ATGCAT 1 cut(s) 487
EcoT38I GRGCYC 3 cut(s) 87, 569, 1418
ErhI CCWWGG 3 cut(s) 1409, 1729, 1823
Esp3I CGTCTC 1 cut(s) 1022
FauI CCCGC 1 cut(s) 1522
FbaI TGATCA 2 cut(s) 649, 2292
Fnu4HI GCNGC 3 cut(s) 107, 254, 2099
FokI GGATG 7 cut(s) 302, 383, 1062, 1394, 1841, 2333, 2399
FriOI GRGCYC 3 cut(s) 87, 569, 1418
Fsp4HI GCNGC 3 cut(s) 107, 254, 2099
FspBI CTAG 5 cut(s) 965, 1266, 1326, 1730, 2316
GlaI GCGC 1 cut(s) 94
GluI GCNGC 3 cut(s) 107, 254, 2099
GsaI CCCAGC 1 cut(s) 1947
GsuI CTGGAG 3 cut(s) 206, 858, 1320
HaeIII GGCC 5 cut(s) 31, 46, 490, 863, 1996
HapII CCGG 4 cut(s) 28, 43, 352, 458
HhaI GCGC 1 cut(s) 95
Hin1I GRCGYC 1 cut(s) 123
Hin6I GCGC 1 cut(s) 93
HinP1I GCGC 1 cut(s) 93
HincII GTYRAC 2 cut(s) 1741, 1953
HindII GTYRAC 2 cut(s) 1741, 1953
HindIII AAGCTT 1 cut(s) 1463
HinfI GANTC 6 cut(s) 318, 323, 1214, 1281, 1785, 2168
HpaII CCGG 4 cut(s) 28, 43, 352, 458
HphI GGTGA 3 cut(s) 935, 2176, 2530
Hpy166II GTNNAC 5 cut(s) 698, 1011, 1741, 1953, 2338
Hpy8I GTNNAC 5 cut(s) 698, 1011, 1741, 1953, 2338
Hpy99I CGWCG 4 cut(s) 83, 125, 128, 923
HpyAV CCTTC 9 cut(s) 989, 1193, 1498, 1576, 1590, 1667, 1873, 2095, 2191
HpyCH4IV ACGT 4 cut(s) 123, 571, 1685, 1737
HpySE526I ACGT 4 cut(s) 123, 571, 1685, 1737
Hsp92I GRCGYC 1 cut(s) 123
HspAI GCGC 1 cut(s) 93
KroI GCCGGC 1 cut(s) 42
KroNI GCCGGC 1 cut(s) 44
Ksp22I TGATCA 2 cut(s) 649, 2292
LguI GCTCTTC 1 cut(s) 168
LmnI GCTCC 8 cut(s) 103, 225, 239, 564, 1411, 1413, 1508, 2106
Lsp1109I GCAGC 3 cut(s) 93, 240, 2110
LweI GCATC 3 cut(s) 472, 1212, 2038
MabI ACCWGGT 1 cut(s) 1147
MaeI CTAG 5 cut(s) 965, 1266, 1326, 1730, 2316
MaeII ACGT 4 cut(s) 123, 571, 1685, 1737
MaeIII GTNAC 5 cut(s) 437, 895, 1090, 1686, 2105
MbiI CCGCTC 2 cut(s) 220, 1047
MfeI CAATTG 2 cut(s) 1423, 1645
MflI RGATCY 2 cut(s) 631, 2305
MhlI GDGCHC 5 cut(s) 87, 569, 1013, 1339, 1418
MlsI TGGCCA 1 cut(s) 1996
MluNI TGGCCA 1 cut(s) 1996
MlyI GAGTC 2 cut(s) 317, 1290
MmeI TCCRAC 3 cut(s) 968, 1453, 1610
Mox20I TGGCCA 1 cut(s) 1996
Mph1103I ATGCAT 1 cut(s) 487
MroNI GCCGGC 1 cut(s) 42
MroXI GAANNNNTTC 1 cut(s) 2205
MscI TGGCCA 1 cut(s) 1996
MseI TTAA 5 cut(s) 210, 1496, 2042, 2136, 2478
MslI CAYNNNNRTG 5 cut(s) 760, 841, 909, 955, 2459
Msp20I TGGCCA 1 cut(s) 1996
MspI CCGG 4 cut(s) 28, 43, 352, 458
MunI CAATTG 2 cut(s) 1423, 1645
MvnI CGCG 2 cut(s) 120, 282
NaeI GCCGGC 1 cut(s) 44
NgoMIV GCCGGC 1 cut(s) 42
NlaIV GGNNCC 4 cut(s) 235, 633, 1146, 2466
NmuCI GTSAC 3 cut(s) 437, 895, 1686
NruI TCGCGA 1 cut(s) 120
NsiI ATGCAT 1 cut(s) 487
NspI RCATGY 3 cut(s) 806, 908, 1515
PagI TCATGA 1 cut(s) 1638
PciI ACATGT 1 cut(s) 904
PciSI GCTCTTC 1 cut(s) 168
PdiI GCCGGC 1 cut(s) 44
PdmI GAANNNNTTC 1 cut(s) 2205
PfeI GAWTC 4 cut(s) 318, 1214, 1785, 2168
PflMI CCANNNNNTGG 1 cut(s) 828
PfoI TCCNGGA 2 cut(s) 236, 874
PinAI ACCGGT 2 cut(s) 351, 457
PkrI GCNGC 3 cut(s) 108, 255, 2100
PleI GAGTC 2 cut(s) 317, 1289
PpsI GAGTC 2 cut(s) 317, 1289
Ppu21I YACGTR 1 cut(s) 572
PscI ACATGT 1 cut(s) 904
PsiI TTATAA 3 cut(s) 1248, 1401, 1812
Psp124BI GAGCTC 3 cut(s) 87, 569, 1418
PspFI CCCAGC 1 cut(s) 1943
PspN4I GGNNCC 4 cut(s) 235, 633, 1146, 2466
PspPI GGNCC 6 cut(s) 30, 45, 70, 215, 776, 861
PsrI GAACNNNNNNTAC 2 cut(s) 2404, 2436
PstNI CAGNNNCTG 1 cut(s) 828
PsuI RGATCY 2 cut(s) 631, 2305
RruI TCGCGA 1 cut(s) 120
RsaI GTAC 6 cut(s) 227, 338, 502, 699, 885, 903
RsaNI GTAC 6 cut(s) 226, 337, 501, 698, 884, 902
RseI CAYNNNNRTG 5 cut(s) 760, 841, 909, 955, 2459
SacI GAGCTC 3 cut(s) 87, 569, 1418
SapI GCTCTTC 1 cut(s) 168
SaqAI TTAA 5 cut(s) 210, 1496, 2042, 2136, 2478
SatI GCNGC 3 cut(s) 107, 254, 2099
Sau96I GGNCC 6 cut(s) 30, 45, 70, 215, 776, 861
SchI GAGTC 2 cut(s) 317, 1290
SduI GDGCHC 5 cut(s) 87, 569, 1013, 1339, 1418
SexAI ACCWGGT 1 cut(s) 1147
SfaNI GCATC 3 cut(s) 472, 1212, 2038
SfcI CTRYAG 2 cut(s) 888, 1720
SinI GGWCC 3 cut(s) 70, 215, 776
SmiMI CAYNNNNRTG 5 cut(s) 760, 841, 909, 955, 2459
SmlI CTYRAG 2 cut(s) 1712, 2281
SmoI CTYRAG 2 cut(s) 1712, 2281
SpeI ACTAGT 1 cut(s) 1325
SsiI CCGC 5 cut(s) 218, 635, 779, 1047, 1529
SspI AATATT 1 cut(s) 1662
SspMI CTAG 5 cut(s) 965, 1266, 1326, 1730, 2316
SstI GAGCTC 3 cut(s) 87, 569, 1418
StyI CCWWGG 3 cut(s) 1409, 1729, 1823
TaiI ACGT 4 cut(s) 126, 574, 1688, 1740
TaqI TCGA 3 cut(s) 321, 936, 2176
TatI WGTACW 3 cut(s) 225, 336, 901
TfiI GAWTC 4 cut(s) 318, 1214, 1785, 2168
Tru1I TTAA 5 cut(s) 210, 1496, 2042, 2136, 2478
Tru9I TTAA 5 cut(s) 210, 1496, 2042, 2136, 2478
TscAI CASTG 7 cut(s) 154, 309, 700, 829, 962, 1064, 2262
TseFI GTSAC 3 cut(s) 437, 895, 1686
TseI GCWGC 3 cut(s) 106, 253, 2098
Tsp45I GTSAC 3 cut(s) 437, 895, 1686
TspGWI ACGGA 2 cut(s) 12, 2093
TspRI CASTG 7 cut(s) 154, 309, 700, 829, 962, 1064, 2262
Van91I CCANNNNNTGG 1 cut(s) 828
VneI GTGCAC 1 cut(s) 1009
VpaK11BI GGWCC 3 cut(s) 70, 215, 776
XapI RAATTY 4 cut(s) 1108, 1124, 1360, 1557
XceI RCATGY 3 cut(s) 806, 908, 1515
XcmI CCANNNNNNNNNTGG 1 cut(s) 2194
XmaJI CCTAGG 1 cut(s) 1729
XmnI GAANNNNTTC 1 cut(s) 2205
XspI CTAG 5 cut(s) 965, 1266, 1326, 1730, 2316
ZraI GACGTC 1 cut(s) 124
Zsp2I ATGCAT 1 cut(s) 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.