Rw7G038970

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000630
Physical Location & Seq
Forward (+)
59752698 .. 59759230
6533 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G038970.1

Sequence Viewer

Length: 2772 bp
ATGGAGGTTTCCGAAGCCCCTCTCTTCCTGCCAAGAGACCGCCGCCCGGACGCCCTCGGAAGCTTCCTAGTCCTCCCCGACGAGCTCATCTGTGCCGTCTTGGAATTGCTCTCTCCTCGCGACGTTGCTCGCCTCTCCTGCGTTAGCAGTTTATGCCTCAACGCACTGAATGGTCCGCTCCAATACAAAGAATCCGAGAATGTGTCGTATGAGCGCGATGAGGCTTGCAGAAAACCATTGAGTTTTGATGGATTCGACTCTTTGTTCTTGTACAGAAGATTATACAGGTGTCATACCACATTGGATGGTTTTTCTTTTGACAATGGGAATGTGAAAAGAAAGGACAAGATCACATTGGAAGAGTTTTCTTGTGATTATGATGGGAAGAAACCGGTTTTGCTCTCTGGATTAGCTGATGCATGGCCTGCAAGGCGTACATGGACACTTGACCACTTATTGCAGAATTATGGAGATACAGCTTTCAAGATTTCTCAAAGGAGCTCACGTAAAATCTCAATGACATTCAAAGATTATGTTTCATATATGAAGGTTCAGCATAATGAGGATCCGCTTTATATCTTTGATCACAAGTTTGGAGAGGTTGAACCTGGCTTGTTGAAAGATTACAGTGTGCCTTATCTATTTCAAGAGGACTTTTTTGATGTTTTGGACAAAGATAAGCGACCTCCATTTAGATGCCTCATTATTGGTCCCCAGAGGTCTGGTGCTTCTTGGCATGTTGATCCAGCTCTGACCAGTGCCTGGAATACACTTCTATGTGGTCGTAAAAGAATAGATTTTTATCCACTTCTTGCTGATGAAGACAAGCCCATAGAGTGCACCCAAATGCCGGGGGAGACGATTTTCGTTCCTAGTGGATGGTGGCACTGTGTCCTAAATCTTGAACCATCTATTGCTGTTACCCAGAACTTTGTAAATTCTAAGAACTTTGAATTTGTGTGCTTGGATATGGCACCTGGTTATCGTCATAAGGGAGTTTGCCGTGCTGGATTACTTGCAGATGATGAAGGCGGTATTGAGGATTCCACAAATCATATTGTCTATGATAAAGATGATTATAATTCCTCAGATATGACTAGGAAAGTAAAAAGAGTCACAACTCTCAAACCTGGAGAATATCCTAGTAGTGAAAGAACTAGTAATGGTGCTCAGGGTTTTTCTTATGATGTAAATTTCTTAGCCATGTATCTGGATGAAGAGAGAGATCATTACAACTCTCCTTGGAGCTCAGGCAATTGCATAGGACAACGAGAAATGAGAGACTGGTTATTCAAGCTTTGGGTTGGAAAACCAGGAATGAGAGACTTGATCTGGAAGGGAGCATGTCTTGCACTAAATGCTAGCAAATGGTCAGAATCCCTGGCAGAAATTTGTGCCTTCCACAAATTGCCTTCTCCAACAGATGATGAGAGGCTTCCAGTTGGCATGGGTAGCAATCCTGTTTATCTCATGAGCAACTGCGTAATCAAAATTTTTGTTGAGGAAGGACTGGAAACGTCACTTTATGGATTAGGTGCTGAGCTTGAGTTCTACAGTCTCCTAGGCAAAGTCACCTCCCCTCTGAAAAATCACGTACCTGACGTTTTGGCAAGTGGGATAATTTATCTTGAAAATGGAACAGTTCCTGATGTGATTGCTAACTGCAATTTTATTCCGGAGAAGGTCAAAGGAGATGTTTCTCCTTTTGGTGTATGGAGGAAGAAACAATTTGAATACAGAAAAGCTGGGGTCTCAACAAACGAATTCATCAGTTCAGCTGAATATACAAGGATATGGCCATATCTCATAGCAAAACGATGCAAAGGAAAAATATATGCAGAGTTAAGAGATACCGTGTCACGGGAAGATGAACTGAACTTAGCTTCCTTCCTGGGAGAGCAGCTCCGTAACCTCCATCTCTTGCCCCATCCACCTCTTAATATCTCAACTTTCTCAGATATTGAACAGGGATCAGATTTTCCTTTCACCAACGGTAGTATGGAAGCTGTTCCCCATAAATCAAACATTCCTGCTGAATGGGATATATTCATTAGAACTCTATTCAAGAAGAAGAAGGATGTCTCAAGTCACTTGATTAAATGGGGAGATCCAATTCCTAGCACACTCATAGAGAAAGTTGACAAGTACATCCCAGATGATTTTGCCAAGTTTCTGTACATGTTCAAGGATGAAAATGGTGTGAGCAAACTTGGTAAAAGTTGTTCGTGGATACACTCTGATATCATGGATGACAACATTCACATGGAACTATGTGGTTTTAATTCTTGCTTCATTGGCAACGCCAAAGACACTTGCCTGGTAAATAATGGTTCCTTGAATGTTGATGGTGACCGTGCAGAGAGGAAAACATGGTGCCCTAGCCACATTCTTGATTTCAGTAATCTTTCTATAGGTGATCCCATCTATGATTTGATACCCCTATACTTGGATATATTCAGAGGTGATTGCTACCTCGTTAAGCAATTTCTAGATAGTTATAAACTTCCTTTAGTAAGACAAGCATCACCTCATGAGTATATGGAGGGTGGCGACAAGTTTGGACGACTTTCCTACCATGCCATGTGTTACTGTATTCTACATGAAGAGAATGTCCTGGGAGCAATTTTTAGTCTCTGGGACGAACTCAAGATGGCAAAATCATGGGAAGAAGTTGAACAAGTCGTATGGGGCGAGCTAAATAACTACAAAGGTTTTCCTGGATCATCCACACATCTCTCTTTGTTGGGGCCGAGAACTCCCTCAACATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
APH Cupin_8 F-box F-box-like JmjC

Protein Analysis

923

Amino Acids

105.03

Weight (kDa)

5.41

Isoelectric Point (pI)

40.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cupin_8 PF13621 268 - 314 1.3e-06 Cupin-like domain
JmjC PF02373 276 - 311 8.5e-08 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000630)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78280
fragaria_vesca FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800
malus_domestica MD08G1186800.v1.1 MD15G1372700.v1.1
prunus_persica Prupe.1G521300_v2.0.a1 Prupe.1G521300_v2.0.a1
pyrus_communis pycom08g16060 pycom15g33370
rosa_chinensis RchiOBHm_Chr2g0139391 RchiOBHm_Chr7g0242931 RchiOBHm_Chr7g0242951 RchiOBHm_Chr7g0243001 RchiOBHm_Chr7g0243011 RchiOBHm_Chr7g0243141 RchiOBHm_Chr7g0243151 RchiOBHm_Chr7g0243351
rosa_laevigata RLG00000000853 RLG00000000857 RLG00000000858 RLG00000000863 RLG00000000867
rosa_multiflora Rmu_co8457323.1_g000001 Rmu_sc0000083.1_g000017 Rmu_sc0000679.1_g000021 Rmu_sc0001036.1_g000029 Rmu_sc0001036.1_g000032 Rmu_sc0001176.1_g000015 Rmu_sc0001461.1_g000002 Rmu_sc0001461.1_g000003 Rmu_sc0001461.1_g000056 Rmu_sc0001461.1_g000057 Rmu_sc0001461.1_g000098 Rmu_sc0001461.1_g000105 Rmu_sc0004165.1_g000084 Rmu_sc0006141.1_g000004 Rmu_sc0033806.1_g000001
rosa_roxburghii Rroxscaffold_3G00222160 Rroxscaffold_3G00222220 Rroxscaffold_4G00316290
rosa_rugosa Rorug07G0318400 Rorug07G0318400 Rorug07G0318600
rosa_samantha Rh4CG066500 Rh5DG444300 Rh7AG473700 Rh7AG473900 Rh7AG474000 Rh7AG474600 Rh7AG474800 Rh7BG444500 Rh7BG444700 Rh7CG490700 Rh7CG490800 Rh7CG491000 Rh7DG458900 Rh7DG459000 Rh7DG459300
rosa_wichuraiana Rw7G038970 Rw7G039050 Rw7G039420 Rw7G039480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1080, 2499
AccB1I GGYRCC 2 cut(s) 973, 2373
AccB7I CCANNNNNTGG 1 cut(s) 762
AccBSI CCGCTC 1 cut(s) 178
AccII CGCG 2 cut(s) 120, 216
AccIII TCCGGA 1 cut(s) 1675
AciI CCGC 5 cut(s) 40, 43, 176, 569, 1032
AclWI GGATC 7 cut(s) 560, 573, 737, 1978, 2102, 2411, 2728
AcoI YGGCCR 1 cut(s) 1796
AcsI RAATTY 6 cut(s) 937, 953, 1192, 1389, 1491, 1763
AcyI GRCGYC 1 cut(s) 51
AfaI GTAC 5 cut(s) 272, 436, 1596, 2147, 2177
AfiI CCNNNNNNNGG 5 cut(s) 46, 762, 850, 1860, 2446
AflIII ACRYGT 1 cut(s) 2178
AgeI ACCGGT 1 cut(s) 391
AhlI ACTAGT 1 cut(s) 1157
AloI GAACNNNNNNTCC 2 cut(s) 1868, 1900
Alw21I GWGCWC 5 cut(s) 87, 503, 842, 1171, 1250
Alw26I GTCTC 8 cut(s) 30, 851, 1275, 1317, 1562, 1756, 2086, 2636
Alw44I GTGCAC 1 cut(s) 838
AlwI GGATC 7 cut(s) 560, 573, 737, 1978, 2102, 2411, 2728
AlwNI CAGNNNCTG 2 cut(s) 762, 1646
Aor13HI TCCGGA 1 cut(s) 1675
AoxI GGCC 3 cut(s) 422, 1796, 2747
ApaLI GTGCAC 1 cut(s) 838
ApeKI GCWGC 1 cut(s) 1900
ApoI RAATTY 6 cut(s) 937, 953, 1192, 1389, 1491, 1763
AsiGI ACCGGT 1 cut(s) 391
Asp700I GAANNNNTTC 1 cut(s) 2007
AspA2I CCTAGG 1 cut(s) 1561
AspLEI GCGC 1 cut(s) 216
AspS9I GGNCC 3 cut(s) 173, 710, 2747
AsuC2I CCSGG 2 cut(s) 47, 852
AsuHPI GGTGA 6 cut(s) 1564, 1978, 2360, 2426, 2474, 2517
AsuNHI GCTAGC 1 cut(s) 1361
AvaII GGWCC 2 cut(s) 173, 710
AvrII CCTAGG 1 cut(s) 1561
BaeGI GKGCMC 2 cut(s) 842, 2378
BalI TGGCCA 1 cut(s) 1798
BamHI GGATCC 1 cut(s) 565
BanI GGYRCC 2 cut(s) 973, 2373
BanII GRGCYC 3 cut(s) 87, 503, 1250
BbsI GAAGAC 1 cut(s) 828
Bbv12I GWGCWC 5 cut(s) 87, 503, 842, 1171, 1250
BbvI GCAGC 1 cut(s) 1912
BceAI ACGGC 2 cut(s) 80, 987
BciVI GTATCC 1 cut(s) 2223
BclI TGATCA 1 cut(s) 583
BcnI CCSGG 2 cut(s) 47, 852
BcoDI GTCTC 8 cut(s) 30, 851, 1275, 1317, 1562, 1756, 2086, 2636
BcuI ACTAGT 1 cut(s) 1157
BfmI CTRYAG 2 cut(s) 1552, 2409
BfuI GTATCC 1 cut(s) 2223
BglI GCCNNNNNGGC 1 cut(s) 430
BisI GCNGC 2 cut(s) 43, 1901
BlnI CCTAGG 1 cut(s) 1561
BlpI GCTNAGC 1 cut(s) 1539
BlsI GCNGC 2 cut(s) 44, 1902
Bme18I GGWCC 2 cut(s) 173, 710
BmgT120I GGNCC 3 cut(s) 173, 710, 2747
BmiI GGNNCC 6 cut(s) 567, 712, 975, 2332, 2375, 2748
BmsI GCATC 4 cut(s) 406, 686, 1808, 2531
BmtI GCTAGC 1 cut(s) 1365
BpiI GAAGAC 1 cut(s) 828
BplI GAGNNNNNCTC 2 cut(s) 1887, 1919
BpmI CTGGAG 1 cut(s) 1152
Bpu10I CCTNAGC 2 cut(s) 1170, 1249
Bpu1102I GCTNAGC 1 cut(s) 1539
BpuEI CTTGAG 3 cut(s) 1565, 2068, 2630
BpuMI CCSGG 2 cut(s) 47, 852
BsaAI YACGTR 2 cut(s) 506, 1594
BsaBI GATNNNNATC 1 cut(s) 801
BsaHI GRCGYC 1 cut(s) 51
BsaI GGTCTC 2 cut(s) 30, 1756
BsaJI CCNNGG 7 cut(s) 55, 851, 1241, 1380, 1561, 1891, 2614
BsaWI WCCGGW 2 cut(s) 391, 1675
BsaXI ACNNNNNCTCC 2 cut(s) 490, 520
Bsc4I CCNNNNNNNGG 5 cut(s) 46, 762, 850, 1860, 2446
Bse118I RCCGGY 1 cut(s) 391
Bse1I ACTGG 4 cut(s) 756, 1289, 1439, 1515
Bse8I GATNNNNATC 1 cut(s) 801
BseAI TCCGGA 1 cut(s) 1675
BseDI CCNNGG 7 cut(s) 55, 851, 1241, 1380, 1561, 1891, 2614
BseGI GGATG 9 cut(s) 310, 884, 1219, 1927, 2083, 2148, 2194, 2254, 2723
BseJI GATNNNNATC 1 cut(s) 801
BseLI CCNNNNNNNGG 5 cut(s) 46, 762, 850, 1860, 2446
BseMII CTCAG 5 cut(s) 1101, 1184, 1263, 1530, 1968
BseNI ACTGG 4 cut(s) 756, 1289, 1439, 1515
BseRI GAGGAG 1 cut(s) 105
BseSI GKGCMC 2 cut(s) 842, 2378
BseXI GCAGC 1 cut(s) 1912
BseYI CCCAGC 1 cut(s) 1745
BsgI GTGCAG 1 cut(s) 2376
Bsh1236I CGCG 2 cut(s) 120, 216
BshFI GGCC 3 cut(s) 424, 1798, 2749
BshNI GGYRCC 2 cut(s) 973, 2373
BshTI ACCGGT 1 cut(s) 391
BsiHKAI GWGCWC 5 cut(s) 87, 503, 842, 1171, 1250
BsiSI CCGG 4 cut(s) 47, 392, 851, 1676
BslFI GGGAC 2 cut(s) 696, 2651
BslI CCNNNNNNNGG 5 cut(s) 46, 762, 850, 1860, 2446
BsmAI GTCTC 8 cut(s) 30, 851, 1275, 1317, 1562, 1756, 2086, 2636
BsmBI CGTCTC 1 cut(s) 851
BsmFI GGGAC 2 cut(s) 696, 2651
BsnI GGCC 3 cut(s) 424, 1798, 2749
Bso31I GGTCTC 2 cut(s) 30, 1756
Bsp1286I GDGCHC 6 cut(s) 87, 503, 842, 1171, 1250, 2378
Bsp13I TCCGGA 1 cut(s) 1675
Bsp1407I TGTACA 2 cut(s) 270, 2175
Bsp1720I GCTNAGC 1 cut(s) 1539
Bsp68I TCGCGA 1 cut(s) 120
BspACI CCGC 5 cut(s) 40, 43, 176, 569, 1032
BspANI GGCC 3 cut(s) 424, 1798, 2749
BspCNI CTCAG 5 cut(s) 1100, 1183, 1262, 1531, 1967
BspEI TCCGGA 1 cut(s) 1675
BspFNI CGCG 2 cut(s) 120, 216
BspHI TCATGA 2 cut(s) 1470, 2530
BspLI GGNNCC 6 cut(s) 567, 712, 975, 2332, 2375, 2748
BspOI GCTAGC 1 cut(s) 1365
BspPI GGATC 7 cut(s) 560, 573, 737, 1978, 2102, 2411, 2728
BspT107I GGYRCC 2 cut(s) 973, 2373
BspTNI GGTCTC 2 cut(s) 30, 1756
BsrBI CCGCTC 1 cut(s) 178
BsrFI RCCGGY 1 cut(s) 391
BsrGI TGTACA 2 cut(s) 270, 2175
BsrI ACTGG 4 cut(s) 756, 1289, 1439, 1515
BssAI RCCGGY 1 cut(s) 391
BssECI CCNNGG 7 cut(s) 55, 851, 1241, 1380, 1561, 1891, 2614
BssNI GRCGYC 1 cut(s) 51
BssT1I CCWWGG 2 cut(s) 1241, 1561
Bst4CI ACNGT 8 cut(s) 629, 890, 1556, 1642, 1855, 1994, 2354, 2591
Bst6I CTCTTC 4 cut(s) 29, 354, 1212, 2598
BstACI GRCGYC 1 cut(s) 51
BstAPI GCANNNNNTGC 4 cut(s) 153, 425, 1349, 1358
BstAUI TGTACA 2 cut(s) 270, 2175
BstBAI YACGTR 2 cut(s) 506, 1594
BstC8I GCNNGC 5 cut(s) 130, 226, 426, 1363, 2693
BstDEI CTNAG 8 cut(s) 942, 1087, 1170, 1198, 1249, 1539, 1879, 1954
BstEII GGTNACC 1 cut(s) 2348
BstF5I GGATG 9 cut(s) 310, 884, 1219, 1927, 2083, 2148, 2194, 2254, 2723
BstFNI CGCG 2 cut(s) 120, 216
BstHHI GCGC 1 cut(s) 216
BstMAI GTCTC 8 cut(s) 30, 851, 1275, 1317, 1562, 1756, 2086, 2636
BstMWI GCNNNNNNNGC 8 cut(s) 138, 153, 425, 430, 1349, 1358, 1452, 2295
BstNSI RCATGY 3 cut(s) 740, 1347, 2182
BstPI GGTNACC 1 cut(s) 2348
BstSFI CTRYAG 2 cut(s) 1552, 2409
BstSLI GKGCMC 2 cut(s) 842, 2378
BstUI CGCG 2 cut(s) 120, 216
BstV1I GCAGC 1 cut(s) 1912
BstV2I GAAGAC 1 cut(s) 828
BstX2I RGATCY 2 cut(s) 565, 2107
BstXI CCANNNNNNTGG 2 cut(s) 722, 1210
BstYI RGATCY 2 cut(s) 565, 2107
BsuI GTATCC 1 cut(s) 2223
BsuRI GGCC 3 cut(s) 424, 1798, 2749
BtgZI GCGATG 1 cut(s) 231
BtsCI GGATG 9 cut(s) 310, 884, 1219, 1927, 2083, 2148, 2194, 2254, 2723
BtsIMutI CAGTG 4 cut(s) 164, 634, 763, 886
BtuMI TCGCGA 1 cut(s) 120
Cac8I GCNNGC 5 cut(s) 130, 226, 426, 1363, 2693
CaiI CAGNNNCTG 2 cut(s) 762, 1646
CciI TCATGA 2 cut(s) 1470, 2530
CfoI GCGC 1 cut(s) 216
Cfr10I RCCGGY 1 cut(s) 391
Cfr13I GGNCC 3 cut(s) 173, 710, 2747
CseI GACGC 1 cut(s) 59
CsiI ACCWGGT 1 cut(s) 976
Csp6I GTAC 5 cut(s) 271, 435, 1595, 2146, 2176
CspAI ACCGGT 1 cut(s) 391
CviQI GTAC 5 cut(s) 271, 435, 1595, 2146, 2176
DdeI CTNAG 8 cut(s) 942, 1087, 1170, 1198, 1249, 1539, 1879, 1954
EaeI YGGCCR 1 cut(s) 1796
Eam1104I CTCTTC 4 cut(s) 29, 354, 1212, 2598
EarI CTCTTC 4 cut(s) 29, 354, 1212, 2598
Ecl136II GAGCTC 3 cut(s) 85, 501, 1248
Eco130I CCWWGG 2 cut(s) 1241, 1561
Eco24I GRGCYC 3 cut(s) 87, 503, 1250
Eco31I GGTCTC 2 cut(s) 30, 1756
Eco32I GATATC 1 cut(s) 2242
Eco47I GGWCC 2 cut(s) 173, 710
Eco53kI GAGCTC 3 cut(s) 85, 501, 1248
Eco91I GGTNACC 1 cut(s) 2348
EcoICRI GAGCTC 3 cut(s) 85, 501, 1248
EcoO65I GGTNACC 1 cut(s) 2348
EcoRI GAATTC 1 cut(s) 1763
EcoRV GATATC 1 cut(s) 2242
EcoT14I CCWWGG 2 cut(s) 1241, 1561
EcoT22I ATGCAT 1 cut(s) 421
EcoT38I GRGCYC 3 cut(s) 87, 503, 1250
ErhI CCWWGG 2 cut(s) 1241, 1561
Esp3I CGTCTC 1 cut(s) 851
FaqI GGGAC 2 cut(s) 696, 2651
FbaI TGATCA 1 cut(s) 583
Fnu4HI GCNGC 2 cut(s) 43, 1901
FokI GGATG 9 cut(s) 317, 891, 1226, 1914, 2090, 2135, 2201, 2261, 2710
FriOI GRGCYC 3 cut(s) 87, 503, 1250
Fsp4HI GCNGC 2 cut(s) 43, 1901
GlaI GCGC 1 cut(s) 215
GluI GCNGC 2 cut(s) 43, 1901
GsaI CCCAGC 1 cut(s) 1749
GsuI CTGGAG 1 cut(s) 1152
HaeIII GGCC 3 cut(s) 424, 1798, 2749
HapII CCGG 4 cut(s) 47, 392, 851, 1676
HgaI GACGC 1 cut(s) 59
HhaI GCGC 1 cut(s) 216
Hin1I GRCGYC 1 cut(s) 51
Hin6I GCGC 1 cut(s) 214
HinP1I GCGC 1 cut(s) 214
HincII GTYRAC 1 cut(s) 2140
HindII GTYRAC 1 cut(s) 2140
HindIII AAGCTT 2 cut(s) 61, 1295
HinfI GANTC 6 cut(s) 191, 252, 257, 1043, 1113, 1376
HpaII CCGG 4 cut(s) 47, 392, 851, 1676
HphI GGTGA 6 cut(s) 1564, 1978, 2360, 2426, 2474, 2517
Hpy166II GTNNAC 2 cut(s) 840, 2140
Hpy8I GTNNAC 2 cut(s) 840, 2140
Hpy99I CGWCG 2 cut(s) 83, 125
HpyAV CCTTC 9 cut(s) 541, 1022, 1330, 1408, 1422, 1499, 1675, 1897, 2068
HpyCH4III ACNGT 8 cut(s) 629, 890, 1556, 1642, 1855, 1994, 2354, 2591
HpyCH4IV ACGT 5 cut(s) 123, 505, 1517, 1593, 1602
HpyF10VI GCNNNNNNNGC 8 cut(s) 138, 153, 425, 430, 1349, 1358, 1452, 2295
HpyF3I CTNAG 8 cut(s) 942, 1087, 1170, 1198, 1249, 1539, 1879, 1954
HpySE526I ACGT 5 cut(s) 123, 505, 1517, 1593, 1602
Hsp92I GRCGYC 1 cut(s) 51
HspAI GCGC 1 cut(s) 214
Kpn2I TCCGGA 1 cut(s) 1675
Ksp22I TGATCA 1 cut(s) 583
LmnI GCTCC 6 cut(s) 183, 498, 1245, 1340, 1908, 2618
Lsp1109I GCAGC 1 cut(s) 1912
LweI GCATC 4 cut(s) 406, 686, 1808, 2531
MabI ACCWGGT 1 cut(s) 976
MaeII ACGT 5 cut(s) 123, 505, 1517, 1593, 1602
MaeIII GTNAC 9 cut(s) 919, 1114, 1518, 1570, 1857, 1907, 2087, 2348, 2585
MbiI CCGCTC 1 cut(s) 178
MfeI CAATTG 1 cut(s) 1255
MflI RGATCY 2 cut(s) 565, 2107
MhlI GDGCHC 6 cut(s) 87, 503, 842, 1171, 1250, 2378
MlsI TGGCCA 1 cut(s) 1798
MluNI TGGCCA 1 cut(s) 1798
MlyI GAGTC 2 cut(s) 251, 1122
MmeI TCCRAC 2 cut(s) 1285, 1442
Mox20I TGGCCA 1 cut(s) 1798
Mph1103I ATGCAT 1 cut(s) 421
MroI TCCGGA 1 cut(s) 1675
MroXI GAANNNNTTC 1 cut(s) 2007
MscI TGGCCA 1 cut(s) 1798
MseI TTAA 5 cut(s) 1844, 1938, 2097, 2280, 2478
MslI CAYNNNNRTG 4 cut(s) 694, 775, 845, 2261
Msp20I TGGCCA 1 cut(s) 1798
MspA1I CMGCKG 1 cut(s) 1778
MspI CCGG 4 cut(s) 47, 392, 851, 1676
MunI CAATTG 1 cut(s) 1255
MvnI CGCG 2 cut(s) 120, 216
MwoI GCNNNNNNNGC 8 cut(s) 138, 153, 425, 430, 1349, 1358, 1452, 2295
NciI CCSGG 2 cut(s) 47, 852
NheI GCTAGC 1 cut(s) 1361
NlaIV GGNNCC 6 cut(s) 567, 712, 975, 2332, 2375, 2748
NmuCI GTSAC 6 cut(s) 1114, 1518, 1570, 1857, 2087, 2348
NruI TCGCGA 1 cut(s) 120
NsiI ATGCAT 1 cut(s) 421
NspI RCATGY 3 cut(s) 740, 1347, 2182
PagI TCATGA 2 cut(s) 1470, 2530
PciI ACATGT 1 cut(s) 2178
PcsI WCGNNNNNNNCGW 2 cut(s) 1599, 2688
PdmI GAANNNNTTC 1 cut(s) 2007
PfeI GAWTC 4 cut(s) 191, 252, 1043, 1376
PflMI CCANNNNNTGG 1 cut(s) 762
PfoI TCCNGGA 1 cut(s) 2716
PinAI ACCGGT 1 cut(s) 391
PkrI GCNGC 2 cut(s) 44, 1902
PleI GAGTC 2 cut(s) 251, 1121
PpsI GAGTC 2 cut(s) 251, 1121
Ppu21I YACGTR 2 cut(s) 506, 1594
PscI ACATGT 1 cut(s) 2178
PsiI TTATAA 2 cut(s) 1080, 2499
Psp124BI GAGCTC 3 cut(s) 87, 503, 1250
PspEI GGTNACC 1 cut(s) 2348
PspFI CCCAGC 1 cut(s) 1745
PspN4I GGNNCC 6 cut(s) 567, 712, 975, 2332, 2375, 2748
PspPI GGNCC 3 cut(s) 173, 710, 2747
PsrI GAACNNNNNNTAC 2 cut(s) 2206, 2238
PstNI CAGNNNCTG 2 cut(s) 762, 1646
PsuI RGATCY 2 cut(s) 565, 2107
PvuII CAGCTG 1 cut(s) 1778
RruI TCGCGA 1 cut(s) 120
RsaI GTAC 5 cut(s) 272, 436, 1596, 2147, 2177
RsaNI GTAC 5 cut(s) 271, 435, 1595, 2146, 2176
RseI CAYNNNNRTG 4 cut(s) 694, 775, 845, 2261
SacI GAGCTC 3 cut(s) 87, 503, 1250
SaqAI TTAA 5 cut(s) 1844, 1938, 2097, 2280, 2478
SatI GCNGC 2 cut(s) 43, 1901
Sau96I GGNCC 3 cut(s) 173, 710, 2747
SchI GAGTC 2 cut(s) 251, 1122
SduI GDGCHC 6 cut(s) 87, 503, 842, 1171, 1250, 2378
SexAI ACCWGGT 1 cut(s) 976
SfaNI GCATC 4 cut(s) 406, 686, 1808, 2531
SfcI CTRYAG 2 cut(s) 1552, 2409
SinI GGWCC 2 cut(s) 173, 710
SmiMI CAYNNNNRTG 4 cut(s) 694, 775, 845, 2261
SmlI CTYRAG 3 cut(s) 1544, 2083, 2645
SmoI CTYRAG 3 cut(s) 1544, 2083, 2645
SpeI ACTAGT 1 cut(s) 1157
SsiI CCGC 5 cut(s) 40, 43, 176, 569, 1032
SstI GAGCTC 3 cut(s) 87, 503, 1250
StyI CCWWGG 2 cut(s) 1241, 1561
TaaI ACNGT 8 cut(s) 629, 890, 1556, 1642, 1855, 1994, 2354, 2591
TaiI ACGT 5 cut(s) 126, 508, 1520, 1596, 1605
TaqI TCGA 1 cut(s) 255
TatI WGTACW 3 cut(s) 270, 2145, 2175
TauI GCSGC 1 cut(s) 45
TfiI GAWTC 4 cut(s) 191, 252, 1043, 1376
Tru1I TTAA 5 cut(s) 1844, 1938, 2097, 2280, 2478
Tru9I TTAA 5 cut(s) 1844, 1938, 2097, 2280, 2478
TscAI CASTG 4 cut(s) 171, 634, 763, 893
TseFI GTSAC 6 cut(s) 1114, 1518, 1570, 1857, 2087, 2348
TseI GCWGC 1 cut(s) 1900
Tsp45I GTSAC 6 cut(s) 1114, 1518, 1570, 1857, 2087, 2348
TspGWI ACGGA 1 cut(s) 1895
TspRI CASTG 4 cut(s) 171, 634, 763, 893
Van91I CCANNNNNTGG 1 cut(s) 762
VneI GTGCAC 1 cut(s) 838
VpaK11BI GGWCC 2 cut(s) 173, 710
XapI RAATTY 6 cut(s) 937, 953, 1192, 1389, 1491, 1763
XbaI TCTAGA 1 cut(s) 2488
XceI RCATGY 3 cut(s) 740, 1347, 2182
XcmI CCANNNNNNNNNTGG 1 cut(s) 1996
XmaJI CCTAGG 1 cut(s) 1561
XmnI GAANNNNTTC 1 cut(s) 2007
Zsp2I ATGCAT 1 cut(s) 421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.