pycom08g16060

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0000630
Physical Location & Seq
Forward (+)
15952660 .. 15958733
6074 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g16060.10

Sequence Viewer

Length: 2214 bp
ATGGAGACAAGCGACCACCATTTAGGTGGCTCATTATTGGGCCACAGAGGTCTGGTGCCTCCTGGCATGTTGATCCCAGCTCTGACCAGTGCCTGGAATACGCTACTAGTTGGCCGTAAGAGGTGGGCCCTGTATCCTCCAGGAAGAGTACCACTAGGTGTCACGGTACATGTAAACGAAGAAGATGGTGATGTCAATATCGAAACTCCATCTTCACTGCAGTGGTGGCTAGATTTTTATCCACTTCTTGCTGATAAAGACAAACCAATAGAGTGTACCCAACTTCCAGGGGAAACGATTTTCGTTCCAAGTGGATGGTGGCACTGTGTCCTAAATCTGGAACCAAGTATTGCCGTTACCCAGAACTTTGTAAATCCCAAAAATTTTGAATTTGTGTGTTTAGACATGGCACCTGGTTATCATCATAAGGGAGTTTGCCGTGCTGGATTACTTGCACATGAAGAAGGAATTTCAGATGATGCCACAAATAATAAAGAGGATTCTGGTATCTCTGATCCAATTAGGAAAGTGAAAAGAGTCAGGACTCTTGAACCTGGAGAAAAAAAGAATGCTGATGTTGATTCTAATGACCATGATTTACAACAAAGAAGTTACCAGGGGTTTTCTTATGACATAAAATTTTTAGCCATGTATCTGGATAAAGAGAGAGATCACTACAACTCTCCTTGGAGCTCTGGCAATTGCATAGGACAACGAGAAATGAGAGAATGGTTATTTAAGCTTTGGTTTGCAAAAGCAGGAATGAGAGACTTAATCTGGAAGGGAGCTTGTCTTGCATTAAACGCGGGGAGATGGTCTGAATGCCTGTCAGAAATTTGTGCATTCCATAATTTGCCTCATCCAGCAGAAGATGAGAAGCTTCCCGTTGGCACGGGTAGCAATCCTGTTTATCTCTTCAGCGACTGCGTAGTCAAAATTTTTGTTGAAGAAGGGCTGGAAAGATCACTTTATGGTCTAGGCACAGAGCTAGAGTTTTACAATCTCCTATGCAAAGTCAACTCCCCTCTGAAAAATCACATGCCTGATGTTTTGGAAAGTGGGATCATTTATCTTGAGAATGGAATTTACAGAATTATACCATGGGATGCCAAAACAGTTCCTGATGTGATTGCCAGATGCAATCTTATTCCTGAGAAGTTAAATGCAGATGTTTGTCCTTTTGGCGTATGGAGTAAGAAACAGTTTAATTACAGAAAGGCCGGGATGCCAACAAATGAAACCATCGGCTCACCTGAATGCAGAAGAATATGGCCATATCTTATAACAAAACGATGCAAAGGAAAAATATATGCAGAGTTAAGAGATACGATTTCATTGGAAGGCGCACTGAACTTAGCATCCTTTCTGGGAGAGCAGCTCCGCAACCTCCATCTCTTGCCTCAACCACCTCTAAGCATCTCAACTTTTTTGGATATTGAACCAGAAATAGATATGCCTTTAACTTATGGTTTTATGGAGGCTGTTCAGGATAAATCAGAAGTTCCAGCTGAATGGAATATTTTCATCAGAACTCTATTCAGGAAGAAGAAGGATGCCTCAAGTCGCTTGAGTAAATGGGGAGATCCAATTCCTACCACACTAATCGAGAAAGTTGATGAATACTTACCAGATGATTTGGCCAAGTTCCTTCACATATTTGAGGATGAAAATGGCTTAAACAAGGTGGGTAAACTTTGTTCCTGGATACACTCAGATATTATGGATGATAATATTCACATGGAACCATGTGGTGCTAATTCTTGCCTGATTGAGAACACCAAAGACAATGGCCTGGTAACCAATGGTTCAGTGAATGGAAATGGCATCAGTGCAGGGACTAAATCATGGCGTCCTAGCCACATTCTTGATTTCAGTGATCTTTCTATAGGTGACCCCATTTATGATATAATACCCATATATTTGGATGTATTTAGAGGTGATACATGTCTCCTTAAGCAACTTTTAGAAAGTTATAAACTTCCATTAGTGAGTGCAGAATCACAGAAAAAGTCTGTTAAGGGTGGAGACAAGTTTGGACAGCTTTCCTACCACGCGATGTGCTACTGTATTCTGCATGACGAGAATGTATTGGGAGCCATTTTTAGTATCTGGGACGAACTCAAGACGGCGAAAACATGGGAAGAAGTTGAGCAAGTAGTGTGGGGAGAGTTGAATAATTACAAAGGGTTTCCCCTGGATCGATCTAAAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
APH Cupin_8 F-box F-box-like JmjC

Protein Analysis

738

Amino Acids

83.29

Weight (kDa)

5.36

Isoelectric Point (pI)

42.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000630)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78280
fragaria_vesca FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800
malus_domestica MD08G1186800.v1.1 MD15G1372700.v1.1
prunus_persica Prupe.1G521300_v2.0.a1 Prupe.1G521300_v2.0.a1
pyrus_communis pycom08g16060 pycom15g33370
rosa_chinensis RchiOBHm_Chr2g0139391 RchiOBHm_Chr7g0242931 RchiOBHm_Chr7g0242951 RchiOBHm_Chr7g0243001 RchiOBHm_Chr7g0243011 RchiOBHm_Chr7g0243141 RchiOBHm_Chr7g0243151 RchiOBHm_Chr7g0243351
rosa_laevigata RLG00000000853 RLG00000000857 RLG00000000858 RLG00000000863 RLG00000000867
rosa_multiflora Rmu_co8457323.1_g000001 Rmu_sc0000083.1_g000017 Rmu_sc0000679.1_g000021 Rmu_sc0001036.1_g000029 Rmu_sc0001036.1_g000032 Rmu_sc0001176.1_g000015 Rmu_sc0001461.1_g000002 Rmu_sc0001461.1_g000003 Rmu_sc0001461.1_g000056 Rmu_sc0001461.1_g000057 Rmu_sc0001461.1_g000098 Rmu_sc0001461.1_g000105 Rmu_sc0004165.1_g000084 Rmu_sc0006141.1_g000004 Rmu_sc0033806.1_g000001
rosa_roxburghii Rroxscaffold_3G00222160 Rroxscaffold_3G00222220 Rroxscaffold_4G00316290
rosa_rugosa Rorug07G0318400 Rorug07G0318400 Rorug07G0318600
rosa_samantha Rh4CG066500 Rh5DG444300 Rh7AG473700 Rh7AG473900 Rh7AG474000 Rh7AG474600 Rh7AG474800 Rh7BG444500 Rh7BG444700 Rh7CG490700 Rh7CG490800 Rh7CG491000 Rh7DG458900 Rh7DG459000 Rh7DG459300
rosa_wichuraiana Rw7G038970 Rw7G039050 Rw7G039420 Rw7G039480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1283, 1974
AasI GACNNNNNNGTC 1 cut(s) 929
AccB1I GGYRCC 2 cut(s) 55, 409
AccB7I CCANNNNNTGG 1 cut(s) 93
AccII CGCG 2 cut(s) 806, 2054
AciI CCGC 2 cut(s) 806, 1381
AclWI GGATC 5 cut(s) 67, 509, 1070, 1577, 2205
AcoI YGGCCR 3 cut(s) 112, 1271, 1638
AcsI RAATTY 8 cut(s) 382, 389, 468, 638, 834, 936, 1083, 2208
AcuI CTGAAG 1 cut(s) 901
AcyI GRCGYC 1 cut(s) 1849
AdeI CACNNNGTG 1 cut(s) 158
AfaI GTAC 3 cut(s) 150, 168, 277
AfiI CCNNNNNNNGG 2 cut(s) 93, 337
AflII CTTAAG 1 cut(s) 1952
AflIII ACRYGT 2 cut(s) 169, 1943
AgsI TTSAA 5 cut(s) 389, 551, 947, 1439, 2173
AhlI ACTAGT 1 cut(s) 106
AleI CACNNNNGTG 1 cut(s) 220
AloI GAACNNNNNNTCC 2 cut(s) 1343, 1375
AluBI AGCT 9 cut(s) 80, 693, 742, 788, 880, 988, 1378, 1508, 2041
AluI AGCT 9 cut(s) 80, 693, 742, 788, 880, 988, 1378, 1508, 2041
Alw21I GWGCWC 1 cut(s) 695
Alw26I GTCTC 3 cut(s) 762, 1952, 2019
AlwI GGATC 5 cut(s) 67, 509, 1070, 1577, 2205
AlwNI CAGNNNCTG 3 cut(s) 93, 924, 1121
AoxI GGCC 7 cut(s) 40, 112, 126, 1218, 1271, 1638, 1789
ApaI GGGCCC 1 cut(s) 130
ApeKI GCWGC 1 cut(s) 1375
ApoI RAATTY 8 cut(s) 382, 389, 468, 638, 834, 936, 1083, 2208
Asp700I GAANNNNTTC 1 cut(s) 1520
AspLEI GCGC 1 cut(s) 1346
AspS9I GGNCC 3 cut(s) 40, 126, 127
AsuC2I CCSGG 1 cut(s) 1222
AsuHPI GGTGA 4 cut(s) 200, 1242, 1901, 1949
BaeGI GKGCMC 1 cut(s) 130
BalI TGGCCA 2 cut(s) 1273, 1640
BanI GGYRCC 2 cut(s) 55, 409
BanII GRGCYC 2 cut(s) 130, 695
Bbv12I GWGCWC 1 cut(s) 695
BbvI GCAGC 1 cut(s) 1387
BccI CCATC 6 cut(s) 179, 217, 309, 807, 1250, 1398
BceAI ACGGC 4 cut(s) 99, 338, 423, 2142
BciVI GTATCC 2 cut(s) 144, 1698
BcnI CCSGG 1 cut(s) 1222
BcoDI GTCTC 3 cut(s) 762, 1952, 2019
BcuI ACTAGT 1 cut(s) 106
BfaI CTAG 6 cut(s) 107, 155, 230, 977, 989, 1854
BfmI CTRYAG 2 cut(s) 218, 1884
BfrI CTTAAG 1 cut(s) 1952
BfuI GTATCC 2 cut(s) 144, 1698
BisI GCNGC 1 cut(s) 1376
BlsI GCNGC 1 cut(s) 1377
BmgT120I GGNCC 3 cut(s) 40, 126, 127
BmiI GGNNCC 6 cut(s) 57, 128, 342, 411, 1743, 2095
BmsI GCATC 9 cut(s) 469, 1096, 1127, 1215, 1283, 1367, 1425, 1543, 1833
BplI GAGNNNNNCTC 2 cut(s) 1362, 1394
BpmI CTGGAG 2 cut(s) 123, 576
BpuEI CTTGAG 4 cut(s) 1094, 1543, 1588, 2105
BpuMI CCSGG 1 cut(s) 1222
Bsa29I ATCGAT 1 cut(s) 2200
BsaBI GATNNNNATC 1 cut(s) 237
BsaHI GRCGYC 1 cut(s) 1849
BsaJI CCNNGG 5 cut(s) 287, 616, 686, 1100, 2193
Bsc4I CCNNNNNNNGG 2 cut(s) 93, 337
Bse1I ACTGG 1 cut(s) 87
Bse8I GATNNNNATC 1 cut(s) 237
BseCI ATCGAT 1 cut(s) 2200
BseDI CCNNGG 5 cut(s) 287, 616, 686, 1100, 2193
BseGI GGATG 9 cut(s) 320, 859, 1111, 1230, 1358, 1558, 1669, 1729, 1930
BseJI GATNNNNATC 1 cut(s) 237
BseLI CCNNNNNNNGG 2 cut(s) 93, 337
BseMII CTCAG 2 cut(s) 1143, 1725
BseNI ACTGG 1 cut(s) 87
BseSI GKGCMC 1 cut(s) 130
BseXI GCAGC 1 cut(s) 1387
BseYI CCCAGC 1 cut(s) 76
BsgI GTGCAG 2 cut(s) 1851, 2013
Bsh1236I CGCG 2 cut(s) 806, 2054
BshFI GGCC 7 cut(s) 42, 114, 128, 1220, 1273, 1640, 1791
BshNI GGYRCC 2 cut(s) 55, 409
BshVI ATCGAT 1 cut(s) 2200
BsiHKAI GWGCWC 1 cut(s) 695
BsiSI CCGG 1 cut(s) 1221
BslFI GGGAC 2 cut(s) 1849, 2126
BslI CCNNNNNNNGG 2 cut(s) 93, 337
BsmAI GTCTC 3 cut(s) 762, 1952, 2019
BsmFI GGGAC 2 cut(s) 1849, 2126
BsmI GAATGC 4 cut(s) 574, 827, 842, 1262
BsnI GGCC 7 cut(s) 42, 114, 128, 1220, 1273, 1640, 1791
Bsp120I GGGCCC 1 cut(s) 126
Bsp1286I GDGCHC 2 cut(s) 130, 695
Bsp143I GATC 9 cut(s) 72, 514, 670, 962, 1062, 1582, 1876, 2197, 2201
Bsp19I CCATGG 1 cut(s) 1100
BspACI CCGC 2 cut(s) 806, 1381
BspANI GGCC 7 cut(s) 42, 114, 128, 1220, 1273, 1640, 1791
BspCNI CTCAG 2 cut(s) 1144, 1724
BspDI ATCGAT 1 cut(s) 2200
BspFNI CGCG 2 cut(s) 806, 2054
BspLI GGNNCC 6 cut(s) 57, 128, 342, 411, 1743, 2095
BspMAI CTGCAG 1 cut(s) 222
BspPI GGATC 5 cut(s) 67, 509, 1070, 1577, 2205
BspT107I GGYRCC 2 cut(s) 55, 409
BspTI CTTAAG 1 cut(s) 1952
BsrI ACTGG 1 cut(s) 87
BssECI CCNNGG 5 cut(s) 287, 616, 686, 1100, 2193
BssMI GATC 9 cut(s) 72, 514, 670, 962, 1062, 1582, 1876, 2197, 2201
BssNI GRCGYC 1 cut(s) 1849
BssT1I CCWWGG 2 cut(s) 686, 1100
Bst4CI ACNGT 5 cut(s) 166, 326, 1117, 1203, 2066
Bst6I CTCTTC 2 cut(s) 139, 920
BstACI GRCGYC 1 cut(s) 1849
BstAFI CTTAAG 1 cut(s) 1952
BstDEI CTNAG 4 cut(s) 1152, 1354, 1412, 1711
BstDSI CCRYGG 1 cut(s) 1100
BstEII GGTNACC 2 cut(s) 1795, 1889
BstF5I GGATG 9 cut(s) 320, 859, 1111, 1230, 1358, 1558, 1669, 1729, 1930
BstFNI CGCG 2 cut(s) 806, 2054
BstHHI GCGC 1 cut(s) 1346
BstKTI GATC 9 cut(s) 75, 517, 673, 965, 1065, 1585, 1879, 2200, 2204
BstMAI GTCTC 3 cut(s) 762, 1952, 2019
BstMBI GATC 9 cut(s) 72, 514, 670, 962, 1062, 1582, 1876, 2197, 2201
BstMWI GCNNNNNNNGC 4 cut(s) 226, 794, 803, 897
BstNSI RCATGY 4 cut(s) 70, 173, 1042, 1947
BstPI GGTNACC 2 cut(s) 1795, 1889
BstSFI CTRYAG 2 cut(s) 218, 1884
BstSLI GKGCMC 1 cut(s) 130
BstUI CGCG 2 cut(s) 806, 2054
BstV1I GCAGC 1 cut(s) 1387
BstX2I RGATCY 1 cut(s) 1582
BstXI CCANNNNNNTGG 5 cut(s) 26, 315, 655, 1512, 1921
BstYI RGATCY 1 cut(s) 1582
Bsu15I ATCGAT 1 cut(s) 2200
BsuI GTATCC 2 cut(s) 144, 1698
BsuRI GGCC 7 cut(s) 42, 114, 128, 1220, 1273, 1640, 1791
BsuTUI ATCGAT 1 cut(s) 2200
BtgI CCRYGG 1 cut(s) 1100
BtgZI GCGATG 1 cut(s) 2069
BtsCI GGATG 9 cut(s) 320, 859, 1111, 1230, 1358, 1558, 1669, 1729, 1930
BtsI GCAGTG 2 cut(s) 215, 227
BtsIMutI CAGTG 8 cut(s) 94, 215, 227, 322, 1346, 1815, 1834, 1879
CaiI CAGNNNCTG 3 cut(s) 93, 924, 1121
CfoI GCGC 1 cut(s) 1346
Cfr13I GGNCC 3 cut(s) 40, 126, 127
ClaI ATCGAT 1 cut(s) 2200
CseI GACGC 1 cut(s) 1838
CsiI ACCWGGT 1 cut(s) 412
Csp6I GTAC 3 cut(s) 149, 167, 276
CspCI CAANNNNNGTGG 2 cut(s) 2141, 2176
CviQI GTAC 3 cut(s) 149, 167, 276
DdeI CTNAG 4 cut(s) 1152, 1354, 1412, 1711
DpnI GATC 9 cut(s) 74, 516, 672, 964, 1064, 1584, 1878, 2199, 2203
DpnII GATC 9 cut(s) 72, 514, 670, 962, 1062, 1582, 1876, 2197, 2201
DraIII CACNNNGTG 1 cut(s) 158
DrdI GACNNNNNNGTC 1 cut(s) 929
DseDI GACNNNNNNGTC 1 cut(s) 929
EaeI YGGCCR 3 cut(s) 112, 1271, 1638
Eam1104I CTCTTC 2 cut(s) 139, 920
EarI CTCTTC 2 cut(s) 139, 920
Ecl136II GAGCTC 1 cut(s) 693
Eco130I CCWWGG 2 cut(s) 686, 1100
Eco24I GRGCYC 2 cut(s) 130, 695
Eco53kI GAGCTC 1 cut(s) 693
Eco57I CTGAAG 1 cut(s) 901
Eco91I GGTNACC 2 cut(s) 1795, 1889
EcoICRI GAGCTC 1 cut(s) 693
EcoO109I RGGNCCY 1 cut(s) 127
EcoO65I GGTNACC 2 cut(s) 1795, 1889
EcoT14I CCWWGG 2 cut(s) 686, 1100
EcoT38I GRGCYC 2 cut(s) 130, 695
ErhI CCWWGG 2 cut(s) 686, 1100
FaqI GGGAC 2 cut(s) 1849, 2126
FauI CCCGC 1 cut(s) 799
Fnu4HI GCNGC 1 cut(s) 1376
FokI GGATG 9 cut(s) 327, 846, 1118, 1237, 1345, 1565, 1676, 1736, 1937
FriOI GRGCYC 2 cut(s) 130, 695
Fsp4HI GCNGC 1 cut(s) 1376
FspBI CTAG 6 cut(s) 107, 155, 230, 977, 989, 1854
GlaI GCGC 1 cut(s) 1345
GluI GCNGC 1 cut(s) 1376
GsaI CCCAGC 1 cut(s) 80
GsuI CTGGAG 2 cut(s) 123, 576
HaeIII GGCC 7 cut(s) 42, 114, 128, 1220, 1273, 1640, 1791
HapII CCGG 1 cut(s) 1221
HgaI GACGC 1 cut(s) 1838
HhaI GCGC 1 cut(s) 1346
Hin1I GRCGYC 1 cut(s) 1849
Hin6I GCGC 1 cut(s) 1344
HinP1I GCGC 1 cut(s) 1344
HincII GTYRAC 1 cut(s) 1018
HindII GTYRAC 1 cut(s) 1018
HindIII AAGCTT 2 cut(s) 740, 878
HinfI GANTC 5 cut(s) 500, 537, 544, 581, 1997
HpaII CCGG 1 cut(s) 1221
HphI GGTGA 4 cut(s) 200, 1242, 1901, 1949
Hpy166II GTNNAC 4 cut(s) 175, 276, 1018, 1691
Hpy188I TCNGA 9 cut(s) 84, 475, 514, 820, 832, 1029, 1498, 1529, 1714
Hpy8I GTNNAC 4 cut(s) 175, 276, 1018, 1691
HpyAV CCTTC 6 cut(s) 458, 775, 944, 1334, 1543, 1658
HpyCH4III ACNGT 5 cut(s) 166, 326, 1117, 1203, 2066
HpyF10VI GCNNNNNNNGC 4 cut(s) 226, 794, 803, 897
HpyF3I CTNAG 4 cut(s) 1152, 1354, 1412, 1711
Hsp92I GRCGYC 1 cut(s) 1849
HspAI GCGC 1 cut(s) 1344
Kzo9I GATC 9 cut(s) 72, 514, 670, 962, 1062, 1582, 1876, 2197, 2201
LmnI GCTCC 4 cut(s) 690, 785, 1383, 2093
Lsp1109I GCAGC 1 cut(s) 1387
LweI GCATC 9 cut(s) 469, 1096, 1127, 1215, 1283, 1367, 1425, 1543, 1833
MabI ACCWGGT 1 cut(s) 412
MaeI CTAG 6 cut(s) 107, 155, 230, 977, 989, 1854
MaeIII GTNAC 5 cut(s) 160, 355, 611, 1795, 1889
MalI GATC 9 cut(s) 74, 516, 672, 964, 1064, 1584, 1878, 2199, 2203
MboI GATC 9 cut(s) 72, 514, 670, 962, 1062, 1582, 1876, 2197, 2201
MfeI CAATTG 1 cut(s) 700
MflI RGATCY 1 cut(s) 1582
MhlI GDGCHC 2 cut(s) 130, 695
MlsI TGGCCA 2 cut(s) 1273, 1640
MluNI TGGCCA 2 cut(s) 1273, 1640
MlyI GAGTC 2 cut(s) 538, 546
Mox20I TGGCCA 2 cut(s) 1273, 1640
MroXI GAANNNNTTC 1 cut(s) 1520
MscI TGGCCA 2 cut(s) 1273, 1640
MslI CAYNNNNRTG 3 cut(s) 24, 220, 1255
Msp20I TGGCCA 2 cut(s) 1273, 1640
MspA1I CMGCKG 1 cut(s) 1508
MspCI CTTAAG 1 cut(s) 1952
MspI CCGG 1 cut(s) 1221
MunI CAATTG 1 cut(s) 700
Mva1269I GAATGC 4 cut(s) 574, 827, 842, 1262
MvnI CGCG 2 cut(s) 806, 2054
MwoI GCNNNNNNNGC 4 cut(s) 226, 794, 803, 897
NciI CCSGG 1 cut(s) 1222
NcoI CCATGG 1 cut(s) 1100
NdeII GATC 9 cut(s) 72, 514, 670, 962, 1062, 1582, 1876, 2197, 2201
NlaIV GGNNCC 6 cut(s) 57, 128, 342, 411, 1743, 2095
NmuCI GTSAC 2 cut(s) 160, 1889
NspI RCATGY 4 cut(s) 70, 173, 1042, 1947
OliI CACNNNNGTG 1 cut(s) 220
PciI ACATGT 2 cut(s) 169, 1943
PctI GAATGC 4 cut(s) 574, 827, 842, 1262
PdmI GAANNNNTTC 1 cut(s) 1520
PfeI GAWTC 3 cut(s) 500, 581, 1997
PflMI CCANNNNNTGG 1 cut(s) 93
PfoI TCCNGGA 2 cut(s) 139, 1700
PkrI GCNGC 1 cut(s) 1377
PleI GAGTC 2 cut(s) 538, 545
PpsI GAGTC 2 cut(s) 538, 545
PscI ACATGT 2 cut(s) 169, 1943
PsiI TTATAA 2 cut(s) 1283, 1974
Psp124BI GAGCTC 1 cut(s) 695
PspEI GGTNACC 2 cut(s) 1795, 1889
PspFI CCCAGC 1 cut(s) 76
PspN4I GGNNCC 6 cut(s) 57, 128, 342, 411, 1743, 2095
PspOMI GGGCCC 1 cut(s) 126
PspPI GGNCC 3 cut(s) 40, 126, 127
PsrI GAACNNNNNNTAC 2 cut(s) 1681, 1713
PstI CTGCAG 1 cut(s) 222
PstNI CAGNNNCTG 3 cut(s) 93, 924, 1121
PsuI RGATCY 1 cut(s) 1582
PvuII CAGCTG 1 cut(s) 1508
RsaI GTAC 3 cut(s) 150, 168, 277
RsaNI GTAC 3 cut(s) 149, 167, 276
RseI CAYNNNNRTG 3 cut(s) 24, 220, 1255
SacI GAGCTC 1 cut(s) 695
SatI GCNGC 1 cut(s) 1376
Sau3AI GATC 9 cut(s) 72, 514, 670, 962, 1062, 1582, 1876, 2197, 2201
Sau96I GGNCC 3 cut(s) 40, 126, 127
SchI GAGTC 2 cut(s) 538, 546
SduI GDGCHC 2 cut(s) 130, 695
SexAI ACCWGGT 1 cut(s) 412
SfaNI GCATC 9 cut(s) 469, 1096, 1127, 1215, 1283, 1367, 1425, 1543, 1833
SfcI CTRYAG 2 cut(s) 218, 1884
SmiMI CAYNNNNRTG 3 cut(s) 24, 220, 1255
SmlI CTYRAG 5 cut(s) 1073, 1558, 1567, 1952, 2120
SmoI CTYRAG 5 cut(s) 1073, 1558, 1567, 1952, 2120
SpeI ACTAGT 1 cut(s) 106
SsiI CCGC 2 cut(s) 806, 1381
SspI AATATT 2 cut(s) 1519, 1732
SspMI CTAG 6 cut(s) 107, 155, 230, 977, 989, 1854
SstI GAGCTC 1 cut(s) 695
StyI CCWWGG 2 cut(s) 686, 1100
TaaI ACNGT 5 cut(s) 166, 326, 1117, 1203, 2066
TaqI TCGA 3 cut(s) 201, 1605, 2200
TfiI GAWTC 3 cut(s) 500, 581, 1997
TscAI CASTG 8 cut(s) 94, 222, 227, 329, 1353, 1815, 1834, 1879
TseFI GTSAC 2 cut(s) 160, 1889
TseI GCWGC 1 cut(s) 1375
Tsp45I GTSAC 2 cut(s) 160, 1889
TspDTI ATGAA 6 cut(s) 474, 1251, 1323, 1513, 1632, 1680
TspRI CASTG 8 cut(s) 94, 222, 227, 329, 1353, 1815, 1834, 1879
Van91I CCANNNNNTGG 1 cut(s) 93
Vha464I CTTAAG 1 cut(s) 1952
XapI RAATTY 8 cut(s) 382, 389, 468, 638, 834, 936, 1083, 2208
XceI RCATGY 4 cut(s) 70, 173, 1042, 1947
XcmI CCANNNNNNNNNTGG 2 cut(s) 23, 315
XmnI GAANNNNTTC 1 cut(s) 1520
XspI CTAG 6 cut(s) 107, 155, 230, 977, 989, 1854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.