Rmu_sc0001461.1_g000105

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001461.1
OG0000630
Physical Location & Seq
Reverse (-)
406770 .. 414245
7476 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001461.1_g000105.1.cds

Sequence Viewer

Length: 2982 bp
atggagatttccgaagcccctcccttccggccaagagatcgccgcccggacgccctcggaaacttcctagtcctccccgacgagctcatctgtaccgtcttggagttgctctctcctcgcgatgttgctcgcctctcctgcgttagcagtgtgatgtatatactttgcaatgaagagccactctggttgagtttatgcctcaacacactgaacggtccactcgagtacgaaggctcctggaaaaagacggtgctgcatttggagaatgtgtcgtatgaacgcgacgaggcttgcagaaaaccactgaattttgatggattcgactctttgttcttgtacagaagattatacaggtgtcataccacattagatggcttttcttttgacagtgggaatgtggaaagaaagggcaaaatcacagtggaagagttttcttgtggctatgatgggaagaaaccggttttgctcactggattagctgatgcatggcctgcaaggcgtacatggacacttgaccacttattgcagaattatggagatacagctttcaagatttctcaaaggagctcacgtaaaatctcaatgacattcaaggattatgtttcatatatgaaagttcagcatgatgaggatccgctttatatctttgatcacaagtttggagaggttgaacctggcttgttgaaagattacagtgtaccttatctatttcaagaggacttttttgatgttttggacaaagataagcgacctccgtttagatggctcattattggtccccagaggtctggtgcttcttggcatgttgatccagctctgaccagtgcctggaatacgcttctatgtggttgtaaaaggtgggccttgtatcctccaggaagagtacctataggtgtcacagtacatgtaaacgaagaagacggtgatgtcaatattgaaactccaacttcgttgcagtggtggctagatttttatccacttcttgctgatgaagacaagcccatagagtgcacccaaatgccgggggagacgattttcgttcctagtggatggtggcactgtgtcctaaatcttgatccatctattgctgttacccagaactttgtaaattctaagaactttgaatttgtgtgcttggatatggcacctggttatcgtcataagggagtttgccgtgctggattacttgcagatgatgaaggcagtattgaggattccacaaatcacatactccatgataaaaatgattatgattcctcagatatgactaggaaagtaaaaagagtcagaactctcaaacctggagaatgtccaagtagtgacagaactagtaatggctttcaggctttttcttatgatataaatttcttagccatgtatctggatgaagggagagatcattacaactctccttggagctcaggcaattgcatagggcaacgagaaatgagagaatggttattcaagctttgggttggaaaaccaggaatgagagacttaatctggaagggagcatgtcttgcactaaatgcgagcaaatggtcagaatccctggcagaaatttgtgccttccacaaattgccgtctccaacagatgatgagaggcttcctgttggcacgggtagcaatcctgtttatctcatgagcgactgtgtaatcaaaatttttgttgaggaaggactggaaacgtcactttatggattaggtgctgagcttgagttctacagtctcctaggcaaagtcaactcccctctgaaaaatcacatacctgacgttttggcaagtggaatcatttatcttgaaaatggaacttataaaattgtaccttgggatggcaacagagttcctgatgtgattgctaagtgcaattttattccggagaaggtcaaagtagatgtttctccttttggtgtatggagtaagaaacaatttgaatacagaaaagctggggtctcaacaaacaaatccatcagttccgctgaatatacaaggatatggccatatctcataaccaaacgatgcaaaggaaaaatatatgcagagttaagagataccgtgtcacgggaagatgaactgaacttagcttccttcctgggagagcagctccgtaacctccatcaattgccgcacccacctcttaatatctctactttctcagatattgatgcggaatcagattttcccttcaccagcagtagtatggaagctgttcccaataaatcaaacattcctgctgagtgggatatattcattagaactctatccaagaagaagaaggatgtctcaagtcgcttgattaaatggggagatccaattcctagcacactcatagagaaagttgataaatacatcccagatgattttgccaagtttctgtacatattcaaggatgaaaatggtgtgagcaaagttggtaagagttgttcgtggatacactctgatatcatggatgacaacattcacatggaactatgtggttttaattcttgcttcattggcaacgccaaaaacacttgcctggtaaagaatgggtccttggatgttgatgatgaccgtgcagagaggaaaacatggtgccctagccacattcttgatttcagtaatctttctataggtgatcccatctatgatttgatacccttatacttggatatattcagaggtgattgctgcctccttaagaggtttttagatagttataaacttcctttagtaagacaagcatcacctcatgagtatattgagggtggcgaaaagtttggacgactttcataccatgccatgtgctactgtattctacatgaagagaatgtcttgggagcaatttttagtctctgggacgaactcaagatggcaaaatcgtgggaagaagttgaacaggtcgtatggggcgagctaaataactacaaaggctttcctggatcatccacatctctctctttgttggagccgaaaactccctcaacattgttatacttttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
APH Cupin_8 F-box F-box-like JmjC

Protein Analysis

993

Amino Acids

113.26

Weight (kDa)

5.34

Isoelectric Point (pI)

43.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000630)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78280
fragaria_vesca FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800
malus_domestica MD08G1186800.v1.1 MD15G1372700.v1.1
prunus_persica Prupe.1G521300_v2.0.a1 Prupe.1G521300_v2.0.a1
pyrus_communis pycom08g16060 pycom15g33370
rosa_chinensis RchiOBHm_Chr2g0139391 RchiOBHm_Chr7g0242931 RchiOBHm_Chr7g0242951 RchiOBHm_Chr7g0243001 RchiOBHm_Chr7g0243011 RchiOBHm_Chr7g0243141 RchiOBHm_Chr7g0243151 RchiOBHm_Chr7g0243351
rosa_laevigata RLG00000000853 RLG00000000857 RLG00000000858 RLG00000000863 RLG00000000867
rosa_multiflora Rmu_co8457323.1_g000001 Rmu_sc0000083.1_g000017 Rmu_sc0000679.1_g000021 Rmu_sc0001036.1_g000029 Rmu_sc0001036.1_g000032 Rmu_sc0001176.1_g000015 Rmu_sc0001461.1_g000002 Rmu_sc0001461.1_g000003 Rmu_sc0001461.1_g000056 Rmu_sc0001461.1_g000057 Rmu_sc0001461.1_g000098 Rmu_sc0001461.1_g000105 Rmu_sc0004165.1_g000084 Rmu_sc0006141.1_g000004 Rmu_sc0033806.1_g000001
rosa_roxburghii Rroxscaffold_3G00222160 Rroxscaffold_3G00222220 Rroxscaffold_4G00316290
rosa_rugosa Rorug07G0318400 Rorug07G0318400 Rorug07G0318600
rosa_samantha Rh4CG066500 Rh5DG444300 Rh7AG473700 Rh7AG473900 Rh7AG474000 Rh7AG474600 Rh7AG474800 Rh7BG444500 Rh7BG444700 Rh7CG490700 Rh7CG490800 Rh7CG491000 Rh7DG458900 Rh7DG459000 Rh7DG459300
rosa_wichuraiana Rw7G038970 Rw7G039050 Rw7G039420 Rw7G039480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1815, 2700
AasI GACNNNNNNGTC 1 cut(s) 926
AccB1I GGYRCC 2 cut(s) 1144, 2574
AccB7I CCANNNNNTGG 1 cut(s) 828
AccII CGCG 2 cut(s) 120, 282
AccIII TCCGGA 1 cut(s) 1876
AciI CCGC 5 cut(s) 43, 635, 1977, 2126, 2168
AclWI GGATC 7 cut(s) 626, 639, 803, 1070, 2303, 2612, 2929
AcoI YGGCCR 2 cut(s) 29, 1997
AcsI RAATTY 6 cut(s) 307, 1108, 1124, 1363, 1560, 1662
AcyI GRCGYC 1 cut(s) 51
AfaI GTAC 9 cut(s) 94, 227, 338, 502, 699, 885, 903, 1824, 2378
AfiI CCNNNNNNNGG 4 cut(s) 828, 1021, 1832, 2061
AflII CTTAAG 1 cut(s) 2678
AflIII ACRYGT 1 cut(s) 904
AgeI ACCGGT 1 cut(s) 457
AhlI ACTAGT 1 cut(s) 1328
AjuI GAANNNNNNNTTGG 2 cut(s) 2519, 2551
AloI GAACNNNNNNTCC 2 cut(s) 2069, 2101
Alw21I GWGCWC 4 cut(s) 87, 569, 1013, 1421
Alw26I GTCTC 7 cut(s) 1022, 1488, 1590, 1733, 1957, 2287, 2837
Alw44I GTGCAC 1 cut(s) 1009
AlwI GGATC 7 cut(s) 626, 639, 803, 1070, 2303, 2612, 2929
AlwNI CAGNNNCTG 1 cut(s) 828
Ama87I CYCGRG 1 cut(s) 221
Aor13HI TCCGGA 1 cut(s) 1876
AoxI GGCC 4 cut(s) 29, 488, 861, 1997
ApaLI GTGCAC 1 cut(s) 1009
ApeKI GCWGC 3 cut(s) 253, 2101, 2670
ApoI RAATTY 6 cut(s) 307, 1108, 1124, 1363, 1560, 1662
AsiGI ACCGGT 1 cut(s) 457
Asp700I GAANNNNTTC 1 cut(s) 2208
AspA2I CCTAGG 1 cut(s) 1732
AspS9I GGNCC 4 cut(s) 215, 776, 861, 2532
AsuC2I CCSGG 2 cut(s) 47, 1023
AsuHPI GGTGA 5 cut(s) 935, 2179, 2627, 2675, 2718
AvaI CYCGRG 1 cut(s) 221
AvaII GGWCC 3 cut(s) 215, 776, 2532
AvrII CCTAGG 1 cut(s) 1732
BaeGI GKGCMC 2 cut(s) 1013, 2579
BalI TGGCCA 1 cut(s) 1999
BamHI GGATCC 1 cut(s) 631
BanI GGYRCC 2 cut(s) 1144, 2574
BanII GRGCYC 3 cut(s) 87, 569, 1421
BbsI GAAGAC 2 cut(s) 924, 999
Bbv12I GWGCWC 4 cut(s) 87, 569, 1013, 1421
BbvI GCAGC 3 cut(s) 240, 2113, 2657
BceAI ACGGC 2 cut(s) 1158, 1567
BciVI GTATCC 2 cut(s) 879, 2424
BclI TGATCA 1 cut(s) 649
BcnI CCSGG 2 cut(s) 47, 1023
BcoDI GTCTC 7 cut(s) 1022, 1488, 1590, 1733, 1957, 2287, 2837
BcuI ACTAGT 1 cut(s) 1328
BfaI CTAG 8 cut(s) 68, 965, 1044, 1269, 1329, 1733, 2319, 2580
BfmI CTRYAG 3 cut(s) 888, 1723, 2610
BfrI CTTAAG 1 cut(s) 2678
BfuI GTATCC 2 cut(s) 879, 2424
BglI GCCNNNNNGGC 1 cut(s) 496
BisI GCNGC 5 cut(s) 43, 254, 2102, 2126, 2671
BlnI CCTAGG 1 cut(s) 1732
BlpI GCTNAGC 1 cut(s) 1710
BlsI GCNGC 5 cut(s) 44, 255, 2103, 2127, 2672
Bme18I GGWCC 3 cut(s) 215, 776, 2532
BmeT110I CYCGRG 1 cut(s) 221
BmgT120I GGNCC 4 cut(s) 215, 776, 861, 2532
BmiI GGNNCC 7 cut(s) 235, 633, 778, 1146, 2533, 2576, 2949
BmsI GCATC 4 cut(s) 472, 2009, 2155, 2732
BpiI GAAGAC 2 cut(s) 924, 999
BplI GAGNNNNNCTC 4 cut(s) 95, 127, 2088, 2120
BpmI CTGGAG 2 cut(s) 858, 1323
Bpu10I CCTNAGC 1 cut(s) 1420
Bpu1102I GCTNAGC 1 cut(s) 1710
BpuEI CTTGAG 3 cut(s) 1736, 2269, 2831
BpuMI CCSGG 2 cut(s) 47, 1023
BsaAI YACGTR 1 cut(s) 572
BsaBI GATNNNNATC 2 cut(s) 630, 972
BsaHI GRCGYC 1 cut(s) 51
BsaI GGTCTC 1 cut(s) 1957
BsaJI CCNNGG 8 cut(s) 55, 1022, 1412, 1551, 1732, 1826, 2092, 2535
BsaWI WCCGGW 2 cut(s) 457, 1876
BsaXI ACNNNNNCTCC 6 cut(s) 218, 248, 254, 284, 556, 586
Bsc4I CCNNNNNNNGG 4 cut(s) 828, 1021, 1832, 2061
Bse118I RCCGGY 1 cut(s) 457
Bse1I ACTGG 3 cut(s) 475, 822, 1686
Bse3DI GCAATG 1 cut(s) 175
Bse8I GATNNNNATC 2 cut(s) 630, 972
BseAI TCCGGA 1 cut(s) 1876
BseDI CCNNGG 8 cut(s) 55, 1022, 1412, 1551, 1732, 1826, 2092, 2535
BseGI GGATG 9 cut(s) 1055, 1390, 1837, 2284, 2349, 2395, 2455, 2545, 2924
BseJI GATNNNNATC 2 cut(s) 630, 972
BseLI CCNNNNNNNGG 4 cut(s) 828, 1021, 1832, 2061
BseMI GCAATG 1 cut(s) 175
BseMII CTCAG 5 cut(s) 1272, 1434, 1701, 2169, 2226
BseNI ACTGG 3 cut(s) 475, 822, 1686
BseRI GAGGAG 1 cut(s) 105
BseSI GKGCMC 2 cut(s) 1013, 2579
BseXI GCAGC 3 cut(s) 240, 2113, 2657
BseYI CCCAGC 1 cut(s) 1946
BsgI GTGCAG 1 cut(s) 2577
Bsh1236I CGCG 2 cut(s) 120, 282
BshFI GGCC 4 cut(s) 31, 490, 863, 1999
BshNI GGYRCC 2 cut(s) 1144, 2574
BshTI ACCGGT 1 cut(s) 457
BsiHKAI GWGCWC 4 cut(s) 87, 569, 1013, 1421
BsiHKCI CYCGRG 1 cut(s) 221
BsiSI CCGG 5 cut(s) 28, 47, 458, 1022, 1877
BslFI GGGAC 2 cut(s) 762, 2852
BslI CCNNNNNNNGG 4 cut(s) 828, 1021, 1832, 2061
BsmAI GTCTC 7 cut(s) 1022, 1488, 1590, 1733, 1957, 2287, 2837
BsmBI CGTCTC 2 cut(s) 1022, 1590
BsmFI GGGAC 2 cut(s) 762, 2852
BsnI GGCC 4 cut(s) 31, 490, 863, 1999
Bso31I GGTCTC 1 cut(s) 1957
BsoBI CYCGRG 1 cut(s) 221
Bsp1286I GDGCHC 5 cut(s) 87, 569, 1013, 1421, 2579
Bsp13I TCCGGA 1 cut(s) 1876
Bsp1407I TGTACA 2 cut(s) 336, 2376
Bsp143I GATC 9 cut(s) 37, 631, 649, 808, 1075, 1396, 2308, 2617, 2921
Bsp1720I GCTNAGC 1 cut(s) 1710
Bsp68I TCGCGA 1 cut(s) 120
BspACI CCGC 5 cut(s) 43, 635, 1977, 2126, 2168
BspANI GGCC 4 cut(s) 31, 490, 863, 1999
BspCNI CTCAG 5 cut(s) 1271, 1433, 1702, 2168, 2227
BspEI TCCGGA 1 cut(s) 1876
BspFNI CGCG 2 cut(s) 120, 282
BspHI TCATGA 2 cut(s) 1641, 2731
BspLI GGNNCC 7 cut(s) 235, 633, 778, 1146, 2533, 2576, 2949
BspPI GGATC 7 cut(s) 626, 639, 803, 1070, 2303, 2612, 2929
BspQI GCTCTTC 1 cut(s) 168
BspT107I GGYRCC 2 cut(s) 1144, 2574
BspTI CTTAAG 1 cut(s) 2678
BspTNI GGTCTC 1 cut(s) 1957
BsrDI GCAATG 1 cut(s) 175
BsrFI RCCGGY 1 cut(s) 457
BsrGI TGTACA 2 cut(s) 336, 2376
BsrI ACTGG 3 cut(s) 475, 822, 1686
BssAI RCCGGY 1 cut(s) 457
BssECI CCNNGG 8 cut(s) 55, 1022, 1412, 1551, 1732, 1826, 2092, 2535
BssMI GATC 9 cut(s) 37, 631, 649, 808, 1075, 1396, 2308, 2617, 2921
BssNI GRCGYC 1 cut(s) 51
BssT1I CCWWGG 4 cut(s) 1412, 1732, 1826, 2535
Bst6I CTCTTC 4 cut(s) 168, 420, 874, 2799
BstACI GRCGYC 1 cut(s) 51
BstAFI CTTAAG 1 cut(s) 2678
BstAPI GCANNNNNTGC 3 cut(s) 491, 1520, 1529
BstAUI TGTACA 2 cut(s) 336, 2376
BstBAI YACGTR 1 cut(s) 572
BstC8I GCNNGC 5 cut(s) 130, 292, 492, 1534, 2894
BstDEI CTNAG 9 cut(s) 1113, 1258, 1369, 1420, 1710, 1860, 2080, 2155, 2235
BstF5I GGATG 9 cut(s) 1055, 1390, 1837, 2284, 2349, 2395, 2455, 2545, 2924
BstFNI CGCG 2 cut(s) 120, 282
BstKTI GATC 9 cut(s) 40, 634, 652, 811, 1078, 1399, 2311, 2620, 2924
BstMAI GTCTC 7 cut(s) 1022, 1488, 1590, 1733, 1957, 2287, 2837
BstMBI GATC 9 cut(s) 37, 631, 649, 808, 1075, 1396, 2308, 2617, 2921
BstMWI GCNNNNNNNGC 8 cut(s) 138, 491, 496, 961, 1520, 1529, 1623, 2496
BstNSI RCATGY 3 cut(s) 806, 908, 1518
BstSFI CTRYAG 3 cut(s) 888, 1723, 2610
BstSLI GKGCMC 2 cut(s) 1013, 2579
BstUI CGCG 2 cut(s) 120, 282
BstV1I GCAGC 3 cut(s) 240, 2113, 2657
BstV2I GAAGAC 2 cut(s) 924, 999
BstX2I RGATCY 2 cut(s) 631, 2308
BstXI CCANNNNNNTGG 2 cut(s) 788, 1381
BstYI RGATCY 2 cut(s) 631, 2308
BsuI GTATCC 2 cut(s) 879, 2424
BsuRI GGCC 4 cut(s) 31, 490, 863, 1999
BtgZI GCGATG 1 cut(s) 135
BtsCI GGATG 9 cut(s) 1055, 1390, 1837, 2284, 2349, 2395, 2455, 2545, 2924
BtsI GCAGTG 2 cut(s) 154, 962
BtuMI TCGCGA 1 cut(s) 120
Cac8I GCNNGC 5 cut(s) 130, 292, 492, 1534, 2894
CaiI CAGNNNCTG 1 cut(s) 828
CciI TCATGA 2 cut(s) 1641, 2731
Cfr10I RCCGGY 1 cut(s) 457
Cfr13I GGNCC 4 cut(s) 215, 776, 861, 2532
CseI GACGC 1 cut(s) 59
CsiI ACCWGGT 1 cut(s) 1147
Csp6I GTAC 9 cut(s) 93, 226, 337, 501, 698, 884, 902, 1823, 2377
CspAI ACCGGT 1 cut(s) 457
CspCI CAANNNNNGTGG 2 cut(s) 168, 203
CviQI GTAC 9 cut(s) 93, 226, 337, 501, 698, 884, 902, 1823, 2377
DdeI CTNAG 9 cut(s) 1113, 1258, 1369, 1420, 1710, 1860, 2080, 2155, 2235
DpnI GATC 9 cut(s) 39, 633, 651, 810, 1077, 1398, 2310, 2619, 2923
DpnII GATC 9 cut(s) 37, 631, 649, 808, 1075, 1396, 2308, 2617, 2921
DrdI GACNNNNNNGTC 1 cut(s) 926
DseDI GACNNNNNNGTC 1 cut(s) 926
EaeI YGGCCR 2 cut(s) 29, 1997
Eam1104I CTCTTC 4 cut(s) 168, 420, 874, 2799
EarI CTCTTC 4 cut(s) 168, 420, 874, 2799
Ecl136II GAGCTC 3 cut(s) 85, 567, 1419
Eco130I CCWWGG 4 cut(s) 1412, 1732, 1826, 2535
Eco24I GRGCYC 3 cut(s) 87, 569, 1421
Eco31I GGTCTC 1 cut(s) 1957
Eco32I GATATC 1 cut(s) 2443
Eco47I GGWCC 3 cut(s) 215, 776, 2532
Eco53kI GAGCTC 3 cut(s) 85, 567, 1419
Eco88I CYCGRG 1 cut(s) 221
EcoICRI GAGCTC 3 cut(s) 85, 567, 1419
EcoO109I RGGNCCY 1 cut(s) 2532
EcoRV GATATC 1 cut(s) 2443
EcoT14I CCWWGG 4 cut(s) 1412, 1732, 1826, 2535
EcoT22I ATGCAT 1 cut(s) 487
EcoT38I GRGCYC 3 cut(s) 87, 569, 1421
ErhI CCWWGG 4 cut(s) 1412, 1732, 1826, 2535
Esp3I CGTCTC 2 cut(s) 1022, 1590
FaqI GGGAC 2 cut(s) 762, 2852
FbaI TGATCA 1 cut(s) 649
Fnu4HI GCNGC 5 cut(s) 43, 254, 2102, 2126, 2671
FokI GGATG 9 cut(s) 1062, 1397, 1844, 2291, 2336, 2402, 2462, 2552, 2911
FriOI GRGCYC 3 cut(s) 87, 569, 1421
Fsp4HI GCNGC 5 cut(s) 43, 254, 2102, 2126, 2671
FspBI CTAG 8 cut(s) 68, 965, 1044, 1269, 1329, 1733, 2319, 2580
GluI GCNGC 5 cut(s) 43, 254, 2102, 2126, 2671
GsaI CCCAGC 1 cut(s) 1950
GsuI CTGGAG 2 cut(s) 858, 1323
HaeIII GGCC 4 cut(s) 31, 490, 863, 1999
HapII CCGG 5 cut(s) 28, 47, 458, 1022, 1877
HgaI GACGC 1 cut(s) 59
Hin1I GRCGYC 1 cut(s) 51
HincII GTYRAC 1 cut(s) 1744
HindII GTYRAC 1 cut(s) 1744
HindIII AAGCTT 1 cut(s) 1466
HinfI GANTC 8 cut(s) 318, 323, 1214, 1253, 1284, 1547, 1788, 2171
HpaII CCGG 5 cut(s) 28, 47, 458, 1022, 1877
HphI GGTGA 5 cut(s) 935, 2179, 2627, 2675, 2718
Hpy166II GTNNAC 5 cut(s) 218, 698, 910, 1011, 1744
Hpy8I GTNNAC 5 cut(s) 218, 698, 910, 1011, 1744
Hpy99I CGWCG 2 cut(s) 83, 287
HpyCH4IV ACGT 3 cut(s) 571, 1688, 1773
HpyF10VI GCNNNNNNNGC 8 cut(s) 138, 491, 496, 961, 1520, 1529, 1623, 2496
HpyF3I CTNAG 9 cut(s) 1113, 1258, 1369, 1420, 1710, 1860, 2080, 2155, 2235
HpySE526I ACGT 3 cut(s) 571, 1688, 1773
Hsp92I GRCGYC 1 cut(s) 51
Kpn2I TCCGGA 1 cut(s) 1876
Ksp22I TGATCA 1 cut(s) 649
Kzo9I GATC 9 cut(s) 37, 631, 649, 808, 1075, 1396, 2308, 2617, 2921
LguI GCTCTTC 1 cut(s) 168
LmnI GCTCC 7 cut(s) 239, 564, 1416, 1511, 2109, 2819, 2947
Lsp1109I GCAGC 3 cut(s) 240, 2113, 2657
LweI GCATC 4 cut(s) 472, 2009, 2155, 2732
MabI ACCWGGT 1 cut(s) 1147
MaeI CTAG 8 cut(s) 68, 965, 1044, 1269, 1329, 1733, 2319, 2580
MaeII ACGT 3 cut(s) 571, 1688, 1773
MaeIII GTNAC 6 cut(s) 895, 1090, 1319, 1689, 2058, 2108
MalI GATC 9 cut(s) 39, 633, 651, 810, 1077, 1398, 2310, 2619, 2923
MboI GATC 9 cut(s) 37, 631, 649, 808, 1075, 1396, 2308, 2617, 2921
MfeI CAATTG 2 cut(s) 1426, 2120
MflI RGATCY 2 cut(s) 631, 2308
MhlI GDGCHC 5 cut(s) 87, 569, 1013, 1421, 2579
MlsI TGGCCA 1 cut(s) 1999
MluNI TGGCCA 1 cut(s) 1999
MlyI GAGTC 2 cut(s) 317, 1293
MmeI TCCRAC 4 cut(s) 968, 1456, 1613, 2925
Mox20I TGGCCA 1 cut(s) 1999
Mph1103I ATGCAT 1 cut(s) 487
MroI TCCGGA 1 cut(s) 1876
MroXI GAANNNNTTC 1 cut(s) 2208
MscI TGGCCA 1 cut(s) 1999
MseI TTAA 6 cut(s) 1499, 2045, 2139, 2298, 2481, 2679
MslI CAYNNNNRTG 2 cut(s) 1016, 2462
Msp20I TGGCCA 1 cut(s) 1999
MspA1I CMGCKG 1 cut(s) 1979
MspCI CTTAAG 1 cut(s) 2678
MspI CCGG 5 cut(s) 28, 47, 458, 1022, 1877
MunI CAATTG 2 cut(s) 1426, 2120
MvnI CGCG 2 cut(s) 120, 282
MwoI GCNNNNNNNGC 8 cut(s) 138, 491, 496, 961, 1520, 1529, 1623, 2496
NciI CCSGG 2 cut(s) 47, 1023
NdeII GATC 9 cut(s) 37, 631, 649, 808, 1075, 1396, 2308, 2617, 2921
NlaIV GGNNCC 7 cut(s) 235, 633, 778, 1146, 2533, 2576, 2949
NmuCI GTSAC 4 cut(s) 895, 1319, 1689, 2058
NruI TCGCGA 1 cut(s) 120
NsiI ATGCAT 1 cut(s) 487
NspI RCATGY 3 cut(s) 806, 908, 1518
PaeR7I CTCGAG 1 cut(s) 221
PagI TCATGA 2 cut(s) 1641, 2731
PciI ACATGT 1 cut(s) 904
PciSI GCTCTTC 1 cut(s) 168
PcsI WCGNNNNNNNCGW 2 cut(s) 219, 2889
PdmI GAANNNNTTC 1 cut(s) 2208
PfeI GAWTC 6 cut(s) 318, 1214, 1253, 1547, 1788, 2171
PflMI CCANNNNNTGG 1 cut(s) 828
PfoI TCCNGGA 3 cut(s) 236, 874, 2917
PinAI ACCGGT 1 cut(s) 457
PkrI GCNGC 5 cut(s) 44, 255, 2103, 2127, 2672
PleI GAGTC 2 cut(s) 317, 1292
PpsI GAGTC 2 cut(s) 317, 1292
Ppu21I YACGTR 1 cut(s) 572
PpuMI RGGWCCY 1 cut(s) 2532
PscI ACATGT 1 cut(s) 904
PsiI TTATAA 2 cut(s) 1815, 2700
Psp124BI GAGCTC 3 cut(s) 87, 569, 1421
Psp5II RGGWCCY 1 cut(s) 2532
PspFI CCCAGC 1 cut(s) 1946
PspN4I GGNNCC 7 cut(s) 235, 633, 778, 1146, 2533, 2576, 2949
PspPI GGNCC 4 cut(s) 215, 776, 861, 2532
PspPPI RGGWCCY 1 cut(s) 2532
PspXI VCTCGAGB 1 cut(s) 221
PsrI GAACNNNNNNTAC 2 cut(s) 2407, 2439
PstNI CAGNNNCTG 1 cut(s) 828
PsuI RGATCY 2 cut(s) 631, 2308
RruI TCGCGA 1 cut(s) 120
RsaI GTAC 9 cut(s) 94, 227, 338, 502, 699, 885, 903, 1824, 2378
RsaNI GTAC 9 cut(s) 93, 226, 337, 501, 698, 884, 902, 1823, 2377
RseI CAYNNNNRTG 2 cut(s) 1016, 2462
SacI GAGCTC 3 cut(s) 87, 569, 1421
SapI GCTCTTC 1 cut(s) 168
SaqAI TTAA 6 cut(s) 1499, 2045, 2139, 2298, 2481, 2679
SatI GCNGC 5 cut(s) 43, 254, 2102, 2126, 2671
Sau3AI GATC 9 cut(s) 37, 631, 649, 808, 1075, 1396, 2308, 2617, 2921
Sau96I GGNCC 4 cut(s) 215, 776, 861, 2532
SchI GAGTC 2 cut(s) 317, 1293
SduI GDGCHC 5 cut(s) 87, 569, 1013, 1421, 2579
SexAI ACCWGGT 1 cut(s) 1147
SfaNI GCATC 4 cut(s) 472, 2009, 2155, 2732
SfcI CTRYAG 3 cut(s) 888, 1723, 2610
Sfr274I CTCGAG 1 cut(s) 221
SinI GGWCC 3 cut(s) 215, 776, 2532
SlaI CTCGAG 1 cut(s) 221
SmiMI CAYNNNNRTG 2 cut(s) 1016, 2462
SmlI CTYRAG 5 cut(s) 221, 1715, 2284, 2678, 2846
SmoI CTYRAG 5 cut(s) 221, 1715, 2284, 2678, 2846
SpeI ACTAGT 1 cut(s) 1328
SsiI CCGC 5 cut(s) 43, 635, 1977, 2126, 2168
SspI AATATT 1 cut(s) 934
SspMI CTAG 8 cut(s) 68, 965, 1044, 1269, 1329, 1733, 2319, 2580
SstI GAGCTC 3 cut(s) 87, 569, 1421
StyI CCWWGG 4 cut(s) 1412, 1732, 1826, 2535
TaiI ACGT 3 cut(s) 574, 1691, 1776
TaqI TCGA 2 cut(s) 222, 321
TatI WGTACW 3 cut(s) 336, 901, 2376
TauI GCSGC 2 cut(s) 45, 2128
TfiI GAWTC 6 cut(s) 318, 1214, 1253, 1547, 1788, 2171
Tru1I TTAA 6 cut(s) 1499, 2045, 2139, 2298, 2481, 2679
Tru9I TTAA 6 cut(s) 1499, 2045, 2139, 2298, 2481, 2679
TseFI GTSAC 4 cut(s) 895, 1319, 1689, 2058
TseI GCWGC 3 cut(s) 253, 2101, 2670
Tsp45I GTSAC 4 cut(s) 895, 1319, 1689, 2058
TspGWI ACGGA 2 cut(s) 744, 2096
Van91I CCANNNNNTGG 1 cut(s) 828
Vha464I CTTAAG 1 cut(s) 2678
VneI GTGCAC 1 cut(s) 1009
VpaK11BI GGWCC 3 cut(s) 215, 776, 2532
XapI RAATTY 6 cut(s) 307, 1108, 1124, 1363, 1560, 1662
XceI RCATGY 3 cut(s) 806, 908, 1518
XcmI CCANNNNNNNNNTGG 1 cut(s) 2197
XhoI CTCGAG 1 cut(s) 221
XmaJI CCTAGG 1 cut(s) 1732
XmnI GAANNNNTTC 1 cut(s) 2208
XspI CTAG 8 cut(s) 68, 965, 1044, 1269, 1329, 1733, 2319, 2580
Zsp2I ATGCAT 1 cut(s) 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.