Rmu_sc0001176.1_g000015

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001176.1
OG0000630
Physical Location & Seq
Reverse (-)
58000 .. 65155
7156 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001176.1_g000015.1.cds

Sequence Viewer

Length: 2841 bp
atggaggtttccgaagccccttccttccggccaagagatcgccggccggacgccctcggaaacttcctagtcctctccgacgagctcatctgtgccgtcttggagttgctctctcctcgcgacgttgctcgcctctcttgcgttagcagtgtgatgtatatactttgcaatgaagagccactctggttgactttatgcctcaacgcactgaatggtccgctccagtacaaagcatcgtggaagaagactgtgctgcatttggagaatgtgtcgtatgaacgtgacgaggcttgcagaaaaccactgagttttgatggatttgactctttgttcttgtacagaagattatacgggtgtcataccacattggatggtttttcttttgacaatgggaatgtggaaagaaaggacgagatcacattggaagagttttcttgtgattatgatgggaagaaaccggttttgctcactggattagctgatgcatggcctgcaaggcgtacatggacacttgaccacttattgcagaattatggagatacagctttcaagatttctcaaaggtgctcacgtaaaatctcaatgacattcaaagattatgtttcatatatgaaggttcagcatgatgaggatccactttatatcttcgatcacaagtttggagaggttgaacctggcttgttgaaagattacagtgtaccttatctatttcaagaggacttttttgatgttttggacaaagataagcgacctccatttagatggctcattattggtccccagaggtctggtgcttcttggcatgttgatccagctctgaccagtgcctggaatacacttctatgtggtcgtaaaaggtgggccttgtatcctccaggaagggtacctataggtgtcacagtacatgtaaacgaagaagacggtgatgtcaatattgaaactccaacttcgttgcagtggtggctagatttttatccacttcttgctgatgaagacaagcccatagagtgcacccaaatgccgggggagacgattttcgttccaagtggatggtggcactgtgtcctaaatcttgaaccatctattgctgttacccagaactttgtgaattctaagaactttgaatttgtgtgcttggatatggcacctggttatcgtcacaagggagtttgccgtgctggattacttgcagatgatgaaggcagtattgaggattccacaaatcatatactctatgataaagatgataataattcctcagatatgactaggaaagtaaaaagagtcagaactctcaaacctggagaatatcctagtactgaaagaactagtaatggtgctcagggtttttcttatgatgtaaatttcttagccatgtatctggatgaagagagagatcattacaactctccttggagctcaggcaattgcatagggcaacgagaaatgagagaatggttattcaagctttgggttggaaaaccaggaatgagagacttgatctggaagggagcatgtctcgcactaaatgctagcaaatggtcagaatccctggcagaaatttgtgccttccacaaattgccttctccaacagatgatgagaggcttccagttggcacgggtagcaatcctctcgagttctacagtctcctaggcaaagtcaactcccctctgaaaaatcaagtacctgacgttttggcaagtgggatcatttatcttgaacatggaacatataaaattgtaccttgggatggcatcagagttcctgatgtgattgctaactgcaattttattccggagaaggtcaaaggagatgtttctccttttggtgtatggaggaagaaacaatttgaatacagaaaagctggggtctcaacaaacgaatccatcagttcagctgaatatacaaggatatggccatatctcataacaaaacgatgcaaaggaaaaatatatgcagagttaagagatactgtgtcacgggaagatgaactgaacttagcttccttcctgggagagcagctccatattgaacaggaatcagattttccattgaccagcggtagtatggaagctgttcccaataaattaaacattcctgctgaatgggatatattcattagaactctatccaagaagaagaaggatgtctcaagtcgcttgattaaatggggagatccaattcctagcacactcatagagaaagttgacaagtacatcccagatgattttgccaagtttctgtacatgttcaaggatgaaaatggtgtgagcaaagttggtaaaagttgttcatggatacactctgatatcatggatgacaacattcacatggaactatgtggttttaattcttgcttcattggcaacgccaaagacactggcctggtaaataatggttccttgaatgttggtggtgaccgtgcagagaggaaaacatggtgccctagccacattcttgatttcagtaatctttctataggtgatcccatctatgatttgatacctttatacttggatatattcagaggtgattcctacctccttaagcaatttctagatagttataaacttcctttaataagacaagcatcacctcatgagtatattgagggtggcgacaagtttggacgactttcctaccatgtcatgtgctactgtattctacatgaagagaatgtcctgggagcaatttttagtctctgggacgaactcaagatggcaaaatcatgggaagaagttgaaaaggtcgtatggggcgagctaaataactacaaaggctttcctggatcatccacatctctctctttgttggagccgataactccctcaacattgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
APH Cupin_8 F-box F-box-like JmjC

Protein Analysis

946

Amino Acids

107.94

Weight (kDa)

5.28

Isoelectric Point (pI)

42.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000630)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78280
fragaria_vesca FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800
malus_domestica MD08G1186800.v1.1 MD15G1372700.v1.1
prunus_persica Prupe.1G521300_v2.0.a1 Prupe.1G521300_v2.0.a1
pyrus_communis pycom08g16060 pycom15g33370
rosa_chinensis RchiOBHm_Chr2g0139391 RchiOBHm_Chr7g0242931 RchiOBHm_Chr7g0242951 RchiOBHm_Chr7g0243001 RchiOBHm_Chr7g0243011 RchiOBHm_Chr7g0243141 RchiOBHm_Chr7g0243151 RchiOBHm_Chr7g0243351
rosa_laevigata RLG00000000853 RLG00000000857 RLG00000000858 RLG00000000863 RLG00000000867
rosa_multiflora Rmu_co8457323.1_g000001 Rmu_sc0000083.1_g000017 Rmu_sc0000679.1_g000021 Rmu_sc0001036.1_g000029 Rmu_sc0001036.1_g000032 Rmu_sc0001176.1_g000015 Rmu_sc0001461.1_g000002 Rmu_sc0001461.1_g000003 Rmu_sc0001461.1_g000056 Rmu_sc0001461.1_g000057 Rmu_sc0001461.1_g000098 Rmu_sc0001461.1_g000105 Rmu_sc0004165.1_g000084 Rmu_sc0006141.1_g000004 Rmu_sc0033806.1_g000001
rosa_roxburghii Rroxscaffold_3G00222160 Rroxscaffold_3G00222220 Rroxscaffold_4G00316290
rosa_rugosa Rorug07G0318400 Rorug07G0318400 Rorug07G0318600
rosa_samantha Rh4CG066500 Rh5DG444300 Rh7AG473700 Rh7AG473900 Rh7AG474000 Rh7AG474600 Rh7AG474800 Rh7BG444500 Rh7BG444700 Rh7CG490700 Rh7CG490800 Rh7CG491000 Rh7DG458900 Rh7DG459000 Rh7DG459300
rosa_wichuraiana Rw7G038970 Rw7G039050 Rw7G039420 Rw7G039480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2568
AasI GACNNNNNNGTC 1 cut(s) 926
Acc65I GGTACC 1 cut(s) 883
AccB1I GGYRCC 3 cut(s) 883, 1144, 2442
AccB7I CCANNNNNTGG 1 cut(s) 828
AccBSI CCGCTC 1 cut(s) 220
AccII CGCG 1 cut(s) 120
AccIII TCCGGA 1 cut(s) 1795
AciI CCGC 2 cut(s) 218, 2061
AclWI GGATC 7 cut(s) 626, 639, 803, 1715, 2171, 2480, 2797
AcoI YGGCCR 3 cut(s) 29, 44, 1916
AcsI RAATTY 4 cut(s) 1108, 1124, 1363, 1560
AcyI GRCGYC 1 cut(s) 51
AfiI CCNNNNNNNGG 3 cut(s) 828, 1021, 1751
AflII CTTAAG 1 cut(s) 2546
AflIII ACRYGT 2 cut(s) 904, 2247
AgeI ACCGGT 1 cut(s) 457
AhlI ACTAGT 1 cut(s) 1328
AloI GAACNNNNNNTCC 2 cut(s) 1988, 2020
Alw21I GWGCWC 5 cut(s) 87, 569, 1013, 1342, 1421
Alw26I GTCTC 7 cut(s) 1022, 1488, 1523, 1652, 1876, 2155, 2705
Alw44I GTGCAC 1 cut(s) 1009
AlwI GGATC 7 cut(s) 626, 639, 803, 1715, 2171, 2480, 2797
AlwNI CAGNNNCTG 1 cut(s) 828
Ama87I CYCGRG 1 cut(s) 1634
Aor13HI TCCGGA 1 cut(s) 1795
AoxI GGCC 6 cut(s) 29, 44, 488, 861, 1916, 2383
ApaLI GTGCAC 1 cut(s) 1009
ApeKI GCWGC 2 cut(s) 253, 2020
ApoI RAATTY 4 cut(s) 1108, 1124, 1363, 1560
AsiGI ACCGGT 1 cut(s) 457
Asp700I GAANNNNTTC 1 cut(s) 2076
Asp718I GGTACC 1 cut(s) 883
AspA2I CCTAGG 1 cut(s) 1651
AspS9I GGNCC 3 cut(s) 215, 776, 861
AsuC2I CCSGG 1 cut(s) 1023
AsuHPI GGTGA 5 cut(s) 935, 2429, 2495, 2543, 2586
AsuNHI GCTAGC 1 cut(s) 1532
AvaI CYCGRG 1 cut(s) 1634
AvaII GGWCC 2 cut(s) 215, 776
AvrII CCTAGG 1 cut(s) 1651
BaeGI GKGCMC 2 cut(s) 1013, 2447
BalI TGGCCA 1 cut(s) 1918
BamHI GGATCC 1 cut(s) 631
BanI GGYRCC 3 cut(s) 883, 1144, 2442
BanII GRGCYC 2 cut(s) 87, 1421
BbsI GAAGAC 3 cut(s) 251, 924, 999
Bbv12I GWGCWC 5 cut(s) 87, 569, 1013, 1342, 1421
BbvI GCAGC 2 cut(s) 240, 2032
BceAI ACGGC 2 cut(s) 80, 1158
BcgI CGANNNNNNTGC 2 cut(s) 1615, 1649
BciVI GTATCC 2 cut(s) 879, 2292
BcnI CCSGG 1 cut(s) 1023
BcoDI GTCTC 7 cut(s) 1022, 1488, 1523, 1652, 1876, 2155, 2705
BcuI ACTAGT 1 cut(s) 1328
BfmI CTRYAG 3 cut(s) 888, 1642, 2478
BfrI CTTAAG 1 cut(s) 2546
BfuI GTATCC 2 cut(s) 879, 2292
BglI GCCNNNNNGGC 1 cut(s) 496
BisI GCNGC 2 cut(s) 254, 2021
BlnI CCTAGG 1 cut(s) 1651
BlsI GCNGC 2 cut(s) 255, 2022
BmcAI AGTACT 1 cut(s) 1318
Bme18I GGWCC 2 cut(s) 215, 776
BmeT110I CYCGRG 1 cut(s) 1634
BmgT120I GGNCC 3 cut(s) 215, 776, 861
BmiI GGNNCC 7 cut(s) 633, 778, 885, 1146, 2401, 2444, 2817
BmsI GCATC 5 cut(s) 242, 472, 1764, 1928, 2600
BmtI GCTAGC 1 cut(s) 1536
BpiI GAAGAC 3 cut(s) 251, 924, 999
BplI GAGNNNNNCTC 6 cut(s) 95, 127, 1503, 1535, 2007, 2039
BpmI CTGGAG 3 cut(s) 206, 858, 1323
Bpu10I CCTNAGC 2 cut(s) 1341, 1420
BpuEI CTTGAG 2 cut(s) 2137, 2699
BpuMI CCSGG 1 cut(s) 1023
BsaAI YACGTR 1 cut(s) 572
BsaBI GATNNNNATC 2 cut(s) 630, 972
BsaHI GRCGYC 1 cut(s) 51
BsaI GGTCTC 1 cut(s) 1876
BsaJI CCNNGG 8 cut(s) 55, 1022, 1412, 1551, 1651, 1745, 2011, 2683
BsaWI WCCGGW 2 cut(s) 457, 1795
BsaXI ACNNNNNCTCC 2 cut(s) 254, 284
Bsc4I CCNNNNNNNGG 3 cut(s) 828, 1021, 1751
Bse118I RCCGGY 2 cut(s) 42, 457
Bse1I ACTGG 5 cut(s) 223, 475, 822, 1610, 2386
Bse3DI GCAATG 1 cut(s) 175
Bse8I GATNNNNATC 2 cut(s) 630, 972
BseAI TCCGGA 1 cut(s) 1795
BseDI CCNNGG 8 cut(s) 55, 1022, 1412, 1551, 1651, 1745, 2011, 2683
BseGI GGATG 9 cut(s) 376, 1055, 1390, 1756, 2152, 2217, 2263, 2323, 2792
BseJI GATNNNNATC 2 cut(s) 630, 972
BseLI CCNNNNNNNGG 3 cut(s) 828, 1021, 1751
BseMI GCAATG 1 cut(s) 175
BseMII CTCAG 4 cut(s) 296, 1272, 1355, 1434
BseNI ACTGG 5 cut(s) 223, 475, 822, 1610, 2386
BseRI GAGGAG 1 cut(s) 105
BseSI GKGCMC 2 cut(s) 1013, 2447
BseX3I CGGCCG 1 cut(s) 44
BseXI GCAGC 2 cut(s) 240, 2032
BseYI CCCAGC 1 cut(s) 1865
BsgI GTGCAG 1 cut(s) 2445
Bsh1236I CGCG 1 cut(s) 120
Bsh1285I CGRYCG 1 cut(s) 47
BshFI GGCC 6 cut(s) 31, 46, 490, 863, 1918, 2385
BshNI GGYRCC 3 cut(s) 883, 1144, 2442
BshTI ACCGGT 1 cut(s) 457
BsiEI CGRYCG 1 cut(s) 47
BsiHKAI GWGCWC 5 cut(s) 87, 569, 1013, 1342, 1421
BsiHKCI CYCGRG 1 cut(s) 1634
BsiSI CCGG 6 cut(s) 28, 43, 47, 458, 1022, 1796
BslFI GGGAC 2 cut(s) 762, 2720
BslI CCNNNNNNNGG 3 cut(s) 828, 1021, 1751
BsmAI GTCTC 7 cut(s) 1022, 1488, 1523, 1652, 1876, 2155, 2705
BsmBI CGTCTC 1 cut(s) 1022
BsmFI GGGAC 2 cut(s) 762, 2720
BsnI GGCC 6 cut(s) 31, 46, 490, 863, 1918, 2385
Bso31I GGTCTC 1 cut(s) 1876
BsoBI CYCGRG 1 cut(s) 1634
Bsp1286I GDGCHC 6 cut(s) 87, 569, 1013, 1342, 1421, 2447
Bsp13I TCCGGA 1 cut(s) 1795
Bsp1407I TGTACA 2 cut(s) 336, 2244
Bsp68I TCGCGA 1 cut(s) 120
BspACI CCGC 2 cut(s) 218, 2061
BspANI GGCC 6 cut(s) 31, 46, 490, 863, 1918, 2385
BspCNI CTCAG 4 cut(s) 297, 1271, 1354, 1433
BspEI TCCGGA 1 cut(s) 1795
BspFNI CGCG 1 cut(s) 120
BspHI TCATGA 1 cut(s) 2599
BspLI GGNNCC 7 cut(s) 633, 778, 885, 1146, 2401, 2444, 2817
BspOI GCTAGC 1 cut(s) 1536
BspPI GGATC 7 cut(s) 626, 639, 803, 1715, 2171, 2480, 2797
BspQI GCTCTTC 1 cut(s) 168
BspT107I GGYRCC 3 cut(s) 883, 1144, 2442
BspTI CTTAAG 1 cut(s) 2546
BspTNI GGTCTC 1 cut(s) 1876
BsrBI CCGCTC 1 cut(s) 220
BsrDI GCAATG 1 cut(s) 175
BsrFI RCCGGY 2 cut(s) 42, 457
BsrGI TGTACA 2 cut(s) 336, 2244
BsrI ACTGG 5 cut(s) 223, 475, 822, 1610, 2386
BssAI RCCGGY 2 cut(s) 42, 457
BssECI CCNNGG 8 cut(s) 55, 1022, 1412, 1551, 1651, 1745, 2011, 2683
BssNI GRCGYC 1 cut(s) 51
BssT1I CCWWGG 3 cut(s) 1412, 1651, 1745
Bst4CI ACNGT 9 cut(s) 250, 695, 901, 923, 1061, 1646, 1975, 2423, 2660
Bst6I CTCTTC 4 cut(s) 168, 420, 1383, 2667
BstACI GRCGYC 1 cut(s) 51
BstAFI CTTAAG 1 cut(s) 2546
BstAPI GCANNNNNTGC 2 cut(s) 491, 1529
BstAUI TGTACA 2 cut(s) 336, 2244
BstBAI YACGTR 1 cut(s) 572
BstC8I GCNNGC 6 cut(s) 44, 130, 292, 492, 1534, 2762
BstDEI CTNAG 7 cut(s) 305, 1113, 1258, 1341, 1369, 1420, 1999
BstEII GGTNACC 1 cut(s) 2417
BstF5I GGATG 9 cut(s) 376, 1055, 1390, 1756, 2152, 2217, 2263, 2323, 2792
BstFNI CGCG 1 cut(s) 120
BstMAI GTCTC 7 cut(s) 1022, 1488, 1523, 1652, 1876, 2155, 2705
BstMCI CGRYCG 1 cut(s) 47
BstMWI GCNNNNNNNGC 8 cut(s) 138, 491, 496, 961, 1520, 1529, 1623, 2364
BstNSI RCATGY 4 cut(s) 806, 908, 1518, 2251
BstPI GGTNACC 1 cut(s) 2417
BstSFI CTRYAG 3 cut(s) 888, 1642, 2478
BstSLI GKGCMC 2 cut(s) 1013, 2447
BstUI CGCG 1 cut(s) 120
BstV1I GCAGC 2 cut(s) 240, 2032
BstV2I GAAGAC 3 cut(s) 251, 924, 999
BstX2I RGATCY 2 cut(s) 631, 2176
BstXI CCANNNNNNTGG 4 cut(s) 762, 788, 1050, 1381
BstYI RGATCY 2 cut(s) 631, 2176
BstZI CGGCCG 1 cut(s) 44
BsuI GTATCC 2 cut(s) 879, 2292
BsuRI GGCC 6 cut(s) 31, 46, 490, 863, 1918, 2385
BtsCI GGATG 9 cut(s) 376, 1055, 1390, 1756, 2152, 2217, 2263, 2323, 2792
BtsI GCAGTG 2 cut(s) 154, 962
BtsIMutI CAGTG 9 cut(s) 154, 206, 302, 468, 700, 829, 962, 1057, 2379
BtuMI TCGCGA 1 cut(s) 120
Cac8I GCNNGC 6 cut(s) 44, 130, 292, 492, 1534, 2762
CaiI CAGNNNCTG 1 cut(s) 828
CciI TCATGA 1 cut(s) 2599
Cfr10I RCCGGY 2 cut(s) 42, 457
Cfr13I GGNCC 3 cut(s) 215, 776, 861
CseI GACGC 1 cut(s) 59
CsiI ACCWGGT 1 cut(s) 1147
CspAI ACCGGT 1 cut(s) 457
CspCI CAANNNNNGTGG 2 cut(s) 168, 203
DdeI CTNAG 7 cut(s) 305, 1113, 1258, 1341, 1369, 1420, 1999
DrdI GACNNNNNNGTC 1 cut(s) 926
DseDI GACNNNNNNGTC 1 cut(s) 926
EaeI YGGCCR 3 cut(s) 29, 44, 1916
EagI CGGCCG 1 cut(s) 44
Eam1104I CTCTTC 4 cut(s) 168, 420, 1383, 2667
EarI CTCTTC 4 cut(s) 168, 420, 1383, 2667
Ecl136II GAGCTC 2 cut(s) 85, 1419
EclXI CGGCCG 1 cut(s) 44
Eco130I CCWWGG 3 cut(s) 1412, 1651, 1745
Eco24I GRGCYC 2 cut(s) 87, 1421
Eco31I GGTCTC 1 cut(s) 1876
Eco32I GATATC 1 cut(s) 2311
Eco47I GGWCC 2 cut(s) 215, 776
Eco52I CGGCCG 1 cut(s) 44
Eco53kI GAGCTC 2 cut(s) 85, 1419
Eco88I CYCGRG 1 cut(s) 1634
Eco91I GGTNACC 1 cut(s) 2417
EcoICRI GAGCTC 2 cut(s) 85, 1419
EcoO65I GGTNACC 1 cut(s) 2417
EcoRI GAATTC 1 cut(s) 1108
EcoRV GATATC 1 cut(s) 2311
EcoT14I CCWWGG 3 cut(s) 1412, 1651, 1745
EcoT22I ATGCAT 1 cut(s) 487
EcoT38I GRGCYC 2 cut(s) 87, 1421
ErhI CCWWGG 3 cut(s) 1412, 1651, 1745
Esp3I CGTCTC 1 cut(s) 1022
FaqI GGGAC 2 cut(s) 762, 2720
Fnu4HI GCNGC 2 cut(s) 254, 2021
FokI GGATG 9 cut(s) 383, 1062, 1397, 1763, 2159, 2204, 2270, 2330, 2779
FriOI GRGCYC 2 cut(s) 87, 1421
Fsp4HI GCNGC 2 cut(s) 254, 2021
GluI GCNGC 2 cut(s) 254, 2021
GsaI CCCAGC 1 cut(s) 1869
GsuI CTGGAG 3 cut(s) 206, 858, 1323
HaeIII GGCC 6 cut(s) 31, 46, 490, 863, 1918, 2385
HapII CCGG 6 cut(s) 28, 43, 47, 458, 1022, 1796
HgaI GACGC 1 cut(s) 59
Hin1I GRCGYC 1 cut(s) 51
HincII GTYRAC 3 cut(s) 189, 1663, 2209
HindII GTYRAC 3 cut(s) 189, 1663, 2209
HindIII AAGCTT 1 cut(s) 1466
HinfI GANTC 7 cut(s) 323, 1214, 1284, 1547, 1883, 2039, 2534
HpaII CCGG 6 cut(s) 28, 43, 47, 458, 1022, 1796
HphI GGTGA 5 cut(s) 935, 2429, 2495, 2543, 2586
Hpy166II GTNNAC 6 cut(s) 189, 698, 910, 1011, 1663, 2209
Hpy8I GTNNAC 6 cut(s) 189, 698, 910, 1011, 1663, 2209
Hpy99I CGWCG 2 cut(s) 83, 125
HpyCH4III ACNGT 9 cut(s) 250, 695, 901, 923, 1061, 1646, 1975, 2423, 2660
HpyCH4IV ACGT 4 cut(s) 123, 280, 571, 1692
HpyF10VI GCNNNNNNNGC 8 cut(s) 138, 491, 496, 961, 1520, 1529, 1623, 2364
HpyF3I CTNAG 7 cut(s) 305, 1113, 1258, 1341, 1369, 1420, 1999
HpySE526I ACGT 4 cut(s) 123, 280, 571, 1692
Hsp92I GRCGYC 1 cut(s) 51
Kpn2I TCCGGA 1 cut(s) 1795
KpnI GGTACC 1 cut(s) 887
KroI GCCGGC 1 cut(s) 42
KroNI GCCGGC 1 cut(s) 44
LguI GCTCTTC 1 cut(s) 168
LmnI GCTCC 6 cut(s) 225, 1416, 1511, 2028, 2687, 2815
Lsp1109I GCAGC 2 cut(s) 240, 2032
LweI GCATC 5 cut(s) 242, 472, 1764, 1928, 2600
MabI ACCWGGT 1 cut(s) 1147
MaeII ACGT 4 cut(s) 123, 280, 571, 1692
MaeIII GTNAC 6 cut(s) 281, 895, 1090, 1157, 1977, 2417
MbiI CCGCTC 1 cut(s) 220
MfeI CAATTG 1 cut(s) 1426
MflI RGATCY 2 cut(s) 631, 2176
MhlI GDGCHC 6 cut(s) 87, 569, 1013, 1342, 1421, 2447
MlsI TGGCCA 1 cut(s) 1918
MluNI TGGCCA 1 cut(s) 1918
MlyI GAGTC 2 cut(s) 317, 1293
MmeI TCCRAC 5 cut(s) 102, 968, 1456, 1613, 2793
Mox20I TGGCCA 1 cut(s) 1918
Mph1103I ATGCAT 1 cut(s) 487
MroI TCCGGA 1 cut(s) 1795
MroNI GCCGGC 1 cut(s) 42
MroXI GAANNNNTTC 1 cut(s) 2076
MscI TGGCCA 1 cut(s) 1918
MseI TTAA 6 cut(s) 1964, 2090, 2166, 2349, 2547, 2579
MslI CAYNNNNRTG 4 cut(s) 760, 841, 1016, 2330
Msp20I TGGCCA 1 cut(s) 1918
MspA1I CMGCKG 2 cut(s) 1898, 2061
MspCI CTTAAG 1 cut(s) 2546
MspI CCGG 6 cut(s) 28, 43, 47, 458, 1022, 1796
MunI CAATTG 1 cut(s) 1426
MvnI CGCG 1 cut(s) 120
MwoI GCNNNNNNNGC 8 cut(s) 138, 491, 496, 961, 1520, 1529, 1623, 2364
NaeI GCCGGC 1 cut(s) 44
NciI CCSGG 1 cut(s) 1023
NgoMIV GCCGGC 1 cut(s) 42
NheI GCTAGC 1 cut(s) 1532
NlaIV GGNNCC 7 cut(s) 633, 778, 885, 1146, 2401, 2444, 2817
NmuCI GTSAC 5 cut(s) 281, 895, 1157, 1977, 2417
NruI TCGCGA 1 cut(s) 120
NsiI ATGCAT 1 cut(s) 487
NspI RCATGY 4 cut(s) 806, 908, 1518, 2251
PaeR7I CTCGAG 1 cut(s) 1634
PagI TCATGA 1 cut(s) 2599
PciI ACATGT 2 cut(s) 904, 2247
PciSI GCTCTTC 1 cut(s) 168
PcsI WCGNNNNNNNCGW 1 cut(s) 2757
PdiI GCCGGC 1 cut(s) 44
PdmI GAANNNNTTC 1 cut(s) 2076
PfeI GAWTC 5 cut(s) 1214, 1547, 1883, 2039, 2534
PflMI CCANNNNNTGG 1 cut(s) 828
PfoI TCCNGGA 2 cut(s) 874, 2785
PinAI ACCGGT 1 cut(s) 457
PkrI GCNGC 2 cut(s) 255, 2022
PleI GAGTC 2 cut(s) 317, 1292
PpsI GAGTC 2 cut(s) 317, 1292
Ppu21I YACGTR 1 cut(s) 572
PscI ACATGT 2 cut(s) 904, 2247
PsiI TTATAA 1 cut(s) 2568
Psp124BI GAGCTC 2 cut(s) 87, 1421
PspEI GGTNACC 1 cut(s) 2417
PspFI CCCAGC 1 cut(s) 1865
PspN4I GGNNCC 7 cut(s) 633, 778, 885, 1146, 2401, 2444, 2817
PspPI GGNCC 3 cut(s) 215, 776, 861
PsrI GAACNNNNNNTAC 2 cut(s) 2275, 2307
PstNI CAGNNNCTG 1 cut(s) 828
PsuI RGATCY 2 cut(s) 631, 2176
PvuII CAGCTG 1 cut(s) 1898
RruI TCGCGA 1 cut(s) 120
RseI CAYNNNNRTG 4 cut(s) 760, 841, 1016, 2330
SacI GAGCTC 2 cut(s) 87, 1421
SapI GCTCTTC 1 cut(s) 168
SaqAI TTAA 6 cut(s) 1964, 2090, 2166, 2349, 2547, 2579
SatI GCNGC 2 cut(s) 254, 2021
Sau96I GGNCC 3 cut(s) 215, 776, 861
ScaI AGTACT 1 cut(s) 1318
SchI GAGTC 2 cut(s) 317, 1293
SduI GDGCHC 6 cut(s) 87, 569, 1013, 1342, 1421, 2447
SexAI ACCWGGT 1 cut(s) 1147
SfaNI GCATC 5 cut(s) 242, 472, 1764, 1928, 2600
SfcI CTRYAG 3 cut(s) 888, 1642, 2478
Sfr274I CTCGAG 1 cut(s) 1634
SinI GGWCC 2 cut(s) 215, 776
SlaI CTCGAG 1 cut(s) 1634
SmiMI CAYNNNNRTG 4 cut(s) 760, 841, 1016, 2330
SmlI CTYRAG 4 cut(s) 1634, 2152, 2546, 2714
SmoI CTYRAG 4 cut(s) 1634, 2152, 2546, 2714
SpeI ACTAGT 1 cut(s) 1328
SsiI CCGC 2 cut(s) 218, 2061
SspI AATATT 1 cut(s) 934
SstI GAGCTC 2 cut(s) 87, 1421
StyI CCWWGG 3 cut(s) 1412, 1651, 1745
TaaI ACNGT 9 cut(s) 250, 695, 901, 923, 1061, 1646, 1975, 2423, 2660
TaiI ACGT 4 cut(s) 126, 283, 574, 1695
TaqI TCGA 2 cut(s) 648, 1635
TatI WGTACW 6 cut(s) 225, 336, 901, 1316, 2214, 2244
TfiI GAWTC 5 cut(s) 1214, 1547, 1883, 2039, 2534
Tru1I TTAA 6 cut(s) 1964, 2090, 2166, 2349, 2547, 2579
Tru9I TTAA 6 cut(s) 1964, 2090, 2166, 2349, 2547, 2579
TscAI CASTG 9 cut(s) 154, 213, 309, 475, 700, 829, 962, 1064, 2386
TseFI GTSAC 5 cut(s) 281, 895, 1157, 1977, 2417
TseI GCWGC 2 cut(s) 253, 2020
Tsp45I GTSAC 5 cut(s) 281, 895, 1157, 1977, 2417
TspRI CASTG 9 cut(s) 154, 213, 309, 475, 700, 829, 962, 1064, 2386
Van91I CCANNNNNTGG 1 cut(s) 828
Vha464I CTTAAG 1 cut(s) 2546
VneI GTGCAC 1 cut(s) 1009
VpaK11BI GGWCC 2 cut(s) 215, 776
XapI RAATTY 4 cut(s) 1108, 1124, 1363, 1560
XbaI TCTAGA 1 cut(s) 2557
XceI RCATGY 4 cut(s) 806, 908, 1518, 2251
XcmI CCANNNNNNNNNTGG 2 cut(s) 1050, 2065
XhoI CTCGAG 1 cut(s) 1634
XmaJI CCTAGG 1 cut(s) 1651
XmnI GAANNNNTTC 1 cut(s) 2076
ZrmI AGTACT 1 cut(s) 1318
Zsp2I ATGCAT 1 cut(s) 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.