RchiOBHm_Chr7g0243141

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000630
Physical Location & Seq
Reverse (-)
69452623 .. 69458299
5677 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21790

Sequence Viewer

Length: 2124 bp
ATGTGGTCGTGGGCCTTGTATCCTCCAGGAAGAGTACCTATAGGTGTCACAGTACATGTAAACGAAGAAGACGGTGATGTCAATATTGAAACTCCAACTTCGTTGCAGTGGTGGCTAGATTTTTATCCACTTCTTGCTGATGAAGACAAGCCCATAGAGTGCACCCAAATGCCGGGGGAGACAATTTTCGTTCCTAGTGGATGGTGGCACTGTGTCCTAAATCTTGAACCATCTATTGCTGTTACCCAGAACTTTGTAAATTCTAAGAACTTTGAATTTGTGTGCTTGGATATGGCACCTGGTTATCGTCATAAGGGAGTTTGCCGTGCTGGATTACTTGCAGATGATGAAGGCAGTATTGAGGATTCCACAAATCATATACTCTATGATAAAGATGATTATAATTCCTCAGATATGACTAGGAAAGTAAAAAGAGTCAGAACTCTCAAACCTGGAGAATATCCAAGTAGTGAAAGAACTAGTAATGGCGCTCAGGCTTTTTCTTATGATGTAAATTTCCTAGCCATGTATCTGGATGAAGAGAGAGATCATTACAACTCTCCTTGGAGCTCAGGCAATTGCATAGGGCAACGAGAAATGAGAGAATGGTTATTCAAGCTTTGGGTTGGAAAACCAGGAATGAGAGACTTAATCTGGAAGGGAGCATGTCTTGCACTAAATGCGAGCAAATGGTCAGAATCCCTGGCAGAAATTTGTGCCTTCCACAAATTGCCTTCTCCAACAGATGATGAGAGGCTTCCTGTTGGCACGGGTAGCAATCCTGTTTATCTCATGAGCAACTGTGTAATCAAAATTTTTGTTGACGGAGGACTGGAAACGTCACTTTATGGATTAGGTGCTGAGCTTGAGTTCTACAGTCTCCTAGGCAAAGTCAAATCCCCTCTGAAAAATCACATACCTGACATTTTGGCAAGTGGGATCATTTATCTTGAAAATGGAACTTATAAAATTGTACCTTGGGATGGCAACGGAGTTCCTGATGTGATTGCTAAGTGCAATTTTATTCCGGAGAAGGTCAAAGGAGATGTTTCTCCTTTTGGTGTATGGAGGAAGAAACAATTTGAATACAGAAAAGCTGGGGTCTCAACAAACGAATCCATCAGTTCAGTTGAATATACAAGGATATGGCCATATCTCATAACAAAACGATGCAGAGGAAAAATATATGCAGAGTTAAGAGATACTGTGTCACGGGAAGATGAATTGAACTTAGCTTCCTTCCTGGGAGAGCAGCTCTGTAACCTCCATCTCTTGCCCCATCCACCTCTTAATATCTCAACTTTCTCAGATATTGAACAGGAATCAGATTTTCCCTTCACCCGCGGTAGTATAGAAGCTGTTCCCAATAAATCAAACATTCCTGCTGAATGGGATATATTCATTAGAACTCTATCCAAGAAGAAGAAGGATGTCTCAAGTCGCTTGGTTAAATGGGGAGATCCAATTCCTAGTACACTCATAGAGAAAGTTGACAAATACATCCCAGATGATTTTGCCAAGTTTCTGTACATATTCAAGGATGAAAATGGTGTAAGCAATGTTGGTAAAAGTTGTTCGTGGATACACTCTGATATCATGGATGACAACATTCACATGGAACTATGTGGTTTTAATTCTTGTGTCATTGGCAATGCCAAAAACACTTGCCTGGTAAAGAATGGTTCCTTGAATGTTGATGGTGACCGTGCAGAGAGGAGAACATGGTGCCCTAGCCACATTCTTGATTTCAGTAATCTTTCTATAGGTGATCCCATCTATGATTTGATACCCTTATACTTGGATATATTCAGAGGAGATTGCTGCCTGCTTAAGGGATTTTTAGATAGTTATAAACTTCCTTTAGTGAGACAAGCATCACCTCATGAGTATATTGAGGGTGGCGACAAGTTTGGACGACTTTCATACCAGGCCATGTGCTACTGTATTCTACATGAAGAGAATGTCCTGGGAGCAATTTTTAGTCTCTGGGACGAACTCAAGATGGCAAAATCATGGGAAGAAGTTGAACAGGTCGTATGGGGCGAGCTAAACAACTACAAAGGCTTTCCTGGATCATCCACATCTCTCTCTTTGTTGGAGCCGAAAACTCCCTCAACATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
APH Cupin_8 F-box F-box-like JmjC

Protein Analysis

707

Amino Acids

79.98

Weight (kDa)

5.15

Isoelectric Point (pI)

40.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cupin_8 PF13621 36 - 88 3.4e-07 Cupin-like domain
JmjC PF02373 48 - 85 3.2e-08 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000630)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78280
fragaria_vesca FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800
malus_domestica MD08G1186800.v1.1 MD15G1372700.v1.1
prunus_persica Prupe.1G521300_v2.0.a1 Prupe.1G521300_v2.0.a1
pyrus_communis pycom08g16060 pycom15g33370
rosa_chinensis RchiOBHm_Chr2g0139391 RchiOBHm_Chr7g0242931 RchiOBHm_Chr7g0242951 RchiOBHm_Chr7g0243001 RchiOBHm_Chr7g0243011 RchiOBHm_Chr7g0243141 RchiOBHm_Chr7g0243151 RchiOBHm_Chr7g0243351
rosa_laevigata RLG00000000853 RLG00000000857 RLG00000000858 RLG00000000863 RLG00000000867
rosa_multiflora Rmu_co8457323.1_g000001 Rmu_sc0000083.1_g000017 Rmu_sc0000679.1_g000021 Rmu_sc0001036.1_g000029 Rmu_sc0001036.1_g000032 Rmu_sc0001176.1_g000015 Rmu_sc0001461.1_g000002 Rmu_sc0001461.1_g000003 Rmu_sc0001461.1_g000056 Rmu_sc0001461.1_g000057 Rmu_sc0001461.1_g000098 Rmu_sc0001461.1_g000105 Rmu_sc0004165.1_g000084 Rmu_sc0006141.1_g000004 Rmu_sc0033806.1_g000001
rosa_roxburghii Rroxscaffold_3G00222160 Rroxscaffold_3G00222220 Rroxscaffold_4G00316290
rosa_rugosa Rorug07G0318400 Rorug07G0318400 Rorug07G0318600
rosa_samantha Rh4CG066500 Rh5DG444300 Rh7AG473700 Rh7AG473900 Rh7AG474000 Rh7AG474600 Rh7AG474800 Rh7BG444500 Rh7BG444700 Rh7CG490700 Rh7CG490800 Rh7CG491000 Rh7DG458900 Rh7DG459000 Rh7DG459300
rosa_wichuraiana Rw7G038970 Rw7G039050 Rw7G039420 Rw7G039480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 402, 966, 1851, 2122
AasI GACNNNNNNGTC 1 cut(s) 77
AccB1I GGYRCC 2 cut(s) 295, 1725
AccII CGCG 1 cut(s) 1344
AccIII TCCGGA 1 cut(s) 1027
AciI CCGC 2 cut(s) 1342, 1344
AclWI GGATC 4 cut(s) 947, 1454, 1763, 2080
AcoI YGGCCR 1 cut(s) 1148
AcsI RAATTY 5 cut(s) 259, 275, 514, 711, 813
AfaI GTAC 5 cut(s) 36, 54, 975, 1474, 1529
AfiI CCNNNNNNNGG 3 cut(s) 172, 983, 1831
AflII CTTAAG 1 cut(s) 1829
AflIII ACRYGT 1 cut(s) 55
AhlI ACTAGT 1 cut(s) 479
AloI GAACNNNNNNTCC 2 cut(s) 1220, 1252
AluBI AGCT 8 cut(s) 570, 619, 865, 1097, 1235, 1255, 1358, 2047
AluI AGCT 8 cut(s) 570, 619, 865, 1097, 1235, 1255, 1358, 2047
Alw21I GWGCWC 2 cut(s) 164, 572
Alw26I GTCTC 7 cut(s) 173, 639, 884, 1108, 1438, 1861, 1988
Alw44I GTGCAC 1 cut(s) 160
AlwI GGATC 4 cut(s) 947, 1454, 1763, 2080
Aor13HI TCCGGA 1 cut(s) 1027
AoxI GGCC 3 cut(s) 12, 1148, 1929
ApaLI GTGCAC 1 cut(s) 160
ApeKI GCWGC 2 cut(s) 1252, 1821
ApoI RAATTY 5 cut(s) 259, 275, 514, 711, 813
Asp700I GAANNNNTTC 1 cut(s) 1359
AspA2I CCTAGG 1 cut(s) 883
AspLEI GCGC 1 cut(s) 491
AspS9I GGNCC 1 cut(s) 12
AsuC2I CCSGG 1 cut(s) 174
AsuHPI GGTGA 5 cut(s) 86, 1330, 1712, 1778, 1869
AvrII CCTAGG 1 cut(s) 883
BaeGI GKGCMC 2 cut(s) 164, 1730
BalI TGGCCA 1 cut(s) 1150
BanI GGYRCC 2 cut(s) 295, 1725
BanII GRGCYC 1 cut(s) 572
BbsI GAAGAC 2 cut(s) 75, 150
Bbv12I GWGCWC 2 cut(s) 164, 572
BbvI GCAGC 2 cut(s) 1264, 1808
BccI CCATC 9 cut(s) 195, 238, 977, 1127, 1275, 1287, 1691, 1781, 1996
BceAI ACGGC 1 cut(s) 309
BciVI GTATCC 2 cut(s) 30, 1575
BcnI CCSGG 1 cut(s) 174
BcoDI GTCTC 7 cut(s) 173, 639, 884, 1108, 1438, 1861, 1988
BcuI ACTAGT 1 cut(s) 479
BfaI CTAG 8 cut(s) 116, 195, 420, 480, 521, 884, 1470, 1731
BfmI CTRYAG 3 cut(s) 39, 874, 1761
BfoI RGCGCY 1 cut(s) 492
BfrI CTTAAG 1 cut(s) 1829
BfuI GTATCC 2 cut(s) 30, 1575
BisI GCNGC 2 cut(s) 1253, 1822
BlnI CCTAGG 1 cut(s) 883
BlpI GCTNAGC 1 cut(s) 861
BlsI GCNGC 2 cut(s) 1254, 1823
BmgT120I GGNCC 1 cut(s) 12
BmiI GGNNCC 4 cut(s) 297, 1684, 1727, 2100
BmsI GCATC 2 cut(s) 1160, 1883
BpiI GAAGAC 2 cut(s) 75, 150
BplI GAGNNNNNCTC 2 cut(s) 1239, 1271
BpmI CTGGAG 2 cut(s) 9, 474
Bpu10I CCTNAGC 2 cut(s) 492, 571
Bpu1102I GCTNAGC 1 cut(s) 861
BpuEI CTTGAG 3 cut(s) 887, 1420, 1982
BpuMI CCSGG 1 cut(s) 174
BsaBI GATNNNNATC 1 cut(s) 123
BsaI GGTCTC 1 cut(s) 1108
BsaJI CCNNGG 8 cut(s) 173, 563, 702, 883, 977, 1243, 1342, 1966
BsaWI WCCGGW 1 cut(s) 1027
Bsc4I CCNNNNNNNGG 3 cut(s) 172, 983, 1831
Bse1I ACTGG 1 cut(s) 837
Bse3DI GCAATG 2 cut(s) 1564, 1657
Bse8I GATNNNNATC 1 cut(s) 123
BseAI TCCGGA 1 cut(s) 1027
BseDI CCNNGG 8 cut(s) 173, 563, 702, 883, 977, 1243, 1342, 1966
BseGI GGATG 9 cut(s) 206, 541, 988, 1279, 1435, 1500, 1546, 1606, 2075
BseJI GATNNNNATC 1 cut(s) 123
BseLI CCNNNNNNNGG 3 cut(s) 172, 983, 1831
BseMI GCAATG 2 cut(s) 1564, 1657
BseMII CTCAG 5 cut(s) 423, 506, 585, 852, 1320
BseNI ACTGG 1 cut(s) 837
BseRI GAGGAG 2 cut(s) 1729, 1827
BseSI GKGCMC 2 cut(s) 164, 1730
BseXI GCAGC 2 cut(s) 1264, 1808
BseYI CCCAGC 1 cut(s) 1097
BsgI GTGCAG 1 cut(s) 1728
Bsh1236I CGCG 1 cut(s) 1344
BshFI GGCC 3 cut(s) 14, 1150, 1931
BshNI GGYRCC 2 cut(s) 295, 1725
BsiHKAI GWGCWC 2 cut(s) 164, 572
BsiSI CCGG 2 cut(s) 173, 1028
BslFI GGGAC 1 cut(s) 2003
BslI CCNNNNNNNGG 3 cut(s) 172, 983, 1831
BsmAI GTCTC 7 cut(s) 173, 639, 884, 1108, 1438, 1861, 1988
BsmFI GGGAC 1 cut(s) 2003
BsnI GGCC 3 cut(s) 14, 1150, 1931
Bso31I GGTCTC 1 cut(s) 1108
Bsp1286I GDGCHC 3 cut(s) 164, 572, 1730
Bsp13I TCCGGA 1 cut(s) 1027
Bsp1407I TGTACA 1 cut(s) 1527
Bsp143I GATC 5 cut(s) 547, 939, 1459, 1768, 2072
Bsp1720I GCTNAGC 1 cut(s) 861
BspACI CCGC 2 cut(s) 1342, 1344
BspANI GGCC 3 cut(s) 14, 1150, 1931
BspCNI CTCAG 5 cut(s) 422, 505, 584, 853, 1319
BspEI TCCGGA 1 cut(s) 1027
BspFNI CGCG 1 cut(s) 1344
BspHI TCATGA 2 cut(s) 792, 1882
BspLI GGNNCC 4 cut(s) 297, 1684, 1727, 2100
BspPI GGATC 4 cut(s) 947, 1454, 1763, 2080
BspT107I GGYRCC 2 cut(s) 295, 1725
BspTI CTTAAG 1 cut(s) 1829
BspTNI GGTCTC 1 cut(s) 1108
BsrDI GCAATG 2 cut(s) 1564, 1657
BsrGI TGTACA 1 cut(s) 1527
BsrI ACTGG 1 cut(s) 837
BssECI CCNNGG 8 cut(s) 173, 563, 702, 883, 977, 1243, 1342, 1966
BssMI GATC 5 cut(s) 547, 939, 1459, 1768, 2072
BssT1I CCWWGG 3 cut(s) 563, 883, 977
Bst4CI ACNGT 8 cut(s) 52, 74, 212, 803, 878, 1207, 1706, 1943
Bst6I CTCTTC 3 cut(s) 25, 534, 1950
BstAFI CTTAAG 1 cut(s) 1829
BstAPI GCANNNNNTGC 2 cut(s) 671, 680
BstAUI TGTACA 1 cut(s) 1527
BstC8I GCNNGC 3 cut(s) 685, 1826, 2045
BstDEI CTNAG 8 cut(s) 264, 409, 492, 571, 861, 1011, 1231, 1306
BstDSI CCRYGG 1 cut(s) 1342
BstEII GGTNACC 1 cut(s) 1700
BstENI CCTNNNNNAGG 1 cut(s) 1829
BstF5I GGATG 9 cut(s) 206, 541, 988, 1279, 1435, 1500, 1546, 1606, 2075
BstFNI CGCG 1 cut(s) 1344
BstH2I RGCGCY 1 cut(s) 492
BstHHI GCGC 1 cut(s) 491
BstKTI GATC 5 cut(s) 550, 942, 1462, 1771, 2075
BstMAI GTCTC 7 cut(s) 173, 639, 884, 1108, 1438, 1861, 1988
BstMBI GATC 5 cut(s) 547, 939, 1459, 1768, 2072
BstMWI GCNNNNNNNGC 4 cut(s) 112, 671, 680, 774
BstNSI RCATGY 2 cut(s) 59, 669
BstPI GGTNACC 1 cut(s) 1700
BstSFI CTRYAG 3 cut(s) 39, 874, 1761
BstSLI GKGCMC 2 cut(s) 164, 1730
BstUI CGCG 1 cut(s) 1344
BstV1I GCAGC 2 cut(s) 1264, 1808
BstV2I GAAGAC 2 cut(s) 75, 150
BstX2I RGATCY 1 cut(s) 1459
BstXI CCANNNNNNTGG 1 cut(s) 532
BstYI RGATCY 1 cut(s) 1459
BsuI GTATCC 2 cut(s) 30, 1575
BsuRI GGCC 3 cut(s) 14, 1150, 1931
BtgI CCRYGG 1 cut(s) 1342
BtsCI GGATG 9 cut(s) 206, 541, 988, 1279, 1435, 1500, 1546, 1606, 2075
BtsI GCAGTG 1 cut(s) 113
BtsIMutI CAGTG 2 cut(s) 113, 208
Cac8I GCNNGC 3 cut(s) 685, 1826, 2045
CciI TCATGA 2 cut(s) 792, 1882
CfoI GCGC 1 cut(s) 491
Cfr13I GGNCC 1 cut(s) 12
Cfr42I CCGCGG 1 cut(s) 1345
CsiI ACCWGGT 1 cut(s) 298
Csp6I GTAC 5 cut(s) 35, 53, 974, 1473, 1528
CviQI GTAC 5 cut(s) 35, 53, 974, 1473, 1528
DdeI CTNAG 8 cut(s) 264, 409, 492, 571, 861, 1011, 1231, 1306
DpnI GATC 5 cut(s) 549, 941, 1461, 1770, 2074
DpnII GATC 5 cut(s) 547, 939, 1459, 1768, 2072
DrdI GACNNNNNNGTC 1 cut(s) 77
DseDI GACNNNNNNGTC 1 cut(s) 77
EaeI YGGCCR 1 cut(s) 1148
Eam1104I CTCTTC 3 cut(s) 25, 534, 1950
EarI CTCTTC 3 cut(s) 25, 534, 1950
Ecl136II GAGCTC 1 cut(s) 570
Eco130I CCWWGG 3 cut(s) 563, 883, 977
Eco24I GRGCYC 1 cut(s) 572
Eco31I GGTCTC 1 cut(s) 1108
Eco32I GATATC 1 cut(s) 1594
Eco53kI GAGCTC 1 cut(s) 570
Eco91I GGTNACC 1 cut(s) 1700
EcoICRI GAGCTC 1 cut(s) 570
EcoNI CCTNNNNNAGG 1 cut(s) 1829
EcoO65I GGTNACC 1 cut(s) 1700
EcoRV GATATC 1 cut(s) 1594
EcoT14I CCWWGG 3 cut(s) 563, 883, 977
EcoT38I GRGCYC 1 cut(s) 572
ErhI CCWWGG 3 cut(s) 563, 883, 977
FaqI GGGAC 1 cut(s) 2003
FauI CCCGC 1 cut(s) 1349
Fnu4HI GCNGC 2 cut(s) 1253, 1822
FokI GGATG 9 cut(s) 213, 548, 995, 1266, 1442, 1487, 1553, 1613, 2062
FriOI GRGCYC 1 cut(s) 572
Fsp4HI GCNGC 2 cut(s) 1253, 1822
FspBI CTAG 8 cut(s) 116, 195, 420, 480, 521, 884, 1470, 1731
GlaI GCGC 1 cut(s) 490
GluI GCNGC 2 cut(s) 1253, 1822
GsaI CCCAGC 1 cut(s) 1101
GsuI CTGGAG 2 cut(s) 9, 474
HaeII RGCGCY 1 cut(s) 492
HaeIII GGCC 3 cut(s) 14, 1150, 1931
HapII CCGG 2 cut(s) 173, 1028
HhaI GCGC 1 cut(s) 491
Hin6I GCGC 1 cut(s) 489
HinP1I GCGC 1 cut(s) 489
HincII GTYRAC 2 cut(s) 823, 1492
HindII GTYRAC 2 cut(s) 823, 1492
HindIII AAGCTT 1 cut(s) 617
HinfI GANTC 5 cut(s) 365, 435, 698, 1115, 1322
HpaII CCGG 2 cut(s) 173, 1028
HphI GGTGA 5 cut(s) 86, 1330, 1712, 1778, 1869
Hpy166II GTNNAC 5 cut(s) 61, 162, 823, 1475, 1492
Hpy188I TCNGA 8 cut(s) 412, 440, 697, 906, 1309, 1327, 1591, 1811
Hpy8I GTNNAC 5 cut(s) 61, 162, 823, 1475, 1492
HpyAV CCTTC 8 cut(s) 344, 652, 730, 744, 1027, 1249, 1345, 1420
HpyCH4III ACNGT 8 cut(s) 52, 74, 212, 803, 878, 1207, 1706, 1943
HpyCH4IV ACGT 1 cut(s) 839
HpyCH4V TGCA 9 cut(s) 106, 162, 341, 582, 674, 1017, 1173, 1190, 1709
HpyF10VI GCNNNNNNNGC 4 cut(s) 112, 671, 680, 774
HpyF3I CTNAG 8 cut(s) 264, 409, 492, 571, 861, 1011, 1231, 1306
HpySE526I ACGT 1 cut(s) 839
HspAI GCGC 1 cut(s) 489
Kpn2I TCCGGA 1 cut(s) 1027
KspI CCGCGG 1 cut(s) 1345
Kzo9I GATC 5 cut(s) 547, 939, 1459, 1768, 2072
LmnI GCTCC 4 cut(s) 567, 662, 1970, 2098
Lsp1109I GCAGC 2 cut(s) 1264, 1808
LweI GCATC 2 cut(s) 1160, 1883
MabI ACCWGGT 1 cut(s) 298
MaeI CTAG 8 cut(s) 116, 195, 420, 480, 521, 884, 1470, 1731
MaeII ACGT 1 cut(s) 839
MaeIII GTNAC 6 cut(s) 46, 241, 840, 1209, 1259, 1700
MalI GATC 5 cut(s) 549, 941, 1461, 1770, 2074
MboI GATC 5 cut(s) 547, 939, 1459, 1768, 2072
MfeI CAATTG 1 cut(s) 577
MflI RGATCY 1 cut(s) 1459
MhlI GDGCHC 3 cut(s) 164, 572, 1730
MlsI TGGCCA 1 cut(s) 1150
MluNI TGGCCA 1 cut(s) 1150
MlyI GAGTC 1 cut(s) 444
MmeI TCCRAC 4 cut(s) 119, 607, 764, 2076
Mox20I TGGCCA 1 cut(s) 1150
MroI TCCGGA 1 cut(s) 1027
MroXI GAANNNNTTC 1 cut(s) 1359
MscI TGGCCA 1 cut(s) 1150
MseI TTAA 6 cut(s) 650, 1196, 1290, 1449, 1632, 1830
MslI CAYNNNNRTG 2 cut(s) 167, 1613
Msp20I TGGCCA 1 cut(s) 1150
MspA1I CMGCKG 1 cut(s) 1344
MspCI CTTAAG 1 cut(s) 1829
MspI CCGG 2 cut(s) 173, 1028
MunI CAATTG 1 cut(s) 577
MvnI CGCG 1 cut(s) 1344
MwoI GCNNNNNNNGC 4 cut(s) 112, 671, 680, 774
NciI CCSGG 1 cut(s) 174
NdeII GATC 5 cut(s) 547, 939, 1459, 1768, 2072
NlaIV GGNNCC 4 cut(s) 297, 1684, 1727, 2100
NmuCI GTSAC 4 cut(s) 46, 840, 1209, 1700
NspI RCATGY 2 cut(s) 59, 669
PagI TCATGA 2 cut(s) 792, 1882
PciI ACATGT 1 cut(s) 55
PcsI WCGNNNNNNNCGW 1 cut(s) 2040
PdmI GAANNNNTTC 1 cut(s) 1359
PfeI GAWTC 4 cut(s) 365, 698, 1115, 1322
PfoI TCCNGGA 2 cut(s) 25, 2068
PkrI GCNGC 2 cut(s) 1254, 1823
PleI GAGTC 1 cut(s) 443
PpsI GAGTC 1 cut(s) 443
PscI ACATGT 1 cut(s) 55
PsiI TTATAA 4 cut(s) 402, 966, 1851, 2122
Psp124BI GAGCTC 1 cut(s) 572
PspEI GGTNACC 1 cut(s) 1700
PspFI CCCAGC 1 cut(s) 1097
PspN4I GGNNCC 4 cut(s) 297, 1684, 1727, 2100
PspPI GGNCC 1 cut(s) 12
PsrI GAACNNNNNNTAC 2 cut(s) 1558, 1590
PsuI RGATCY 1 cut(s) 1459
RsaI GTAC 5 cut(s) 36, 54, 975, 1474, 1529
RsaNI GTAC 5 cut(s) 35, 53, 974, 1473, 1528
RseI CAYNNNNRTG 2 cut(s) 167, 1613
SacI GAGCTC 1 cut(s) 572
SacII CCGCGG 1 cut(s) 1345
SaqAI TTAA 6 cut(s) 650, 1196, 1290, 1449, 1632, 1830
SatI GCNGC 2 cut(s) 1253, 1822
Sau3AI GATC 5 cut(s) 547, 939, 1459, 1768, 2072
Sau96I GGNCC 1 cut(s) 12
SchI GAGTC 1 cut(s) 444
SduI GDGCHC 3 cut(s) 164, 572, 1730
SexAI ACCWGGT 1 cut(s) 298
SfaNI GCATC 2 cut(s) 1160, 1883
SfcI CTRYAG 3 cut(s) 39, 874, 1761
Sfr303I CCGCGG 1 cut(s) 1345
SgrBI CCGCGG 1 cut(s) 1345
SmiMI CAYNNNNRTG 2 cut(s) 167, 1613
SmlI CTYRAG 4 cut(s) 866, 1435, 1829, 1997
SmoI CTYRAG 4 cut(s) 866, 1435, 1829, 1997
SpeI ACTAGT 1 cut(s) 479
SsiI CCGC 2 cut(s) 1342, 1344
SspI AATATT 1 cut(s) 85
SspMI CTAG 8 cut(s) 116, 195, 420, 480, 521, 884, 1470, 1731
SstI GAGCTC 1 cut(s) 572
StyI CCWWGG 3 cut(s) 563, 883, 977
TaaI ACNGT 8 cut(s) 52, 74, 212, 803, 878, 1207, 1706, 1943
TaiI ACGT 1 cut(s) 842
TatI WGTACW 3 cut(s) 52, 1472, 1527
TfiI GAWTC 4 cut(s) 365, 698, 1115, 1322
Tru1I TTAA 6 cut(s) 650, 1196, 1290, 1449, 1632, 1830
Tru9I TTAA 6 cut(s) 650, 1196, 1290, 1449, 1632, 1830
TscAI CASTG 2 cut(s) 113, 215
TseFI GTSAC 4 cut(s) 46, 840, 1209, 1700
TseI GCWGC 2 cut(s) 1252, 1821
Tsp45I GTSAC 4 cut(s) 46, 840, 1209, 1700
TspDTI ATGAA 8 cut(s) 156, 363, 552, 1236, 1390, 1557, 1911, 1968
TspGWI ACGGA 2 cut(s) 840, 1005
TspRI CASTG 2 cut(s) 113, 215
Vha464I CTTAAG 1 cut(s) 1829
VneI GTGCAC 1 cut(s) 160
XagI CCTNNNNNAGG 1 cut(s) 1829
XapI RAATTY 5 cut(s) 259, 275, 514, 711, 813
XceI RCATGY 2 cut(s) 59, 669
XmaJI CCTAGG 1 cut(s) 883
XmnI GAANNNNTTC 1 cut(s) 1359
XspI CTAG 8 cut(s) 116, 195, 420, 480, 521, 884, 1470, 1731
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.