RLG00000000867

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000630
Physical Location & Seq
Forward (+)
7120082 .. 7151840
31759 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000867

Sequence Viewer

Length: 2406 bp
ATGGCCCTTTCGGGGAAAGGGATAGAATCTGCACATGGGAATGTGGAAAGAAAGGGCAAAATCACAGTGGAAGAGTTTTCTTGTGACCATGACGGGAAGAAACAGGTTTTGCTCACTGGATTAGCTGATGTATGGCCTGCAAGGCGTACATGGACAGTTGACCACTTATTGCAGAATTATGGAGATACAGCTTTCAAGATTTCTCAAAGGAGCTCACTTAAAATCTCAATGACATTCAAGGATTATGTTTCAAATATGAAAGTTCAGCATGATGAGGATCCGCTTTATATCTTTGATCACAAGTTTGGAGAGGTTGAACCTGGCTTGTTGAAAGATTACAGTGTACCTTACCTATTTCAAGAGGACTTTTTTGAAGTTTTGGACAAAGATAAGCGACCTCCATTTAGATGGCTCATTATTGGTCCCCAGAGGTCTGGATCAAGGCTCTTGAAGCATACAATAGGATCGGTCACCCATTTCAGTGGAGGGCAATGGAACTCAGGTGGACATATCTTAACATTACTATTCTGTTTGTTTAGGTGGGCCTTGTATCCTCCAGGAAGAGTACCTATAGTTGTCACAGTACATGTAAACGAAGAAGACGGTGATGTCAATATTGAAACTCCAACTTCGTTGCAGTGGTGGCTAGATTTTTATCCACTTCTTGCTGATGAAGACAAGCCCATAGAGTGCACCCAAATGCCGGAGGAGACGCTTTTCGTTCCTAGTGGATGGTGGCACTGTGTCCTAAATCTTGAACCATCAATTGCTGTTACCCAGAACTTTGTAAATTCTAACAACTTTGAATTTGTGTGCTTGGATATGGCACCTGGTTATTGTCATAAGGGAGTTTGCCGTGCTGGATTACTTGCAGATGATGAAGGCAATGATTATAATTCCTCAGATATGACTAGGAAAGTAAAAAGAGTCAGAATTCTCAAATCTGGAGAATATCCTAGTGAAAGAACTAGTAATGGCGCTCGCGCTTCTTCTTATGATGTAAATTTCTTAGCCATGTATCTGGATGAAGAGAGAGATCATTACAACTCTCCTTGGAGCTCAGGCAATTGCATAGGGCAACGAGAAATGAGAGAATGGTTATTCAAGCTTTGGAGACTCAATCAGATCGATGAGAGAAACTCAGAAAGTAGCCCTAAATATCAGATCGATGAGAGATGCACAGTGCTTACCGGCGAGATCGATGAGAGTTTCGATTTCCGAAACGTTTATCTCATGAGCAACTGTTTAATCAAAATTTTTGTTGAGGAAGGACTGGAAACGTCACTTTATGGATTAGGTGCTGAGCTTGAGTTCTACAGTCTCCTAGGCAAAGTCAACTCCCCTCTGAAAAATCAAATACCTGACGTTTTGGCAAGTGGGATCATTTATCTTGAAAATGGAACTTATAAAATTGTGCCTTGGAATGGTAACAGAGTTCCTGATGTGATTGCTAAGTGCAATTTTATTCCGGAGAAGGTCGAAGGAGATGTTTCTCCTTTTGGTGTATGGAGGAAGAAACAATTTGAATACAGAAAAGCTGGGGTCTCAACAAACAAATCCATCAGTTCCGCTGAATATACAAGGATATGGGCATATCTCATAACCAAACGATGCAAAGGAAAATATATGCAGAGTTGTAAAAGAGATACTGTGTCACGGGAAGATGAACTGAACTTAGCTTCCTTCCTGGGAGAGCAGCTCCGTAACCTCCATCAATTGCCGCATCCACCTGTTAATATCTCAACTTTCTCAGATATTGATGCAGAATCAGATTTTCCCTTCACCAGCGGTAGTATGGAAGCTGTTCCCAATAAATCAAACAGTCCTGCTGAGTGGGATATATGCATTAGAACTCTATCCAAGAAGAAGGATGTCTCAATGTTGGCAATCAACTATAATTACCTTCTTTCACCTTGTAGGGGAGATCCAATTCCTAGCACACTCATAGAGAAAGTTGATAAATACATCCCAGATGATTTTGCCAAGTTTCTGTACATATTCAAGGATGAAAACGGTGTGAGCAAAGTTGGTAAAAGTTGTTCGTGGATACACTCTGATATCATGGATGACAACATTCACATGGAACTATGTGGTTTTAATTCTTGCTTCATTGGCAACGCCAAAAATACTTGCCTGGTAAAGAATGGTTCCTTGGATGTTGATGATGACCGTGCAGAGAGGAAAACATGGTGCCCTAGCCACATTCTTGATTTCAGTAATCTTTCTATAGAGCCATCAGCAAGGCTGGACCCAGTAATCTTTAGAGAATGGGTTCTTCTTCTTGTGCAGAAGGCTCCTCTGCCTCTGGCATTTGATAAAGTTAGAGATGAATGCATGGGATTTGGTAAAGCTATTGCTATGGCTGCCATTGCCAATGCCATCCTCACTGTCTCAAACACTGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
APH Cupin_8 F-box F-box-like JmjC

Protein Analysis

802

Amino Acids

90.99

Weight (kDa)

5.45

Isoelectric Point (pI)

41.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cupin_8 PF13621 180 - 266 1.4e-06 Cupin-like domain
JmjC PF02373 225 - 262 7.2e-07 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000630)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78280
fragaria_vesca FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800
malus_domestica MD08G1186800.v1.1 MD15G1372700.v1.1
prunus_persica Prupe.1G521300_v2.0.a1 Prupe.1G521300_v2.0.a1
pyrus_communis pycom08g16060 pycom15g33370
rosa_chinensis RchiOBHm_Chr2g0139391 RchiOBHm_Chr7g0242931 RchiOBHm_Chr7g0242951 RchiOBHm_Chr7g0243001 RchiOBHm_Chr7g0243011 RchiOBHm_Chr7g0243141 RchiOBHm_Chr7g0243151 RchiOBHm_Chr7g0243351
rosa_laevigata RLG00000000853 RLG00000000857 RLG00000000858 RLG00000000863 RLG00000000867
rosa_multiflora Rmu_co8457323.1_g000001 Rmu_sc0000083.1_g000017 Rmu_sc0000679.1_g000021 Rmu_sc0001036.1_g000029 Rmu_sc0001036.1_g000032 Rmu_sc0001176.1_g000015 Rmu_sc0001461.1_g000002 Rmu_sc0001461.1_g000003 Rmu_sc0001461.1_g000056 Rmu_sc0001461.1_g000057 Rmu_sc0001461.1_g000098 Rmu_sc0001461.1_g000105 Rmu_sc0004165.1_g000084 Rmu_sc0006141.1_g000004 Rmu_sc0033806.1_g000001
rosa_roxburghii Rroxscaffold_3G00222160 Rroxscaffold_3G00222220 Rroxscaffold_4G00316290
rosa_rugosa Rorug07G0318400 Rorug07G0318400 Rorug07G0318600
rosa_samantha Rh4CG066500 Rh5DG444300 Rh7AG473700 Rh7AG473900 Rh7AG474000 Rh7AG474600 Rh7AG474800 Rh7BG444500 Rh7BG444700 Rh7CG490700 Rh7CG490800 Rh7CG491000 Rh7DG458900 Rh7DG459000 Rh7DG459300
rosa_wichuraiana Rw7G038970 Rw7G039050 Rw7G039420 Rw7G039480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 894, 1407
AasI GACNNNNNNGTC 1 cut(s) 608
AccB1I GGYRCC 2 cut(s) 826, 2190
AccII CGCG 1 cut(s) 984
AccIII TCCGGA 1 cut(s) 1468
AciI CCGC 4 cut(s) 281, 1569, 1721, 1788
AclI AACGTT 1 cut(s) 1224
AclWI GGATC 6 cut(s) 272, 285, 445, 472, 1388, 1919
AcsI RAATTY 5 cut(s) 790, 806, 933, 1003, 1254
AfaI GTAC 5 cut(s) 148, 345, 567, 585, 1994
AfiI CCNNNNNNNGG 4 cut(s) 12, 703, 1424, 1919
AflIII ACRYGT 1 cut(s) 586
AhlI ACTAGT 1 cut(s) 968
AjnI CCWGG 5 cut(s) 319, 556, 829, 1686, 2133
AjuI GAANNNNNNNTTGG 2 cut(s) 2135, 2167
AloI GAACNNNNNNTCC 2 cut(s) 1664, 1696
Alw21I GWGCWC 3 cut(s) 215, 695, 1061
Alw26I GTCTC 6 cut(s) 704, 1108, 1325, 1549, 1879, 2395
Alw44I GTGCAC 1 cut(s) 691
AlwI GGATC 6 cut(s) 272, 285, 445, 472, 1388, 1919
Aor13HI TCCGGA 1 cut(s) 1468
AoxI GGCC 3 cut(s) 3, 134, 543
ApaLI GTGCAC 1 cut(s) 691
ApeKI GCWGC 2 cut(s) 1696, 2363
ApoI RAATTY 5 cut(s) 790, 806, 933, 1003, 1254
Asp700I GAANNNNTTC 2 cut(s) 1803, 2271
AspA2I CCTAGG 1 cut(s) 1324
AspLEI GCGC 2 cut(s) 980, 986
AspS9I GGNCC 4 cut(s) 4, 422, 543, 2248
AsuHPI GGTGA 4 cut(s) 463, 617, 1774, 1902
AvaII GGWCC 2 cut(s) 422, 2248
AvrII CCTAGG 1 cut(s) 1324
BaeGI GKGCMC 2 cut(s) 695, 2195
BamHI GGATCC 1 cut(s) 277
BanI GGYRCC 2 cut(s) 826, 2190
BanII GRGCYC 2 cut(s) 215, 1061
BbsI GAAGAC 2 cut(s) 606, 681
Bbv12I GWGCWC 3 cut(s) 215, 695, 1061
BbvI GCAGC 2 cut(s) 1708, 2350
BccI CCATC 7 cut(s) 402, 726, 769, 1568, 1719, 2242, 2387
BceAI ACGGC 1 cut(s) 840
BciT130I CCWGG 5 cut(s) 321, 558, 831, 1688, 2135
BciVI GTATCC 2 cut(s) 561, 2040
BclI TGATCA 1 cut(s) 295
BcoDI GTCTC 6 cut(s) 704, 1108, 1325, 1549, 1879, 2395
BcuI ACTAGT 1 cut(s) 968
BfaI CTAG 8 cut(s) 647, 726, 912, 957, 969, 1325, 1935, 2196
BfmI CTRYAG 3 cut(s) 570, 1315, 2226
BfoI RGCGCY 1 cut(s) 981
BfuI GTATCC 2 cut(s) 561, 2040
BglI GCCNNNNNGGC 1 cut(s) 142
BisI GCNGC 3 cut(s) 1697, 1721, 2364
BlnI CCTAGG 1 cut(s) 1324
BlpI GCTNAGC 1 cut(s) 1302
BlsI GCNGC 3 cut(s) 1698, 1722, 2365
Bme1390I CCNGG 5 cut(s) 321, 558, 831, 1688, 2135
Bme18I GGWCC 2 cut(s) 422, 2248
BmgT120I GGNCC 4 cut(s) 4, 422, 543, 2248
BmiI GGNNCC 7 cut(s) 279, 424, 828, 2149, 2192, 2250, 2295
BmrFI CCNGG 5 cut(s) 321, 558, 831, 1688, 2135
BmrI ACTGGG 1 cut(s) 2246
BmsI GCATC 4 cut(s) 1166, 1601, 1732, 1750
BmuI ACTGGG 1 cut(s) 2246
BpiI GAAGAC 2 cut(s) 606, 681
BplI GAGNNNNNCTC 4 cut(s) 1124, 1156, 1683, 1715
BpmI CTGGAG 2 cut(s) 540, 966
Bpu10I CCTNAGC 1 cut(s) 1060
Bpu1102I GCTNAGC 1 cut(s) 1302
BpuEI CTTGAG 1 cut(s) 1328
Bsa29I ATCGAT 3 cut(s) 1128, 1167, 1200
BsaBI GATNNNNATC 2 cut(s) 276, 654
BsaI GGTCTC 1 cut(s) 1549
BsaJI CCNNGG 5 cut(s) 1052, 1324, 1418, 1687, 2151
BsaWI WCCGGW 1 cut(s) 1468
Bsc4I CCNNNNNNNGG 4 cut(s) 12, 703, 1424, 1919
Bse118I RCCGGY 1 cut(s) 1190
Bse1I ACTGG 4 cut(s) 121, 1278, 2252, 2404
Bse3DI GCAATG 3 cut(s) 497, 892, 2367
Bse8I GATNNNNATC 2 cut(s) 276, 654
BseAI TCCGGA 1 cut(s) 1468
BseBI CCWGG 5 cut(s) 321, 558, 831, 1688, 2135
BseCI ATCGAT 3 cut(s) 1128, 1167, 1200
BseDI CCNNGG 5 cut(s) 1052, 1324, 1418, 1687, 2151
BseGI GGATG 9 cut(s) 737, 1030, 1723, 1876, 1965, 2011, 2071, 2161, 2379
BseJI GATNNNNATC 2 cut(s) 276, 654
BseLI CCNNNNNNNGG 4 cut(s) 12, 703, 1424, 1919
BseMI GCAATG 3 cut(s) 497, 892, 2367
BseMII CTCAG 7 cut(s) 513, 915, 1074, 1155, 1293, 1764, 1821
BseNI ACTGG 4 cut(s) 121, 1278, 2252, 2404
BseRI GAGGAG 2 cut(s) 722, 2286
BseSI GKGCMC 2 cut(s) 695, 2195
BseXI GCAGC 2 cut(s) 1708, 2350
BseYI CCCAGC 1 cut(s) 1538
BsgI GTGCAG 3 cut(s) 15, 2193, 2306
Bsh1236I CGCG 1 cut(s) 984
BshFI GGCC 3 cut(s) 5, 136, 545
BshNI GGYRCC 2 cut(s) 826, 2190
BshVI ATCGAT 3 cut(s) 1128, 1167, 1200
BsiHKAI GWGCWC 3 cut(s) 215, 695, 1061
BsiSI CCGG 3 cut(s) 704, 1191, 1469
BslFI GGGAC 1 cut(s) 408
BslI CCNNNNNNNGG 4 cut(s) 12, 703, 1424, 1919
BsmAI GTCTC 6 cut(s) 704, 1108, 1325, 1549, 1879, 2395
BsmBI CGTCTC 1 cut(s) 704
BsmFI GGGAC 1 cut(s) 408
BsmI GAATGC 1 cut(s) 2336
BsnI GGCC 3 cut(s) 5, 136, 545
Bso31I GGTCTC 1 cut(s) 1549
Bsp1286I GDGCHC 4 cut(s) 215, 695, 1061, 2195
Bsp13I TCCGGA 1 cut(s) 1468
Bsp1407I TGTACA 1 cut(s) 1992
Bsp1720I GCTNAGC 1 cut(s) 1302
BspACI CCGC 4 cut(s) 281, 1569, 1721, 1788
BspANI GGCC 3 cut(s) 5, 136, 545
BspCNI CTCAG 7 cut(s) 512, 914, 1073, 1154, 1294, 1763, 1822
BspDI ATCGAT 3 cut(s) 1128, 1167, 1200
BspEI TCCGGA 1 cut(s) 1468
BspFNI CGCG 1 cut(s) 984
BspHI TCATGA 1 cut(s) 1233
BspLI GGNNCC 7 cut(s) 279, 424, 828, 2149, 2192, 2250, 2295
BspPI GGATC 6 cut(s) 272, 285, 445, 472, 1388, 1919
BspT107I GGYRCC 2 cut(s) 826, 2190
BspTNI GGTCTC 1 cut(s) 1549
BsrDI GCAATG 3 cut(s) 497, 892, 2367
BsrFI RCCGGY 1 cut(s) 1190
BsrGI TGTACA 1 cut(s) 1992
BsrI ACTGG 4 cut(s) 121, 1278, 2252, 2404
BssAI RCCGGY 1 cut(s) 1190
BssECI CCNNGG 5 cut(s) 1052, 1324, 1418, 1687, 2151
BssT1I CCWWGG 4 cut(s) 1052, 1324, 1418, 2151
Bst2UI CCWGG 5 cut(s) 321, 558, 831, 1688, 2135
Bst6I CTCTTC 3 cut(s) 66, 556, 1023
BstAUI TGTACA 1 cut(s) 1992
BstC8I GCNNGC 2 cut(s) 138, 982
BstEII GGTNACC 1 cut(s) 469
BstF5I GGATG 9 cut(s) 737, 1030, 1723, 1876, 1965, 2011, 2071, 2161, 2379
BstFNI CGCG 1 cut(s) 984
BstH2I RGCGCY 1 cut(s) 981
BstHHI GCGC 2 cut(s) 980, 986
BstMAI GTCTC 6 cut(s) 704, 1108, 1325, 1549, 1879, 2395
BstMWI GCNNNNNNNGC 6 cut(s) 142, 451, 643, 2112, 2363, 2369
BstNI CCWGG 5 cut(s) 321, 558, 831, 1688, 2135
BstNSI RCATGY 1 cut(s) 590
BstPI GGTNACC 1 cut(s) 469
BstSCI CCNGG 5 cut(s) 319, 556, 829, 1686, 2133
BstSFI CTRYAG 3 cut(s) 570, 1315, 2226
BstSLI GKGCMC 2 cut(s) 695, 2195
BstUI CGCG 1 cut(s) 984
BstV1I GCAGC 2 cut(s) 1708, 2350
BstV2I GAAGAC 2 cut(s) 606, 681
BstX2I RGATCY 2 cut(s) 277, 1924
BstXI CCANNNNNNTGG 4 cut(s) 408, 434, 482, 1021
BstYI RGATCY 2 cut(s) 277, 1924
Bsu15I ATCGAT 3 cut(s) 1128, 1167, 1200
BsuI GTATCC 2 cut(s) 561, 2040
BsuRI GGCC 3 cut(s) 5, 136, 545
BsuTUI ATCGAT 3 cut(s) 1128, 1167, 1200
BtsCI GGATG 9 cut(s) 737, 1030, 1723, 1876, 1965, 2011, 2071, 2161, 2379
BtsI GCAGTG 1 cut(s) 644
BtsIMutI CAGTG 9 cut(s) 72, 114, 346, 487, 644, 739, 1188, 2385, 2397
Cac8I GCNNGC 2 cut(s) 138, 982
CciI TCATGA 1 cut(s) 1233
CfoI GCGC 2 cut(s) 980, 986
Cfr10I RCCGGY 1 cut(s) 1190
Cfr13I GGNCC 4 cut(s) 4, 422, 543, 2248
ClaI ATCGAT 3 cut(s) 1128, 1167, 1200
CseI GACGC 1 cut(s) 721
CsiI ACCWGGT 1 cut(s) 829
Csp6I GTAC 5 cut(s) 147, 344, 566, 584, 1993
CviQI GTAC 5 cut(s) 147, 344, 566, 584, 1993
DrdI GACNNNNNNGTC 1 cut(s) 608
DseDI GACNNNNNNGTC 1 cut(s) 608
Eam1104I CTCTTC 3 cut(s) 66, 556, 1023
EarI CTCTTC 3 cut(s) 66, 556, 1023
Ecl136II GAGCTC 2 cut(s) 213, 1059
Eco130I CCWWGG 4 cut(s) 1052, 1324, 1418, 2151
Eco24I GRGCYC 2 cut(s) 215, 1061
Eco31I GGTCTC 1 cut(s) 1549
Eco32I GATATC 1 cut(s) 2059
Eco47I GGWCC 2 cut(s) 422, 2248
Eco53kI GAGCTC 2 cut(s) 213, 1059
Eco91I GGTNACC 1 cut(s) 469
EcoICRI GAGCTC 2 cut(s) 213, 1059
EcoO65I GGTNACC 1 cut(s) 469
EcoRI GAATTC 1 cut(s) 933
EcoRII CCWGG 5 cut(s) 319, 556, 829, 1686, 2133
EcoRV GATATC 1 cut(s) 2059
EcoT14I CCWWGG 4 cut(s) 1052, 1324, 1418, 2151
EcoT22I ATGCAT 2 cut(s) 1847, 2336
EcoT38I GRGCYC 2 cut(s) 215, 1061
ErhI CCWWGG 4 cut(s) 1052, 1324, 1418, 2151
Esp3I CGTCTC 1 cut(s) 704
FaqI GGGAC 1 cut(s) 408
FbaI TGATCA 1 cut(s) 295
Fnu4HI GCNGC 3 cut(s) 1697, 1721, 2364
FokI GGATG 9 cut(s) 744, 1037, 1710, 1883, 1952, 2018, 2078, 2168, 2366
FriOI GRGCYC 2 cut(s) 215, 1061
Fsp4HI GCNGC 3 cut(s) 1697, 1721, 2364
FspBI CTAG 8 cut(s) 647, 726, 912, 957, 969, 1325, 1935, 2196
GlaI GCGC 2 cut(s) 979, 985
GluI GCNGC 3 cut(s) 1697, 1721, 2364
GsaI CCCAGC 1 cut(s) 1542
GsuI CTGGAG 2 cut(s) 540, 966
HaeII RGCGCY 1 cut(s) 981
HaeIII GGCC 3 cut(s) 5, 136, 545
HapII CCGG 3 cut(s) 704, 1191, 1469
HgaI GACGC 1 cut(s) 721
HhaI GCGC 2 cut(s) 980, 986
Hin6I GCGC 2 cut(s) 978, 984
HinP1I GCGC 2 cut(s) 978, 984
HincII GTYRAC 2 cut(s) 160, 1336
HindII GTYRAC 2 cut(s) 160, 1336
HindIII AAGCTT 1 cut(s) 1106
HinfI GANTC 4 cut(s) 26, 927, 1116, 1766
HpaII CCGG 3 cut(s) 704, 1191, 1469
HphI GGTGA 4 cut(s) 463, 617, 1774, 1902
Hpy166II GTNNAC 6 cut(s) 160, 344, 506, 592, 693, 1336
Hpy8I GTNNAC 6 cut(s) 160, 344, 506, 592, 693, 1336
HpyAV CCTTC 9 cut(s) 875, 1262, 1468, 1475, 1693, 1789, 1861, 1913, 2284
HpyCH4IV ACGT 3 cut(s) 1224, 1280, 1365
HpyF10VI GCNNNNNNNGC 6 cut(s) 142, 451, 643, 2112, 2363, 2369
HpySE526I ACGT 3 cut(s) 1224, 1280, 1365
HspAI GCGC 2 cut(s) 978, 984
Kpn2I TCCGGA 1 cut(s) 1468
Ksp22I TGATCA 1 cut(s) 295
LmnI GCTCC 4 cut(s) 210, 1056, 1704, 2299
Lsp1109I GCAGC 2 cut(s) 1708, 2350
LweI GCATC 4 cut(s) 1166, 1601, 1732, 1750
MabI ACCWGGT 1 cut(s) 829
MaeI CTAG 8 cut(s) 647, 726, 912, 957, 969, 1325, 1935, 2196
MaeII ACGT 3 cut(s) 1224, 1280, 1365
MaeIII GTNAC 8 cut(s) 83, 469, 577, 772, 1281, 1427, 1653, 1703
MfeI CAATTG 3 cut(s) 765, 1066, 1715
MflI RGATCY 2 cut(s) 277, 1924
MhlI GDGCHC 4 cut(s) 215, 695, 1061, 2195
MlyI GAGTC 2 cut(s) 936, 1110
MmeI TCCRAC 1 cut(s) 650
Mph1103I ATGCAT 2 cut(s) 1847, 2336
MroI TCCGGA 1 cut(s) 1468
MroXI GAANNNNTTC 2 cut(s) 1803, 2271
MseI TTAA 5 cut(s) 219, 515, 1247, 1734, 2097
MslI CAYNNNNRTG 5 cut(s) 39, 406, 480, 698, 2078
MspA1I CMGCKG 2 cut(s) 1571, 1788
MspI CCGG 3 cut(s) 704, 1191, 1469
MspR9I CCNGG 5 cut(s) 321, 558, 831, 1688, 2135
MunI CAATTG 3 cut(s) 765, 1066, 1715
Mva1269I GAATGC 1 cut(s) 2336
MvaI CCWGG 5 cut(s) 321, 558, 831, 1688, 2135
MvnI CGCG 1 cut(s) 984
MwoI GCNNNNNNNGC 6 cut(s) 142, 451, 643, 2112, 2363, 2369
NlaIV GGNNCC 7 cut(s) 279, 424, 828, 2149, 2192, 2250, 2295
NmuCI GTSAC 5 cut(s) 83, 469, 577, 1281, 1653
NsiI ATGCAT 2 cut(s) 1847, 2336
NspI RCATGY 1 cut(s) 590
PagI TCATGA 1 cut(s) 1233
PciI ACATGT 1 cut(s) 586
PctI GAATGC 1 cut(s) 2336
PdmI GAANNNNTTC 2 cut(s) 1803, 2271
PfeI GAWTC 2 cut(s) 26, 1766
PfoI TCCNGGA 1 cut(s) 556
PkrI GCNGC 3 cut(s) 1698, 1722, 2365
PleI GAGTC 2 cut(s) 935, 1110
PpsI GAGTC 2 cut(s) 935, 1110
PscI ACATGT 1 cut(s) 586
PsiI TTATAA 2 cut(s) 894, 1407
Psp124BI GAGCTC 2 cut(s) 215, 1061
Psp1406I AACGTT 1 cut(s) 1224
Psp6I CCWGG 5 cut(s) 319, 556, 829, 1686, 2133
PspEI GGTNACC 1 cut(s) 469
PspFI CCCAGC 1 cut(s) 1538
PspGI CCWGG 5 cut(s) 319, 556, 829, 1686, 2133
PspN4I GGNNCC 7 cut(s) 279, 424, 828, 2149, 2192, 2250, 2295
PspPI GGNCC 4 cut(s) 4, 422, 543, 2248
PsrI GAACNNNNNNTAC 2 cut(s) 2023, 2055
PsuI RGATCY 2 cut(s) 277, 1924
RsaI GTAC 5 cut(s) 148, 345, 567, 585, 1994
RsaNI GTAC 5 cut(s) 147, 344, 566, 584, 1993
RseI CAYNNNNRTG 5 cut(s) 39, 406, 480, 698, 2078
SacI GAGCTC 2 cut(s) 215, 1061
SaqAI TTAA 5 cut(s) 219, 515, 1247, 1734, 2097
SatI GCNGC 3 cut(s) 1697, 1721, 2364
Sau96I GGNCC 4 cut(s) 4, 422, 543, 2248
SchI GAGTC 2 cut(s) 936, 1110
ScrFI CCNGG 5 cut(s) 321, 558, 831, 1688, 2135
SduI GDGCHC 4 cut(s) 215, 695, 1061, 2195
SexAI ACCWGGT 1 cut(s) 829
SfaNI GCATC 4 cut(s) 1166, 1601, 1732, 1750
SfcI CTRYAG 3 cut(s) 570, 1315, 2226
SinI GGWCC 2 cut(s) 422, 2248
SmiMI CAYNNNNRTG 5 cut(s) 39, 406, 480, 698, 2078
SmlI CTYRAG 1 cut(s) 1307
SmoI CTYRAG 1 cut(s) 1307
SpeI ACTAGT 1 cut(s) 968
SsiI CCGC 4 cut(s) 281, 1569, 1721, 1788
SspI AATATT 1 cut(s) 616
SspMI CTAG 8 cut(s) 647, 726, 912, 957, 969, 1325, 1935, 2196
SstI GAGCTC 2 cut(s) 215, 1061
StyD4I CCNGG 5 cut(s) 319, 556, 829, 1686, 2133
StyI CCWWGG 4 cut(s) 1052, 1324, 1418, 2151
TaiI ACGT 3 cut(s) 1227, 1283, 1368
TaqI TCGA 5 cut(s) 1128, 1167, 1200, 1212, 1479
TaqII GACCGA 1 cut(s) 457
TatI WGTACW 2 cut(s) 583, 1992
TauI GCSGC 1 cut(s) 1723
TfiI GAWTC 2 cut(s) 26, 1766
Tru1I TTAA 5 cut(s) 219, 515, 1247, 1734, 2097
Tru9I TTAA 5 cut(s) 219, 515, 1247, 1734, 2097
TscAI CASTG 9 cut(s) 72, 121, 346, 487, 644, 746, 1188, 2392, 2404
TseFI GTSAC 5 cut(s) 83, 469, 577, 1281, 1653
TseI GCWGC 2 cut(s) 1696, 2363
Tsp45I GTSAC 5 cut(s) 83, 469, 577, 1281, 1653
TspDTI ATGAA 8 cut(s) 272, 687, 894, 1041, 1680, 2022, 2098, 2343
TspGWI ACGGA 1 cut(s) 1691
TspRI CASTG 9 cut(s) 72, 121, 346, 487, 644, 746, 1188, 2392, 2404
VneI GTGCAC 1 cut(s) 691
VpaK11BI GGWCC 2 cut(s) 422, 2248
XapI RAATTY 5 cut(s) 790, 806, 933, 1003, 1254
XceI RCATGY 1 cut(s) 590
XcmI CCANNNNNNNNNTGG 1 cut(s) 1792
XmaJI CCTAGG 1 cut(s) 1324
XmnI GAANNNNTTC 2 cut(s) 1803, 2271
XspI CTAG 8 cut(s) 647, 726, 912, 957, 969, 1325, 1935, 2196
Zsp2I ATGCAT 2 cut(s) 1847, 2336
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.