Rmu_sc0001036.1_g000029

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001036.1
OG0000630
Physical Location & Seq
Forward (+)
111401 .. 118458
7058 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001036.1_g000029.1.cds

Sequence Viewer

Length: 2694 bp
atggagatttccgaagcccctcccttccggccaagagatcgccgcccggacgccctcggaaacttcctagtcctccccgacgagctcatctgtaccgtcttggagttgctctctcctcgcgatgttgctcgcctctcctgcgttagcagtgtgatgtatatattttgcaatgaagagccactctggttgagtttatgcctcaacacactgaacggtccactcgagtacgaaggctcctggaaaaagacggtgctgcatttggagaatgtgtcgtatgaacgcgacgaggcttgcagaaaaccactgaattttgatggattcgactctttgttcttgtacagaagattatacaggtgtcataccacattggatggtttttcttttgacaatgggaatgtggaaagaaaggacaagatcacattggaagagttttcttgtgactatgatgggaagaaaccgggagaaccagtttgttttgcacttaaagattatgtttcatatatgaaggttcagcatgatgaggatccactttatatcttcgatcacaagtttggagaggttgaacctggcttgttgaaagattacagtgtaccttatctatttcaagaggacttttttgatgttttggacaaagataagcgacctccatttagatggctcattattggtccccagaggtctggtgcttcttggcatgttgatccagctctgaccagtgcctggaatacacttctatgtggtcgtaaaaggtgggccttgtatcctccaggaagggtacctataggtgtcacagtacatgtaaacgaagaagacggtgatgtcaatattgaaactccaacttcgttgcagtggtggctagatttttatccacttcttgctgatgaagacaagcccatagagtgcacccaaatgccgggggagacgattttcgttccaagtggatggtggcactgtgtcctaaatcttgaaccatctattgctgttacccagaactttgtgaattctaagaactttgaatttgtgtgcttggatatggcacctggttatcgtcacaagggagtttgccgtgctggattacttgcagatgatgaaggcagtattgaggattccacaaatcatatactctatgataaagatgataataattcctcagatatgactaggaaagtaaaaagagtcagaactctcaaacctggagaatatcctagtactgaaagaactagtaatggtgctcagggtttttcttatgatgtaaatttcttagccatgtatctggatgaagagagagatcattacaactctccttggagctcaggcaattgcatagggcaacgagaaatgagagaatggttattcaagctttgggttggaaaaccaggaatgagagacttgatctggaagggagcatgtctcgcactaaatgctagcaaatggtcagaatccctggcagaaatttgtgccttccacagattgccttctccaacagatgatgagaggcttccagttggcacgggtagcaatcctcttgagttctacagtctcctaggcaaagtcaactcccctctgaaaaatcaagtacctgacgttttggcaagtgggatcatttatcttgaacatggaacgtataaaattgtaccttgggatggcatcagagttcctgatgtgattgctaactgcaattttattctggagaaggtcaaaggagatgtttctccttttggtgtatggaggaagaaacaatttgaatacagaaaagctggggtctcaacaaacgaatccatcagttcagctgaatatacaaggatatggccatatctcataacaaaacgatgcaaaggaaaaatatatgcagagttaagagatactgtgtcacgggaagatgaactgaacttagcttccttcctgggagagcagctccgtaacctccatctcttgccccatccacctcttaatatctcaactttctcagatattgaacagggatcagattttccattcaccaacggtagtatggaagctgttccccataaatcaaacattcctgctgaatgggatatattcattagaactctattcaagaaaaagaaggatgtctcaagtcgcttgattaaatggggagatccaattcctagcacactcatagagaaagttgacaagtacatcccagatgattttgccaagtttctgtacatgttcaaggatgaaaatggtgtaagcaaagttggtaaaagttgttcgtggatacactctgatatcatggatgacaacattcacatggaactatttggttttaattcttgcttcattggcaacgccaaagacacttgcctggtaaataatggttccttgaatgttgatggtgaccgtgcagagaggaaaacatggtgccctagccacattcttgatttcagtaatctttctataggtgatcccatctatgatttgatacccttatacttggatatattcagaggtgattgctacctccttaagcaatttctagatagttataaacttcctttagtaagacaagcatcacctcatgagtatatggagggtggcaacaagtttggacgactttcctaccatgccatgacgctctacagacttgattcacggtcatcttctcaaatcctgcctgtcaatcgccttgtggcacaactcaactcattagcagactcatctcgtggatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
APH Cupin_8 F-box F-box-like JmjC

Protein Analysis

897

Amino Acids

102.58

Weight (kDa)

5.38

Isoelectric Point (pI)

44.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000630)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78280
fragaria_vesca FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800
malus_domestica MD08G1186800.v1.1 MD15G1372700.v1.1
prunus_persica Prupe.1G521300_v2.0.a1 Prupe.1G521300_v2.0.a1
pyrus_communis pycom08g16060 pycom15g33370
rosa_chinensis RchiOBHm_Chr2g0139391 RchiOBHm_Chr7g0242931 RchiOBHm_Chr7g0242951 RchiOBHm_Chr7g0243001 RchiOBHm_Chr7g0243011 RchiOBHm_Chr7g0243141 RchiOBHm_Chr7g0243151 RchiOBHm_Chr7g0243351
rosa_laevigata RLG00000000853 RLG00000000857 RLG00000000858 RLG00000000863 RLG00000000867
rosa_multiflora Rmu_co8457323.1_g000001 Rmu_sc0000083.1_g000017 Rmu_sc0000679.1_g000021 Rmu_sc0001036.1_g000029 Rmu_sc0001036.1_g000032 Rmu_sc0001176.1_g000015 Rmu_sc0001461.1_g000002 Rmu_sc0001461.1_g000003 Rmu_sc0001461.1_g000056 Rmu_sc0001461.1_g000057 Rmu_sc0001461.1_g000098 Rmu_sc0001461.1_g000105 Rmu_sc0004165.1_g000084 Rmu_sc0006141.1_g000004 Rmu_sc0033806.1_g000001
rosa_roxburghii Rroxscaffold_3G00222160 Rroxscaffold_3G00222220 Rroxscaffold_4G00316290
rosa_rugosa Rorug07G0318400 Rorug07G0318400 Rorug07G0318600
rosa_samantha Rh4CG066500 Rh5DG444300 Rh7AG473700 Rh7AG473900 Rh7AG474000 Rh7AG474600 Rh7AG474800 Rh7BG444500 Rh7BG444700 Rh7CG490700 Rh7CG490800 Rh7CG491000 Rh7DG458900 Rh7DG459000 Rh7DG459300
rosa_wichuraiana Rw7G038970 Rw7G039050 Rw7G039420 Rw7G039480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2511
AasI GACNNNNNNGTC 1 cut(s) 818
Acc65I GGTACC 1 cut(s) 775
AccB1I GGYRCC 3 cut(s) 775, 1036, 2385
AccB7I CCANNNNNTGG 1 cut(s) 720
AccII CGCG 2 cut(s) 120, 282
AciI CCGC 1 cut(s) 43
AclWI GGATC 7 cut(s) 518, 531, 695, 1607, 1990, 2114, 2423
AcoI YGGCCR 2 cut(s) 29, 1808
AcsI RAATTY 5 cut(s) 307, 1000, 1016, 1255, 1452
AcyI GRCGYC 1 cut(s) 51
AfiI CCNNNNNNNGG 3 cut(s) 720, 913, 1643
AflII CTTAAG 1 cut(s) 2489
AflIII ACRYGT 2 cut(s) 796, 2190
AhlI ACTAGT 1 cut(s) 1220
AloI GAACNNNNNNTCC 2 cut(s) 1880, 1912
AluBI AGCT 9 cut(s) 85, 707, 1311, 1360, 1757, 1790, 1895, 1915, 2018
AluI AGCT 9 cut(s) 85, 707, 1311, 1360, 1757, 1790, 1895, 1915, 2018
Alw21I GWGCWC 4 cut(s) 87, 905, 1234, 1313
Alw26I GTCTC 6 cut(s) 914, 1380, 1415, 1544, 1768, 2098
Alw44I GTGCAC 1 cut(s) 901
AlwI GGATC 7 cut(s) 518, 531, 695, 1607, 1990, 2114, 2423
AlwNI CAGNNNCTG 1 cut(s) 720
Ama87I CYCGRG 1 cut(s) 221
AoxI GGCC 3 cut(s) 29, 753, 1808
ApaLI GTGCAC 1 cut(s) 901
ApeKI GCWGC 2 cut(s) 253, 1912
ApoI RAATTY 5 cut(s) 307, 1000, 1016, 1255, 1452
Asp700I GAANNNNTTC 1 cut(s) 2019
Asp718I GGTACC 1 cut(s) 775
AspA2I CCTAGG 1 cut(s) 1543
AspS9I GGNCC 3 cut(s) 215, 668, 753
AsuC2I CCSGG 3 cut(s) 47, 459, 915
AsuHPI GGTGA 6 cut(s) 827, 1990, 2372, 2438, 2486, 2529
AsuNHI GCTAGC 1 cut(s) 1424
AvaI CYCGRG 1 cut(s) 221
AvaII GGWCC 2 cut(s) 215, 668
AvrII CCTAGG 1 cut(s) 1543
BaeGI GKGCMC 2 cut(s) 905, 2390
BalI TGGCCA 1 cut(s) 1810
BamHI GGATCC 1 cut(s) 523
BanI GGYRCC 3 cut(s) 775, 1036, 2385
BanII GRGCYC 2 cut(s) 87, 1313
BauI CACGAG 1 cut(s) 2685
BbsI GAAGAC 2 cut(s) 816, 891
Bbv12I GWGCWC 4 cut(s) 87, 905, 1234, 1313
BbvI GCAGC 2 cut(s) 240, 1924
BceAI ACGGC 1 cut(s) 1050
BciVI GTATCC 2 cut(s) 771, 2235
BcnI CCSGG 3 cut(s) 47, 459, 915
BcoDI GTCTC 6 cut(s) 914, 1380, 1415, 1544, 1768, 2098
BcuI ACTAGT 1 cut(s) 1220
BfmI CTRYAG 4 cut(s) 780, 1534, 2421, 2602
BfrI CTTAAG 1 cut(s) 2489
BfuI GTATCC 2 cut(s) 771, 2235
BisI GCNGC 3 cut(s) 43, 254, 1913
BlnI CCTAGG 1 cut(s) 1543
BlsI GCNGC 3 cut(s) 44, 255, 1914
BmcAI AGTACT 1 cut(s) 1210
Bme18I GGWCC 2 cut(s) 215, 668
BmeT110I CYCGRG 1 cut(s) 221
BmgT120I GGNCC 3 cut(s) 215, 668, 753
BmiI GGNNCC 7 cut(s) 235, 525, 670, 777, 1038, 2344, 2387
BmsI GCATC 3 cut(s) 1656, 1820, 2543
BmtI GCTAGC 1 cut(s) 1428
BpiI GAAGAC 2 cut(s) 816, 891
BplI GAGNNNNNCTC 6 cut(s) 95, 127, 1395, 1427, 1899, 1931
BpmI CTGGAG 3 cut(s) 750, 1215, 1709
Bpu10I CCTNAGC 2 cut(s) 1233, 1312
BpuEI CTTGAG 2 cut(s) 1547, 2080
BpuMI CCSGG 3 cut(s) 47, 459, 915
BsaBI GATNNNNATC 2 cut(s) 522, 864
BsaHI GRCGYC 1 cut(s) 51
BsaI GGTCTC 1 cut(s) 1768
BsaJI CCNNGG 7 cut(s) 55, 914, 1304, 1443, 1543, 1637, 1903
BsaXI ACNNNNNCTCC 6 cut(s) 218, 248, 254, 284, 453, 483
Bsc4I CCNNNNNNNGG 3 cut(s) 720, 913, 1643
Bse1I ACTGG 3 cut(s) 467, 714, 1502
Bse3DI GCAATG 1 cut(s) 175
Bse8I GATNNNNATC 2 cut(s) 522, 864
BseDI CCNNGG 7 cut(s) 55, 914, 1304, 1443, 1543, 1637, 1903
BseGI GGATG 9 cut(s) 376, 947, 1282, 1648, 1939, 2095, 2160, 2206, 2266
BseJI GATNNNNATC 2 cut(s) 522, 864
BseLI CCNNNNNNNGG 3 cut(s) 720, 913, 1643
BseMI GCAATG 1 cut(s) 175
BseMII CTCAG 4 cut(s) 1164, 1247, 1326, 1980
BseNI ACTGG 3 cut(s) 467, 714, 1502
BseRI GAGGAG 1 cut(s) 105
BseSI GKGCMC 2 cut(s) 905, 2390
BseXI GCAGC 2 cut(s) 240, 1924
BseYI CCCAGC 1 cut(s) 1757
BsgI GTGCAG 1 cut(s) 2388
Bsh1236I CGCG 2 cut(s) 120, 282
BshFI GGCC 3 cut(s) 31, 755, 1810
BshNI GGYRCC 3 cut(s) 775, 1036, 2385
BsiHKAI GWGCWC 4 cut(s) 87, 905, 1234, 1313
BsiHKCI CYCGRG 1 cut(s) 221
BsiSI CCGG 4 cut(s) 28, 47, 458, 914
BslFI GGGAC 1 cut(s) 654
BslI CCNNNNNNNGG 3 cut(s) 720, 913, 1643
BsmAI GTCTC 6 cut(s) 914, 1380, 1415, 1544, 1768, 2098
BsmBI CGTCTC 1 cut(s) 914
BsmFI GGGAC 1 cut(s) 654
BsnI GGCC 3 cut(s) 31, 755, 1810
Bso31I GGTCTC 1 cut(s) 1768
BsoBI CYCGRG 1 cut(s) 221
Bsp1286I GDGCHC 5 cut(s) 87, 905, 1234, 1313, 2390
Bsp1407I TGTACA 2 cut(s) 336, 2187
Bsp68I TCGCGA 1 cut(s) 120
BspACI CCGC 1 cut(s) 43
BspANI GGCC 3 cut(s) 31, 755, 1810
BspCNI CTCAG 4 cut(s) 1163, 1246, 1325, 1979
BspFNI CGCG 2 cut(s) 120, 282
BspHI TCATGA 1 cut(s) 2542
BspLI GGNNCC 7 cut(s) 235, 525, 670, 777, 1038, 2344, 2387
BspOI GCTAGC 1 cut(s) 1428
BspPI GGATC 7 cut(s) 518, 531, 695, 1607, 1990, 2114, 2423
BspQI GCTCTTC 1 cut(s) 168
BspT107I GGYRCC 3 cut(s) 775, 1036, 2385
BspTI CTTAAG 1 cut(s) 2489
BspTNI GGTCTC 1 cut(s) 1768
BsrDI GCAATG 1 cut(s) 175
BsrGI TGTACA 2 cut(s) 336, 2187
BsrI ACTGG 3 cut(s) 467, 714, 1502
BssECI CCNNGG 7 cut(s) 55, 914, 1304, 1443, 1543, 1637, 1903
BssNI GRCGYC 1 cut(s) 51
BssSI CACGAG 1 cut(s) 2685
BssT1I CCWWGG 3 cut(s) 1304, 1543, 1637
Bst2BI CACGAG 1 cut(s) 2685
Bst6I CTCTTC 3 cut(s) 168, 420, 1275
BstACI GRCGYC 1 cut(s) 51
BstAFI CTTAAG 1 cut(s) 2489
BstAPI GCANNNNNTGC 1 cut(s) 1421
BstAUI TGTACA 2 cut(s) 336, 2187
BstC8I GCNNGC 3 cut(s) 130, 292, 1426
BstDEI CTNAG 7 cut(s) 1005, 1150, 1233, 1261, 1312, 1891, 1966
BstEII GGTNACC 1 cut(s) 2360
BstF5I GGATG 9 cut(s) 376, 947, 1282, 1648, 1939, 2095, 2160, 2206, 2266
BstFNI CGCG 2 cut(s) 120, 282
BstMAI GTCTC 6 cut(s) 914, 1380, 1415, 1544, 1768, 2098
BstMWI GCNNNNNNNGC 6 cut(s) 138, 853, 1412, 1421, 1515, 2307
BstNSI RCATGY 4 cut(s) 698, 800, 1410, 2194
BstPI GGTNACC 1 cut(s) 2360
BstSFI CTRYAG 4 cut(s) 780, 1534, 2421, 2602
BstSLI GKGCMC 2 cut(s) 905, 2390
BstUI CGCG 2 cut(s) 120, 282
BstV1I GCAGC 2 cut(s) 240, 1924
BstV2I GAAGAC 2 cut(s) 816, 891
BstX2I RGATCY 2 cut(s) 523, 2119
BstXI CCANNNNNNTGG 4 cut(s) 654, 680, 942, 1273
BstYI RGATCY 2 cut(s) 523, 2119
BsuI GTATCC 2 cut(s) 771, 2235
BsuRI GGCC 3 cut(s) 31, 755, 1810
BtgZI GCGATG 1 cut(s) 135
BtsCI GGATG 9 cut(s) 376, 947, 1282, 1648, 1939, 2095, 2160, 2206, 2266
BtsI GCAGTG 2 cut(s) 154, 854
BtsIMutI CAGTG 7 cut(s) 154, 206, 302, 592, 721, 854, 949
BtuMI TCGCGA 1 cut(s) 120
Cac8I GCNNGC 3 cut(s) 130, 292, 1426
CaiI CAGNNNCTG 1 cut(s) 720
CciI TCATGA 1 cut(s) 2542
Cfr13I GGNCC 3 cut(s) 215, 668, 753
CseI GACGC 2 cut(s) 59, 2605
CsiI ACCWGGT 1 cut(s) 1039
CspCI CAANNNNNGTGG 2 cut(s) 168, 203
DdeI CTNAG 7 cut(s) 1005, 1150, 1233, 1261, 1312, 1891, 1966
DrdI GACNNNNNNGTC 1 cut(s) 818
DseDI GACNNNNNNGTC 1 cut(s) 818
EaeI YGGCCR 2 cut(s) 29, 1808
Eam1104I CTCTTC 3 cut(s) 168, 420, 1275
EarI CTCTTC 3 cut(s) 168, 420, 1275
Ecl136II GAGCTC 2 cut(s) 85, 1311
Eco130I CCWWGG 3 cut(s) 1304, 1543, 1637
Eco24I GRGCYC 2 cut(s) 87, 1313
Eco31I GGTCTC 1 cut(s) 1768
Eco32I GATATC 1 cut(s) 2254
Eco47I GGWCC 2 cut(s) 215, 668
Eco53kI GAGCTC 2 cut(s) 85, 1311
Eco88I CYCGRG 1 cut(s) 221
Eco91I GGTNACC 1 cut(s) 2360
EcoICRI GAGCTC 2 cut(s) 85, 1311
EcoO65I GGTNACC 1 cut(s) 2360
EcoRI GAATTC 1 cut(s) 1000
EcoRV GATATC 1 cut(s) 2254
EcoT14I CCWWGG 3 cut(s) 1304, 1543, 1637
EcoT38I GRGCYC 2 cut(s) 87, 1313
ErhI CCWWGG 3 cut(s) 1304, 1543, 1637
Esp3I CGTCTC 1 cut(s) 914
FaqI GGGAC 1 cut(s) 654
Fnu4HI GCNGC 3 cut(s) 43, 254, 1913
FokI GGATG 9 cut(s) 383, 954, 1289, 1655, 1926, 2102, 2147, 2213, 2273
FriOI GRGCYC 2 cut(s) 87, 1313
Fsp4HI GCNGC 3 cut(s) 43, 254, 1913
GluI GCNGC 3 cut(s) 43, 254, 1913
GsaI CCCAGC 1 cut(s) 1761
GsuI CTGGAG 3 cut(s) 750, 1215, 1709
HaeIII GGCC 3 cut(s) 31, 755, 1810
HapII CCGG 4 cut(s) 28, 47, 458, 914
HgaI GACGC 2 cut(s) 59, 2605
Hin1I GRCGYC 1 cut(s) 51
HincII GTYRAC 2 cut(s) 1555, 2152
HindII GTYRAC 2 cut(s) 1555, 2152
HindIII AAGCTT 1 cut(s) 1358
HinfI GANTC 8 cut(s) 318, 323, 1106, 1176, 1439, 1775, 2612, 2678
HpaII CCGG 4 cut(s) 28, 47, 458, 914
HphI GGTGA 6 cut(s) 827, 1990, 2372, 2438, 2486, 2529
Hpy166II GTNNAC 6 cut(s) 218, 590, 802, 903, 1555, 2152
Hpy8I GTNNAC 6 cut(s) 218, 590, 802, 903, 1555, 2152
Hpy99I CGWCG 2 cut(s) 83, 287
HpyCH4IV ACGT 2 cut(s) 1584, 1622
HpyF10VI GCNNNNNNNGC 6 cut(s) 138, 853, 1412, 1421, 1515, 2307
HpyF3I CTNAG 7 cut(s) 1005, 1150, 1233, 1261, 1312, 1891, 1966
HpySE526I ACGT 2 cut(s) 1584, 1622
Hsp92I GRCGYC 1 cut(s) 51
KpnI GGTACC 1 cut(s) 779
LguI GCTCTTC 1 cut(s) 168
LmnI GCTCC 4 cut(s) 239, 1308, 1403, 1920
Lsp1109I GCAGC 2 cut(s) 240, 1924
LweI GCATC 3 cut(s) 1656, 1820, 2543
MabI ACCWGGT 1 cut(s) 1039
MaeII ACGT 2 cut(s) 1584, 1622
MaeIII GTNAC 7 cut(s) 437, 787, 982, 1049, 1869, 1919, 2360
MfeI CAATTG 1 cut(s) 1318
MflI RGATCY 2 cut(s) 523, 2119
MhlI GDGCHC 5 cut(s) 87, 905, 1234, 1313, 2390
MlsI TGGCCA 1 cut(s) 1810
MluNI TGGCCA 1 cut(s) 1810
MlyI GAGTC 3 cut(s) 317, 1185, 2672
MmeI TCCRAC 3 cut(s) 860, 1348, 1505
Mox20I TGGCCA 1 cut(s) 1810
MroXI GAANNNNTTC 1 cut(s) 2019
MscI TGGCCA 1 cut(s) 1810
MseI TTAA 6 cut(s) 483, 1856, 1950, 2109, 2292, 2490
MslI CAYNNNNRTG 4 cut(s) 652, 733, 908, 2273
Msp20I TGGCCA 1 cut(s) 1810
MspA1I CMGCKG 1 cut(s) 1790
MspCI CTTAAG 1 cut(s) 2489
MspI CCGG 4 cut(s) 28, 47, 458, 914
MunI CAATTG 1 cut(s) 1318
MvnI CGCG 2 cut(s) 120, 282
MwoI GCNNNNNNNGC 6 cut(s) 138, 853, 1412, 1421, 1515, 2307
NciI CCSGG 3 cut(s) 47, 459, 915
NheI GCTAGC 1 cut(s) 1424
NlaIV GGNNCC 7 cut(s) 235, 525, 670, 777, 1038, 2344, 2387
NmuCI GTSAC 5 cut(s) 437, 787, 1049, 1869, 2360
NruI TCGCGA 1 cut(s) 120
NspI RCATGY 4 cut(s) 698, 800, 1410, 2194
PaeR7I CTCGAG 1 cut(s) 221
PagI TCATGA 1 cut(s) 2542
PciI ACATGT 2 cut(s) 796, 2190
PciSI GCTCTTC 1 cut(s) 168
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PdmI GAANNNNTTC 1 cut(s) 2019
PfeI GAWTC 5 cut(s) 318, 1106, 1439, 1775, 2612
PflMI CCANNNNNTGG 1 cut(s) 720
PfoI TCCNGGA 2 cut(s) 236, 766
PkrI GCNGC 3 cut(s) 44, 255, 1914
PleI GAGTC 3 cut(s) 317, 1184, 2672
PpsI GAGTC 3 cut(s) 317, 1184, 2672
PscI ACATGT 2 cut(s) 796, 2190
PsiI TTATAA 1 cut(s) 2511
Psp124BI GAGCTC 2 cut(s) 87, 1313
PspEI GGTNACC 1 cut(s) 2360
PspFI CCCAGC 1 cut(s) 1757
PspN4I GGNNCC 7 cut(s) 235, 525, 670, 777, 1038, 2344, 2387
PspPI GGNCC 3 cut(s) 215, 668, 753
PspXI VCTCGAGB 1 cut(s) 221
PsrI GAACNNNNNNTAC 2 cut(s) 2218, 2250
PstNI CAGNNNCTG 1 cut(s) 720
PsuI RGATCY 2 cut(s) 523, 2119
PvuII CAGCTG 1 cut(s) 1790
RruI TCGCGA 1 cut(s) 120
RseI CAYNNNNRTG 4 cut(s) 652, 733, 908, 2273
SacI GAGCTC 2 cut(s) 87, 1313
SapI GCTCTTC 1 cut(s) 168
SaqAI TTAA 6 cut(s) 483, 1856, 1950, 2109, 2292, 2490
SatI GCNGC 3 cut(s) 43, 254, 1913
Sau96I GGNCC 3 cut(s) 215, 668, 753
ScaI AGTACT 1 cut(s) 1210
SchI GAGTC 3 cut(s) 317, 1185, 2672
SduI GDGCHC 5 cut(s) 87, 905, 1234, 1313, 2390
SexAI ACCWGGT 1 cut(s) 1039
SfaNI GCATC 3 cut(s) 1656, 1820, 2543
SfcI CTRYAG 4 cut(s) 780, 1534, 2421, 2602
Sfr274I CTCGAG 1 cut(s) 221
SinI GGWCC 2 cut(s) 215, 668
SlaI CTCGAG 1 cut(s) 221
SmiMI CAYNNNNRTG 4 cut(s) 652, 733, 908, 2273
SmlI CTYRAG 4 cut(s) 221, 1526, 2095, 2489
SmoI CTYRAG 4 cut(s) 221, 1526, 2095, 2489
SpeI ACTAGT 1 cut(s) 1220
SsiI CCGC 1 cut(s) 43
SspI AATATT 1 cut(s) 826
SstI GAGCTC 2 cut(s) 87, 1313
StyI CCWWGG 3 cut(s) 1304, 1543, 1637
TaiI ACGT 2 cut(s) 1587, 1625
TaqI TCGA 3 cut(s) 222, 321, 540
TatI WGTACW 5 cut(s) 336, 793, 1208, 2157, 2187
TauI GCSGC 1 cut(s) 45
TfiI GAWTC 5 cut(s) 318, 1106, 1439, 1775, 2612
Tru1I TTAA 6 cut(s) 483, 1856, 1950, 2109, 2292, 2490
Tru9I TTAA 6 cut(s) 483, 1856, 1950, 2109, 2292, 2490
TscAI CASTG 7 cut(s) 154, 213, 309, 592, 721, 854, 956
TseFI GTSAC 5 cut(s) 437, 787, 1049, 1869, 2360
TseI GCWGC 2 cut(s) 253, 1912
Tsp45I GTSAC 5 cut(s) 437, 787, 1049, 1869, 2360
TspGWI ACGGA 1 cut(s) 1907
TspRI CASTG 7 cut(s) 154, 213, 309, 592, 721, 854, 956
Van91I CCANNNNNTGG 1 cut(s) 720
Vha464I CTTAAG 1 cut(s) 2489
VneI GTGCAC 1 cut(s) 901
VpaK11BI GGWCC 2 cut(s) 215, 668
XapI RAATTY 5 cut(s) 307, 1000, 1016, 1255, 1452
XbaI TCTAGA 1 cut(s) 2500
XceI RCATGY 4 cut(s) 698, 800, 1410, 2194
XcmI CCANNNNNNNNNTGG 2 cut(s) 942, 2008
XhoI CTCGAG 1 cut(s) 221
XmaJI CCTAGG 1 cut(s) 1543
XmnI GAANNNNTTC 1 cut(s) 2019
ZrmI AGTACT 1 cut(s) 1210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.