Rw7G039420

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000630
Physical Location & Seq
Reverse (-)
60701505 .. 60720098
18594 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G039420.1

Sequence Viewer

Length: 2841 bp
ATGGAGGTTTCCGAAGCCCCTTCCTTTCGGCCAAGAGATCGCCGGCCCGACGCCCTCGGAAACTTCCTAGTCCTCCCCGACGAGCTCATCTGTGTCGTCTTGGAGTTGCTCTCTCCTCGCGACGTTGCTCGCCTCTCCTGCGTTAGCAGTGTGATGTATATACTTTGCAATGAAGAGCCACTCTGGTTGAGTTTATGCCTCAACACACTGAATGGTCCGCTCCAGTACAAAGGATCATGGAAGAAGACGGTGCTGAATTTGGAGAATGTGTCGTATGAATGCGACGAGGCTGGCAGAAAACCACTGAGTTTTGATGGATTTGACTCTTTGTTCTTGCACAGAAGATTATACAGGTGTCATACCACATTACATGGCTTTTCTTTTGACAGTGGGAATGTGGAAAGAAAGGGCAAAAGCACAGTTTTGCTCACTGGATTAGCTGATGCATGGCCTGCAAGGCGTACATGGACACTTGACCACTTATTGCAGAATTATGGAGATACAGCTTTCAAGATTTCTCAAAGAAGCTCACATAAAATCTCAATGACATTCAAGGATTATGTTTCATATATGAAAGTTCAGCATGATGAGGATCCGCTTTATATCTTTGATCACAAGTTTGGAGAGGTTGAACCTGGCTTGTTCAAAGATTACAGTGTACCTTATCTATTTCAAGAGGACTTTTTTGATGTTTTGGACAAAGATAAGCGACCTCCATTTAGATGGCTCATTATTGGTCCCCAGAGGTCTGGTGCTTCTTGGCATGTTGATCCAGCTCTGACCAGTGCCTGGAATACACTTCTATGTGGTCGTAAAAGAGTACCTATAGGTGTCACAGTACATGTAAACGAAGAAGACGGTGATGTCAATATTGAAACTCCAACTTCGTTGCAGTGGTGGCTAGATTTTTATCCACTTCTTGCTGATCAAGACAAGCCCATAGATGGATGGTGGCACTGTGTCCTAAATCTTGAACCATCTATTGCTGTTACCCAGAACTTTGTAAATTCTAAGAACTTTGAATTTGTGTGCTTGGATATGGCACCTGGTTATCGTCATAAGGGAGTTTGCCGTGCTGGCTTACTTGCAGATGATGAAGGCATCGGAACTCTCAAACCTCCAAATATCCAAGTAGTGAAAGAACTAGTAATGGCGCTCAGGCTTTTTCTTATATATGATGTAAATTTCTTAGCCATGTATCTGGATGAAGAGAGAGATCATTACAACTCTCCTTGGAGCTCAGGCAATTGCATAGGGCAACGAGAAATGAGAGAATGGTTATCCAAGCTTTGGGTCGGAAAACCAGGAATGAGAGACTTCATCTGGAAGGTACTTTTCTTATTACCCTATTCTTTAGCTTTCCAAATTGCCTTCCACAAATTGCCTTCTCCAACAGAGGATGAGAGGCTTCCTGTTGGCACGGGTAGCAATCCTGTAAATGATCTGATGTGTCTTTTTCATCTCATGAGCAACTGTGTAATCAAAATTTTTGTTGAGGAAGGACTGGAAACGTCACTTTATGGATTAGGTGCTGAGCTTGAGTTCTACAGTCTCCCAGGCAAAGTCAAATCCCCTCTGAAAAATCACATACCTGACGTTTTGGCAAGTGGGATCATTTATCTTGAAAATGGAACTTATAAAATTGTACCTTGGGATGGCAACGGAGTTCCTGATGTGATTGCTAAGTGCAATTTTATTCCGGAGAAGGTCAAAGGAGATGTTTCTCCTTTTGGTGTATGGAGGAAGAAACAATTTGAATACAGAAAAGCTGGGGTCTCAACAAACGAATCCATCAGTTCAGCTGAATATACAAGGATATGGCCATATCTCATAACAAAACGATGCAAAGGAAAAATATGCAGAGTTCACAAATTGGTCATGGTTTTTATTGAACTTTGCAGAAGAGATACTGTGTCAATGGACGATGAACTGAACTTAGCTTCCTTCCTGGGAGAGCAGCTCCACAACCTCCATCTCTTGCCCCATCCACCTCTTAATATCTCCAGTTTCTCAGATATTGAACAGGAATCAGATTTTCCCTTCACCAACGGTAGGATATATATATTCATTAGAACTCTATCCAAGAAGAAGAAGGATGTCTCAAGTCGCTTGATTAAATGGGGAGATCCAATTCCTAGCACACTCATAGAGAAAGTTGACAAATACATCCCAGATGATTTTGCCAAGTTTCTGTACATATTCAAGGATGAAAATGGTGTAAGCAATGTTGGTAAAAGTTGTTCGTGGATACACTCTGATATCATGGATGACAACATTCACATGGGACTATGTGGTTTTAATTCTTGCGTCATTGGCAATGTCAAAAACACTTGCCTGGTAAAGAATGGTTCCTTGAATGTTGATGGTGACCGTGCAAAGAGGAGAACATGGTGCCCTAGCCACATTCTTGATTTCAGTAATCTTTCTATTCTTGATTTCAGTGATTCCATCTATGATTTGATACCCTTATACTTGGATATATTCAGAGGAGATTGCTGCCTCCTTAAGAGATTTTTAGTTTGTTATAAACTTCCTTTAGTAAGACAAGCATCACCTCATGAGTCTATTGAGGGTGGCAACAAGTTTGGACGACTTTCATACCATGCCATGTGCTACTGTATTCTACATGAAGAGAATGTCCTGGGAGCAATTTTTCGTCTCTGGGACGAACTCAAGATGGCAAAATCATGGGAAGAAGTTGAACAGGTCGTATGGGGCGAGCTAACACTACTACAAAAATCGAAACACACAACACTCATCACACAACATAATAGAAATATGTTGTTGTGTATTAACACTAACTCTGTCAGACAACGGTACAATTCTGTTTCTGTTGTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
APH Cupin_8 F-box F-box-like JmjC

Protein Analysis

946

Amino Acids

108.41

Weight (kDa)

6.34

Isoelectric Point (pI)

39.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 23 - 67 1.2e-06 F-box-like
F-box PF00646 23 - 63 7.6e-06 F-box domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000630)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78280
fragaria_vesca FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800
malus_domestica MD08G1186800.v1.1 MD15G1372700.v1.1
prunus_persica Prupe.1G521300_v2.0.a1 Prupe.1G521300_v2.0.a1
pyrus_communis pycom08g16060 pycom15g33370
rosa_chinensis RchiOBHm_Chr2g0139391 RchiOBHm_Chr7g0242931 RchiOBHm_Chr7g0242951 RchiOBHm_Chr7g0243001 RchiOBHm_Chr7g0243011 RchiOBHm_Chr7g0243141 RchiOBHm_Chr7g0243151 RchiOBHm_Chr7g0243351
rosa_laevigata RLG00000000853 RLG00000000857 RLG00000000858 RLG00000000863 RLG00000000867
rosa_multiflora Rmu_co8457323.1_g000001 Rmu_sc0000083.1_g000017 Rmu_sc0000679.1_g000021 Rmu_sc0001036.1_g000029 Rmu_sc0001036.1_g000032 Rmu_sc0001176.1_g000015 Rmu_sc0001461.1_g000002 Rmu_sc0001461.1_g000003 Rmu_sc0001461.1_g000056 Rmu_sc0001461.1_g000057 Rmu_sc0001461.1_g000098 Rmu_sc0001461.1_g000105 Rmu_sc0004165.1_g000084 Rmu_sc0006141.1_g000004 Rmu_sc0033806.1_g000001
rosa_roxburghii Rroxscaffold_3G00222160 Rroxscaffold_3G00222220 Rroxscaffold_4G00316290
rosa_rugosa Rorug07G0318400 Rorug07G0318400 Rorug07G0318600
rosa_samantha Rh4CG066500 Rh5DG444300 Rh7AG473700 Rh7AG473900 Rh7AG474000 Rh7AG474600 Rh7AG474800 Rh7BG444500 Rh7BG444700 Rh7CG490700 Rh7CG490800 Rh7CG491000 Rh7DG458900 Rh7DG459000 Rh7DG459300
rosa_wichuraiana Rw7G038970 Rw7G039050 Rw7G039420 Rw7G039480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1638, 2526
AasI GACNNNNNNGTC 1 cut(s) 863
AccB1I GGYRCC 2 cut(s) 1042, 2391
AccB7I CCANNNNNTGG 2 cut(s) 789, 1290
AccBSI CCGCTC 1 cut(s) 220
AccII CGCG 1 cut(s) 120
AccIII TCCGGA 1 cut(s) 1699
AciI CCGC 2 cut(s) 218, 596
AclWI GGATC 6 cut(s) 241, 587, 600, 764, 1619, 2120
AcoI YGGCCR 2 cut(s) 29, 1820
AcsI RAATTY 5 cut(s) 256, 1006, 1022, 1183, 1485
AcyI GRCGYC 1 cut(s) 51
AfaI GTAC 9 cut(s) 227, 463, 660, 822, 840, 1332, 1647, 2195, 2819
AfiI CCNNNNNNNGG 5 cut(s) 789, 944, 1290, 1655, 2052
AflII CTTAAG 1 cut(s) 2504
AflIII ACRYGT 1 cut(s) 841
AhlI ACTAGT 1 cut(s) 1144
AjnI CCWGG 8 cut(s) 634, 788, 1045, 1303, 1555, 1947, 2334, 2640
AloI GAACNNNNNNTCC 2 cut(s) 1925, 1957
Alw21I GWGCWC 2 cut(s) 87, 1241
Alw26I GTCTC 5 cut(s) 1308, 1556, 1780, 2104, 2663
AlwI GGATC 6 cut(s) 241, 587, 600, 764, 1619, 2120
AlwNI CAGNNNCTG 1 cut(s) 789
Aor13HI TCCGGA 1 cut(s) 1699
AoxI GGCC 4 cut(s) 29, 44, 449, 1820
ApeKI GCWGC 2 cut(s) 1957, 2496
ApoI RAATTY 5 cut(s) 256, 1006, 1022, 1183, 1485
AspLEI GCGC 1 cut(s) 1156
AspS9I GGNCC 3 cut(s) 45, 215, 737
AsuHPI GGTGA 4 cut(s) 872, 2035, 2378, 2544
AvaII GGWCC 2 cut(s) 215, 737
BaeGI GKGCMC 1 cut(s) 2396
BalI TGGCCA 1 cut(s) 1822
BamHI GGATCC 1 cut(s) 592
BanI GGYRCC 2 cut(s) 1042, 2391
BanII GRGCYC 2 cut(s) 87, 1241
BbsI GAAGAC 2 cut(s) 251, 861
Bbv12I GWGCWC 2 cut(s) 87, 1241
BbvI GCAGC 2 cut(s) 1969, 2483
BceAI ACGGC 1 cut(s) 1056
BciT130I CCWGG 8 cut(s) 636, 790, 1047, 1305, 1557, 1949, 2336, 2642
BciVI GTATCC 1 cut(s) 2241
BclI TGATCA 2 cut(s) 610, 925
BcoDI GTCTC 5 cut(s) 1308, 1556, 1780, 2104, 2663
BcuI ACTAGT 1 cut(s) 1144
BfaI CTAG 5 cut(s) 68, 902, 1145, 2136, 2397
BfmI CTRYAG 2 cut(s) 825, 1546
BfoI RGCGCY 1 cut(s) 1157
BfrI CTTAAG 1 cut(s) 2504
BfuI GTATCC 1 cut(s) 2241
BglI GCCNNNNNGGC 2 cut(s) 457, 1077
BisI GCNGC 2 cut(s) 1958, 2497
BlpI GCTNAGC 1 cut(s) 1533
BlsI GCNGC 2 cut(s) 1959, 2498
Bme1390I CCNGG 8 cut(s) 636, 790, 1047, 1305, 1557, 1949, 2336, 2642
Bme18I GGWCC 2 cut(s) 215, 737
BmgT120I GGNCC 3 cut(s) 45, 215, 737
BmiI GGNNCC 5 cut(s) 594, 739, 1044, 2350, 2393
BmrFI CCNGG 8 cut(s) 636, 790, 1047, 1305, 1557, 1949, 2336, 2642
BmsI GCATC 4 cut(s) 433, 1110, 1832, 2558
BpiI GAAGAC 2 cut(s) 251, 861
BplI GAGNNNNNCTC 4 cut(s) 95, 127, 1944, 1976
BpmI CTGGAG 2 cut(s) 206, 1987
Bpu10I CCTNAGC 2 cut(s) 1157, 1240
Bpu1102I GCTNAGC 1 cut(s) 1533
BpuEI CTTGAG 3 cut(s) 1559, 2086, 2657
BsaBI GATNNNNATC 2 cut(s) 591, 909
BsaHI GRCGYC 1 cut(s) 51
BsaI GGTCTC 1 cut(s) 1780
BsaJI CCNNGG 6 cut(s) 55, 1232, 1555, 1649, 1948, 2641
BsaWI WCCGGW 1 cut(s) 1699
BsaXI ACNNNNNCTCC 2 cut(s) 254, 284
Bsc4I CCNNNNNNNGG 5 cut(s) 789, 944, 1290, 1655, 2052
Bse118I RCCGGY 1 cut(s) 42
Bse1I ACTGG 5 cut(s) 223, 436, 783, 1509, 2004
Bse3DI GCAATG 3 cut(s) 175, 2230, 2323
Bse8I GATNNNNATC 2 cut(s) 591, 909
BseAI TCCGGA 1 cut(s) 1699
BseBI CCWGG 8 cut(s) 636, 790, 1047, 1305, 1557, 1949, 2336, 2642
BseDI CCNNGG 6 cut(s) 55, 1232, 1555, 1649, 1948, 2641
BseGI GGATG 9 cut(s) 953, 1210, 1405, 1660, 1984, 2101, 2166, 2212, 2272
BseJI GATNNNNATC 2 cut(s) 591, 909
BseLI CCNNNNNNNGG 5 cut(s) 789, 944, 1290, 1655, 2052
BseMI GCAATG 3 cut(s) 175, 2230, 2323
BseMII CTCAG 5 cut(s) 296, 1171, 1254, 1524, 2025
BseNI ACTGG 5 cut(s) 223, 436, 783, 1509, 2004
BseRI GAGGAG 3 cut(s) 105, 2395, 2502
BseSI GKGCMC 1 cut(s) 2396
BseXI GCAGC 2 cut(s) 1969, 2483
BseYI CCCAGC 1 cut(s) 1769
Bsh1236I CGCG 1 cut(s) 120
BshFI GGCC 4 cut(s) 31, 46, 451, 1822
BshNI GGYRCC 2 cut(s) 1042, 2391
BsiHKAI GWGCWC 2 cut(s) 87, 1241
BsiSI CCGG 2 cut(s) 43, 1700
BslFI GGGAC 3 cut(s) 723, 2298, 2678
BslI CCNNNNNNNGG 5 cut(s) 789, 944, 1290, 1655, 2052
BsmAI GTCTC 5 cut(s) 1308, 1556, 1780, 2104, 2663
BsmBI CGTCTC 1 cut(s) 2663
BsmFI GGGAC 3 cut(s) 723, 2298, 2678
BsmI GAATGC 1 cut(s) 284
BsnI GGCC 4 cut(s) 31, 46, 451, 1822
Bso31I GGTCTC 1 cut(s) 1780
Bsp1286I GDGCHC 3 cut(s) 87, 1241, 2396
Bsp13I TCCGGA 1 cut(s) 1699
Bsp1407I TGTACA 1 cut(s) 2193
Bsp1720I GCTNAGC 1 cut(s) 1533
Bsp68I TCGCGA 1 cut(s) 120
BspACI CCGC 2 cut(s) 218, 596
BspANI GGCC 4 cut(s) 31, 46, 451, 1822
BspCNI CTCAG 5 cut(s) 297, 1170, 1253, 1525, 2024
BspEI TCCGGA 1 cut(s) 1699
BspFNI CGCG 1 cut(s) 120
BspHI TCATGA 2 cut(s) 1464, 2557
BspLI GGNNCC 5 cut(s) 594, 739, 1044, 2350, 2393
BspPI GGATC 6 cut(s) 241, 587, 600, 764, 1619, 2120
BspQI GCTCTTC 1 cut(s) 168
BspT107I GGYRCC 2 cut(s) 1042, 2391
BspTI CTTAAG 1 cut(s) 2504
BspTNI GGTCTC 1 cut(s) 1780
BsrBI CCGCTC 1 cut(s) 220
BsrDI GCAATG 3 cut(s) 175, 2230, 2323
BsrFI RCCGGY 1 cut(s) 42
BsrGI TGTACA 1 cut(s) 2193
BsrI ACTGG 5 cut(s) 223, 436, 783, 1509, 2004
BssAI RCCGGY 1 cut(s) 42
BssECI CCNNGG 6 cut(s) 55, 1232, 1555, 1649, 1948, 2641
BssNI GRCGYC 1 cut(s) 51
BssT1I CCWWGG 2 cut(s) 1232, 1649
Bst2UI CCWGG 8 cut(s) 636, 790, 1047, 1305, 1557, 1949, 2336, 2642
Bst6I CTCTTC 4 cut(s) 168, 1203, 1897, 2625
BstACI GRCGYC 1 cut(s) 51
BstAFI CTTAAG 1 cut(s) 2504
BstAPI GCANNNNNTGC 1 cut(s) 452
BstAUI TGTACA 1 cut(s) 2193
BstC8I GCNNGC 6 cut(s) 44, 130, 292, 453, 1078, 2720
BstDEI CTNAG 9 cut(s) 305, 1011, 1157, 1189, 1240, 1533, 1683, 1936, 2011
BstEII GGTNACC 1 cut(s) 2366
BstF5I GGATG 9 cut(s) 953, 1210, 1405, 1660, 1984, 2101, 2166, 2212, 2272
BstFNI CGCG 1 cut(s) 120
BstH2I RGCGCY 1 cut(s) 1157
BstHHI GCGC 1 cut(s) 1156
BstMAI GTCTC 5 cut(s) 1308, 1556, 1780, 2104, 2663
BstMWI GCNNNNNNNGC 7 cut(s) 138, 452, 457, 898, 1077, 1425, 2313
BstNI CCWGG 8 cut(s) 636, 790, 1047, 1305, 1557, 1949, 2336, 2642
BstNSI RCATGY 2 cut(s) 767, 845
BstPI GGTNACC 1 cut(s) 2366
BstSCI CCNGG 8 cut(s) 634, 788, 1045, 1303, 1555, 1947, 2334, 2640
BstSFI CTRYAG 2 cut(s) 825, 1546
BstSLI GKGCMC 1 cut(s) 2396
BstUI CGCG 1 cut(s) 120
BstV1I GCAGC 2 cut(s) 1969, 2483
BstV2I GAAGAC 2 cut(s) 251, 861
BstX2I RGATCY 2 cut(s) 592, 2125
BstXI CCANNNNNNTGG 3 cut(s) 723, 749, 1201
BstYI RGATCY 2 cut(s) 592, 2125
BsuI GTATCC 1 cut(s) 2241
BsuRI GGCC 4 cut(s) 31, 46, 451, 1822
BtsCI GGATG 9 cut(s) 953, 1210, 1405, 1660, 1984, 2101, 2166, 2212, 2272
BtsI GCAGTG 2 cut(s) 154, 899
BtuMI TCGCGA 1 cut(s) 120
Cac8I GCNNGC 6 cut(s) 44, 130, 292, 453, 1078, 2720
CaiI CAGNNNCTG 1 cut(s) 789
CciI TCATGA 2 cut(s) 1464, 2557
CfoI GCGC 1 cut(s) 1156
Cfr10I RCCGGY 1 cut(s) 42
Cfr13I GGNCC 3 cut(s) 45, 215, 737
CseI GACGC 2 cut(s) 59, 2296
CsiI ACCWGGT 1 cut(s) 1045
Csp6I GTAC 9 cut(s) 226, 462, 659, 821, 839, 1331, 1646, 2194, 2818
CspCI CAANNNNNGTGG 2 cut(s) 168, 203
CviQI GTAC 9 cut(s) 226, 462, 659, 821, 839, 1331, 1646, 2194, 2818
DdeI CTNAG 9 cut(s) 305, 1011, 1157, 1189, 1240, 1533, 1683, 1936, 2011
DrdI GACNNNNNNGTC 1 cut(s) 863
DseDI GACNNNNNNGTC 1 cut(s) 863
EaeI YGGCCR 2 cut(s) 29, 1820
Eam1104I CTCTTC 4 cut(s) 168, 1203, 1897, 2625
EarI CTCTTC 4 cut(s) 168, 1203, 1897, 2625
Ecl136II GAGCTC 2 cut(s) 85, 1239
Eco130I CCWWGG 2 cut(s) 1232, 1649
Eco24I GRGCYC 2 cut(s) 87, 1241
Eco31I GGTCTC 1 cut(s) 1780
Eco32I GATATC 1 cut(s) 2260
Eco47I GGWCC 2 cut(s) 215, 737
Eco53kI GAGCTC 2 cut(s) 85, 1239
Eco91I GGTNACC 1 cut(s) 2366
EcoICRI GAGCTC 2 cut(s) 85, 1239
EcoO65I GGTNACC 1 cut(s) 2366
EcoRII CCWGG 8 cut(s) 634, 788, 1045, 1303, 1555, 1947, 2334, 2640
EcoRV GATATC 1 cut(s) 2260
EcoT14I CCWWGG 2 cut(s) 1232, 1649
EcoT22I ATGCAT 1 cut(s) 448
EcoT38I GRGCYC 2 cut(s) 87, 1241
ErhI CCWWGG 2 cut(s) 1232, 1649
Esp3I CGTCTC 1 cut(s) 2663
FaqI GGGAC 3 cut(s) 723, 2298, 2678
FbaI TGATCA 2 cut(s) 610, 925
Fnu4HI GCNGC 2 cut(s) 1958, 2497
FokI GGATG 9 cut(s) 960, 1217, 1412, 1667, 1971, 2108, 2153, 2219, 2279
FriOI GRGCYC 2 cut(s) 87, 1241
Fsp4HI GCNGC 2 cut(s) 1958, 2497
FspBI CTAG 5 cut(s) 68, 902, 1145, 2136, 2397
GlaI GCGC 1 cut(s) 1155
GluI GCNGC 2 cut(s) 1958, 2497
GsaI CCCAGC 1 cut(s) 1773
GsuI CTGGAG 2 cut(s) 206, 1987
HaeII RGCGCY 1 cut(s) 1157
HaeIII GGCC 4 cut(s) 31, 46, 451, 1822
HapII CCGG 2 cut(s) 43, 1700
HgaI GACGC 2 cut(s) 59, 2296
HhaI GCGC 1 cut(s) 1156
Hin1I GRCGYC 1 cut(s) 51
Hin6I GCGC 1 cut(s) 1154
HinP1I GCGC 1 cut(s) 1154
HincII GTYRAC 1 cut(s) 2158
HindII GTYRAC 1 cut(s) 2158
HindIII AAGCTT 1 cut(s) 1286
HinfI GANTC 5 cut(s) 323, 1787, 2027, 2444, 2561
HpaII CCGG 2 cut(s) 43, 1700
HphI GGTGA 4 cut(s) 872, 2035, 2378, 2544
Hpy166II GTNNAC 4 cut(s) 659, 847, 1867, 2158
Hpy8I GTNNAC 4 cut(s) 659, 847, 1867, 2158
Hpy99I CGWCG 4 cut(s) 53, 83, 125, 287
HpyCH4IV ACGT 3 cut(s) 123, 1511, 1596
HpyF10VI GCNNNNNNNGC 7 cut(s) 138, 452, 457, 898, 1077, 1425, 2313
HpyF3I CTNAG 9 cut(s) 305, 1011, 1157, 1189, 1240, 1533, 1683, 1936, 2011
HpySE526I ACGT 3 cut(s) 123, 1511, 1596
Hsp92I GRCGYC 1 cut(s) 51
HspAI GCGC 1 cut(s) 1154
Kpn2I TCCGGA 1 cut(s) 1699
KroI GCCGGC 1 cut(s) 42
KroNI GCCGGC 1 cut(s) 44
Ksp22I TGATCA 2 cut(s) 610, 925
LguI GCTCTTC 1 cut(s) 168
LmnI GCTCC 4 cut(s) 225, 1236, 1965, 2645
Lsp1109I GCAGC 2 cut(s) 1969, 2483
LweI GCATC 4 cut(s) 433, 1110, 1832, 2558
MabI ACCWGGT 1 cut(s) 1045
MaeI CTAG 5 cut(s) 68, 902, 1145, 2136, 2397
MaeII ACGT 3 cut(s) 123, 1511, 1596
MaeIII GTNAC 4 cut(s) 832, 988, 1512, 2366
MbiI CCGCTC 1 cut(s) 220
MfeI CAATTG 1 cut(s) 1246
MflI RGATCY 2 cut(s) 592, 2125
MhlI GDGCHC 3 cut(s) 87, 1241, 2396
MlsI TGGCCA 1 cut(s) 1822
MluNI TGGCCA 1 cut(s) 1822
MlyI GAGTC 2 cut(s) 317, 2570
MmeI TCCRAC 3 cut(s) 905, 1276, 1415
Mox20I TGGCCA 1 cut(s) 1822
Mph1103I ATGCAT 1 cut(s) 448
MroI TCCGGA 1 cut(s) 1699
MroNI GCCGGC 1 cut(s) 42
MscI TGGCCA 1 cut(s) 1822
MseI TTAA 5 cut(s) 1995, 2115, 2298, 2505, 2793
MslI CAYNNNNRTG 3 cut(s) 721, 802, 2279
Msp20I TGGCCA 1 cut(s) 1822
MspA1I CMGCKG 1 cut(s) 1802
MspCI CTTAAG 1 cut(s) 2504
MspI CCGG 2 cut(s) 43, 1700
MspR9I CCNGG 8 cut(s) 636, 790, 1047, 1305, 1557, 1949, 2336, 2642
MunI CAATTG 1 cut(s) 1246
Mva1269I GAATGC 1 cut(s) 284
MvaI CCWGG 8 cut(s) 636, 790, 1047, 1305, 1557, 1949, 2336, 2642
MvnI CGCG 1 cut(s) 120
MwoI GCNNNNNNNGC 7 cut(s) 138, 452, 457, 898, 1077, 1425, 2313
NaeI GCCGGC 1 cut(s) 44
NgoMIV GCCGGC 1 cut(s) 42
NlaIV GGNNCC 5 cut(s) 594, 739, 1044, 2350, 2393
NmuCI GTSAC 3 cut(s) 832, 1512, 2366
NruI TCGCGA 1 cut(s) 120
NsiI ATGCAT 1 cut(s) 448
NspI RCATGY 2 cut(s) 767, 845
PagI TCATGA 2 cut(s) 1464, 2557
PciI ACATGT 1 cut(s) 841
PciSI GCTCTTC 1 cut(s) 168
PcsI WCGNNNNNNNCGW 1 cut(s) 2715
PctI GAATGC 1 cut(s) 284
PdiI GCCGGC 1 cut(s) 44
PfeI GAWTC 3 cut(s) 1787, 2027, 2444
PflMI CCANNNNNTGG 2 cut(s) 789, 1290
PkrI GCNGC 2 cut(s) 1959, 2498
PleI GAGTC 2 cut(s) 317, 2569
PpsI GAGTC 2 cut(s) 317, 2569
PscI ACATGT 1 cut(s) 841
PsiI TTATAA 2 cut(s) 1638, 2526
Psp124BI GAGCTC 2 cut(s) 87, 1241
Psp6I CCWGG 8 cut(s) 634, 788, 1045, 1303, 1555, 1947, 2334, 2640
PspEI GGTNACC 1 cut(s) 2366
PspFI CCCAGC 1 cut(s) 1769
PspGI CCWGG 8 cut(s) 634, 788, 1045, 1303, 1555, 1947, 2334, 2640
PspN4I GGNNCC 5 cut(s) 594, 739, 1044, 2350, 2393
PspPI GGNCC 3 cut(s) 45, 215, 737
PsrI GAACNNNNNNTAC 2 cut(s) 2224, 2256
PstNI CAGNNNCTG 1 cut(s) 789
PsuI RGATCY 2 cut(s) 592, 2125
PvuII CAGCTG 1 cut(s) 1802
RruI TCGCGA 1 cut(s) 120
RsaI GTAC 9 cut(s) 227, 463, 660, 822, 840, 1332, 1647, 2195, 2819
RsaNI GTAC 9 cut(s) 226, 462, 659, 821, 839, 1331, 1646, 2194, 2818
RseI CAYNNNNRTG 3 cut(s) 721, 802, 2279
SacI GAGCTC 2 cut(s) 87, 1241
SapI GCTCTTC 1 cut(s) 168
SaqAI TTAA 5 cut(s) 1995, 2115, 2298, 2505, 2793
SatI GCNGC 2 cut(s) 1958, 2497
Sau96I GGNCC 3 cut(s) 45, 215, 737
SchI GAGTC 2 cut(s) 317, 2570
ScrFI CCNGG 8 cut(s) 636, 790, 1047, 1305, 1557, 1949, 2336, 2642
SduI GDGCHC 3 cut(s) 87, 1241, 2396
SexAI ACCWGGT 1 cut(s) 1045
SfaNI GCATC 4 cut(s) 433, 1110, 1832, 2558
SfcI CTRYAG 2 cut(s) 825, 1546
SinI GGWCC 2 cut(s) 215, 737
SmiMI CAYNNNNRTG 3 cut(s) 721, 802, 2279
SmlI CTYRAG 4 cut(s) 1538, 2101, 2504, 2672
SmoI CTYRAG 4 cut(s) 1538, 2101, 2504, 2672
SpeI ACTAGT 1 cut(s) 1144
SsiI CCGC 2 cut(s) 218, 596
SspI AATATT 1 cut(s) 871
SspMI CTAG 5 cut(s) 68, 902, 1145, 2136, 2397
SstI GAGCTC 2 cut(s) 87, 1241
StyD4I CCNGG 8 cut(s) 634, 788, 1045, 1303, 1555, 1947, 2334, 2640
StyI CCWWGG 2 cut(s) 1232, 1649
TaiI ACGT 3 cut(s) 126, 1514, 1599
TaqI TCGA 1 cut(s) 2741
TatI WGTACW 3 cut(s) 225, 838, 2193
TfiI GAWTC 3 cut(s) 1787, 2027, 2444
Tru1I TTAA 5 cut(s) 1995, 2115, 2298, 2505, 2793
Tru9I TTAA 5 cut(s) 1995, 2115, 2298, 2505, 2793
TseFI GTSAC 3 cut(s) 832, 1512, 2366
TseI GCWGC 2 cut(s) 1957, 2496
Tsp45I GTSAC 3 cut(s) 832, 1512, 2366
TspGWI ACGGA 1 cut(s) 1677
Van91I CCANNNNNTGG 2 cut(s) 789, 1290
Vha464I CTTAAG 1 cut(s) 2504
VpaK11BI GGWCC 2 cut(s) 215, 737
XapI RAATTY 5 cut(s) 256, 1006, 1022, 1183, 1485
XceI RCATGY 2 cut(s) 767, 845
XspI CTAG 5 cut(s) 68, 902, 1145, 2136, 2397
Zsp2I ATGCAT 1 cut(s) 448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.