Prupe.1G521300_v2.0.a1

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000630
Physical Location & Seq
Forward (+)
42752705 .. 42762082
9378 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G521300.2

Sequence Viewer

Length: 3006 bp
ATGGAGAATTCTGAAGCCCATGCGTTGGGTCTCAGAGATCGCAGGCCGGATGCTCTCGGAAACTTCCGAGCCCTCCCTGACGACCTCATCTGTGACATCTTGGAATACCTGACCCCTCGCGACGTTGCTCGTCTCGCTTCCGTTAGCAGTGTGATGTACATACTATGCAATGAAGAGCCGCTTTGGATGAGTATATGCCTTAGCAGACTAGATGGTCCACTTCAGTATAAAGGTTCCTGGAAAAAGACGGCACTGCATTTAGAGCATGTACCATATGAATGTGATGAGGCTTGCAGAAAACCACTTAATTTTGATGGATTCAACTCGTTGTTCTTGTACAGAAGATTTTACAGGTGCCATACCACATTAGATAGTTTTTCTTTTGACGATGGGAATGTGGAAAGAAAGAAAAACCCCACTTTGGAAGAGTTTTCTCGTGACTATGATGGGAGGAAACCGGTTTTACTCACTGGATTGGCTGATGCTTGGCCTGCAAGGTGTACATGGACATTTGACCAGTTATTGCAGAATTATGGAGATATAGCTTTCAAGATTTCGCAAAGGAGTGCACGCAAAGTCTCAATGAAATTCAAAGATTATGTTGCATACTTGAAGATTCAGCATGATGAGGATCCCCTGTATATTTTCGATCACAAGTTTGGAGAGGTTGTTCCGGCCCTGTTGAAAGATTACAGTATACCTGATCTATTTCAAGAGGACTTTTTTGATGTTTTAGATAGAGAGAAGCGACCTCCATTTAGATGGCTCATTATTGGGCCACAGAGGTCTGGTGCCTCTTGGCATGTTGATCCGGCTCTTACCAGTGCCTGGAATACGCTACTAGTCGGACGTAAGAGGTGGGCCCTGTATCCTCCAGGAAAGGTACCTCTAGGTGTCACAGTACATGTAAACGAAGAAGATGGTGATGTCAATATTGAAACTCCATCTTCACTGCAGTGGTGGCTAGATTTTTATCCACTTCTTGCTGATGAAGACAAGCCAATAGAGTGTACCCAACTGCCAGGGGAAACAATTTTCGTTCCAAGTGGATGGTGGCACTGCGTCCTAAATCTGGAACCAAGTATTGCTGTTACTCAGAACTTTGTCAATCCCAAAAACTTTGAGTTTGTGTGTTTGGATATGACACCTGGGTATCGTCATAAGGGAGTTTGCCGTGCTGGATTACTTGCACATGAAAAAGGCAATTATGAGGATGCCACAGATAATATACTATATGATAGAGATGATTCTAGTTTCTCAGATCTGACTAGGAAAGAGAAAAGAGTCAGAACTCTCGAACCTGTAGAAAATCAAAGAAGTGGAAGTATGAGGAATGGTGCCTATAATGACCATAATTTACAACAAAAAAGTTACCAGGGTTTTTCTTATGATGTCAATTTCTTAGCCATGTATCTGGACAAAGAGAGAGATCACTACAACTCTCCTTGGAGCTCAGGCAATTGCATAGGGCAACGAGAAATGAGGGAATGGTTATTTAAGCTTTGGTTGGGAAAACCAGGAATGAGAGACTTAATCTGGAAGGGAGCTTGTCTTGCACTAAATGCGGAGAGATGGTTAGAATGCCTCACAGAAGTTTGTGCATACCATAATTTGCCTTCTCCAACAGAAGATGAAAGGCTTCCTGTTGGCACGGGCAGCAATCCTGTTTATCTCTTGACCAACTATGTAGTCAAAATTTTTGTTGAGGAAGGGCTGGAAACCTCGCTTTATGGTTTAGGCACTGAGCTTGAATTTCACAATCTCCTATGCAACTTCAACTCCCCTCTGAAAAATCACATACCTGATGTTTTGGCAAGTGGGATCATTTATCTTGAACATGGAATTTATAGAATTGTACCTTGGGATGGCAACAGAGTTCCTGATGTGATTGCTAAGTGCAATATTATTCCTGAGAAGTTCAAATCAGATGTTTTTCCTTTTGGTGTATGGAGTAAGAAACAATTTGAATGCAGAAAAGCATTATATGAACCCATCAGTGCGACTAAAGGCACACGGATATGGCCATATCTTATAACAAAACGGTGCAAAGGGAAAATATATGCAGAGTTAAGAGATACCATGCCATTTGAAGACACACTGAACTTAGCATCCTTTCTGGGAGAGCAGCTCTGTAACCTCCATCTCCTGCCCCTTCCACCTCTCAGCATCTCAAATGTCTCAGATGTTGAACAGGAAATAGATCTGCCCTTGACTAACGGTTGTATGGAGGCTGTTCCTGATAAACCAGAAATTCCAGCTGAATGGAATATTTTCATCAGAACTCTAATCAGGAAGAAGAAGGATCTCTCAGGTCGCTTGAGTAAATGGGGAGATCCAATTCCTAGCACACTAATAGAGAAAGTCAATGAATACATCCCAGATGATTTTTACAAGTTGCTTTACATATTTGAGGATGAAAATGGCTTAAACAAAGTCGGTAAACTTTGTTCCTGGATACACTCGGATATCATGGATGACAATGTTCACATGGAACCATGTGGTGTTCATTCTTGCTTGATTGGGAACACCAACGGCACTGACCTGGTAAATAATGGTTTGGTGAATGTCAATGGCTGCAGTGCAGGGAGTAAATCATGGCGTCCTAACCACATTCTTGATTTCAGCGATCTTTCTATAGGTGACCCCATTTATGATTTGATACCCATATACTTGGATATATTTAGAGGTGATCGCTCTCTCCTTGAGCAATTTTTAAAAAGCTATAAACTTCCTCTAGTGAGAGGAGTGTCACAGAATGAGTCTGTTAAGGGTGGCGATAAGTTTGGACGGCTTTCCTACCATGCCATGTGCTACTGTATTTTGCATGACGACAACGTCTTGGGAGCTATTTTTAGTCTCTGGGACGAACTCAAGACGGCGAAGACATGGGAAGAAGTTGAGCAGGTAGTATGGGAAGAGTTGAATAATTACAAAGGTTTCCCTGGATCATCTTCATCTTCTGCATTTCTCTCTTCGTTGGAGCCTAAAACTTCCACAATATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
APH Cupin_8 F-box F-box-like JmjC

Protein Analysis

1002

Amino Acids

114.67

Weight (kDa)

5.33

Isoelectric Point (pI)

43.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000630)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78280
fragaria_vesca FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800
malus_domestica MD08G1186800.v1.1 MD15G1372700.v1.1
prunus_persica Prupe.1G521300_v2.0.a1 Prupe.1G521300_v2.0.a1
pyrus_communis pycom08g16060 pycom15g33370
rosa_chinensis RchiOBHm_Chr2g0139391 RchiOBHm_Chr7g0242931 RchiOBHm_Chr7g0242951 RchiOBHm_Chr7g0243001 RchiOBHm_Chr7g0243011 RchiOBHm_Chr7g0243141 RchiOBHm_Chr7g0243151 RchiOBHm_Chr7g0243351
rosa_laevigata RLG00000000853 RLG00000000857 RLG00000000858 RLG00000000863 RLG00000000867
rosa_multiflora Rmu_co8457323.1_g000001 Rmu_sc0000083.1_g000017 Rmu_sc0000679.1_g000021 Rmu_sc0001036.1_g000029 Rmu_sc0001036.1_g000032 Rmu_sc0001176.1_g000015 Rmu_sc0001461.1_g000002 Rmu_sc0001461.1_g000003 Rmu_sc0001461.1_g000056 Rmu_sc0001461.1_g000057 Rmu_sc0001461.1_g000098 Rmu_sc0001461.1_g000105 Rmu_sc0004165.1_g000084 Rmu_sc0006141.1_g000004 Rmu_sc0033806.1_g000001
rosa_roxburghii Rroxscaffold_3G00222160 Rroxscaffold_3G00222220 Rroxscaffold_4G00316290
rosa_rugosa Rorug07G0318400 Rorug07G0318400 Rorug07G0318600
rosa_samantha Rh4CG066500 Rh5DG444300 Rh7AG473700 Rh7AG473900 Rh7AG474000 Rh7AG474600 Rh7AG474800 Rh7BG444500 Rh7BG444700 Rh7CG490700 Rh7CG490800 Rh7CG491000 Rh7DG458900 Rh7DG459000 Rh7DG459300
rosa_wichuraiana Rw7G038970 Rw7G039050 Rw7G039420 Rw7G039480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2033
AasI GACNNNNNNGTC 2 cut(s) 213, 2834
Acc36I ACCTGC 1 cut(s) 2893
Acc65I GGTACC 1 cut(s) 883
AccB1I GGYRCC 4 cut(s) 354, 791, 883, 1337
AccB7I CCANNNNNTGG 2 cut(s) 25, 828
AccI GTMKAC 1 cut(s) 697
AccII CGCG 1 cut(s) 120
AciI CCGC 2 cut(s) 179, 1565
AclWI GGATC 7 cut(s) 626, 639, 803, 1829, 2310, 2327, 2953
AcoI YGGCCR 1 cut(s) 2021
AcsI RAATTY 6 cut(s) 7, 587, 1695, 1751, 1842, 2250
AcuI CTGAAG 2 cut(s) 33, 206
AcyI GRCGYC 1 cut(s) 2599
AfaI GTAC 8 cut(s) 158, 270, 338, 502, 885, 903, 1012, 1857
AfiI CCNNNNNNNGG 5 cut(s) 25, 421, 828, 1072, 1865
AflIII ACRYGT 1 cut(s) 904
AgeI ACCGGT 1 cut(s) 457
AhlI ACTAGT 1 cut(s) 841
AjuI GAANNNNNNNTTGG 2 cut(s) 1843, 1875
AleI CACNNNNGTG 1 cut(s) 955
AloI GAACNNNNNNTCC 4 cut(s) 654, 686, 2093, 2125
AluBI AGCT 9 cut(s) 545, 1452, 1501, 1547, 1747, 2128, 2258, 2721, 2846
AluI AGCT 9 cut(s) 545, 1452, 1501, 1547, 1747, 2128, 2258, 2721, 2846
Alw21I GWGCWC 2 cut(s) 571, 1454
Alw26I GTCTC 6 cut(s) 35, 137, 583, 1521, 2182, 2861
Alw44I GTGCAC 1 cut(s) 567
AlwI GGATC 7 cut(s) 626, 639, 803, 1829, 2310, 2327, 2953
AlwNI CAGNNNCTG 1 cut(s) 828
AoxI GGCC 6 cut(s) 44, 488, 675, 776, 861, 2021
ApaI GGGCCC 1 cut(s) 865
ApaLI GTGCAC 1 cut(s) 567
ApeKI GCWGC 3 cut(s) 1656, 2125, 2574
ApoI RAATTY 6 cut(s) 7, 587, 1695, 1751, 1842, 2250
AsiGI ACCGGT 1 cut(s) 457
Asp700I GAANNNNTTC 2 cut(s) 1638, 2270
Asp718I GGTACC 1 cut(s) 883
AspS9I GGNCC 5 cut(s) 215, 676, 776, 861, 862
AsuHPI GGTGA 4 cut(s) 935, 2572, 2651, 2699
AvaII GGWCC 1 cut(s) 215
BaeGI GKGCMC 2 cut(s) 571, 865
BaeI ACNNNNGTAYC 2 cut(s) 1136, 1169
BalI TGGCCA 1 cut(s) 2023
BamHI GGATCC 1 cut(s) 631
BanI GGYRCC 4 cut(s) 354, 791, 883, 1337
BanII GRGCYC 3 cut(s) 73, 865, 1454
BauI CACGAG 1 cut(s) 435
BbsI GAAGAC 3 cut(s) 999, 2097, 2888
Bbv12I GWGCWC 2 cut(s) 571, 1454
BbvI GCAGC 3 cut(s) 1668, 2137, 2561
BceAI ACGGC 5 cut(s) 264, 1158, 2548, 2804, 2892
BciVI GTATCC 2 cut(s) 879, 2448
BcoDI GTCTC 6 cut(s) 35, 137, 583, 1521, 2182, 2861
BcuI ACTAGT 1 cut(s) 841
BfaI CTAG 8 cut(s) 209, 842, 890, 965, 1251, 1269, 2343, 2735
BfmI CTRYAG 4 cut(s) 953, 1302, 2575, 2634
BfuAI ACCTGC 1 cut(s) 2893
BfuI GTATCC 2 cut(s) 879, 2448
BglII AGATCT 2 cut(s) 1261, 2200
BisI GCNGC 4 cut(s) 179, 1657, 2126, 2575
BlsI GCNGC 4 cut(s) 180, 1658, 2127, 2576
Bme18I GGWCC 1 cut(s) 215
BmgT120I GGNCC 5 cut(s) 215, 676, 776, 861, 862
BmsI GCATC 5 cut(s) 40, 472, 1204, 2117, 2175
BpiI GAAGAC 3 cut(s) 999, 2097, 2888
BplI GAGNNNNNCTC 2 cut(s) 2112, 2144
BpmI CTGGAG 1 cut(s) 858
Bpu10I CCTNAGC 2 cut(s) 200, 1453
BpuEI CTTGAG 3 cut(s) 2338, 2723, 2855
BsaBI GATNNNNATC 2 cut(s) 630, 972
BsaHI GRCGYC 1 cut(s) 2599
BsaI GGTCTC 1 cut(s) 35
BsaJI CCNNGG 6 cut(s) 1022, 1148, 1375, 1445, 1859, 2941
BsaWI WCCGGW 1 cut(s) 457
BsaXI ACNNNNNCTCC 6 cut(s) 654, 684, 1559, 1589, 1763, 1793
Bsc4I CCNNNNNNNGG 5 cut(s) 25, 421, 828, 1072, 1865
Bse118I RCCGGY 1 cut(s) 457
Bse1I ACTGG 3 cut(s) 475, 517, 822
Bse3DI GCAATG 1 cut(s) 175
Bse8I GATNNNNATC 2 cut(s) 630, 972
BseDI CCNNGG 6 cut(s) 1022, 1148, 1375, 1445, 1859, 2941
BseGI GGATG 9 cut(s) 55, 192, 1055, 1219, 1870, 2108, 2373, 2419, 2479
BseJI GATNNNNATC 2 cut(s) 630, 972
BseLI CCNNNNNNNGG 5 cut(s) 25, 421, 828, 1072, 1865
BseMI GCAATG 1 cut(s) 175
BseMII CTCAG 9 cut(s) 46, 1109, 1272, 1467, 1734, 1902, 2176, 2193, 2322
BseNI ACTGG 3 cut(s) 475, 517, 822
BseRI GAGGAG 1 cut(s) 2757
BseSI GKGCMC 2 cut(s) 571, 865
BseXI GCAGC 3 cut(s) 1668, 2137, 2561
BsgI GTGCAG 1 cut(s) 2601
Bsh1236I CGCG 1 cut(s) 120
BshFI GGCC 6 cut(s) 46, 490, 677, 778, 863, 2023
BshNI GGYRCC 4 cut(s) 354, 791, 883, 1337
BshTI ACCGGT 1 cut(s) 457
BsiHKAI GWGCWC 2 cut(s) 571, 1454
BsiSI CCGG 4 cut(s) 47, 458, 674, 812
BslFI GGGAC 1 cut(s) 2876
BslI CCNNNNNNNGG 5 cut(s) 25, 421, 828, 1072, 1865
BsmAI GTCTC 6 cut(s) 35, 137, 583, 1521, 2182, 2861
BsmBI CGTCTC 1 cut(s) 137
BsmFI GGGAC 1 cut(s) 2876
BsmI GAATGC 2 cut(s) 1586, 1973
BsnI GGCC 6 cut(s) 46, 490, 677, 778, 863, 2023
Bso31I GGTCTC 1 cut(s) 35
Bsp120I GGGCCC 1 cut(s) 861
Bsp1286I GDGCHC 4 cut(s) 73, 571, 865, 1454
Bsp1407I TGTACA 3 cut(s) 156, 336, 500
Bsp68I TCGCGA 1 cut(s) 120
BspACI CCGC 2 cut(s) 179, 1565
BspANI GGCC 6 cut(s) 46, 490, 677, 778, 863, 2023
BspCNI CTCAG 9 cut(s) 45, 1108, 1271, 1466, 1735, 1903, 2175, 2192, 2321
BspFNI CGCG 1 cut(s) 120
BspMAI CTGCAG 2 cut(s) 957, 2579
BspMI ACCTGC 1 cut(s) 2893
BspPI GGATC 7 cut(s) 626, 639, 803, 1829, 2310, 2327, 2953
BspQI GCTCTTC 1 cut(s) 168
BspT107I GGYRCC 4 cut(s) 354, 791, 883, 1337
BspTNI GGTCTC 1 cut(s) 35
BsrDI GCAATG 1 cut(s) 175
BsrFI RCCGGY 1 cut(s) 457
BsrGI TGTACA 3 cut(s) 156, 336, 500
BsrI ACTGG 3 cut(s) 475, 517, 822
BssAI RCCGGY 1 cut(s) 457
BssECI CCNNGG 6 cut(s) 1022, 1148, 1375, 1445, 1859, 2941
BssNAI GTATAC 1 cut(s) 698
BssNI GRCGYC 1 cut(s) 2599
BssSI CACGAG 1 cut(s) 435
BssT1I CCWWGG 2 cut(s) 1445, 1859
Bst1107I GTATAC 1 cut(s) 698
Bst2BI CACGAG 1 cut(s) 435
Bst4CI ACNGT 5 cut(s) 695, 901, 2043, 2219, 2816
Bst6I CTCTTC 4 cut(s) 168, 420, 2910, 2977
BstACI GRCGYC 1 cut(s) 2599
BstAPI GCANNNNNTGC 1 cut(s) 1562
BstAUI TGTACA 3 cut(s) 156, 336, 500
BstC8I GCNNGC 4 cut(s) 44, 292, 492, 571
BstEII GGTNACC 1 cut(s) 2639
BstF5I GGATG 9 cut(s) 55, 192, 1055, 1219, 1870, 2108, 2373, 2419, 2479
BstFNI CGCG 1 cut(s) 120
BstMAI GTCTC 6 cut(s) 35, 137, 583, 1521, 2182, 2861
BstMWI GCNNNNNNNGC 7 cut(s) 134, 262, 491, 961, 1553, 1562, 1656
BstNSI RCATGY 3 cut(s) 269, 806, 908
BstPI GGTNACC 1 cut(s) 2639
BstSFI CTRYAG 4 cut(s) 953, 1302, 2575, 2634
BstSLI GKGCMC 2 cut(s) 571, 865
BstUI CGCG 1 cut(s) 120
BstV1I GCAGC 3 cut(s) 1668, 2137, 2561
BstV2I GAAGAC 3 cut(s) 999, 2097, 2888
BstX2I RGATCY 5 cut(s) 631, 1261, 2200, 2302, 2332
BstXI CCANNNNNNTGG 5 cut(s) 762, 1050, 1414, 2262, 2671
BstYI RGATCY 5 cut(s) 631, 1261, 2200, 2302, 2332
BstZ17I GTATAC 1 cut(s) 698
BsuI GTATCC 2 cut(s) 879, 2448
BsuRI GGCC 6 cut(s) 46, 490, 677, 778, 863, 2023
BtsCI GGATG 9 cut(s) 55, 192, 1055, 1219, 1870, 2108, 2373, 2419, 2479
BtsI GCAGTG 6 cut(s) 154, 251, 950, 962, 1057, 2584
BtuMI TCGCGA 1 cut(s) 120
BveI ACCTGC 1 cut(s) 2893
Cac8I GCNNGC 4 cut(s) 44, 292, 492, 571
CaiI CAGNNNCTG 1 cut(s) 828
Cfr10I RCCGGY 1 cut(s) 457
Cfr13I GGNCC 5 cut(s) 215, 676, 776, 861, 862
CseI GACGC 2 cut(s) 1051, 2588
CsiI ACCWGGT 1 cut(s) 2541
Csp6I GTAC 8 cut(s) 157, 269, 337, 501, 884, 902, 1011, 1856
CspAI ACCGGT 1 cut(s) 457
CviQI GTAC 8 cut(s) 157, 269, 337, 501, 884, 902, 1011, 1856
DraI TTTAAA 1 cut(s) 2715
DrdI GACNNNNNNGTC 2 cut(s) 213, 2834
DseDI GACNNNNNNGTC 2 cut(s) 213, 2834
EaeI YGGCCR 1 cut(s) 2021
Eam1104I CTCTTC 4 cut(s) 168, 420, 2910, 2977
EarI CTCTTC 4 cut(s) 168, 420, 2910, 2977
Ecl136II GAGCTC 1 cut(s) 1452
Eco130I CCWWGG 2 cut(s) 1445, 1859
Eco24I GRGCYC 3 cut(s) 73, 865, 1454
Eco31I GGTCTC 1 cut(s) 35
Eco32I GATATC 1 cut(s) 2467
Eco47I GGWCC 1 cut(s) 215
Eco53kI GAGCTC 1 cut(s) 1452
Eco57I CTGAAG 2 cut(s) 33, 206
Eco91I GGTNACC 1 cut(s) 2639
EcoICRI GAGCTC 1 cut(s) 1452
EcoO109I RGGNCCY 1 cut(s) 862
EcoO65I GGTNACC 1 cut(s) 2639
EcoRI GAATTC 1 cut(s) 7
EcoRV GATATC 1 cut(s) 2467
EcoT14I CCWWGG 2 cut(s) 1445, 1859
EcoT38I GRGCYC 3 cut(s) 73, 865, 1454
ErhI CCWWGG 2 cut(s) 1445, 1859
Esp3I CGTCTC 1 cut(s) 137
FalI AAGNNNNNCTT 2 cut(s) 165, 197
FaqI GGGAC 1 cut(s) 2876
FauNDI CATATG 1 cut(s) 274
FblI GTMKAC 1 cut(s) 697
Fnu4HI GCNGC 4 cut(s) 179, 1657, 2126, 2575
FokI GGATG 9 cut(s) 62, 199, 1062, 1226, 1877, 2095, 2360, 2426, 2486
FriOI GRGCYC 3 cut(s) 73, 865, 1454
Fsp4HI GCNGC 4 cut(s) 179, 1657, 2126, 2575
FspBI CTAG 8 cut(s) 209, 842, 890, 965, 1251, 1269, 2343, 2735
GluI GCNGC 4 cut(s) 179, 1657, 2126, 2575
GsuI CTGGAG 1 cut(s) 858
HaeIII GGCC 6 cut(s) 46, 490, 677, 778, 863, 2023
HapII CCGG 4 cut(s) 47, 458, 674, 812
HgaI GACGC 2 cut(s) 1051, 2588
Hin1I GRCGYC 1 cut(s) 2599
HindIII AAGCTT 1 cut(s) 1499
HinfI GANTC 5 cut(s) 318, 616, 1247, 1284, 2759
HpaII CCGG 4 cut(s) 47, 458, 674, 812
HphI GGTGA 4 cut(s) 935, 2572, 2651, 2699
Hpy166II GTNNAC 8 cut(s) 218, 501, 569, 698, 910, 1011, 2441, 2485
Hpy8I GTNNAC 8 cut(s) 218, 501, 569, 698, 910, 1011, 2441, 2485
Hpy99I CGWCG 1 cut(s) 125
HpyAV CCTTC 5 cut(s) 1534, 1626, 1703, 2162, 2293
HpyCH4III ACNGT 5 cut(s) 695, 901, 2043, 2219, 2816
HpyCH4IV ACGT 3 cut(s) 123, 850, 2835
HpyF10VI GCNNNNNNNGC 7 cut(s) 134, 262, 491, 961, 1553, 1562, 1656
HpySE526I ACGT 3 cut(s) 123, 850, 2835
Hsp92I GRCGYC 1 cut(s) 2599
KpnI GGTACC 1 cut(s) 887
LguI GCTCTTC 1 cut(s) 168
LmnI GCTCC 4 cut(s) 1449, 1544, 2843, 2980
Lsp1109I GCAGC 3 cut(s) 1668, 2137, 2561
LweI GCATC 5 cut(s) 40, 472, 1204, 2117, 2175
MabI ACCWGGT 1 cut(s) 2541
MaeI CTAG 8 cut(s) 209, 842, 890, 965, 1251, 1269, 2343, 2735
MaeII ACGT 3 cut(s) 123, 850, 2835
MaeIII GTNAC 8 cut(s) 92, 437, 895, 1090, 1370, 2132, 2639, 2748
MfeI CAATTG 1 cut(s) 1459
MflI RGATCY 5 cut(s) 631, 1261, 2200, 2302, 2332
MhlI GDGCHC 4 cut(s) 73, 571, 865, 1454
MlsI TGGCCA 1 cut(s) 2023
MluNI TGGCCA 1 cut(s) 2023
MlyI GAGTC 2 cut(s) 1293, 2768
MmeI TCCRAC 3 cut(s) 826, 1646, 2958
Mox20I TGGCCA 1 cut(s) 2023
MroXI GAANNNNTTC 2 cut(s) 1638, 2270
MscI TGGCCA 1 cut(s) 2023
MseI TTAA 7 cut(s) 306, 1497, 1532, 2069, 2426, 2714, 2766
MslI CAYNNNNRTG 4 cut(s) 277, 760, 955, 2017
Msp20I TGGCCA 1 cut(s) 2023
MspA1I CMGCKG 1 cut(s) 2258
MspI CCGG 4 cut(s) 47, 458, 674, 812
MunI CAATTG 1 cut(s) 1459
Mva1269I GAATGC 2 cut(s) 1586, 1973
MvnI CGCG 1 cut(s) 120
MwoI GCNNNNNNNGC 7 cut(s) 134, 262, 491, 961, 1553, 1562, 1656
NdeI CATATG 1 cut(s) 274
NmuCI GTSAC 5 cut(s) 92, 437, 895, 2639, 2748
NruI TCGCGA 1 cut(s) 120
NspI RCATGY 3 cut(s) 269, 806, 908
OliI CACNNNNGTG 1 cut(s) 955
PciI ACATGT 1 cut(s) 904
PciSI GCTCTTC 1 cut(s) 168
PctI GAATGC 2 cut(s) 1586, 1973
PdmI GAANNNNTTC 2 cut(s) 1638, 2270
PfeI GAWTC 3 cut(s) 318, 616, 1247
PflFI GACNNNGTC 1 cut(s) 2834
PflMI CCANNNNNTGG 2 cut(s) 25, 828
PfoI TCCNGGA 3 cut(s) 236, 874, 2450
PinAI ACCGGT 1 cut(s) 457
PkrI GCNGC 4 cut(s) 180, 1658, 2127, 2576
PleI GAGTC 2 cut(s) 1292, 2767
PpsI GAGTC 2 cut(s) 1292, 2767
PscI ACATGT 1 cut(s) 904
PsiI TTATAA 1 cut(s) 2033
Psp124BI GAGCTC 1 cut(s) 1454
PspEI GGTNACC 1 cut(s) 2639
PspOMI GGGCCC 1 cut(s) 861
PspPI GGNCC 5 cut(s) 215, 676, 776, 861, 862
PsrI GAACNNNNNNTAC 2 cut(s) 2431, 2463
PstI CTGCAG 2 cut(s) 957, 2579
PstNI CAGNNNCTG 1 cut(s) 828
PsuI RGATCY 5 cut(s) 631, 1261, 2200, 2302, 2332
PsyI GACNNNGTC 1 cut(s) 2834
PvuII CAGCTG 1 cut(s) 2258
RruI TCGCGA 1 cut(s) 120
RsaI GTAC 8 cut(s) 158, 270, 338, 502, 885, 903, 1012, 1857
RsaNI GTAC 8 cut(s) 157, 269, 337, 501, 884, 902, 1011, 1856
RseI CAYNNNNRTG 4 cut(s) 277, 760, 955, 2017
SacI GAGCTC 1 cut(s) 1454
SapI GCTCTTC 1 cut(s) 168
SaqAI TTAA 7 cut(s) 306, 1497, 1532, 2069, 2426, 2714, 2766
SatI GCNGC 4 cut(s) 179, 1657, 2126, 2575
Sau96I GGNCC 5 cut(s) 215, 676, 776, 861, 862
SchI GAGTC 2 cut(s) 1293, 2768
SduI GDGCHC 4 cut(s) 73, 571, 865, 1454
SexAI ACCWGGT 1 cut(s) 2541
SfaNI GCATC 5 cut(s) 40, 472, 1204, 2117, 2175
SfcI CTRYAG 4 cut(s) 953, 1302, 2575, 2634
SinI GGWCC 1 cut(s) 215
SmiMI CAYNNNNRTG 4 cut(s) 277, 760, 955, 2017
SmlI CTYRAG 3 cut(s) 2317, 2702, 2870
SmoI CTYRAG 3 cut(s) 2317, 2702, 2870
SpeI ACTAGT 1 cut(s) 841
SsiI CCGC 2 cut(s) 179, 1565
SspI AATATT 4 cut(s) 934, 1903, 2269, 3000
SspMI CTAG 8 cut(s) 209, 842, 890, 965, 1251, 1269, 2343, 2735
SstI GAGCTC 1 cut(s) 1454
StyI CCWWGG 2 cut(s) 1445, 1859
TaaI ACNGT 5 cut(s) 695, 901, 2043, 2219, 2816
TaiI ACGT 3 cut(s) 126, 853, 2838
TaqI TCGA 2 cut(s) 648, 1296
TatI WGTACW 4 cut(s) 156, 336, 500, 901
TauI GCSGC 1 cut(s) 181
TfiI GAWTC 3 cut(s) 318, 616, 1247
Tru1I TTAA 7 cut(s) 306, 1497, 1532, 2069, 2426, 2714, 2766
Tru9I TTAA 7 cut(s) 306, 1497, 1532, 2069, 2426, 2714, 2766
TseFI GTSAC 5 cut(s) 92, 437, 895, 2639, 2748
TseI GCWGC 3 cut(s) 1656, 2125, 2574
Tsp45I GTSAC 5 cut(s) 92, 437, 895, 2639, 2748
TspGWI ACGGA 2 cut(s) 130, 2029
Tth111I GACNNNGTC 1 cut(s) 2834
Van91I CCANNNNNTGG 2 cut(s) 25, 828
VneI GTGCAC 1 cut(s) 567
VpaK11BI GGWCC 1 cut(s) 215
XapI RAATTY 6 cut(s) 7, 587, 1695, 1751, 1842, 2250
XceI RCATGY 3 cut(s) 269, 806, 908
XcmI CCANNNNNNNNNTGG 1 cut(s) 1050
XmiI GTMKAC 1 cut(s) 697
XmnI GAANNNNTTC 2 cut(s) 1638, 2270
XspI CTAG 8 cut(s) 209, 842, 890, 965, 1251, 1269, 2343, 2735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.