pycom15g33370

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0000630
Physical Location & Seq
Forward (+)
32820121 .. 32828678
8558 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g33370.3

Sequence Viewer

Length: 2925 bp
ATGGAGAATTCTGAGGCCCACGAGTTGGGGCTCACAGATCGCCGGCCGTTCGCTCTCGGAAACTTCCGAGTCCTCCCCGACGATCTCATCTGCGACATCCTGGAATACCTCCCTCCTCGCGACGTCGCTCGCCTCGCTTGCGTCAGCAGTGTGATGTACATACTGTGCAATGAAGAGCCTCTTTGGATGAGTTTATGCCTCAGTAAAGTAAATGGTCTGCTTCAGTACAAAGGCTCGTGGAAAAAGACGGCACTGCATTTAGAGAATGTAAAATATGAATGCGACGAGGCTGGCAGAAAACCACTTTATTTTGATGGATTCAACTCCTTGTTCTTGTACAGAAGATTATACAGGTGCCATACCACATTGGATGGTTTTTCTTTTGACGATGGGAATGTGGCAAGGACGAAGAACCTCGCTATGGAAGACTTCTCTCGTGACTATGATGGGAAGAAACCGGTTTTGCTCACGGGGTTAGCTGATGCCTGGCCTGCAAGGCATACATGGACATTTGACCAGTTATTGCAGAAATATGGAGATACAGCTTTCATAATTTCTCAAAAGAGTGCTCGCAAAGTCTCAATGAAATTCAAGGATTATGTTTCATACTTGGAAATTCAACATGATGAGGATCCCCTATATATTTTTGATCACAAGTTTGGAGAGGTTGCACCTGCCTTGTTGAAAGATTACAGTGTACCTTGTCTATTTCAAGAGGACTTTTTTGATGTTTTAGATGGAGATAAACGACCTCCTTTTAGGTGGCTCATTATTGGGCCACAGAGGTCTGGTGCCTCTTGGCATGTTGATCCAGCTCTGACCAGTGCTTGGAACACACTGTTAGTAGGCCGAAAGAGGTGGGCCCTGTATCCTCCAGGAAGAGTACCGCTAGGTGTTACCGTACATGTAAACGAAGAAGATGGTGATGTCAATATTGAAACTCCATCTTCACTGCAGTGGTGGCTAGATTTTTATCCACTTCTTGCTGATGAAGACAAGCCAATAGAGTGTACCCAAGTTCCGGGGGAAACTATTTTTGTTCCAAGTGGATGGTGGCACTGTGTCCTAAATCTGGAACCAAGTATTGCCGTTACCCAGAACTTTGTAAATCCCAAAAACTTTGAATTTGTGTGTTTAGATATGGCACCTGGTTATCGTCATAAGGGAGTTTGCCGTGCTGGATTACTTGCCCATGAAGAAGGAAATTCGGAGAATGATTCTATTATCTCTGATCCGATTAGGAAAAAGAAACGAGTGAGAACTCTCGAACCTGGAGAAAAGAATGCTGATGCTGCCTCTAATGACCGTAATGTACCACAAGGGAGTTACCAGGGTTTTTCGTATGACATCAATTTCTTAGCCATGTATCTGGACAAAGAGAGAGACCACTACAACTCTCCTTGGAGCTCGGGCAATTGCATAGGACAAAGAGAAATGAGAGAATGGTTATTTAAGCTTTGGTGTGGAAAACCAGGAATGAGAGACTTAATCTGGAAGGGAGCTTGTCTTGCATTAAATGCAGGGAGATGGTCCGAATGCCTGGCAGAAATTTGTGCATTCCATAATTTGCCTTCTCCAGCAGAAGATGAGAGGCTTCCTGTTGGCACTGGTAGCAATCCTGTTTATCTCTTGAGCGACTGTGTAATCAAAATTTTTGTTGAAGAAGGGCTGGAAACGTCACTCTATGGTCTGGGCACAGAGCTAGAGTTTTACAATCTCCTATGCAAAGTCAATTCCCCTCTGAAAAATCACATGCCTGATGTTTTGGAAAGTGCGATCATTTATCTTGAGAATGGAGTTTACAGAATTGTACCATGGGATGGCAGCACGGTTCCTGATGTGATTGCCAGATGCAATCTTATTCCTGAGAAGTTCAATGCAGATGGTTGTCCTTTTGGTGTATGGAGTAAAAAACAATTTAATTACAGAAAGGCTGGGATGCCAATACATGAAACTGTCAGCTCACCTGACTGCTCAAGAATATGGCCATATCTTATAACAAAACGATGCAAAGGAAAAATATACGCAGAGTTAAGAGATACCATATCATTGGAAGATGCACTGAACTTAGCATCCTTTCTGGGAGAGCAGCTCCGTAACCTCCATCTCTTGCCCCGGCCACCTCTTAGTGTCTCAACTTTCTCAGATATTGAACCAGAATTAGATATGCCCTTATCTAATGATTGTATGGAGGCTGTTCCTGATAAATCAAAAATTCCAGCTGAATGGAATATTTTCATCAGAACTCTAATCAGGAAGAAGAAGGATGTCTCAAGCCGCTTGGTTAAATGGGGAGATCCAATTCCTGCCACACTAATAGAGAAAGTCGATGAATACTTACCAGATGATTTGGCCAAGTTGCTTCACGTATTTGAGGATGAAAATGGCTTAAACAAAGTGGGTAAACTTTGTTCCTGGATACACTCAGATATCATGGATGATAACATTCACCTGGAATCGTGTGGTGCTAATTCTTGCTTGATTGAGAACACCAAAGACAATGGTCTGGTAACCAATGGTTCAGAAAATGGAAATGGCAACAGTGCAGGGACTGAGTCATGGCGTCCTAGCCACATTCTTGATTTCAGTGATCTTTCTATAGGTGACCCCATTTTTGATATAATACCCATATACTTGGATATATTTAGAGGTGATACGCGTCTCCTTAAGCGGCTTTTAGAAAGCTATAAACTTCCTTTAGTGAGTGGAGAATCAAAGAATAAGTCTGTTAAGGGTGGAGACGAGTTTGGACGGCTATCCTACCATGCGATGTGCTACTGTATTCTGCATGAAGAGAATGTGTTGGGAGCTATTTTTAGCATGTGGAACGAACTCAAGACGGCAAAGACATGGGAAGAAGTTGAGCAAGTGGTGTGGGGAGAGTTGAATAATTACAAGGGTTTCCCTGGTTTATCTTCCACTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
APH Cupin_8 F-box F-box-like JmjC

Protein Analysis

975

Amino Acids

110.56

Weight (kDa)

5.22

Isoelectric Point (pI)

44.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000630)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78280
fragaria_vesca FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800
malus_domestica MD08G1186800.v1.1 MD15G1372700.v1.1
prunus_persica Prupe.1G521300_v2.0.a1 Prupe.1G521300_v2.0.a1
pyrus_communis pycom08g16060 pycom15g33370
rosa_chinensis RchiOBHm_Chr2g0139391 RchiOBHm_Chr7g0242931 RchiOBHm_Chr7g0242951 RchiOBHm_Chr7g0243001 RchiOBHm_Chr7g0243011 RchiOBHm_Chr7g0243141 RchiOBHm_Chr7g0243151 RchiOBHm_Chr7g0243351
rosa_laevigata RLG00000000853 RLG00000000857 RLG00000000858 RLG00000000863 RLG00000000867
rosa_multiflora Rmu_co8457323.1_g000001 Rmu_sc0000083.1_g000017 Rmu_sc0000679.1_g000021 Rmu_sc0001036.1_g000029 Rmu_sc0001036.1_g000032 Rmu_sc0001176.1_g000015 Rmu_sc0001461.1_g000002 Rmu_sc0001461.1_g000003 Rmu_sc0001461.1_g000056 Rmu_sc0001461.1_g000057 Rmu_sc0001461.1_g000098 Rmu_sc0001461.1_g000105 Rmu_sc0004165.1_g000084 Rmu_sc0006141.1_g000004 Rmu_sc0033806.1_g000001
rosa_roxburghii Rroxscaffold_3G00222160 Rroxscaffold_3G00222220 Rroxscaffold_4G00316290
rosa_rugosa Rorug07G0318400 Rorug07G0318400 Rorug07G0318600
rosa_samantha Rh4CG066500 Rh5DG444300 Rh7AG473700 Rh7AG473900 Rh7AG474000 Rh7AG474600 Rh7AG474800 Rh7BG444500 Rh7BG444700 Rh7CG490700 Rh7CG490800 Rh7CG491000 Rh7DG458900 Rh7DG459000 Rh7DG459300
rosa_wichuraiana Rw7G038970 Rw7G039050 Rw7G039420 Rw7G039480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1997
AarI CACCTGC 1 cut(s) 682
AatII GACGTC 1 cut(s) 126
Acc36I ACCTGC 1 cut(s) 682
AccB1I GGYRCC 3 cut(s) 354, 791, 1144
AccB7I CCANNNNNTGG 3 cut(s) 25, 828, 1820
AccII CGCG 2 cut(s) 120, 2659
AciI CCGC 3 cut(s) 887, 2278, 2671
AclWI GGATC 5 cut(s) 626, 639, 803, 1226, 2291
AcoI YGGCCR 4 cut(s) 44, 1985, 2117, 2352
AcsI RAATTY 8 cut(s) 7, 587, 615, 1124, 1204, 1548, 1650, 2214
AcuI CTGAAG 1 cut(s) 206
AcyI GRCGYC 2 cut(s) 123, 2563
AfaI GTAC 9 cut(s) 158, 227, 338, 699, 885, 903, 1012, 1314, 1812
AfiI CCNNNNNNNGG 6 cut(s) 25, 421, 828, 1021, 1072, 1820
AflII CTTAAG 1 cut(s) 2666
AflIII ACRYGT 2 cut(s) 904, 2657
AgeI ACCGGT 1 cut(s) 457
AleI CACNNNNGTG 1 cut(s) 955
AloI GAACNNNNNNTCC 2 cut(s) 2057, 2089
Alw21I GWGCWC 2 cut(s) 571, 1409
Alw26I GTCTC 7 cut(s) 583, 1377, 1476, 2137, 2275, 2666, 2733
AlwI GGATC 5 cut(s) 626, 639, 803, 1226, 2291
AlwNI CAGNNNCTG 1 cut(s) 2552
Ama87I CYCGRG 1 cut(s) 1408
AoxI GGCC 9 cut(s) 15, 44, 488, 776, 847, 861, 1985, 2117, 2352
ApaI GGGCCC 1 cut(s) 865
ApeKI GCWGC 3 cut(s) 1292, 1824, 2089
ApoI RAATTY 8 cut(s) 7, 587, 615, 1124, 1204, 1548, 1650, 2214
ArsI GACNNNNNNTTYG 4 cut(s) 2597, 2629, 2708, 2740
AsiGI ACCGGT 1 cut(s) 457
Asp700I GAANNNNTTC 1 cut(s) 2234
AspS9I GGNCC 5 cut(s) 16, 776, 861, 862, 1530
AsuC2I CCSGG 2 cut(s) 1023, 2116
AsuHPI GGTGA 5 cut(s) 935, 1956, 2441, 2615, 2663
AvaI CYCGRG 1 cut(s) 1408
AvaII GGWCC 1 cut(s) 1530
BaeGI GKGCMC 2 cut(s) 865, 1697
BalI TGGCCA 2 cut(s) 1987, 2354
BamHI GGATCC 1 cut(s) 631
BanI GGYRCC 3 cut(s) 354, 791, 1144
BanII GRGCYC 3 cut(s) 33, 865, 1409
BauI CACGAG 3 cut(s) 20, 235, 435
BbsI GAAGAC 2 cut(s) 432, 999
Bbv12I GWGCWC 2 cut(s) 571, 1409
BbvI GCAGC 3 cut(s) 1279, 1836, 2101
BceAI ACGGC 6 cut(s) 31, 264, 1073, 1158, 2768, 2856
BciVI GTATCC 2 cut(s) 879, 2412
BclI TGATCA 1 cut(s) 649
BcnI CCSGG 2 cut(s) 1023, 2116
BcoDI GTCTC 7 cut(s) 583, 1377, 1476, 2137, 2275, 2666, 2733
BfaI CTAG 4 cut(s) 890, 965, 1703, 2568
BfmI CTRYAG 2 cut(s) 953, 2598
BfrI CTTAAG 1 cut(s) 2666
BfuAI ACCTGC 1 cut(s) 682
BfuI GTATCC 2 cut(s) 879, 2412
BglI GCCNNNNNGGC 1 cut(s) 496
BisI GCNGC 5 cut(s) 1293, 1825, 2090, 2278, 2672
BlsI GCNGC 5 cut(s) 1294, 1826, 2091, 2279, 2673
Bme18I GGWCC 1 cut(s) 1530
BmeT110I CYCGRG 1 cut(s) 1408
BmgT120I GGNCC 5 cut(s) 16, 776, 861, 862, 1530
BmiI GGNNCC 7 cut(s) 356, 633, 793, 863, 1077, 1146, 1833
BmsI GCATC 7 cut(s) 472, 1279, 1841, 1929, 1997, 2047, 2081
BoxI GACNNNNGTC 1 cut(s) 2502
BpiI GAAGAC 2 cut(s) 432, 999
BplI GAGNNNNNCTC 2 cut(s) 2076, 2108
BpmI CTGGAG 3 cut(s) 858, 1293, 1560
BpuEI CTTGAG 5 cut(s) 1651, 1808, 1960, 2257, 2819
BpuMI CCSGG 2 cut(s) 1023, 2116
BsaAI YACGTR 1 cut(s) 2368
BsaBI GATNNNNATC 2 cut(s) 630, 972
BsaHI GRCGYC 2 cut(s) 123, 2563
BsaI GGTCTC 1 cut(s) 1377
BsaJI CCNNGG 6 cut(s) 1022, 1330, 1400, 1814, 2114, 2905
BsaWI WCCGGW 1 cut(s) 457
Bsc4I CCNNNNNNNGG 6 cut(s) 25, 421, 828, 1021, 1072, 1820
Bse118I RCCGGY 2 cut(s) 42, 457
Bse1I ACTGG 3 cut(s) 517, 822, 1612
Bse3DI GCAATG 1 cut(s) 175
Bse8I GATNNNNATC 2 cut(s) 630, 972
BseDI CCNNGG 6 cut(s) 1022, 1330, 1400, 1814, 2114, 2905
BseJI GATNNNNATC 2 cut(s) 630, 972
BseLI CCNNNNNNNGG 6 cut(s) 25, 421, 828, 1021, 1072, 1820
BseMI GCAATG 1 cut(s) 175
BseMII CTCAG 5 cut(s) 214, 1857, 2157, 2439, 2544
BseNI ACTGG 3 cut(s) 517, 822, 1612
BseRI GAGGAG 1 cut(s) 105
BseSI GKGCMC 2 cut(s) 865, 1697
BseX3I CGGCCG 1 cut(s) 44
BseXI GCAGC 3 cut(s) 1279, 1836, 2101
BseYI CCCAGC 1 cut(s) 1934
BsgI GTGCAG 1 cut(s) 2565
Bsh1236I CGCG 2 cut(s) 120, 2659
Bsh1285I CGRYCG 1 cut(s) 47
BshFI GGCC 9 cut(s) 17, 46, 490, 778, 849, 863, 1987, 2119, 2354
BshNI GGYRCC 3 cut(s) 354, 791, 1144
BshTI ACCGGT 1 cut(s) 457
BsiEI CGRYCG 1 cut(s) 47
BsiHKAI GWGCWC 2 cut(s) 571, 1409
BsiHKCI CYCGRG 1 cut(s) 1408
BsiSI CCGG 4 cut(s) 43, 458, 1022, 2116
BslFI GGGAC 1 cut(s) 2563
BslI CCNNNNNNNGG 6 cut(s) 25, 421, 828, 1021, 1072, 1820
BsmAI GTCTC 7 cut(s) 583, 1377, 1476, 2137, 2275, 2666, 2733
BsmBI CGTCTC 2 cut(s) 2666, 2733
BsmFI GGGAC 1 cut(s) 2563
BsmI GAATGC 4 cut(s) 284, 1288, 1541, 1556
BsnI GGCC 9 cut(s) 17, 46, 490, 778, 849, 863, 1987, 2119, 2354
Bso31I GGTCTC 1 cut(s) 1377
BsoBI CYCGRG 1 cut(s) 1408
Bsp120I GGGCCC 1 cut(s) 861
Bsp1286I GDGCHC 5 cut(s) 33, 571, 865, 1409, 1697
Bsp1407I TGTACA 2 cut(s) 156, 336
Bsp143I GATC 9 cut(s) 37, 82, 631, 649, 808, 1231, 1776, 2296, 2590
Bsp19I CCATGG 1 cut(s) 1814
Bsp68I TCGCGA 1 cut(s) 120
BspACI CCGC 3 cut(s) 887, 2278, 2671
BspANI GGCC 9 cut(s) 17, 46, 490, 778, 849, 863, 1987, 2119, 2354
BspCNI CTCAG 6 cut(s) 4, 213, 1858, 2156, 2438, 2545
BspFNI CGCG 2 cut(s) 120, 2659
BspLI GGNNCC 7 cut(s) 356, 633, 793, 863, 1077, 1146, 1833
BspMAI CTGCAG 1 cut(s) 957
BspMI ACCTGC 1 cut(s) 682
BspPI GGATC 5 cut(s) 626, 639, 803, 1226, 2291
BspQI GCTCTTC 1 cut(s) 168
BspT107I GGYRCC 3 cut(s) 354, 791, 1144
BspTI CTTAAG 1 cut(s) 2666
BspTNI GGTCTC 1 cut(s) 1377
BsrDI GCAATG 1 cut(s) 175
BsrFI RCCGGY 2 cut(s) 42, 457
BsrGI TGTACA 2 cut(s) 156, 336
BsrI ACTGG 3 cut(s) 517, 822, 1612
BssAI RCCGGY 2 cut(s) 42, 457
BssECI CCNNGG 6 cut(s) 1022, 1330, 1400, 1814, 2114, 2905
BssMI GATC 9 cut(s) 37, 82, 631, 649, 808, 1231, 1776, 2296, 2590
BssNI GRCGYC 2 cut(s) 123, 2563
BssSI CACGAG 3 cut(s) 20, 235, 435
BssT1I CCWWGG 2 cut(s) 1400, 1814
Bst2BI CACGAG 3 cut(s) 20, 235, 435
Bst6I CTCTTC 3 cut(s) 168, 874, 2787
BstACI GRCGYC 2 cut(s) 123, 2563
BstAFI CTTAAG 1 cut(s) 2666
BstAPI GCANNNNNTGC 1 cut(s) 1517
BstAUI TGTACA 2 cut(s) 156, 336
BstBAI YACGTR 1 cut(s) 2368
BstC8I GCNNGC 6 cut(s) 44, 130, 139, 292, 492, 571
BstDSI CCRYGG 1 cut(s) 1814
BstEII GGTNACC 2 cut(s) 2509, 2603
BstFNI CGCG 2 cut(s) 120, 2659
BstKTI GATC 9 cut(s) 40, 85, 634, 652, 811, 1234, 1779, 2299, 2593
BstMAI GTCTC 7 cut(s) 583, 1377, 1476, 2137, 2275, 2666, 2733
BstMBI GATC 9 cut(s) 37, 82, 631, 649, 808, 1231, 1776, 2296, 2590
BstMCI CGRYCG 1 cut(s) 47
BstMWI GCNNNNNNNGC 9 cut(s) 134, 138, 491, 496, 961, 1292, 1508, 1517, 1611
BstNSI RCATGY 4 cut(s) 806, 908, 1756, 2824
BstPAI GACNNNNGTC 1 cut(s) 2502
BstPI GGTNACC 2 cut(s) 2509, 2603
BstSFI CTRYAG 2 cut(s) 953, 2598
BstSLI GKGCMC 2 cut(s) 865, 1697
BstUI CGCG 2 cut(s) 120, 2659
BstV1I GCAGC 3 cut(s) 1279, 1836, 2101
BstV2I GAAGAC 2 cut(s) 432, 999
BstX2I RGATCY 2 cut(s) 631, 2296
BstXI CCANNNNNNTGG 5 cut(s) 1050, 1369, 2050, 2226, 2635
BstYI RGATCY 2 cut(s) 631, 2296
BstZI CGGCCG 1 cut(s) 44
BsuI GTATCC 2 cut(s) 879, 2412
BsuRI GGCC 9 cut(s) 17, 46, 490, 778, 849, 863, 1987, 2119, 2354
BtgI CCRYGG 1 cut(s) 1814
BtgZI GCGATG 1 cut(s) 2783
BtsI GCAGTG 4 cut(s) 154, 251, 950, 962
BtuMI TCGCGA 1 cut(s) 120
BveI ACCTGC 1 cut(s) 682
Cac8I GCNNGC 6 cut(s) 44, 130, 139, 292, 492, 571
CaiI CAGNNNCTG 1 cut(s) 2552
Cfr10I RCCGGY 2 cut(s) 42, 457
Cfr13I GGNCC 5 cut(s) 16, 776, 861, 862, 1530
CseI GACGC 3 cut(s) 130, 2552, 2648
CsiI ACCWGGT 1 cut(s) 1147
Csp6I GTAC 9 cut(s) 157, 226, 337, 698, 884, 902, 1011, 1313, 1811
CspAI ACCGGT 1 cut(s) 457
CspCI CAANNNNNGTGG 2 cut(s) 2855, 2890
CviQI GTAC 9 cut(s) 157, 226, 337, 698, 884, 902, 1011, 1313, 1811
DpnI GATC 9 cut(s) 39, 84, 633, 651, 810, 1233, 1778, 2298, 2592
DpnII GATC 9 cut(s) 37, 82, 631, 649, 808, 1231, 1776, 2296, 2590
EaeI YGGCCR 4 cut(s) 44, 1985, 2117, 2352
EagI CGGCCG 1 cut(s) 44
Eam1104I CTCTTC 3 cut(s) 168, 874, 2787
EarI CTCTTC 3 cut(s) 168, 874, 2787
Ecl136II GAGCTC 1 cut(s) 1407
EclXI CGGCCG 1 cut(s) 44
Eco130I CCWWGG 2 cut(s) 1400, 1814
Eco24I GRGCYC 3 cut(s) 33, 865, 1409
Eco31I GGTCTC 1 cut(s) 1377
Eco32I GATATC 1 cut(s) 2431
Eco47I GGWCC 1 cut(s) 1530
Eco52I CGGCCG 1 cut(s) 44
Eco53kI GAGCTC 1 cut(s) 1407
Eco57I CTGAAG 1 cut(s) 206
Eco88I CYCGRG 1 cut(s) 1408
Eco91I GGTNACC 2 cut(s) 2509, 2603
EcoICRI GAGCTC 1 cut(s) 1407
EcoO109I RGGNCCY 1 cut(s) 862
EcoO65I GGTNACC 2 cut(s) 2509, 2603
EcoRI GAATTC 1 cut(s) 7
EcoRV GATATC 1 cut(s) 2431
EcoT14I CCWWGG 2 cut(s) 1400, 1814
EcoT38I GRGCYC 3 cut(s) 33, 865, 1409
ErhI CCWWGG 2 cut(s) 1400, 1814
Esp3I CGTCTC 2 cut(s) 2666, 2733
FalI AAGNNNNNCTT 2 cut(s) 165, 197
FaqI GGGAC 1 cut(s) 2563
FbaI TGATCA 1 cut(s) 649
Fnu4HI GCNGC 5 cut(s) 1293, 1825, 2090, 2278, 2672
FriOI GRGCYC 3 cut(s) 33, 865, 1409
Fsp4HI GCNGC 5 cut(s) 1293, 1825, 2090, 2278, 2672
FspBI CTAG 4 cut(s) 890, 965, 1703, 2568
GluI GCNGC 5 cut(s) 1293, 1825, 2090, 2278, 2672
GsaI CCCAGC 1 cut(s) 1938
GsuI CTGGAG 3 cut(s) 858, 1293, 1560
HaeIII GGCC 9 cut(s) 17, 46, 490, 778, 849, 863, 1987, 2119, 2354
HapII CCGG 4 cut(s) 43, 458, 1022, 2116
HgaI GACGC 3 cut(s) 130, 2552, 2648
Hin1I GRCGYC 2 cut(s) 123, 2563
HindIII AAGCTT 1 cut(s) 1454
HinfI GANTC 6 cut(s) 69, 318, 1217, 2456, 2555, 2711
HpaII CCGG 4 cut(s) 43, 458, 1022, 2116
HphI GGTGA 5 cut(s) 935, 1956, 2441, 2615, 2663
Hpy166II GTNNAC 5 cut(s) 698, 910, 1011, 1801, 2405
Hpy8I GTNNAC 5 cut(s) 698, 910, 1011, 1801, 2405
Hpy99I CGWCG 4 cut(s) 83, 125, 128, 287
HpyAV CCTTC 5 cut(s) 1193, 1489, 1581, 1658, 2257
HpyCH4IV ACGT 3 cut(s) 123, 1676, 2367
HpyF10VI GCNNNNNNNGC 9 cut(s) 134, 138, 491, 496, 961, 1292, 1508, 1517, 1611
HpySE526I ACGT 3 cut(s) 123, 1676, 2367
Hsp92I GRCGYC 2 cut(s) 123, 2563
KroI GCCGGC 1 cut(s) 42
KroNI GCCGGC 1 cut(s) 44
Ksp22I TGATCA 1 cut(s) 649
Kzo9I GATC 9 cut(s) 37, 82, 631, 649, 808, 1231, 1776, 2296, 2590
LguI GCTCTTC 1 cut(s) 168
LmnI GCTCC 4 cut(s) 1404, 1499, 2097, 2807
Lsp1109I GCAGC 3 cut(s) 1279, 1836, 2101
LweI GCATC 7 cut(s) 472, 1279, 1841, 1929, 1997, 2047, 2081
MabI ACCWGGT 1 cut(s) 1147
MaeI CTAG 4 cut(s) 890, 965, 1703, 2568
MaeII ACGT 3 cut(s) 123, 1676, 2367
MaeIII GTNAC 8 cut(s) 437, 895, 1090, 1325, 1677, 2096, 2509, 2603
MalI GATC 9 cut(s) 39, 84, 633, 651, 810, 1233, 1778, 2298, 2592
MboI GATC 9 cut(s) 37, 82, 631, 649, 808, 1231, 1776, 2296, 2590
MfeI CAATTG 1 cut(s) 1414
MflI RGATCY 2 cut(s) 631, 2296
MhlI GDGCHC 5 cut(s) 33, 571, 865, 1409, 1697
MlsI TGGCCA 2 cut(s) 1987, 2354
MluI ACGCGT 1 cut(s) 2657
MluNI TGGCCA 2 cut(s) 1987, 2354
MlyI GAGTC 2 cut(s) 78, 2564
Mox20I TGGCCA 2 cut(s) 1987, 2354
MroNI GCCGGC 1 cut(s) 42
MroXI GAANNNNTTC 1 cut(s) 2234
MscI TGGCCA 2 cut(s) 1987, 2354
MseI TTAA 9 cut(s) 1452, 1487, 1514, 1920, 2033, 2286, 2390, 2667, 2730
MslI CAYNNNNRTG 1 cut(s) 955
Msp20I TGGCCA 2 cut(s) 1987, 2354
MspA1I CMGCKG 1 cut(s) 2222
MspCI CTTAAG 1 cut(s) 2666
MspI CCGG 4 cut(s) 43, 458, 1022, 2116
MunI CAATTG 1 cut(s) 1414
Mva1269I GAATGC 4 cut(s) 284, 1288, 1541, 1556
MvnI CGCG 2 cut(s) 120, 2659
MwoI GCNNNNNNNGC 9 cut(s) 134, 138, 491, 496, 961, 1292, 1508, 1517, 1611
NaeI GCCGGC 1 cut(s) 44
NciI CCSGG 2 cut(s) 1023, 2116
NcoI CCATGG 1 cut(s) 1814
NdeII GATC 9 cut(s) 37, 82, 631, 649, 808, 1231, 1776, 2296, 2590
NgoMIV GCCGGC 1 cut(s) 42
NlaIV GGNNCC 7 cut(s) 356, 633, 793, 863, 1077, 1146, 1833
NmuCI GTSAC 3 cut(s) 437, 1677, 2603
NruI TCGCGA 1 cut(s) 120
NspI RCATGY 4 cut(s) 806, 908, 1756, 2824
OliI CACNNNNGTG 1 cut(s) 955
PaqCI CACCTGC 1 cut(s) 682
PciI ACATGT 1 cut(s) 904
PciSI GCTCTTC 1 cut(s) 168
PctI GAATGC 4 cut(s) 284, 1288, 1541, 1556
PdiI GCCGGC 1 cut(s) 44
PdmI GAANNNNTTC 1 cut(s) 2234
PfeI GAWTC 4 cut(s) 318, 1217, 2456, 2711
PflFI GACNNNGTC 1 cut(s) 2554
PflMI CCANNNNNTGG 3 cut(s) 25, 828, 1820
PfoI TCCNGGA 3 cut(s) 99, 874, 2414
PinAI ACCGGT 1 cut(s) 457
PkrI GCNGC 5 cut(s) 1294, 1826, 2091, 2279, 2673
PleI GAGTC 2 cut(s) 77, 2563
PpsI GAGTC 2 cut(s) 77, 2563
Ppu21I YACGTR 1 cut(s) 2368
PscI ACATGT 1 cut(s) 904
PshAI GACNNNNGTC 1 cut(s) 2502
PsiI TTATAA 1 cut(s) 1997
Psp124BI GAGCTC 1 cut(s) 1409
PspEI GGTNACC 2 cut(s) 2509, 2603
PspFI CCCAGC 1 cut(s) 1934
PspN4I GGNNCC 7 cut(s) 356, 633, 793, 863, 1077, 1146, 1833
PspOMI GGGCCC 1 cut(s) 861
PspPI GGNCC 5 cut(s) 16, 776, 861, 862, 1530
PsrI GAACNNNNNNTAC 2 cut(s) 2395, 2427
PstI CTGCAG 1 cut(s) 957
PstNI CAGNNNCTG 1 cut(s) 2552
PsuI RGATCY 2 cut(s) 631, 2296
PsyI GACNNNGTC 1 cut(s) 2554
PvuII CAGCTG 1 cut(s) 2222
RruI TCGCGA 1 cut(s) 120
RsaI GTAC 9 cut(s) 158, 227, 338, 699, 885, 903, 1012, 1314, 1812
RsaNI GTAC 9 cut(s) 157, 226, 337, 698, 884, 902, 1011, 1313, 1811
RseI CAYNNNNRTG 1 cut(s) 955
SacI GAGCTC 1 cut(s) 1409
SapI GCTCTTC 1 cut(s) 168
SaqAI TTAA 9 cut(s) 1452, 1487, 1514, 1920, 2033, 2286, 2390, 2667, 2730
SatI GCNGC 5 cut(s) 1293, 1825, 2090, 2278, 2672
Sau3AI GATC 9 cut(s) 37, 82, 631, 649, 808, 1231, 1776, 2296, 2590
Sau96I GGNCC 5 cut(s) 16, 776, 861, 862, 1530
SchI GAGTC 2 cut(s) 78, 2564
SduI GDGCHC 5 cut(s) 33, 571, 865, 1409, 1697
SexAI ACCWGGT 1 cut(s) 1147
SfaNI GCATC 7 cut(s) 472, 1279, 1841, 1929, 1997, 2047, 2081
SfcI CTRYAG 2 cut(s) 953, 2598
SinI GGWCC 1 cut(s) 1530
SmiMI CAYNNNNRTG 1 cut(s) 955
SmlI CTYRAG 6 cut(s) 1630, 1787, 1975, 2272, 2666, 2834
SmoI CTYRAG 6 cut(s) 1630, 1787, 1975, 2272, 2666, 2834
SsiI CCGC 3 cut(s) 887, 2278, 2671
SspI AATATT 2 cut(s) 934, 2233
SspMI CTAG 4 cut(s) 890, 965, 1703, 2568
SstI GAGCTC 1 cut(s) 1409
StyI CCWWGG 2 cut(s) 1400, 1814
TaiI ACGT 3 cut(s) 126, 1679, 2370
TaqI TCGA 2 cut(s) 1266, 2328
TatI WGTACW 3 cut(s) 156, 225, 336
TauI GCSGC 2 cut(s) 2280, 2674
TfiI GAWTC 4 cut(s) 318, 1217, 2456, 2711
Tru1I TTAA 9 cut(s) 1452, 1487, 1514, 1920, 2033, 2286, 2390, 2667, 2730
Tru9I TTAA 9 cut(s) 1452, 1487, 1514, 1920, 2033, 2286, 2390, 2667, 2730
TseFI GTSAC 3 cut(s) 437, 1677, 2603
TseI GCWGC 3 cut(s) 1292, 1824, 2089
Tsp45I GTSAC 3 cut(s) 437, 1677, 2603
TspGWI ACGGA 1 cut(s) 2084
Tth111I GACNNNGTC 1 cut(s) 2554
Van91I CCANNNNNTGG 3 cut(s) 25, 828, 1820
Vha464I CTTAAG 1 cut(s) 2666
VpaK11BI GGWCC 1 cut(s) 1530
XapI RAATTY 8 cut(s) 7, 587, 615, 1124, 1204, 1548, 1650, 2214
XceI RCATGY 4 cut(s) 806, 908, 1756, 2824
XcmI CCANNNNNNNNNTGG 1 cut(s) 1050
XmnI GAANNNNTTC 1 cut(s) 2234
XspI CTAG 4 cut(s) 890, 965, 1703, 2568
ZraI GACGTC 1 cut(s) 124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.