Rh7DG459300

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000630
Physical Location & Seq
Reverse (-)
65363738 .. 65371986
8249 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG459300.1

Sequence Viewer

Length: 2361 bp
ATGGAGATTTCCGAAGCCCCTCCCTTCCGGCCAAGAGATCGCCGCCCGGACGCCCTCGGAAACTTCCTAGTCCTCCCCGACGAGCTCATCTGTGCCGTCTTGGAGTTGCTCTCTCCTCGCGACGTTGCTCGCCTCTCATGCGTTAGCAGTGTGATGTATATATTTTGCAATGAAGAGCCACTCTGGTTGAGTTTATGCCTTAACACACTGAACGGTCCGCTGGAGTACAAAGGATCATGGAAGAAGACGGTGCTACATTTGGAGAATGTGTCGTATGAACGCGATGAGGCTTGCAGAAAACCATTGAGTTTTGATGGATTCGACTCTTTGTTCTTGTACAGAAGATTATACAGGTGTCATACCACATTGGATGGTTTTTCTTTTGACAATGGGAATGTGGAAAGAAAGGACAAGATCACATTGGAAGAGTTTTCTTGTGATTATGATGGGAAGAAACCGGTTTTGCTCACTGGATTAGCTGATGCATGGCCTGCAAGGCGTACATGGACACTTGACCACTTATTGCAGAATTATGGAGATACAGCTTTCAAGATTTCTCAAAGGAGCTCACGTAAAATCTCAATGACATTCAAAGATTATGTTTCATATATGAAGGTTCAGCATGATGAGGATCCGCTTTATATCTTTGATCACAAGTTTGGAGAGGTTGAACCTGGCTTGTTGAAAGATTACAGTGTACCTTATCTATTTCAAGAGGACTTTTTTGATGTTTTGGACAAAGATAAGCGACCTCCATTTAGATGGCTCATTATTGGTCCCCAGAGGTCTGGTGCTTCTTGGCATGTTGATCCAGCTCTGACCAGTGCCTGGAATACACTTCTATGTGGTCGTAAAAGGTGGGCCTTGTATCCTCCAGGAAGAGTACCTATAGGTGTCACAGTACATGTAAACGAAGAAGACGGTGATGTCAATATTGAAACTCCAACTTCGTTGCAGTGGTGGCTAGATTTTTATCCACTTCTTGCTGATGAAGACAAGCCCATAGAATGCACCCAAATGCCGGGGGAGACGATTTTCGTTCCTAGTGGATGGTGGCACTGTGTCCTAAATCTTGAACCATCTATTGCTGTTACCCAGAACTTTGTAAATTCTAAGAACTTTGAATTTGTGTGCTTGGATATGGCACCTGGTTATCGTCATAAGGGAGTTTGCCGTGCTGGATTACTTGCAGATGATGAAGGCGGTATTGAGGATTCCACAAATCATATTCTCTATGATAAAGATGATTATAATTCCTCAGATATGACTAGGAAAGTAAAAAGAGTCAGAACTCTCAAACCTGGAGAATATCCTAGAAGTGAAAGAACTAGTAATGGTGCTCAGGGTTTTTCTTATGATGTAAATTTCTTAGCCATGTATCTGGATGAAGAGAGAGATCATTACAACTCTCCTTGGAGCTCAGGCAATTGCATAGGGCAACGAGAAATGAGAGAGTGGTTATTCAAGCTTTGGGTTGGAAAACCAGGAATGAGAGACTTGATCTGGAAGGGAGCATGTCTTGCACTAAATGCTAGCAAATGGTCAGAATCCCTGGCAGAAATTTGTGCCTTCCACAAATTGCCTTCTCCAACAGATGATGAGAGGCTTCCAGTTGGCACGGGTAGCAATCCTGTTTATCTCATGAGCAACTGCGTAATCAAAATTTTTGTTGAGGAAGGACTGGAAACTTCACTTTATGGATTAGGTGCTGAGCTTGAGTTCTACAGTCTCCTAGGCAAAGTCAACTCCCCTCTGAAAAATCACGTACCTGACGTTTTGGCAAGTGGGATCATTTATCTTGAAAATGGAACATATAAAATTGTACCTTGGGATGGCATCAGAGTTCCTGATGTGATTGCTAACTGCAATTTTATTCCGGAGAAGGTCAAAGGAGATGTTTCTCCTTTTGGTGTATGGAGGAAGAAACAATTTGAATACAGAAAAGCTGGGGTCTCAACAAACGAATCCATCAGTTCAGCTGAATATACAAGGATTTGGCCATATCTCATATCAAAACGATGCAAAGGAAAAATATATGCAGAGTTAAGAGATACTGTGTCACGGGAAGATGAACTGAACTTAGCTTCCTTCCTGGGAGAGCAGCTCCGTAACCTCCATCTCTTGCCCCATCCACCTCTTAATATCTCAACTTTCTCAGATATTGAACAGGGATCAGATTTTCCATTCACCAACGGTAGTATGGAAGCTGTTCCCCATAAATCAAACATTCCTGCTGAATGGGATATATTCATTAGAACTCTATTCAAGAAGAAGAAGGATGTCTCAAGTCGCTTGATTAAATGGTATTTCTGTCCCTTCTACAAGAAGGTTTTTGTCTGTTACTTTTTCAGAACGTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
APH Cupin_8 F-box F-box-like JmjC

Protein Analysis

786

Amino Acids

90.34

Weight (kDa)

5.79

Isoelectric Point (pI)

44.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 23 - 67 2.4e-07 F-box-like
F-box PF00646 23 - 63 9.3e-06 F-box domain
Cupin_8 PF13621 149 - 371 1.6e-19 Cupin-like domain
JmjC PF02373 255 - 368 1.1e-14 JmjC domain, hydroxylase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000630)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78280
fragaria_vesca FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800
malus_domestica MD08G1186800.v1.1 MD15G1372700.v1.1
prunus_persica Prupe.1G521300_v2.0.a1 Prupe.1G521300_v2.0.a1
pyrus_communis pycom08g16060 pycom15g33370
rosa_chinensis RchiOBHm_Chr2g0139391 RchiOBHm_Chr7g0242931 RchiOBHm_Chr7g0242951 RchiOBHm_Chr7g0243001 RchiOBHm_Chr7g0243011 RchiOBHm_Chr7g0243141 RchiOBHm_Chr7g0243151 RchiOBHm_Chr7g0243351
rosa_laevigata RLG00000000853 RLG00000000857 RLG00000000858 RLG00000000863 RLG00000000867
rosa_multiflora Rmu_co8457323.1_g000001 Rmu_sc0000083.1_g000017 Rmu_sc0000679.1_g000021 Rmu_sc0001036.1_g000029 Rmu_sc0001036.1_g000032 Rmu_sc0001176.1_g000015 Rmu_sc0001461.1_g000002 Rmu_sc0001461.1_g000003 Rmu_sc0001461.1_g000056 Rmu_sc0001461.1_g000057 Rmu_sc0001461.1_g000098 Rmu_sc0001461.1_g000105 Rmu_sc0004165.1_g000084 Rmu_sc0006141.1_g000004 Rmu_sc0033806.1_g000001
rosa_roxburghii Rroxscaffold_3G00222160 Rroxscaffold_3G00222220 Rroxscaffold_4G00316290
rosa_rugosa Rorug07G0318400 Rorug07G0318400 Rorug07G0318600
rosa_samantha Rh4CG066500 Rh5DG444300 Rh7AG473700 Rh7AG473900 Rh7AG474000 Rh7AG474600 Rh7AG474800 Rh7BG444500 Rh7BG444700 Rh7CG490700 Rh7CG490800 Rh7CG491000 Rh7DG458900 Rh7DG459000 Rh7DG459300
rosa_wichuraiana Rw7G038970 Rw7G039050 Rw7G039420 Rw7G039480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1251
AasI GACNNNNNNGTC 1 cut(s) 926
AccB1I GGYRCC 1 cut(s) 1144
AccB7I CCANNNNNTGG 1 cut(s) 828
AccII CGCG 2 cut(s) 120, 282
AccIII TCCGGA 1 cut(s) 1876
AciI CCGC 4 cut(s) 43, 218, 635, 1203
AclWI GGATC 6 cut(s) 241, 626, 639, 803, 1796, 2179
AcoI YGGCCR 2 cut(s) 29, 1997
AcsI RAATTY 5 cut(s) 1108, 1124, 1363, 1560, 1662
AcyI GRCGYC 1 cut(s) 51
AfaI GTAC 8 cut(s) 227, 338, 502, 699, 885, 903, 1767, 1824
AfiI CCNNNNNNNGG 3 cut(s) 828, 1021, 1832
AflIII ACRYGT 2 cut(s) 904, 2354
AgeI ACCGGT 1 cut(s) 457
AhlI ACTAGT 1 cut(s) 1328
AjnI CCWGG 8 cut(s) 673, 827, 874, 1147, 1300, 1483, 1551, 2091
AloI GAACNNNNNNTCC 2 cut(s) 2069, 2101
Alw21I GWGCWC 4 cut(s) 87, 569, 1342, 1421
Alw26I GTCTC 5 cut(s) 1022, 1488, 1733, 1957, 2287
AlwI GGATC 6 cut(s) 241, 626, 639, 803, 1796, 2179
AlwNI CAGNNNCTG 1 cut(s) 828
Aor13HI TCCGGA 1 cut(s) 1876
AoxI GGCC 4 cut(s) 29, 488, 861, 1997
ApeKI GCWGC 1 cut(s) 2101
ApoI RAATTY 5 cut(s) 1108, 1124, 1363, 1560, 1662
AsiGI ACCGGT 1 cut(s) 457
Asp700I GAANNNNTTC 1 cut(s) 2208
AspA2I CCTAGG 1 cut(s) 1732
AspS9I GGNCC 3 cut(s) 215, 776, 861
AsuC2I CCSGG 2 cut(s) 47, 1023
AsuHPI GGTGA 2 cut(s) 935, 2179
AsuNHI GCTAGC 1 cut(s) 1532
AvaII GGWCC 2 cut(s) 215, 776
AvrII CCTAGG 1 cut(s) 1732
BalI TGGCCA 1 cut(s) 1999
BamHI GGATCC 1 cut(s) 631
BanI GGYRCC 1 cut(s) 1144
BanII GRGCYC 3 cut(s) 87, 569, 1421
BbsI GAAGAC 3 cut(s) 251, 924, 999
Bbv12I GWGCWC 4 cut(s) 87, 569, 1342, 1421
BbvI GCAGC 1 cut(s) 2113
BceAI ACGGC 2 cut(s) 80, 1158
BciT130I CCWGG 8 cut(s) 675, 829, 876, 1149, 1302, 1485, 1553, 2093
BciVI GTATCC 1 cut(s) 879
BclI TGATCA 1 cut(s) 649
BcnI CCSGG 2 cut(s) 47, 1023
BcoDI GTCTC 5 cut(s) 1022, 1488, 1733, 1957, 2287
BcuI ACTAGT 1 cut(s) 1328
BfaI CTAG 8 cut(s) 68, 965, 1044, 1269, 1314, 1329, 1533, 1733
BfmI CTRYAG 2 cut(s) 888, 1723
BfuI GTATCC 1 cut(s) 879
BglI GCCNNNNNGGC 1 cut(s) 496
BisI GCNGC 2 cut(s) 43, 2102
BlnI CCTAGG 1 cut(s) 1732
BlpI GCTNAGC 1 cut(s) 1710
BlsI GCNGC 2 cut(s) 44, 2103
Bme18I GGWCC 2 cut(s) 215, 776
BmgT120I GGNCC 3 cut(s) 215, 776, 861
BmiI GGNNCC 3 cut(s) 633, 778, 1146
BmsI GCATC 3 cut(s) 472, 1845, 2009
BmtI GCTAGC 1 cut(s) 1536
BpiI GAAGAC 3 cut(s) 251, 924, 999
BplI GAGNNNNNCTC 4 cut(s) 95, 127, 2088, 2120
BpmI CTGGAG 3 cut(s) 242, 858, 1323
Bpu10I CCTNAGC 2 cut(s) 1341, 1420
Bpu1102I GCTNAGC 1 cut(s) 1710
BpuEI CTTGAG 2 cut(s) 1736, 2269
BpuMI CCSGG 2 cut(s) 47, 1023
BsaAI YACGTR 2 cut(s) 572, 1765
BsaBI GATNNNNATC 2 cut(s) 630, 972
BsaHI GRCGYC 1 cut(s) 51
BsaI GGTCTC 1 cut(s) 1957
BsaJI CCNNGG 7 cut(s) 55, 1022, 1412, 1551, 1732, 1826, 2092
BsaWI WCCGGW 2 cut(s) 457, 1876
BsaXI ACNNNNNCTCC 4 cut(s) 254, 284, 556, 586
Bsc4I CCNNNNNNNGG 3 cut(s) 828, 1021, 1832
Bse118I RCCGGY 1 cut(s) 457
Bse1I ACTGG 4 cut(s) 475, 822, 1610, 1686
Bse3DI GCAATG 1 cut(s) 175
Bse8I GATNNNNATC 2 cut(s) 630, 972
BseAI TCCGGA 1 cut(s) 1876
BseBI CCWGG 8 cut(s) 675, 829, 876, 1149, 1302, 1485, 1553, 2093
BseDI CCNNGG 7 cut(s) 55, 1022, 1412, 1551, 1732, 1826, 2092
BseGI GGATG 6 cut(s) 376, 1055, 1390, 1837, 2128, 2284
BseJI GATNNNNATC 2 cut(s) 630, 972
BseLI CCNNNNNNNGG 3 cut(s) 828, 1021, 1832
BseMI GCAATG 1 cut(s) 175
BseMII CTCAG 5 cut(s) 1272, 1355, 1434, 1701, 2169
BseNI ACTGG 4 cut(s) 475, 822, 1610, 1686
BseRI GAGGAG 1 cut(s) 105
BseXI GCAGC 1 cut(s) 2113
BseYI CCCAGC 1 cut(s) 1946
Bsh1236I CGCG 2 cut(s) 120, 282
BshFI GGCC 4 cut(s) 31, 490, 863, 1999
BshNI GGYRCC 1 cut(s) 1144
BshTI ACCGGT 1 cut(s) 457
BsiHKAI GWGCWC 4 cut(s) 87, 569, 1342, 1421
BsiSI CCGG 5 cut(s) 28, 47, 458, 1022, 1877
BslFI GGGAC 2 cut(s) 762, 2298
BslI CCNNNNNNNGG 3 cut(s) 828, 1021, 1832
BsmAI GTCTC 5 cut(s) 1022, 1488, 1733, 1957, 2287
BsmBI CGTCTC 1 cut(s) 1022
BsmFI GGGAC 2 cut(s) 762, 2298
BsmI GAATGC 1 cut(s) 1013
BsnI GGCC 4 cut(s) 31, 490, 863, 1999
Bso31I GGTCTC 1 cut(s) 1957
Bsp1286I GDGCHC 4 cut(s) 87, 569, 1342, 1421
Bsp13I TCCGGA 1 cut(s) 1876
Bsp1407I TGTACA 1 cut(s) 336
Bsp1720I GCTNAGC 1 cut(s) 1710
Bsp68I TCGCGA 1 cut(s) 120
BspACI CCGC 4 cut(s) 43, 218, 635, 1203
BspANI GGCC 4 cut(s) 31, 490, 863, 1999
BspCNI CTCAG 5 cut(s) 1271, 1354, 1433, 1702, 2168
BspEI TCCGGA 1 cut(s) 1876
BspFNI CGCG 2 cut(s) 120, 282
BspHI TCATGA 1 cut(s) 1641
BspLI GGNNCC 3 cut(s) 633, 778, 1146
BspOI GCTAGC 1 cut(s) 1536
BspPI GGATC 6 cut(s) 241, 626, 639, 803, 1796, 2179
BspQI GCTCTTC 1 cut(s) 168
BspT107I GGYRCC 1 cut(s) 1144
BspTNI GGTCTC 1 cut(s) 1957
BsrDI GCAATG 1 cut(s) 175
BsrFI RCCGGY 1 cut(s) 457
BsrGI TGTACA 1 cut(s) 336
BsrI ACTGG 4 cut(s) 475, 822, 1610, 1686
BssAI RCCGGY 1 cut(s) 457
BssECI CCNNGG 7 cut(s) 55, 1022, 1412, 1551, 1732, 1826, 2092
BssNI GRCGYC 1 cut(s) 51
BssT1I CCWWGG 3 cut(s) 1412, 1732, 1826
Bst2UI CCWGG 8 cut(s) 675, 829, 876, 1149, 1302, 1485, 1553, 2093
Bst4CI ACNGT 9 cut(s) 215, 250, 695, 901, 923, 1061, 1727, 2056, 2195
Bst6I CTCTTC 4 cut(s) 168, 420, 874, 1383
BstACI GRCGYC 1 cut(s) 51
BstAPI GCANNNNNTGC 3 cut(s) 491, 1520, 1529
BstAUI TGTACA 1 cut(s) 336
BstBAI YACGTR 2 cut(s) 572, 1765
BstC8I GCNNGC 4 cut(s) 130, 292, 492, 1534
BstDEI CTNAG 8 cut(s) 1113, 1258, 1341, 1369, 1420, 1710, 2080, 2155
BstF5I GGATG 6 cut(s) 376, 1055, 1390, 1837, 2128, 2284
BstFNI CGCG 2 cut(s) 120, 282
BstMAI GTCTC 5 cut(s) 1022, 1488, 1733, 1957, 2287
BstMWI GCNNNNNNNGC 7 cut(s) 138, 491, 496, 961, 1520, 1529, 1623
BstNI CCWGG 8 cut(s) 675, 829, 876, 1149, 1302, 1485, 1553, 2093
BstNSI RCATGY 3 cut(s) 806, 908, 1518
BstSFI CTRYAG 2 cut(s) 888, 1723
BstUI CGCG 2 cut(s) 120, 282
BstV1I GCAGC 1 cut(s) 2113
BstV2I GAAGAC 3 cut(s) 251, 924, 999
BstX2I RGATCY 1 cut(s) 631
BstXI CCANNNNNNTGG 3 cut(s) 762, 788, 1381
BstYI RGATCY 1 cut(s) 631
BsuI GTATCC 1 cut(s) 879
BsuRI GGCC 4 cut(s) 31, 490, 863, 1999
BtgZI GCGATG 1 cut(s) 297
BtsCI GGATG 6 cut(s) 376, 1055, 1390, 1837, 2128, 2284
BtsI GCAGTG 2 cut(s) 154, 962
BtsIMutI CAGTG 7 cut(s) 154, 206, 468, 700, 829, 962, 1057
BtuMI TCGCGA 1 cut(s) 120
Cac8I GCNNGC 4 cut(s) 130, 292, 492, 1534
CaiI CAGNNNCTG 1 cut(s) 828
CciI TCATGA 1 cut(s) 1641
Cfr10I RCCGGY 1 cut(s) 457
Cfr13I GGNCC 3 cut(s) 215, 776, 861
CpoI CGGWCCG 1 cut(s) 215
CseI GACGC 1 cut(s) 59
CsiI ACCWGGT 1 cut(s) 1147
Csp6I GTAC 8 cut(s) 226, 337, 501, 698, 884, 902, 1766, 1823
CspAI ACCGGT 1 cut(s) 457
CspCI CAANNNNNGTGG 2 cut(s) 168, 203
CspI CGGWCCG 1 cut(s) 215
CviQI GTAC 8 cut(s) 226, 337, 501, 698, 884, 902, 1766, 1823
DdeI CTNAG 8 cut(s) 1113, 1258, 1341, 1369, 1420, 1710, 2080, 2155
DrdI GACNNNNNNGTC 1 cut(s) 926
DseDI GACNNNNNNGTC 1 cut(s) 926
EaeI YGGCCR 2 cut(s) 29, 1997
Eam1104I CTCTTC 4 cut(s) 168, 420, 874, 1383
EarI CTCTTC 4 cut(s) 168, 420, 874, 1383
Ecl136II GAGCTC 3 cut(s) 85, 567, 1419
Eco130I CCWWGG 3 cut(s) 1412, 1732, 1826
Eco24I GRGCYC 3 cut(s) 87, 569, 1421
Eco31I GGTCTC 1 cut(s) 1957
Eco47I GGWCC 2 cut(s) 215, 776
Eco53kI GAGCTC 3 cut(s) 85, 567, 1419
EcoICRI GAGCTC 3 cut(s) 85, 567, 1419
EcoRII CCWGG 8 cut(s) 673, 827, 874, 1147, 1300, 1483, 1551, 2091
EcoT14I CCWWGG 3 cut(s) 1412, 1732, 1826
EcoT22I ATGCAT 1 cut(s) 487
EcoT38I GRGCYC 3 cut(s) 87, 569, 1421
ErhI CCWWGG 3 cut(s) 1412, 1732, 1826
Esp3I CGTCTC 1 cut(s) 1022
FaqI GGGAC 2 cut(s) 762, 2298
FbaI TGATCA 1 cut(s) 649
Fnu4HI GCNGC 2 cut(s) 43, 2102
FokI GGATG 6 cut(s) 383, 1062, 1397, 1844, 2115, 2291
FriOI GRGCYC 3 cut(s) 87, 569, 1421
Fsp4HI GCNGC 2 cut(s) 43, 2102
FspBI CTAG 8 cut(s) 68, 965, 1044, 1269, 1314, 1329, 1533, 1733
GluI GCNGC 2 cut(s) 43, 2102
GsaI CCCAGC 1 cut(s) 1950
GsuI CTGGAG 3 cut(s) 242, 858, 1323
HaeIII GGCC 4 cut(s) 31, 490, 863, 1999
HapII CCGG 5 cut(s) 28, 47, 458, 1022, 1877
HgaI GACGC 1 cut(s) 59
Hin1I GRCGYC 1 cut(s) 51
HincII GTYRAC 1 cut(s) 1744
HindII GTYRAC 1 cut(s) 1744
HindIII AAGCTT 1 cut(s) 1466
HinfI GANTC 6 cut(s) 318, 323, 1214, 1284, 1547, 1964
HpaII CCGG 5 cut(s) 28, 47, 458, 1022, 1877
HphI GGTGA 2 cut(s) 935, 2179
Hpy166II GTNNAC 3 cut(s) 698, 910, 1744
Hpy8I GTNNAC 3 cut(s) 698, 910, 1744
Hpy99I CGWCG 2 cut(s) 83, 125
HpyCH4III ACNGT 9 cut(s) 215, 250, 695, 901, 923, 1061, 1727, 2056, 2195
HpyCH4IV ACGT 5 cut(s) 123, 571, 1764, 1773, 2354
HpyF10VI GCNNNNNNNGC 7 cut(s) 138, 491, 496, 961, 1520, 1529, 1623
HpyF3I CTNAG 8 cut(s) 1113, 1258, 1341, 1369, 1420, 1710, 2080, 2155
HpySE526I ACGT 5 cut(s) 123, 571, 1764, 1773, 2354
Hsp92I GRCGYC 1 cut(s) 51
Kpn2I TCCGGA 1 cut(s) 1876
Ksp22I TGATCA 1 cut(s) 649
LguI GCTCTTC 1 cut(s) 168
LmnI GCTCC 4 cut(s) 564, 1416, 1511, 2109
Lsp1109I GCAGC 1 cut(s) 2113
LweI GCATC 3 cut(s) 472, 1845, 2009
MabI ACCWGGT 1 cut(s) 1147
MaeI CTAG 8 cut(s) 68, 965, 1044, 1269, 1314, 1329, 1533, 1733
MaeII ACGT 5 cut(s) 123, 571, 1764, 1773, 2354
MaeIII GTNAC 5 cut(s) 895, 1090, 2058, 2108, 2339
MfeI CAATTG 1 cut(s) 1426
MflI RGATCY 1 cut(s) 631
MhlI GDGCHC 4 cut(s) 87, 569, 1342, 1421
MlsI TGGCCA 1 cut(s) 1999
MluNI TGGCCA 1 cut(s) 1999
MlyI GAGTC 2 cut(s) 317, 1293
MmeI TCCRAC 3 cut(s) 968, 1456, 1613
Mox20I TGGCCA 1 cut(s) 1999
Mph1103I ATGCAT 1 cut(s) 487
MroI TCCGGA 1 cut(s) 1876
MroXI GAANNNNTTC 1 cut(s) 2208
MscI TGGCCA 1 cut(s) 1999
MseI TTAA 5 cut(s) 201, 2045, 2139, 2298, 2359
MslI CAYNNNNRTG 3 cut(s) 760, 841, 1016
Msp20I TGGCCA 1 cut(s) 1999
MspA1I CMGCKG 2 cut(s) 220, 1979
MspI CCGG 5 cut(s) 28, 47, 458, 1022, 1877
MunI CAATTG 1 cut(s) 1426
Mva1269I GAATGC 1 cut(s) 1013
MvaI CCWGG 8 cut(s) 675, 829, 876, 1149, 1302, 1485, 1553, 2093
MvnI CGCG 2 cut(s) 120, 282
MwoI GCNNNNNNNGC 7 cut(s) 138, 491, 496, 961, 1520, 1529, 1623
NciI CCSGG 2 cut(s) 47, 1023
NheI GCTAGC 1 cut(s) 1532
NlaIV GGNNCC 3 cut(s) 633, 778, 1146
NmuCI GTSAC 2 cut(s) 895, 2058
NruI TCGCGA 1 cut(s) 120
NsiI ATGCAT 1 cut(s) 487
NspI RCATGY 3 cut(s) 806, 908, 1518
PagI TCATGA 1 cut(s) 1641
PciI ACATGT 1 cut(s) 904
PciSI GCTCTTC 1 cut(s) 168
PcsI WCGNNNNNNNCGW 1 cut(s) 1770
PctI GAATGC 1 cut(s) 1013
PdmI GAANNNNTTC 1 cut(s) 2208
PfeI GAWTC 4 cut(s) 318, 1214, 1547, 1964
PflMI CCANNNNNTGG 1 cut(s) 828
PfoI TCCNGGA 1 cut(s) 874
PinAI ACCGGT 1 cut(s) 457
PkrI GCNGC 2 cut(s) 44, 2103
PleI GAGTC 2 cut(s) 317, 1292
PpsI GAGTC 2 cut(s) 317, 1292
Ppu21I YACGTR 2 cut(s) 572, 1765
PscI ACATGT 1 cut(s) 904
PsiI TTATAA 1 cut(s) 1251
Psp124BI GAGCTC 3 cut(s) 87, 569, 1421
Psp6I CCWGG 8 cut(s) 673, 827, 874, 1147, 1300, 1483, 1551, 2091
PspFI CCCAGC 1 cut(s) 1946
PspGI CCWGG 8 cut(s) 673, 827, 874, 1147, 1300, 1483, 1551, 2091
PspN4I GGNNCC 3 cut(s) 633, 778, 1146
PspPI GGNCC 3 cut(s) 215, 776, 861
PstNI CAGNNNCTG 1 cut(s) 828
PsuI RGATCY 1 cut(s) 631
PvuII CAGCTG 1 cut(s) 1979
RruI TCGCGA 1 cut(s) 120
RsaI GTAC 8 cut(s) 227, 338, 502, 699, 885, 903, 1767, 1824
RsaNI GTAC 8 cut(s) 226, 337, 501, 698, 884, 902, 1766, 1823
RseI CAYNNNNRTG 3 cut(s) 760, 841, 1016
Rsr2I CGGWCCG 1 cut(s) 215
RsrII CGGWCCG 1 cut(s) 215
SacI GAGCTC 3 cut(s) 87, 569, 1421
SapI GCTCTTC 1 cut(s) 168
SaqAI TTAA 5 cut(s) 201, 2045, 2139, 2298, 2359
SatI GCNGC 2 cut(s) 43, 2102
Sau96I GGNCC 3 cut(s) 215, 776, 861
SchI GAGTC 2 cut(s) 317, 1293
SduI GDGCHC 4 cut(s) 87, 569, 1342, 1421
SexAI ACCWGGT 1 cut(s) 1147
SfaNI GCATC 3 cut(s) 472, 1845, 2009
SfcI CTRYAG 2 cut(s) 888, 1723
SinI GGWCC 2 cut(s) 215, 776
SmiMI CAYNNNNRTG 3 cut(s) 760, 841, 1016
SmlI CTYRAG 2 cut(s) 1715, 2284
SmoI CTYRAG 2 cut(s) 1715, 2284
SpeI ACTAGT 1 cut(s) 1328
SsiI CCGC 4 cut(s) 43, 218, 635, 1203
SspI AATATT 1 cut(s) 934
SspMI CTAG 8 cut(s) 68, 965, 1044, 1269, 1314, 1329, 1533, 1733
SstI GAGCTC 3 cut(s) 87, 569, 1421
StyI CCWWGG 3 cut(s) 1412, 1732, 1826
TaaI ACNGT 9 cut(s) 215, 250, 695, 901, 923, 1061, 1727, 2056, 2195
TaiI ACGT 5 cut(s) 126, 574, 1767, 1776, 2357
TaqI TCGA 1 cut(s) 321
TatI WGTACW 3 cut(s) 225, 336, 901
TauI GCSGC 1 cut(s) 45
TfiI GAWTC 4 cut(s) 318, 1214, 1547, 1964
Tru1I TTAA 5 cut(s) 201, 2045, 2139, 2298, 2359
Tru9I TTAA 5 cut(s) 201, 2045, 2139, 2298, 2359
TscAI CASTG 7 cut(s) 154, 213, 475, 700, 829, 962, 1064
TseFI GTSAC 2 cut(s) 895, 2058
TseI GCWGC 1 cut(s) 2101
Tsp45I GTSAC 2 cut(s) 895, 2058
TspDTI ATGAA 9 cut(s) 186, 291, 594, 626, 1005, 1212, 1401, 2085, 2239
TspGWI ACGGA 1 cut(s) 2096
TspRI CASTG 7 cut(s) 154, 213, 475, 700, 829, 962, 1064
Van91I CCANNNNNTGG 1 cut(s) 828
VpaK11BI GGWCC 2 cut(s) 215, 776
XapI RAATTY 5 cut(s) 1108, 1124, 1363, 1560, 1662
XceI RCATGY 3 cut(s) 806, 908, 1518
XcmI CCANNNNNNNNNTGG 1 cut(s) 2197
XmaJI CCTAGG 1 cut(s) 1732
XmnI GAANNNNTTC 1 cut(s) 2208
XspI CTAG 8 cut(s) 68, 965, 1044, 1269, 1314, 1329, 1533, 1733
Zsp2I ATGCAT 1 cut(s) 487
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.