Rmu_sc0001036.1_g000032

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001036.1
OG0000630
Physical Location & Seq
Forward (+)
130624 .. 138071
7448 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001036.1_g000032.1.cds

Sequence Viewer

Length: 2871 bp
atggaggtttccgaagcccctctcttccggccaagagatcgccggccggacgccctcggaaacttcctagtcctccccgacgagctcatctgtgccatcttggaattgctttctcctcgcgactttgctcgcctctcatgcgttagcagcgagaatgtgtcgtatgagcgcgatgaggcttgcagaaaaccattgagttttgatggattcgactctttgttcttgtacagaagattatacaggtgtcataccacattggatggtttttcttttgacaatgggaatgtggaaagaaaggacaagatcacagtggaagagtgttcttgtgactatgatggaaagaaaccgaattatggagatacagctttcaagatttctcaaaggagctcacgtaaaatctcaatgacattcaagggttatgtttcatatatgaaggttcagcatgatgaggatccgctttatatctttgatcacaagtttggagaggttgaacctggcttgttgaaagattacagtgtaccttatctatttcaagaggacttttttgatgttttggacaaagataagcgacctccatttagatggctctttattggtccccagaggtctggtgcttcttggcatgttgatccagctctgaccagtgcctggaatacacttctatgtggttgtaaaaggtgggccttgtatcctccaggaagagtacctataggtgtcacagtacatgtaaacgaagaagacggtgatgtcaatattgaaactccaacttcattgcagtggtggctagatttttatccacttcttgctgatgaagacaagcccatagagtgcacccaaatgccgggggagacgattttcgttcctagtggatggtggcactgtgtcctaaatcttgaaccatctattgctgttacccagaactttgtaaattctaagaactttgaatttgtgtgcttggatatggcacctggttatcgtcataagggagtttgccatgctggattacttgcagatgatgaaggcagtattgaggattccacaaatcatatactctatgataaagatgattataattcctcagatatgactaggaaagtaaaaagagtcagaactctcaaacctggagaatatccaagtagtgaaagaactagtaatgctgctcagggtttttcttatgatgtaaatttcttagccatgtatctggatgaagagagagatcattacagctctccttggagctcaggcaattgcatagggcaacgagaaatgagagaatggttattcaagctttgggttggaaaaccaggaatgagagacttgatctggaagggagcatgtctcgcactaaatgctagcaaatggtcagaatccctggcagaaatttgtgccttccacaaattgccttctccaacagatgatgagaggcttccagttggcacgggtagcaatcctgtttatgtcatgagcaactgtgtaatcaaaatttttgttgaggaaggactggaaacgtcactttatggattgggtgctgagcttgagttctacagtctcctaggcaaagtcaactcccctctgaaaaatcacatacctgacgttttggcaagtgggatcatttatcttgaaaatggaacgtataaaattgtaccttgggatggcatcagagttcctgatgtgattgctaagtgcaattttattccggagaaggtcaaaggagatgtttctccttttggtgtatggaggaagaaacaatttgaatacagaaaagctggggtatcaacaaacgaatccatcagttcagctgaatatacaaggatatggccatatctcataacaaaacgatgcaaaggaaaaatatatgcagagttaagagatactgtgtcacgggaagatgaactgaacttagcttccttcctgggagagcagctccgtaacctccatctcttgccccatccacctcttaatatctcaactttcttagatattgaacaggaatcagattttcccttcaccaacggtagtatggaagctgttccccataaatcaaacattcctgctgaatgggatatattcattagaactctatccaagaagaagaaggatgtcccaagtcgcttgattaaatggggagatccaattcctagcacactcatagagaaagttgacaaatacatcccagatgattttgccaagtttctgtacatgttcaaggatgaaaatggtgtaagcaaagttggtaaaagttgttcgtggatacactctgatatcatggatgacaacattcacatggaactatgtggttttaattcttgcttcattggcaacgacaaaaacacttgcctggtaaataatggttcctggaatgttgatggtgaccgtgcagagaggaaaacatggtgccctagccacattctagattttagtaatctttctataggtgatcccatctatgatttgatacccttatacttggatatattcagaggtgattgctacctccttaagcaatttctagatagttataaacttcctttagtaagacaagcgtcacctcatgagtatatggagggtggcgacaagtttggacgactttcctaccatgccattctctgggacgaactcaagatggcaaaatcatgggaagaagttgaacaggttgtatggggcgagctaaatagctacaaaggctttcctggatcatccacatctctctctttgttggagccgaaaactccctcaacaagtcaacattccttagggatggaaaaaatccccagcggggcggagctccattggatacccgcccctaatggggggagaattcagggacaaatggggaatggggatggtgatgcgctcttgggaagcgcataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
APH Cupin_8 F-box F-box-like JmjC

Protein Analysis

956

Amino Acids

108.65

Weight (kDa)

5.27

Isoelectric Point (pI)

43.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000630)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78280
fragaria_vesca FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800 FvH4_5g36800
malus_domestica MD08G1186800.v1.1 MD15G1372700.v1.1
prunus_persica Prupe.1G521300_v2.0.a1 Prupe.1G521300_v2.0.a1
pyrus_communis pycom08g16060 pycom15g33370
rosa_chinensis RchiOBHm_Chr2g0139391 RchiOBHm_Chr7g0242931 RchiOBHm_Chr7g0242951 RchiOBHm_Chr7g0243001 RchiOBHm_Chr7g0243011 RchiOBHm_Chr7g0243141 RchiOBHm_Chr7g0243151 RchiOBHm_Chr7g0243351
rosa_laevigata RLG00000000853 RLG00000000857 RLG00000000858 RLG00000000863 RLG00000000867
rosa_multiflora Rmu_co8457323.1_g000001 Rmu_sc0000083.1_g000017 Rmu_sc0000679.1_g000021 Rmu_sc0001036.1_g000029 Rmu_sc0001036.1_g000032 Rmu_sc0001176.1_g000015 Rmu_sc0001461.1_g000002 Rmu_sc0001461.1_g000003 Rmu_sc0001461.1_g000056 Rmu_sc0001461.1_g000057 Rmu_sc0001461.1_g000098 Rmu_sc0001461.1_g000105 Rmu_sc0004165.1_g000084 Rmu_sc0006141.1_g000004 Rmu_sc0033806.1_g000001
rosa_roxburghii Rroxscaffold_3G00222160 Rroxscaffold_3G00222220 Rroxscaffold_4G00316290
rosa_rugosa Rorug07G0318400 Rorug07G0318400 Rorug07G0318600
rosa_samantha Rh4CG066500 Rh5DG444300 Rh7AG473700 Rh7AG473900 Rh7AG474000 Rh7AG474600 Rh7AG474800 Rh7BG444500 Rh7BG444700 Rh7CG490700 Rh7CG490800 Rh7CG491000 Rh7DG458900 Rh7DG459000 Rh7DG459300
rosa_wichuraiana Rw7G038970 Rw7G039050 Rw7G039420 Rw7G039480

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1071, 2520
AasI GACNNNNNNGTC 1 cut(s) 746
AccB1I GGYRCC 2 cut(s) 964, 2394
AccB7I CCANNNNNTGG 2 cut(s) 648, 2607
AccII CGCG 2 cut(s) 120, 171
AccIII TCCGGA 1 cut(s) 1696
AciI CCGC 4 cut(s) 455, 2775, 2780, 2799
AclWI GGATC 7 cut(s) 446, 459, 623, 1616, 2123, 2432, 2701
AcoI YGGCCR 3 cut(s) 29, 44, 1817
AcsI RAATTY 6 cut(s) 928, 944, 1183, 1380, 1482, 2817
AcyI GRCGYC 1 cut(s) 51
AfaI GTAC 6 cut(s) 227, 519, 705, 723, 1644, 2198
AfiI CCNNNNNNNGG 9 cut(s) 353, 648, 841, 1652, 2607, 2776, 2808, 2809, 2810
AflII CTTAAG 1 cut(s) 2498
AflIII ACRYGT 2 cut(s) 724, 2199
AhlI ACTAGT 1 cut(s) 1148
AloI GAACNNNNNNTCC 2 cut(s) 1889, 1921
Alw21I GWGCWC 5 cut(s) 87, 389, 833, 1241, 2787
Alw26I GTCTC 4 cut(s) 842, 1308, 1343, 1553
Alw44I GTGCAC 1 cut(s) 829
AlwI GGATC 7 cut(s) 446, 459, 623, 1616, 2123, 2432, 2701
AlwNI CAGNNNCTG 1 cut(s) 648
Aor13HI TCCGGA 1 cut(s) 1696
AoxI GGCC 4 cut(s) 29, 44, 681, 1817
ApaLI GTGCAC 1 cut(s) 829
ApeKI GCWGC 3 cut(s) 147, 1157, 1921
ApoI RAATTY 6 cut(s) 928, 944, 1183, 1380, 1482, 2817
Asp700I GAANNNNTTC 1 cut(s) 2028
AspA2I CCTAGG 1 cut(s) 1552
AspLEI GCGC 3 cut(s) 171, 2854, 2867
AspS9I GGNCC 2 cut(s) 596, 681
AsuC2I CCSGG 1 cut(s) 843
AsuHPI GGTGA 7 cut(s) 755, 1999, 2381, 2447, 2495, 2538, 2858
AsuNHI GCTAGC 1 cut(s) 1352
AvaII GGWCC 1 cut(s) 596
AvrII CCTAGG 1 cut(s) 1552
AxyI CCTNAGG 1 cut(s) 2752
BaeGI GKGCMC 2 cut(s) 833, 2399
BalI TGGCCA 1 cut(s) 1819
BamHI GGATCC 1 cut(s) 451
BanI GGYRCC 2 cut(s) 964, 2394
BanII GRGCYC 4 cut(s) 87, 389, 1241, 2787
BbsI GAAGAC 2 cut(s) 744, 819
Bbv12I GWGCWC 5 cut(s) 87, 389, 833, 1241, 2787
BbvI GCAGC 3 cut(s) 159, 1144, 1933
BciVI GTATCC 3 cut(s) 699, 2244, 2787
BclI TGATCA 1 cut(s) 469
BcnI CCSGG 1 cut(s) 843
BcoDI GTCTC 4 cut(s) 842, 1308, 1343, 1553
BcuI ACTAGT 1 cut(s) 1148
BfmI CTRYAG 3 cut(s) 708, 1543, 2430
BfrI CTTAAG 1 cut(s) 2498
BfuI GTATCC 3 cut(s) 699, 2244, 2787
BisI GCNGC 3 cut(s) 148, 1158, 1922
BlnI CCTAGG 1 cut(s) 1552
BlpI GCTNAGC 1 cut(s) 1530
BlsI GCNGC 3 cut(s) 149, 1159, 1923
Bme18I GGWCC 1 cut(s) 596
BmgT120I GGNCC 2 cut(s) 596, 681
BmiI GGNNCC 6 cut(s) 453, 598, 966, 2353, 2396, 2721
BmsI GCATC 3 cut(s) 1665, 1829, 2839
BmtI GCTAGC 1 cut(s) 1356
BoxI GACNNNNGTC 1 cut(s) 2542
BpiI GAAGAC 2 cut(s) 744, 819
BplI GAGNNNNNCTC 4 cut(s) 1323, 1355, 1908, 1940
BpmI CTGGAG 2 cut(s) 678, 1143
Bpu10I CCTNAGC 2 cut(s) 1161, 1240
Bpu1102I GCTNAGC 1 cut(s) 1530
BpuEI CTTGAG 2 cut(s) 1556, 2603
BpuMI CCSGG 1 cut(s) 843
BsaAI YACGTR 1 cut(s) 392
BsaBI GATNNNNATC 2 cut(s) 450, 792
BsaHI GRCGYC 1 cut(s) 51
BsaJI CCNNGG 7 cut(s) 55, 842, 1232, 1371, 1552, 1646, 1912
BsaWI WCCGGW 1 cut(s) 1696
BsaXI ACNNNNNCTCC 2 cut(s) 376, 406
Bsc4I CCNNNNNNNGG 9 cut(s) 353, 648, 841, 1652, 2607, 2776, 2808, 2809, 2810
Bse118I RCCGGY 1 cut(s) 42
Bse1I ACTGG 3 cut(s) 642, 1430, 1506
Bse21I CCTNAGG 1 cut(s) 2752
Bse3DI GCAATG 1 cut(s) 770
Bse8I GATNNNNATC 2 cut(s) 450, 792
BseAI TCCGGA 1 cut(s) 1696
BseDI CCNNGG 7 cut(s) 55, 842, 1232, 1371, 1552, 1646, 1912
BseJI GATNNNNATC 2 cut(s) 450, 792
BseLI CCNNNNNNNGG 9 cut(s) 353, 648, 841, 1652, 2607, 2776, 2808, 2809, 2810
BseMI GCAATG 1 cut(s) 770
BseMII CTCAG 4 cut(s) 1092, 1175, 1254, 1521
BseNI ACTGG 3 cut(s) 642, 1430, 1506
BseRI GAGGAG 1 cut(s) 105
BseSI GKGCMC 2 cut(s) 833, 2399
BseX3I CGGCCG 1 cut(s) 44
BseXI GCAGC 3 cut(s) 159, 1144, 1933
BseYI CCCAGC 2 cut(s) 1766, 2771
BsgI GTGCAG 1 cut(s) 2397
Bsh1236I CGCG 2 cut(s) 120, 171
Bsh1285I CGRYCG 1 cut(s) 47
BshFI GGCC 4 cut(s) 31, 46, 683, 1819
BshNI GGYRCC 2 cut(s) 964, 2394
BsiEI CGRYCG 1 cut(s) 47
BsiHKAI GWGCWC 5 cut(s) 87, 389, 833, 1241, 2787
BsiSI CCGG 5 cut(s) 28, 43, 47, 842, 1697
BslFI GGGAC 4 cut(s) 582, 2087, 2624, 2838
BslI CCNNNNNNNGG 9 cut(s) 353, 648, 841, 1652, 2607, 2776, 2808, 2809, 2810
BsmAI GTCTC 4 cut(s) 842, 1308, 1343, 1553
BsmBI CGTCTC 1 cut(s) 842
BsmFI GGGAC 4 cut(s) 582, 2087, 2624, 2838
BsnI GGCC 4 cut(s) 31, 46, 683, 1819
Bsp1286I GDGCHC 6 cut(s) 87, 389, 833, 1241, 2399, 2787
Bsp13I TCCGGA 1 cut(s) 1696
Bsp1407I TGTACA 2 cut(s) 225, 2196
Bsp1720I GCTNAGC 1 cut(s) 1530
Bsp68I TCGCGA 1 cut(s) 120
BspACI CCGC 4 cut(s) 455, 2775, 2780, 2799
BspANI GGCC 4 cut(s) 31, 46, 683, 1819
BspCNI CTCAG 4 cut(s) 1091, 1174, 1253, 1522
BspEI TCCGGA 1 cut(s) 1696
BspFNI CGCG 2 cut(s) 120, 171
BspHI TCATGA 2 cut(s) 1461, 2551
BspLI GGNNCC 6 cut(s) 453, 598, 966, 2353, 2396, 2721
BspOI GCTAGC 1 cut(s) 1356
BspPI GGATC 7 cut(s) 446, 459, 623, 1616, 2123, 2432, 2701
BspT107I GGYRCC 2 cut(s) 964, 2394
BspTI CTTAAG 1 cut(s) 2498
BsrDI GCAATG 1 cut(s) 770
BsrFI RCCGGY 1 cut(s) 42
BsrGI TGTACA 2 cut(s) 225, 2196
BsrI ACTGG 3 cut(s) 642, 1430, 1506
BssAI RCCGGY 1 cut(s) 42
BssECI CCNNGG 7 cut(s) 55, 842, 1232, 1371, 1552, 1646, 1912
BssNI GRCGYC 1 cut(s) 51
BssT1I CCWWGG 3 cut(s) 1232, 1552, 1646
Bst6I CTCTTC 4 cut(s) 29, 309, 694, 1203
BstACI GRCGYC 1 cut(s) 51
BstAFI CTTAAG 1 cut(s) 2498
BstAPI GCANNNNNTGC 1 cut(s) 1349
BstAUI TGTACA 2 cut(s) 225, 2196
BstBAI YACGTR 1 cut(s) 392
BstC8I GCNNGC 5 cut(s) 44, 130, 181, 1354, 2666
BstEII GGTNACC 1 cut(s) 2369
BstFNI CGCG 2 cut(s) 120, 171
BstHHI GCGC 3 cut(s) 171, 2854, 2867
BstMAI GTCTC 4 cut(s) 842, 1308, 1343, 1553
BstMCI CGRYCG 1 cut(s) 47
BstMWI GCNNNNNNNGC 8 cut(s) 138, 147, 781, 1340, 1349, 1443, 2316, 2682
BstNSI RCATGY 4 cut(s) 626, 728, 1338, 2203
BstPAI GACNNNNGTC 1 cut(s) 2542
BstPI GGTNACC 1 cut(s) 2369
BstSFI CTRYAG 3 cut(s) 708, 1543, 2430
BstSLI GKGCMC 2 cut(s) 833, 2399
BstUI CGCG 2 cut(s) 120, 171
BstV1I GCAGC 3 cut(s) 159, 1144, 1933
BstV2I GAAGAC 2 cut(s) 744, 819
BstX2I RGATCY 2 cut(s) 451, 2128
BstXI CCANNNNNNTGG 3 cut(s) 582, 608, 1201
BstYI RGATCY 2 cut(s) 451, 2128
BstZI CGGCCG 1 cut(s) 44
Bsu36I CCTNAGG 1 cut(s) 2752
BsuI GTATCC 3 cut(s) 699, 2244, 2787
BsuRI GGCC 4 cut(s) 31, 46, 683, 1819
BtgZI GCGATG 1 cut(s) 186
BtsI GCAGTG 1 cut(s) 782
BtsIMutI CAGTG 5 cut(s) 315, 520, 649, 782, 877
BtuMI TCGCGA 1 cut(s) 120
Cac8I GCNNGC 5 cut(s) 44, 130, 181, 1354, 2666
CaiI CAGNNNCTG 1 cut(s) 648
CciI TCATGA 2 cut(s) 1461, 2551
CfoI GCGC 3 cut(s) 171, 2854, 2867
Cfr10I RCCGGY 1 cut(s) 42
Cfr13I GGNCC 2 cut(s) 596, 681
CseI GACGC 2 cut(s) 59, 2532
CsiI ACCWGGT 1 cut(s) 967
Csp6I GTAC 6 cut(s) 226, 518, 704, 722, 1643, 2197
CviQI GTAC 6 cut(s) 226, 518, 704, 722, 1643, 2197
DrdI GACNNNNNNGTC 1 cut(s) 746
DseDI GACNNNNNNGTC 1 cut(s) 746
EaeI YGGCCR 3 cut(s) 29, 44, 1817
EagI CGGCCG 1 cut(s) 44
Eam1104I CTCTTC 4 cut(s) 29, 309, 694, 1203
EarI CTCTTC 4 cut(s) 29, 309, 694, 1203
EciI GGCGGA 1 cut(s) 2795
Ecl136II GAGCTC 4 cut(s) 85, 387, 1239, 2785
EclXI CGGCCG 1 cut(s) 44
Eco130I CCWWGG 3 cut(s) 1232, 1552, 1646
Eco24I GRGCYC 4 cut(s) 87, 389, 1241, 2787
Eco32I GATATC 1 cut(s) 2263
Eco47I GGWCC 1 cut(s) 596
Eco52I CGGCCG 1 cut(s) 44
Eco53kI GAGCTC 4 cut(s) 85, 387, 1239, 2785
Eco81I CCTNAGG 1 cut(s) 2752
Eco91I GGTNACC 1 cut(s) 2369
EcoICRI GAGCTC 4 cut(s) 85, 387, 1239, 2785
EcoO65I GGTNACC 1 cut(s) 2369
EcoRI GAATTC 1 cut(s) 2817
EcoRV GATATC 1 cut(s) 2263
EcoT14I CCWWGG 3 cut(s) 1232, 1552, 1646
EcoT38I GRGCYC 4 cut(s) 87, 389, 1241, 2787
ErhI CCWWGG 3 cut(s) 1232, 1552, 1646
Esp3I CGTCTC 1 cut(s) 842
FaqI GGGAC 4 cut(s) 582, 2087, 2624, 2838
FauI CCCGC 2 cut(s) 2768, 2806
FbaI TGATCA 1 cut(s) 469
Fnu4HI GCNGC 3 cut(s) 148, 1158, 1922
FriOI GRGCYC 4 cut(s) 87, 389, 1241, 2787
Fsp4HI GCNGC 3 cut(s) 148, 1158, 1922
GlaI GCGC 3 cut(s) 170, 2853, 2866
GluI GCNGC 3 cut(s) 148, 1158, 1922
GsaI CCCAGC 2 cut(s) 1770, 2775
GsuI CTGGAG 2 cut(s) 678, 1143
HaeIII GGCC 4 cut(s) 31, 46, 683, 1819
HapII CCGG 5 cut(s) 28, 43, 47, 842, 1697
HgaI GACGC 2 cut(s) 59, 2532
HhaI GCGC 3 cut(s) 171, 2854, 2867
Hin1I GRCGYC 1 cut(s) 51
Hin6I GCGC 3 cut(s) 169, 2852, 2865
HinP1I GCGC 3 cut(s) 169, 2852, 2865
HincII GTYRAC 3 cut(s) 1564, 2161, 2744
HindII GTYRAC 3 cut(s) 1564, 2161, 2744
HindIII AAGCTT 1 cut(s) 1286
HinfI GANTC 7 cut(s) 207, 212, 1034, 1104, 1367, 1784, 1991
HpaII CCGG 5 cut(s) 28, 43, 47, 842, 1697
HphI GGTGA 7 cut(s) 755, 1999, 2381, 2447, 2495, 2538, 2858
Hpy166II GTNNAC 6 cut(s) 518, 730, 831, 1564, 2161, 2744
Hpy8I GTNNAC 6 cut(s) 518, 730, 831, 1564, 2161, 2744
Hpy99I CGWCG 1 cut(s) 83
HpyCH4IV ACGT 4 cut(s) 391, 1508, 1593, 1631
HpyCH4V TGCA 9 cut(s) 183, 775, 831, 1010, 1251, 1686, 1842, 1859, 2378
HpyF10VI GCNNNNNNNGC 8 cut(s) 138, 147, 781, 1340, 1349, 1443, 2316, 2682
HpySE526I ACGT 4 cut(s) 391, 1508, 1593, 1631
Hsp92I GRCGYC 1 cut(s) 51
HspAI GCGC 3 cut(s) 169, 2852, 2865
Kpn2I TCCGGA 1 cut(s) 1696
KroI GCCGGC 1 cut(s) 42
KroNI GCCGGC 1 cut(s) 44
Ksp22I TGATCA 1 cut(s) 469
LmnI GCTCC 7 cut(s) 384, 1236, 1331, 1929, 2719, 2782, 2790
Lsp1109I GCAGC 3 cut(s) 159, 1144, 1933
LweI GCATC 3 cut(s) 1665, 1829, 2839
MabI ACCWGGT 1 cut(s) 967
MaeII ACGT 4 cut(s) 391, 1508, 1593, 1631
MaeIII GTNAC 8 cut(s) 326, 715, 910, 1509, 1878, 1928, 2369, 2544
MfeI CAATTG 1 cut(s) 1246
MflI RGATCY 2 cut(s) 451, 2128
MhlI GDGCHC 6 cut(s) 87, 389, 833, 1241, 2399, 2787
MlsI TGGCCA 1 cut(s) 1819
MluNI TGGCCA 1 cut(s) 1819
MlyI GAGTC 2 cut(s) 206, 1113
MmeI TCCRAC 4 cut(s) 788, 1276, 1433, 2697
Mox20I TGGCCA 1 cut(s) 1819
MroI TCCGGA 1 cut(s) 1696
MroNI GCCGGC 1 cut(s) 42
MroXI GAANNNNTTC 1 cut(s) 2028
MscI TGGCCA 1 cut(s) 1819
MseI TTAA 5 cut(s) 1865, 1959, 2118, 2301, 2499
MslI CAYNNNNRTG 5 cut(s) 580, 661, 775, 836, 2282
Msp20I TGGCCA 1 cut(s) 1819
MspA1I CMGCKG 2 cut(s) 1799, 2775
MspCI CTTAAG 1 cut(s) 2498
MspI CCGG 5 cut(s) 28, 43, 47, 842, 1697
MunI CAATTG 1 cut(s) 1246
MvnI CGCG 2 cut(s) 120, 171
MwoI GCNNNNNNNGC 8 cut(s) 138, 147, 781, 1340, 1349, 1443, 2316, 2682
NaeI GCCGGC 1 cut(s) 44
NciI CCSGG 1 cut(s) 843
NgoMIV GCCGGC 1 cut(s) 42
NheI GCTAGC 1 cut(s) 1352
NlaIV GGNNCC 6 cut(s) 453, 598, 966, 2353, 2396, 2721
NmuCI GTSAC 6 cut(s) 326, 715, 1509, 1878, 2369, 2544
NruI TCGCGA 1 cut(s) 120
NspI RCATGY 4 cut(s) 626, 728, 1338, 2203
PagI TCATGA 2 cut(s) 1461, 2551
PciI ACATGT 2 cut(s) 724, 2199
PdiI GCCGGC 1 cut(s) 44
PdmI GAANNNNTTC 1 cut(s) 2028
PfeI GAWTC 5 cut(s) 207, 1034, 1367, 1784, 1991
PflMI CCANNNNNTGG 2 cut(s) 648, 2607
PfoI TCCNGGA 3 cut(s) 694, 2354, 2689
PkrI GCNGC 3 cut(s) 149, 1159, 1923
PleI GAGTC 2 cut(s) 206, 1112
PpsI GAGTC 2 cut(s) 206, 1112
Ppu21I YACGTR 1 cut(s) 392
PscI ACATGT 2 cut(s) 724, 2199
PshAI GACNNNNGTC 1 cut(s) 2542
PsiI TTATAA 2 cut(s) 1071, 2520
Psp124BI GAGCTC 4 cut(s) 87, 389, 1241, 2787
PspEI GGTNACC 1 cut(s) 2369
PspFI CCCAGC 2 cut(s) 1766, 2771
PspN4I GGNNCC 6 cut(s) 453, 598, 966, 2353, 2396, 2721
PspPI GGNCC 2 cut(s) 596, 681
PsrI GAACNNNNNNTAC 2 cut(s) 2227, 2259
PstNI CAGNNNCTG 1 cut(s) 648
PsuI RGATCY 2 cut(s) 451, 2128
PvuII CAGCTG 1 cut(s) 1799
RruI TCGCGA 1 cut(s) 120
RsaI GTAC 6 cut(s) 227, 519, 705, 723, 1644, 2198
RsaNI GTAC 6 cut(s) 226, 518, 704, 722, 1643, 2197
RseI CAYNNNNRTG 5 cut(s) 580, 661, 775, 836, 2282
SacI GAGCTC 4 cut(s) 87, 389, 1241, 2787
SaqAI TTAA 5 cut(s) 1865, 1959, 2118, 2301, 2499
SatI GCNGC 3 cut(s) 148, 1158, 1922
Sau96I GGNCC 2 cut(s) 596, 681
SchI GAGTC 2 cut(s) 206, 1113
SduI GDGCHC 6 cut(s) 87, 389, 833, 1241, 2399, 2787
SexAI ACCWGGT 1 cut(s) 967
SfaNI GCATC 3 cut(s) 1665, 1829, 2839
SfcI CTRYAG 3 cut(s) 708, 1543, 2430
SinI GGWCC 1 cut(s) 596
SmiMI CAYNNNNRTG 5 cut(s) 580, 661, 775, 836, 2282
SmlI CTYRAG 3 cut(s) 1535, 2498, 2618
SmoI CTYRAG 3 cut(s) 1535, 2498, 2618
SpeI ACTAGT 1 cut(s) 1148
SsiI CCGC 4 cut(s) 455, 2775, 2780, 2799
SspI AATATT 1 cut(s) 754
SstI GAGCTC 4 cut(s) 87, 389, 1241, 2787
StyI CCWWGG 3 cut(s) 1232, 1552, 1646
TaiI ACGT 4 cut(s) 394, 1511, 1596, 1634
TaqI TCGA 1 cut(s) 210
TatI WGTACW 3 cut(s) 225, 721, 2196
TfiI GAWTC 5 cut(s) 207, 1034, 1367, 1784, 1991
Tru1I TTAA 5 cut(s) 1865, 1959, 2118, 2301, 2499
Tru9I TTAA 5 cut(s) 1865, 1959, 2118, 2301, 2499
TscAI CASTG 5 cut(s) 315, 520, 649, 782, 884
TseFI GTSAC 6 cut(s) 326, 715, 1509, 1878, 2369, 2544
TseI GCWGC 3 cut(s) 147, 1157, 1921
Tsp45I GTSAC 6 cut(s) 326, 715, 1509, 1878, 2369, 2544
TspGWI ACGGA 1 cut(s) 1916
TspRI CASTG 5 cut(s) 315, 520, 649, 782, 884
Van91I CCANNNNNTGG 2 cut(s) 648, 2607
Vha464I CTTAAG 1 cut(s) 2498
VneI GTGCAC 1 cut(s) 829
VpaK11BI GGWCC 1 cut(s) 596
XapI RAATTY 6 cut(s) 928, 944, 1183, 1380, 1482, 2817
XbaI TCTAGA 2 cut(s) 2410, 2509
XceI RCATGY 4 cut(s) 626, 728, 1338, 2203
XcmI CCANNNNNNNNNTGG 1 cut(s) 2017
XmaJI CCTAGG 1 cut(s) 1552
XmnI GAANNNNTTC 1 cut(s) 2028
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.