Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0000445

Physical Location & Seq

Genomic Coordinates Reverse (-)

285956 .. 293245

Gene Structure 7290 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1001400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1416 bp

ATGCTTTCACTGAATAAAGAACGAGCTGCTTTGTGTTCCACAGGAAGAATGGAGAGGTACAAGTTAATAAAGGAAGTTGGTGATGGCACATTTGGGACTGTCTGGCAAGCTATTAATAAGCAAACTGGTGAAGTCGTTGCAATTAAAAAAATGAAGAAAAGTTATTTTTCATGGGAGGAGTGCGTAAGTCTACGGGAAGTGAAGTCATTGCGTAGAATGAATCATCCAAATATTGTGAAGCTCAAGGAAGTCATCAGAGAAAATGACATGTTGTACTTCGTGTTTGAATACATGGAGTTCAACCTGTATCAACTTATGAAAGATAAGGAAAAGCTTTTCCCTGAAGCTGAAGTCAGAAATTGGTGTTTTCAAGTTTTCCAAGGCCTTGCTTACATGCATCAGCGTGGATATTTTCATCGAGACCTTAAGCCAGAGAACTTATTGGTTACCAAAGATGTCATCAAAATTGCTGATTTTGGACTTGCTCGGGAAATCAATTCACAACCACCATATACAGAATACGTGTCCACACGGTGGTATCGAGCGCCCGAAGTGCTGCTTCAGTCGTACCTGTATAGCTCAAAAGTTGATATGTGGGCAATGGGTGCTATAATGGCTGAGTTGTTTTCTCTCCGCCCTTTATTTCCGGGTGTTAGTGAAGCAGATGAGGTATATAAAATTTGCAGTGTGATTGGAAGCCCAACCAAGGACTCATGGGCTGACGGGCTTCGCCTTGCAAGTGATATCAACTACCAATTTCCTCAGTTTGCTGGTGTTGATCTTTCTACACGGATTCCATCAGCTAGTGAGGGTGCAATCAGCCTTATAACATCACTTTGTTCTTGGGACCCTTCCAGGAGGCCAACTGCTGCAGAGGCCCTCCACCATCCTTTCTTCCAGGTGAGTTGCTATTCTGTTCCTCCATCCCTTCGTTCCAGATTAACTGTTGCTAGGACGCATCCAATAGCTGGAGCAAGGGGAGTGGAGCAGCAAAGTGCTAGAAGACTTTCTGGGACTGTATCTCATTCAAAGCTTGCTAGCAACTTCCCTTCCCCCAAGTTACATGCCTCTGTGGGCACAGGGGTGCAGCGGAAACTGGATATGGCCGACCAGGATGCGAAAAAGAATGATAAATATTTGAAAAGCTTTCCCAAGCAGCAGCAGAAATATCGACCACCGGGAAAGAGCAGTCCTACTTCTGTGAACAAGGTAAGGGTTGCACGTGGAGTTTCAGATACATCTGAGAAGCTGGCAAATATGACAATTGGTCATCACAGGCAGACTGTCGGGCAGCAGATGCGGCCCCCTCCCATGAAGGCTGGAGTCGAGTGGATTGGTGAGTCTGGAAACTTGTATCTCAGGCCTGTTCAAGAGATTCAACCTGGTAGAACCTATTCAAGGAAAGTTGCGGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

472

Amino Acids

53.42

Weight (kDa)

9.6

Isoelectric Point (pI)

40.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	20 - 299	4.8e-75	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	21 - 211	2.8e-40	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000445)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19110 AT4G19110 AT4G19110 AT5G45430 AT5G45430
fragaria_vesca	FvH4_2g16890 FvH4_5g19220 FvH4_5g19340 FvH4_5g19350 FvH4_5g19360 FvH4_5g23910 FvH4_7g27810
malus_domestica	MD00G1001400.v1.1 MD04G1058900.v1.1 MD04G1059300.v1.1 MD04G1059500.v1.1 MD04G1059600.v1.1 MD04G1059800.v1.1 MD04G1061700.v1.1 MD04G1061800.v1.1 MD06G1014800.v1.1 MD06G1052900.v1.1 MD06G1055500.v1.1
prunus_persica	Prupe.5G021300_v2.0.a1 Prupe.5G065900_v2.0.a1 Prupe.5G066500_v2.0.a1
pyrus_communis	pycom06g04440
rosa_chinensis	RchiOBHm_Chr1g0374681 RchiOBHm_Chr2g0120471 RchiOBHm_Chr2g0120711 RchiOBHm_Chr7g0203821 RchiOBHm_Chr7g0203861 RchiOBHm_Chr7g0208401 RchiOBHm_Chr7g0209011 RchiOBHm_Chr7g0213341
rosa_laevigata	RLG00000001348 RLG00000002813 RLG00000003173 RLG00000003212 RLG00000003503 RLG00000022835 RLG00000026723 RLG00000035532
rosa_multiflora	Rmu_co7960007.1_g000001 Rmu_co7963796.1_g000001 Rmu_co8519951.1_g000002 Rmu_sc0002038.1_g000009 Rmu_sc0004947.1_g000015 Rmu_sc0007490.1_g000005 Rmu_sc0011180.1_g000003 Rmu_sc0015273.1_g000013 Rmu_ssc0000190.1_g000014 Rmu_ssc0000372.1_g000031
rosa_roxburghii	Rroxscaffold_3G00246080 Rroxscaffold_3G00249860 Rroxscaffold_3G00249870 Rroxscaffold_3G00253500 Rroxscaffold_4G00283340
rosa_rugosa	Rorug01G0384300 Rorug07G0079000 Rorug07G0079000 Rorug07G0079000 Rorug07G0108300 Rorug07G0141200
rosa_samantha	Rh1AG395700 Rh1BG359900 Rh1DG006600 Rh1DG390900 Rh2AG287100 Rh3BG335800 Rh3CG321100 Rh5DG116800 Rh7AG273000 Rh7BG207600 Rh7BG207800 Rh7BG237700 Rh7BG268400 Rh7CG221100 Rh7CG221300 Rh7CG254000 Rh7CG257900 Rh7CG292200 Rh7DG215700 Rh7DG215900 Rh7DG244500 Rh7DG249800 Rh7DG280700
rosa_wichuraiana	Rw0G010370 Rw1G035090 Rw2G023020 Rw7G018200 Rw7G020570 Rw7G023690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	827
AccB7I	CCANNNNNTGG	2 cut(s)	534, 968
AccI	GTMKAC	1 cut(s)	190
AciI	CCGC	4 cut(s)	634, 1090, 1300, 1409
AcoI	YGGCCR	1 cut(s)	1104
AcsI	RAATTY	1 cut(s)	678
AcuI	CTGAAG	3 cut(s)	363, 369, 545
AcvI	CACGTG	1 cut(s)	1223
AdeI	CACNNNGTG	1 cut(s)	534
AfaI	GTAC	3 cut(s)	59, 275, 569
AfiI	CCNNNNNNNGG	4 cut(s)	534, 706, 968, 1398
AflII	CTTAAG	1 cut(s)	425
AflIII	ACRYGT	2 cut(s)	267, 522
AgsI	TTSAA	8 cut(s)	287, 301, 371, 1029, 1141, 1370, 1379, 1398
AhdI	GACNNNNNGTC	1 cut(s)	1266
AjnI	CCWGG	4 cut(s)	854, 897, 1110, 1381
AleI	CACNNNNGTG	1 cut(s)	1082
Alw26I	GTCTC	1 cut(s)	414
Ama87I	CYCGRG	1 cut(s)	486
AoxI	GGCC	6 cut(s)	382, 860, 876, 1104, 1301, 1361
ApeKI	GCWGC	8 cut(s)	26, 556, 869, 988, 1087, 1156, 1159, 1291
ApoI	RAATTY	1 cut(s)	678
AseI	ATTAAT	1 cut(s)	114
Asp700I	GAANNNNTTC	2 cut(s)	1006, 1393
AspLEI	GCGC	1 cut(s)	547
AspS9I	GGNCC	3 cut(s)	847, 877, 1302
AsuC2I	CCSGG	2 cut(s)	648, 1179
AsuHPI	GGTGA	4 cut(s)	92, 140, 913, 1349
AsuNHI	GCTAGC	1 cut(s)	1037
AvaI	CYCGRG	1 cut(s)	486
AvaII	GGWCC	1 cut(s)	847
BaeGI	GKGCMC	1 cut(s)	1079
BaeI	ACNNNNGTAYC	2 cut(s)	521, 554
BbrPI	CACGTG	1 cut(s)	1223
BbsI	GAAGAC	1 cut(s)	1009
BbvI	GCAGC	8 cut(s)	13, 543, 856, 1000, 1099, 1168, 1171, 1303
BccI	CCATC	4 cut(s)	77, 805, 894, 931
BcgI	CGANNNNNNTGC	4 cut(s)	1097, 1131, 1151, 1185
BciT130I	CCWGG	4 cut(s)	856, 899, 1112, 1383
BcnI	CCSGG	2 cut(s)	648, 1179
BcoDI	GTCTC	1 cut(s)	414
BfaI	CTAG	4 cut(s)	804, 951, 999, 1038
BfmI	CTRYAG	1 cut(s)	870
BfoI	RGCGCY	1 cut(s)	548
BfrI	CTTAAG	1 cut(s)	425
BisI	GCNGC	9 cut(s)	27, 557, 870, 989, 1088, 1157, 1160, 1292, 1301
BlsI	GCNGC	9 cut(s)	28, 558, 871, 990, 1089, 1158, 1161, 1293, 1302
Bme1390I	CCNGG	6 cut(s)	648, 856, 899, 1112, 1179, 1383
Bme18I	GGWCC	1 cut(s)	847
BmeRI	GACNNNNNGTC	1 cut(s)	1266
BmeT110I	CYCGRG	1 cut(s)	486
BmgT120I	GGNCC	3 cut(s)	847, 877, 1302
BmiI	GGNNCC	3 cut(s)	848, 849, 1304
BmrFI	CCNGG	6 cut(s)	648, 856, 899, 1112, 1179, 1383
BmsI	GCATC	4 cut(s)	406, 967, 1105, 1287
BmtI	GCTAGC	1 cut(s)	1041
BpiI	GAAGAC	1 cut(s)	1009
BpmI	CTGGAG	2 cut(s)	990, 1341
BpuEI	CTTGAG	1 cut(s)	227
BpuMI	CCSGG	2 cut(s)	648, 1179
BsaAI	YACGTR	2 cut(s)	523, 1223
BsaI	GGTCTC	1 cut(s)	414
BsaJI	CCNNGG	2 cut(s)	379, 705
Bsc4I	CCNNNNNNNGG	4 cut(s)	534, 706, 968, 1398
Bse1I	ACTGG	2 cut(s)	130, 1101
Bse3DI	GCAATG	2 cut(s)	206, 606
BseBI	CCWGG	4 cut(s)	856, 899, 1112, 1383
BseDI	CCNNGG	2 cut(s)	379, 705
BseGI	GGATG	5 cut(s)	223, 886, 923, 958, 1120
BseLI	CCNNNNNNNGG	4 cut(s)	534, 706, 968, 1398
BseMI	GCAATG	2 cut(s)	206, 606
BseMII	CTCAG	4 cut(s)	609, 776, 1233, 1372
BseNI	ACTGG	2 cut(s)	130, 1101
BseRI	GAGGAG	1 cut(s)	191
BseSI	GKGCMC	1 cut(s)	1079
BseXI	GCAGC	8 cut(s)	13, 543, 856, 1000, 1099, 1168, 1171, 1303
BsgI	GTGCAG	1 cut(s)	1106
BshFI	GGCC	6 cut(s)	384, 862, 878, 1106, 1303, 1363
BsiHKCI	CYCGRG	1 cut(s)	486
BsiSI	CCGG	2 cut(s)	647, 1178
BslFI	GGGAC	3 cut(s)	109, 860, 1027
BslI	CCNNNNNNNGG	4 cut(s)	534, 706, 968, 1398
BsmAI	GTCTC	1 cut(s)	414
BsmFI	GGGAC	3 cut(s)	109, 860, 1027
BsnI	GGCC	6 cut(s)	384, 862, 878, 1106, 1303, 1363
Bso31I	GGTCTC	1 cut(s)	414
BsoBI	CYCGRG	1 cut(s)	486
Bsp1286I	GDGCHC	1 cut(s)	1079
Bsp143I	GATC	1 cut(s)	778
BspACI	CCGC	4 cut(s)	634, 1090, 1300, 1409
BspANI	GGCC	6 cut(s)	384, 862, 878, 1106, 1303, 1363
BspCNI	CTCAG	4 cut(s)	610, 775, 1234, 1371
BspLI	GGNNCC	3 cut(s)	848, 849, 1304
BspMAI	CTGCAG	1 cut(s)	874
BspOI	GCTAGC	1 cut(s)	1041
BspTI	CTTAAG	1 cut(s)	425
BspTNI	GGTCTC	1 cut(s)	414
BsrDI	GCAATG	2 cut(s)	206, 606
BsrI	ACTGG	2 cut(s)	130, 1101
BssECI	CCNNGG	2 cut(s)	379, 705
BssMI	GATC	1 cut(s)	778
BssT1I	CCWWGG	2 cut(s)	379, 705
Bst2UI	CCWGG	4 cut(s)	856, 899, 1112, 1383
Bst4CI	ACNGT	5 cut(s)	100, 534, 946, 1018, 1285
BstAFI	CTTAAG	1 cut(s)	425
BstAPI	GCANNNNNTGC	2 cut(s)	605, 1297
BstBAI	YACGTR	2 cut(s)	523, 1223
BstC8I	GCNNGC	4 cut(s)	108, 1035, 1039, 1251
BstDEI	CTNAG	4 cut(s)	618, 762, 1242, 1358
BstEII	GGTNACC	1 cut(s)	445
BstENI	CCTNNNNNAGG	1 cut(s)	1396
BstF5I	GGATG	5 cut(s)	223, 886, 923, 958, 1120
BstH2I	RGCGCY	1 cut(s)	548
BstHHI	GCGC	1 cut(s)	547
BstKTI	GATC	1 cut(s)	781
BstMAI	GTCTC	1 cut(s)	414
BstMBI	GATC	1 cut(s)	778
BstMWI	GCNNNNNNNGC	6 cut(s)	553, 605, 614, 875, 1297, 1300
BstNI	CCWGG	4 cut(s)	856, 899, 1112, 1383
BstNSI	RCATGY	3 cut(s)	271, 397, 1067
BstPI	GGTNACC	1 cut(s)	445
BstSCI	CCNGG	6 cut(s)	646, 854, 897, 1110, 1177, 1381
BstSFI	CTRYAG	1 cut(s)	870
BstSLI	GKGCMC	1 cut(s)	1079
BstV1I	GCAGC	8 cut(s)	13, 543, 856, 1000, 1099, 1168, 1171, 1303
BstV2I	GAAGAC	1 cut(s)	1009
BsuRI	GGCC	6 cut(s)	384, 862, 878, 1106, 1303, 1363
BtsCI	GGATG	5 cut(s)	223, 886, 923, 958, 1120
BtsI	GCAGTG	1 cut(s)	691
BtsIMutI	CAGTG	2 cut(s)	8, 691
Cac8I	GCNNGC	4 cut(s)	108, 1035, 1039, 1251
CfoI	GCGC	1 cut(s)	547
Cfr13I	GGNCC	3 cut(s)	847, 877, 1302
CseI	GACGC	1 cut(s)	964
CsiI	ACCWGGT	1 cut(s)	1381
Csp6I	GTAC	3 cut(s)	58, 274, 568
CspCI	CAANNNNNGTGG	2 cut(s)	963, 998
CviAII	CATG	7 cut(s)	171, 268, 292, 394, 714, 1064, 1312
CviQI	GTAC	3 cut(s)	58, 274, 568
DdeI	CTNAG	4 cut(s)	618, 762, 1242, 1358
DpnI	GATC	1 cut(s)	780
DpnII	GATC	1 cut(s)	778
DraIII	CACNNNGTG	1 cut(s)	534
DriI	GACNNNNNGTC	1 cut(s)	1266
EaeI	YGGCCR	1 cut(s)	1104
Eam1105I	GACNNNNNGTC	1 cut(s)	1266
EciI	GGCGGA	1 cut(s)	623
Eco130I	CCWWGG	2 cut(s)	379, 705
Eco147I	AGGCCT	2 cut(s)	384, 1363
Eco31I	GGTCTC	1 cut(s)	414
Eco32I	GATATC	1 cut(s)	745
Eco47I	GGWCC	1 cut(s)	847
Eco57I	CTGAAG	3 cut(s)	363, 369, 545
Eco72I	CACGTG	1 cut(s)	1223
Eco88I	CYCGRG	1 cut(s)	486
Eco91I	GGTNACC	1 cut(s)	445
EcoNI	CCTNNNNNAGG	1 cut(s)	1396
EcoO109I	RGGNCCY	2 cut(s)	847, 877
EcoO65I	GGTNACC	1 cut(s)	445
EcoRII	CCWGG	4 cut(s)	854, 897, 1110, 1381
EcoRV	GATATC	1 cut(s)	745
EcoT14I	CCWWGG	2 cut(s)	379, 705
EcoT22I	ATGCAT	1 cut(s)	399
ErhI	CCWWGG	2 cut(s)	379, 705
FaeI	CATG	7 cut(s)	174, 271, 295, 397, 717, 1067, 1315
FalI	AAGNNNNNCTT	2 cut(s)	543, 575
FaqI	GGGAC	3 cut(s)	109, 860, 1027
FatI	CATG	7 cut(s)	170, 267, 291, 393, 713, 1063, 1311
FauI	CCCGC	1 cut(s)	1402
FblI	GTMKAC	1 cut(s)	190
Fnu4HI	GCNGC	9 cut(s)	27, 557, 870, 989, 1088, 1157, 1160, 1292, 1301
FokI	GGATG	5 cut(s)	210, 873, 910, 945, 1127
Fsp4HI	GCNGC	9 cut(s)	27, 557, 870, 989, 1088, 1157, 1160, 1292, 1301
FspBI	CTAG	4 cut(s)	804, 951, 999, 1038
GlaI	GCGC	1 cut(s)	546
GluI	GCNGC	9 cut(s)	27, 557, 870, 989, 1088, 1157, 1160, 1292, 1301
GsuI	CTGGAG	2 cut(s)	990, 1341
HaeII	RGCGCY	1 cut(s)	548
HaeIII	GGCC	6 cut(s)	384, 862, 878, 1106, 1303, 1363
HapII	CCGG	2 cut(s)	647, 1178
HgaI	GACGC	1 cut(s)	964
HhaI	GCGC	1 cut(s)	547
Hin1II	CATG	7 cut(s)	174, 271, 295, 397, 717, 1067, 1315
Hin6I	GCGC	1 cut(s)	545
HinP1I	GCGC	1 cut(s)	545
HindIII	AAGCTT	3 cut(s)	332, 1031, 1144
HinfI	GANTC	6 cut(s)	220, 710, 793, 1323, 1340, 1375
HpaII	CCGG	2 cut(s)	647, 1178
HphI	GGTGA	4 cut(s)	92, 140, 913, 1349
Hpy166II	GTNNAC	3 cut(s)	191, 528, 1204
Hpy188I	TCNGA	4 cut(s)	257, 356, 1234, 1243
Hpy188III	TCNNGA	5 cut(s)	419, 488, 936, 1344, 1370
Hpy8I	GTNNAC	3 cut(s)	191, 528, 1204
HpyAV	CCTTC	4 cut(s)	861, 938, 1059, 1309
HpyCH4III	ACNGT	5 cut(s)	100, 534, 946, 1018, 1285
HpyCH4IV	ACGT	2 cut(s)	522, 1222
HpyCH4V	TGCA	8 cut(s)	140, 397, 684, 737, 815, 872, 1087, 1220
HpyF10VI	GCNNNNNNNGC	6 cut(s)	553, 605, 614, 875, 1297, 1300
HpyF3I	CTNAG	4 cut(s)	618, 762, 1242, 1358
HpySE526I	ACGT	2 cut(s)	522, 1222
Hsp92II	CATG	7 cut(s)	174, 271, 295, 397, 717, 1067, 1315
HspAI	GCGC	1 cut(s)	545
KflI	GGGWCCC	1 cut(s)	847
Kzo9I	GATC	1 cut(s)	778
LmnI	GCTCC	2 cut(s)	971, 985
Lsp1109I	GCAGC	8 cut(s)	13, 543, 856, 1000, 1099, 1168, 1171, 1303
LweI	GCATC	4 cut(s)	406, 967, 1105, 1287
MabI	ACCWGGT	1 cut(s)	1381
MaeI	CTAG	4 cut(s)	804, 951, 999, 1038
MaeII	ACGT	2 cut(s)	522, 1222
MaeIII	GTNAC	2 cut(s)	445, 1059
MalI	GATC	1 cut(s)	780
MboI	GATC	1 cut(s)	778
MboII	GAAGA	4 cut(s)	57, 166, 886, 1014
MfeI	CAATTG	1 cut(s)	1263
MhlI	GDGCHC	1 cut(s)	1079
MluCI	AATT	7 cut(s)	141, 358, 465, 496, 678, 755, 1263
MlyI	GAGTC	3 cut(s)	704, 1332, 1349
Mph1103I	ATGCAT	1 cut(s)	399
MroXI	GAANNNNTTC	2 cut(s)	1006, 1393
MseI	TTAA	5 cut(s)	65, 114, 144, 426, 941
MslI	CAYNNNNRTG	2 cut(s)	402, 1082
MspA1I	CMGCKG	1 cut(s)	1090
MspCI	CTTAAG	1 cut(s)	425
MspI	CCGG	2 cut(s)	647, 1178
MspR9I	CCNGG	6 cut(s)	648, 856, 899, 1112, 1179, 1383
MunI	CAATTG	1 cut(s)	1263
MvaI	CCWGG	4 cut(s)	856, 899, 1112, 1383
MwoI	GCNNNNNNNGC	6 cut(s)	553, 605, 614, 875, 1297, 1300
NciI	CCSGG	2 cut(s)	648, 1179
NdeII	GATC	1 cut(s)	778
NheI	GCTAGC	1 cut(s)	1037
NlaIII	CATG	7 cut(s)	174, 271, 295, 397, 717, 1067, 1315
NlaIV	GGNNCC	3 cut(s)	848, 849, 1304
NsiI	ATGCAT	1 cut(s)	399
NspI	RCATGY	3 cut(s)	271, 397, 1067
OliI	CACNNNNGTG	1 cut(s)	1082
PceI	AGGCCT	2 cut(s)	384, 1363
PciI	ACATGT	1 cut(s)	267
PcsI	WCGNNNNNNNCGW	1 cut(s)	538
PdmI	GAANNNNTTC	2 cut(s)	1006, 1393
PfeI	GAWTC	3 cut(s)	220, 793, 1375
PflMI	CCANNNNNTGG	2 cut(s)	534, 968
PfoI	TCCNGGA	1 cut(s)	854
PkrI	GCNGC	9 cut(s)	28, 558, 871, 990, 1089, 1158, 1161, 1293, 1302
PleI	GAGTC	3 cut(s)	704, 1331, 1348
PmaCI	CACGTG	1 cut(s)	1223
PmlI	CACGTG	1 cut(s)	1223
PpsI	GAGTC	3 cut(s)	704, 1331, 1348
Ppu21I	YACGTR	2 cut(s)	523, 1223
PpuMI	RGGWCCY	1 cut(s)	847
PscI	ACATGT	1 cut(s)	267
PshBI	ATTAAT	1 cut(s)	114
PsiI	TTATAA	1 cut(s)	827
Psp5II	RGGWCCY	1 cut(s)	847
Psp6I	CCWGG	4 cut(s)	854, 897, 1110, 1381
PspCI	CACGTG	1 cut(s)	1223
PspEI	GGTNACC	1 cut(s)	445
PspGI	CCWGG	4 cut(s)	854, 897, 1110, 1381
PspN4I	GGNNCC	3 cut(s)	848, 849, 1304
PspPI	GGNCC	3 cut(s)	847, 877, 1302
PspPPI	RGGWCCY	1 cut(s)	847
PstI	CTGCAG	1 cut(s)	874
RsaI	GTAC	3 cut(s)	59, 275, 569
RsaNI	GTAC	3 cut(s)	58, 274, 568
RseI	CAYNNNNRTG	2 cut(s)	402, 1082
SaqAI	TTAA	5 cut(s)	65, 114, 144, 426, 941
SatI	GCNGC	9 cut(s)	27, 557, 870, 989, 1088, 1157, 1160, 1292, 1301
Sau3AI	GATC	1 cut(s)	778
Sau96I	GGNCC	3 cut(s)	847, 877, 1302
SchI	GAGTC	3 cut(s)	704, 1332, 1349
ScrFI	CCNGG	6 cut(s)	648, 856, 899, 1112, 1179, 1383
SduI	GDGCHC	1 cut(s)	1079
SexAI	ACCWGGT	1 cut(s)	1381
SfaNI	GCATC	4 cut(s)	406, 967, 1105, 1287
SfcI	CTRYAG	1 cut(s)	870
SinI	GGWCC	1 cut(s)	847
SmiMI	CAYNNNNRTG	2 cut(s)	402, 1082
SmlI	CTYRAG	2 cut(s)	242, 425
SmoI	CTYRAG	2 cut(s)	242, 425
Sse9I	AATT	7 cut(s)	141, 358, 465, 496, 678, 755, 1263
SseBI	AGGCCT	2 cut(s)	384, 1363
SsiI	CCGC	4 cut(s)	634, 1090, 1300, 1409
SspI	AATATT	2 cut(s)	232, 1136
SspMI	CTAG	4 cut(s)	804, 951, 999, 1038
StuI	AGGCCT	2 cut(s)	384, 1363
StyD4I	CCNGG	6 cut(s)	646, 854, 897, 1110, 1177, 1381
StyI	CCWWGG	2 cut(s)	379, 705
TaaI	ACNGT	5 cut(s)	100, 534, 946, 1018, 1285
TaiI	ACGT	2 cut(s)	525, 1225
TaqI	TCGA	4 cut(s)	418, 541, 1171, 1326
TasI	AATT	7 cut(s)	141, 358, 465, 496, 678, 755, 1263
TatI	WGTACW	1 cut(s)	273
TauI	GCSGC	1 cut(s)	1303
TfiI	GAWTC	3 cut(s)	220, 793, 1375
Tru1I	TTAA	5 cut(s)	65, 114, 144, 426, 941
Tru9I	TTAA	5 cut(s)	65, 114, 144, 426, 941
TscAI	CASTG	2 cut(s)	15, 691
TseI	GCWGC	8 cut(s)	26, 556, 869, 988, 1087, 1156, 1159, 1291
TspDTI	ATGAA	6 cut(s)	159, 167, 233, 332, 404, 1328
TspGWI	ACGGA	1 cut(s)	805
TspRI	CASTG	2 cut(s)	15, 691
Van91I	CCANNNNNTGG	2 cut(s)	534, 968
Vha464I	CTTAAG	1 cut(s)	425
VpaK11BI	GGWCC	1 cut(s)	847
VspI	ATTAAT	1 cut(s)	114
XagI	CCTNNNNNAGG	1 cut(s)	1396
XapI	RAATTY	1 cut(s)	678
XceI	RCATGY	3 cut(s)	271, 397, 1067
XcmI	CCANNNNNNNNNTGG	1 cut(s)	46
XmiI	GTMKAC	1 cut(s)	190
XmnI	GAANNNNTTC	2 cut(s)	1006, 1393
XspI	CTAG	4 cut(s)	804, 951, 999, 1038
Zsp2I	ATGCAT	1 cut(s)	399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.