Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011180.1

Orthogroup ID

OG0000445

Physical Location & Seq

Genomic Coordinates Reverse (-)

14583 .. 19221

Gene Structure 4639 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011180.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1578 bp

atgtcctgtggtacttgtcctttcttgccatccatgccattttgtagtcttgaagacgggaagttagtaatgaataaggctgtgcagcccatccaccataagatttctgtgttttttaaggatcatcttctgaagataaatgccatttatcttttgcgagtctttatgctttcactgaataaagaaagagctgctttgagttcctctggaagaatggagaggtacaagttaataaaggaagttggtgatggaacatttggaactgtgtggcgtgctattaataagcagactggtgaagttgttgcaatcaaaaaaatgaagaaaagatattattcatgggaggagtgcataagtcttcgagaagttaagtcattgcgtagaatgaatcatccaaatattgtgaagctcaaggaagtcatcagagaacatgacatcttgtactttgtgttggaatatatggagtttaatctgtaccagcttatgaaagataaggaaaagcttttccctgaagcgcaagtcagaaattggtgttttcaagtttttcaaggccttgcttacatgcatcagcgtggatattttcatcgtgaccttaagccagagaacttgttggttaccaaagatttaatcaaacttgctgactttggtcttgctcgggaaattgaatcccaaccaccgtacactgaatacgtgtcgacacgctggtaccgagctcctgaagtactgcttcagtcatacctgtatagctctaaagttgatatgtgggcgatgggtgcaatcatggccgagttgtttagtcttcgccctctttttccgggtgttagtgaagcagatgagatacacaaaatttgcagtgtgattggcactccaaacaaggattcatgggcagatgggcttcgtcttgcaagggatatcaactaccaatttccacagtttgctggtgttcatctttcttctctgattccatcagctagtgatcatgcaattagcctcattagatcactttgttcttgggacccttccaagaggccaacagctgcagaggccctccagcaccctttcttccagagttgctactatgttccaccatcccttcgtcccaaactaacgactgctaggacaccaccatttgctggaacaaggggagcattggagcagcaatctgctagaaaggtctctgggactttatccagtgcaaagctcactagcagttttccttctccaaagttgcatgcttctataggcacgggtgtgcagcgcaaattggatatggctaaccaggatgctaaaaagaatgataaatacttgaagagctctgccaatcaacaaaaatatcggccccctggaaagagcagtcctacctctgtgaacaaggcacgggctccacgtggtgtttcagatgcatctgagaagctatcaaacatgacaattggttcccgcaggcaatctgtggggcaagcgctgcgtccacctgccatgaaagctggagcccagtggtttggcgagactgggaacttgtatctcaggcctgttcaagagatccaacctggcagatcctattctcggaaagtcgcgggatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

525

Amino Acids

59.49

Weight (kDa)

9.74

Isoelectric Point (pI)

51.13

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000445)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19110 AT4G19110 AT4G19110 AT5G45430 AT5G45430
fragaria_vesca	FvH4_2g16890 FvH4_5g19220 FvH4_5g19340 FvH4_5g19350 FvH4_5g19360 FvH4_5g23910 FvH4_7g27810
malus_domestica	MD00G1001400.v1.1 MD04G1058900.v1.1 MD04G1059300.v1.1 MD04G1059500.v1.1 MD04G1059600.v1.1 MD04G1059800.v1.1 MD04G1061700.v1.1 MD04G1061800.v1.1 MD06G1014800.v1.1 MD06G1052900.v1.1 MD06G1055500.v1.1
prunus_persica	Prupe.5G021300_v2.0.a1 Prupe.5G065900_v2.0.a1 Prupe.5G066500_v2.0.a1
pyrus_communis	pycom06g04440
rosa_chinensis	RchiOBHm_Chr1g0374681 RchiOBHm_Chr2g0120471 RchiOBHm_Chr2g0120711 RchiOBHm_Chr7g0203821 RchiOBHm_Chr7g0203861 RchiOBHm_Chr7g0208401 RchiOBHm_Chr7g0209011 RchiOBHm_Chr7g0213341
rosa_laevigata	RLG00000001348 RLG00000002813 RLG00000003173 RLG00000003212 RLG00000003503 RLG00000022835 RLG00000026723 RLG00000035532
rosa_multiflora	Rmu_co7960007.1_g000001 Rmu_co7963796.1_g000001 Rmu_co8519951.1_g000002 Rmu_sc0002038.1_g000009 Rmu_sc0004947.1_g000015 Rmu_sc0007490.1_g000005 Rmu_sc0011180.1_g000003 Rmu_sc0015273.1_g000013 Rmu_ssc0000190.1_g000014 Rmu_ssc0000372.1_g000031
rosa_roxburghii	Rroxscaffold_3G00246080 Rroxscaffold_3G00249860 Rroxscaffold_3G00249870 Rroxscaffold_3G00253500 Rroxscaffold_4G00283340
rosa_rugosa	Rorug01G0384300 Rorug07G0079000 Rorug07G0079000 Rorug07G0079000 Rorug07G0108300 Rorug07G0141200
rosa_samantha	Rh1AG395700 Rh1BG359900 Rh1DG006600 Rh1DG390900 Rh2AG287100 Rh3BG335800 Rh3CG321100 Rh5DG116800 Rh7AG273000 Rh7BG207600 Rh7BG207800 Rh7BG237700 Rh7BG268400 Rh7CG221100 Rh7CG221300 Rh7CG254000 Rh7CG257900 Rh7CG292200 Rh7DG215700 Rh7DG215900 Rh7DG244500 Rh7DG249800 Rh7DG280700
rosa_wichuraiana	Rw0G010370 Rw1G035090 Rw2G023020 Rw7G018200 Rw7G020570 Rw7G023690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1477
Acc36I	ACCTGC	1 cut(s)	1477
Acc65I	GGTACC	1 cut(s)	702
AccB1I	GGYRCC	1 cut(s)	702
AccB7I	CCANNNNNTGG	1 cut(s)	1130
AccI	GTMKAC	1 cut(s)	692
AccII	CGCG	1 cut(s)	1571
AciI	CCGC	2 cut(s)	1435, 1571
AclWI	GGATC	3 cut(s)	129, 1531, 1545
AcoI	YGGCCR	1 cut(s)	780
AcsI	RAATTY	1 cut(s)	843
AcuI	CTGAAG	4 cut(s)	152, 528, 710, 735
AcvI	CACGTG	1 cut(s)	1385
AdeI	CACNNNGTG	1 cut(s)	1388
AfaI	GTAC	7 cut(s)	13, 224, 440, 473, 677, 704, 720
AfeI	AGCGCT	1 cut(s)	1458
AfiI	CCNNNNNNNGG	2 cut(s)	1130, 1560
AflII	CTTAAG	1 cut(s)	590
AflIII	ACRYGT	1 cut(s)	687
AgsI	TTSAA	6 cut(s)	53, 536, 545, 662, 1306, 1532
AjnI	CCWGG	3 cut(s)	1275, 1339, 1543
AjuI	GAANNNNNNNTTGG	2 cut(s)	859, 891
AleI	CACNNNNGTG	1 cut(s)	1247
Alw21I	GWGCWC	2 cut(s)	712, 1313
Alw26I	GTCTC	2 cut(s)	1177, 1496
AlwI	GGATC	3 cut(s)	129, 1531, 1545
Ama87I	CYCGRG	1 cut(s)	651
Aor51HI	AGCGCT	1 cut(s)	1458
AoxI	GGCC	6 cut(s)	547, 780, 1025, 1041, 1334, 1523
ApeKI	GCWGC	6 cut(s)	85, 191, 1034, 1153, 1252, 1459
ApoI	RAATTY	1 cut(s)	843
AseI	ATTAAT	1 cut(s)	279
Asp718I	GGTACC	1 cut(s)	702
AspLEI	GCGC	3 cut(s)	514, 1257, 1459
AspS9I	GGNCC	3 cut(s)	1012, 1042, 1335
AsuC2I	CCSGG	1 cut(s)	813
AsuHPI	GGTGA	2 cut(s)	257, 305
AvaI	CYCGRG	1 cut(s)	651
AvaII	GGWCC	1 cut(s)	1012
BaeI	ACNNNNGTAYC	2 cut(s)	686, 719
BanI	GGYRCC	1 cut(s)	702
BanII	GRGCYC	4 cut(s)	712, 1313, 1381, 1489
BbrPI	CACGTG	1 cut(s)	1385
BbsI	GAAGAC	3 cut(s)	60, 347, 788
Bbv12I	GWGCWC	2 cut(s)	712, 1313
BbvI	GCAGC	6 cut(s)	97, 178, 1021, 1165, 1264, 1446
BccI	CCATC	7 cut(s)	37, 98, 242, 760, 881, 970, 1093
BciT130I	CCWGG	3 cut(s)	1277, 1341, 1545
BclI	TGATCA	1 cut(s)	973
BcnI	CCSGG	1 cut(s)	813
BcoDI	GTCTC	2 cut(s)	1177, 1496
BfaI	CTAG	4 cut(s)	969, 1113, 1164, 1203
BfmI	CTRYAG	2 cut(s)	1035, 1236
BfoI	RGCGCY	1 cut(s)	1460
BfrI	CTTAAG	1 cut(s)	590
BfuAI	ACCTGC	1 cut(s)	1477
BisI	GCNGC	6 cut(s)	86, 192, 1035, 1154, 1253, 1460
BlsI	GCNGC	6 cut(s)	87, 193, 1036, 1155, 1254, 1461
BmcAI	AGTACT	1 cut(s)	720
Bme1390I	CCNGG	4 cut(s)	813, 1277, 1341, 1545
Bme18I	GGWCC	1 cut(s)	1012
BmeT110I	CYCGRG	1 cut(s)	651
BmgT120I	GGNCC	3 cut(s)	1012, 1042, 1335
BmiI	GGNNCC	7 cut(s)	704, 1013, 1014, 1337, 1380, 1432, 1486
BmrFI	CCNGG	4 cut(s)	813, 1277, 1341, 1545
BmrI	ACTGGG	2 cut(s)	1483, 1515
BmsI	GCATC	4 cut(s)	571, 1270, 1387, 1409
BmuI	ACTGGG	2 cut(s)	1483, 1515
BoxI	GACNNNNGTC	1 cut(s)	642
BpiI	GAAGAC	3 cut(s)	60, 347, 788
BpmI	CTGGAG	2 cut(s)	1031, 1503
BpuEI	CTTGAG	1 cut(s)	392
BpuMI	CCSGG	1 cut(s)	813
BsaAI	YACGTR	2 cut(s)	688, 1385
BsaI	GGTCTC	1 cut(s)	1177
BsaJI	CCNNGG	1 cut(s)	1339
Bsc4I	CCNNNNNNNGG	2 cut(s)	1130, 1560
Bse1I	ACTGG	4 cut(s)	295, 1188, 1489, 1510
Bse3DI	GCAATG	1 cut(s)	371
BseBI	CCWGG	3 cut(s)	1277, 1341, 1545
BseDI	CCNNGG	1 cut(s)	1339
BseGI	GGATG	5 cut(s)	29, 90, 388, 1085, 1285
BseLI	CCNNNNNNNGG	2 cut(s)	1130, 1560
BseMI	GCAATG	1 cut(s)	371
BseMII	CTCAG	2 cut(s)	1395, 1534
BseNI	ACTGG	4 cut(s)	295, 1188, 1489, 1510
BseRI	GAGGAG	1 cut(s)	356
BseXI	GCAGC	6 cut(s)	97, 178, 1021, 1165, 1264, 1446
BsgI	GTGCAG	2 cut(s)	104, 1271
Bsh1236I	CGCG	1 cut(s)	1571
BshFI	GGCC	6 cut(s)	549, 782, 1027, 1043, 1336, 1525
BshNI	GGYRCC	1 cut(s)	702
BsiHKAI	GWGCWC	2 cut(s)	712, 1313
BsiHKCI	CYCGRG	1 cut(s)	651
BsiSI	CCGG	1 cut(s)	812
BslFI	GGGAC	3 cut(s)	1025, 1080, 1192
BslI	CCNNNNNNNGG	2 cut(s)	1130, 1560
BsmAI	GTCTC	2 cut(s)	1177, 1496
BsmFI	GGGAC	3 cut(s)	1025, 1080, 1192
BsnI	GGCC	6 cut(s)	549, 782, 1027, 1043, 1336, 1525
Bso31I	GGTCTC	1 cut(s)	1177
BsoBI	CYCGRG	1 cut(s)	651
Bsp1286I	GDGCHC	4 cut(s)	712, 1313, 1381, 1489
Bsp143I	GATC	5 cut(s)	121, 973, 995, 1536, 1550
BspACI	CCGC	2 cut(s)	1435, 1571
BspANI	GGCC	6 cut(s)	549, 782, 1027, 1043, 1336, 1525
BspCNI	CTCAG	2 cut(s)	1396, 1533
BspFNI	CGCG	1 cut(s)	1571
BspLI	GGNNCC	7 cut(s)	704, 1013, 1014, 1337, 1380, 1432, 1486
BspMAI	CTGCAG	1 cut(s)	1039
BspMI	ACCTGC	1 cut(s)	1477
BspPI	GGATC	3 cut(s)	129, 1531, 1545
BspQI	GCTCTTC	1 cut(s)	1301
BspT107I	GGYRCC	1 cut(s)	702
BspTI	CTTAAG	1 cut(s)	590
BspTNI	GGTCTC	1 cut(s)	1177
BsrDI	GCAATG	1 cut(s)	371
BsrI	ACTGG	4 cut(s)	295, 1188, 1489, 1510
BssECI	CCNNGG	1 cut(s)	1339
BssMI	GATC	5 cut(s)	121, 973, 995, 1536, 1550
Bst2UI	CCWGG	3 cut(s)	1277, 1341, 1545
Bst4CI	ACNGT	3 cut(s)	265, 675, 930
Bst6I	CTCTTC	1 cut(s)	1301
BstAFI	CTTAAG	1 cut(s)	590
BstAPI	GCANNNNNTGC	1 cut(s)	1459
BstBAI	YACGTR	2 cut(s)	688, 1385
BstC8I	GCNNGC	4 cut(s)	273, 1230, 1439, 1455
BstDEI	CTNAG	2 cut(s)	1404, 1520
BstEII	GGTNACC	1 cut(s)	610
BstF5I	GGATG	5 cut(s)	29, 90, 388, 1085, 1285
BstFNI	CGCG	1 cut(s)	1571
BstH2I	RGCGCY	1 cut(s)	1460
BstHHI	GCGC	3 cut(s)	514, 1257, 1459
BstKTI	GATC	5 cut(s)	124, 976, 998, 1539, 1553
BstMAI	GTCTC	2 cut(s)	1177, 1496
BstMBI	GATC	5 cut(s)	121, 973, 995, 1536, 1550
BstMWI	GCNNNNNNNGC	6 cut(s)	34, 770, 779, 1040, 1459, 1478
BstNI	CCWGG	3 cut(s)	1277, 1341, 1545
BstNSI	RCATGY	2 cut(s)	562, 1232
BstPAI	GACNNNNGTC	1 cut(s)	642
BstPI	GGTNACC	1 cut(s)	610
BstSCI	CCNGG	4 cut(s)	811, 1275, 1339, 1543
BstSFI	CTRYAG	2 cut(s)	1035, 1236
BstUI	CGCG	1 cut(s)	1571
BstV1I	GCAGC	6 cut(s)	97, 178, 1021, 1165, 1264, 1446
BstV2I	GAAGAC	3 cut(s)	60, 347, 788
BstX2I	RGATCY	2 cut(s)	1536, 1550
BstXI	CCANNNNNNTGG	1 cut(s)	1496
BstYI	RGATCY	2 cut(s)	1536, 1550
BsuRI	GGCC	6 cut(s)	549, 782, 1027, 1043, 1336, 1525
BtgZI	GCGATG	1 cut(s)	779
BtsCI	GGATG	5 cut(s)	29, 90, 388, 1085, 1285
BtsI	GCAGTG	1 cut(s)	856
BtsIMutI	CAGTG	5 cut(s)	173, 678, 856, 1195, 1496
BveI	ACCTGC	1 cut(s)	1477
Cac8I	GCNNGC	4 cut(s)	273, 1230, 1439, 1455
CfoI	GCGC	3 cut(s)	514, 1257, 1459
Cfr13I	GGNCC	3 cut(s)	1012, 1042, 1335
CseI	GACGC	1 cut(s)	1451
Csp6I	GTAC	7 cut(s)	12, 223, 439, 472, 676, 703, 719
CviQI	GTAC	7 cut(s)	12, 223, 439, 472, 676, 703, 719
DdeI	CTNAG	2 cut(s)	1404, 1520
DpnI	GATC	5 cut(s)	123, 975, 997, 1538, 1552
DpnII	GATC	5 cut(s)	121, 973, 995, 1536, 1550
DraIII	CACNNNGTG	1 cut(s)	1388
EaeI	YGGCCR	1 cut(s)	780
Eam1104I	CTCTTC	1 cut(s)	1301
EarI	CTCTTC	1 cut(s)	1301
Ecl136II	GAGCTC	2 cut(s)	710, 1311
Eco147I	AGGCCT	2 cut(s)	549, 1525
Eco24I	GRGCYC	4 cut(s)	712, 1313, 1381, 1489
Eco31I	GGTCTC	1 cut(s)	1177
Eco32I	GATATC	1 cut(s)	910
Eco47I	GGWCC	1 cut(s)	1012
Eco47III	AGCGCT	1 cut(s)	1458
Eco53kI	GAGCTC	2 cut(s)	710, 1311
Eco57I	CTGAAG	4 cut(s)	152, 528, 710, 735
Eco72I	CACGTG	1 cut(s)	1385
Eco88I	CYCGRG	1 cut(s)	651
Eco91I	GGTNACC	1 cut(s)	610
EcoICRI	GAGCTC	2 cut(s)	710, 1311
EcoO109I	RGGNCCY	2 cut(s)	1012, 1042
EcoO65I	GGTNACC	1 cut(s)	610
EcoRII	CCWGG	3 cut(s)	1275, 1339, 1543
EcoRV	GATATC	1 cut(s)	910
EcoT22I	ATGCAT	2 cut(s)	564, 1402
EcoT38I	GRGCYC	4 cut(s)	712, 1313, 1381, 1489
FalI	AAGNNNNNCTT	4 cut(s)	178, 210, 708, 740
FaqI	GGGAC	3 cut(s)	1025, 1080, 1192
FauI	CCCGC	2 cut(s)	1442, 1564
FbaI	TGATCA	1 cut(s)	973
FblI	GTMKAC	1 cut(s)	692
Fnu4HI	GCNGC	6 cut(s)	86, 192, 1035, 1154, 1253, 1460
FokI	GGATG	5 cut(s)	16, 77, 375, 1072, 1292
FriOI	GRGCYC	4 cut(s)	712, 1313, 1381, 1489
Fsp4HI	GCNGC	6 cut(s)	86, 192, 1035, 1154, 1253, 1460
FspBI	CTAG	4 cut(s)	969, 1113, 1164, 1203
GlaI	GCGC	3 cut(s)	513, 1256, 1458
GluI	GCNGC	6 cut(s)	86, 192, 1035, 1154, 1253, 1460
GsuI	CTGGAG	2 cut(s)	1031, 1503
HaeII	RGCGCY	1 cut(s)	1460
HaeIII	GGCC	6 cut(s)	549, 782, 1027, 1043, 1336, 1525
HapII	CCGG	1 cut(s)	812
HgaI	GACGC	1 cut(s)	1451
HhaI	GCGC	3 cut(s)	514, 1257, 1459
Hin6I	GCGC	3 cut(s)	512, 1255, 1457
HinP1I	GCGC	3 cut(s)	512, 1255, 1457
HincII	GTYRAC	1 cut(s)	693
HindII	GTYRAC	1 cut(s)	693
HindIII	AAGCTT	1 cut(s)	497
HinfI	GANTC	5 cut(s)	159, 385, 662, 875, 958
HpaII	CCGG	1 cut(s)	812
HphI	GGTGA	2 cut(s)	257, 305
Hpy166II	GTNNAC	4 cut(s)	678, 693, 1366, 1466
Hpy188I	TCNGA	7 cut(s)	132, 422, 521, 957, 1396, 1405, 1563
Hpy188III	TCNNGA	8 cut(s)	50, 207, 359, 584, 653, 713, 1063, 1532
Hpy8I	GTNNAC	4 cut(s)	678, 693, 1366, 1466
HpyAV	CCTTC	3 cut(s)	1026, 1100, 1224
HpyCH4III	ACNGT	3 cut(s)	265, 675, 930
HpyCH4IV	ACGT	2 cut(s)	687, 1384
HpyF10VI	GCNNNNNNNGC	6 cut(s)	34, 770, 779, 1040, 1459, 1478
HpyF3I	CTNAG	2 cut(s)	1404, 1520
HpySE526I	ACGT	2 cut(s)	687, 1384
HspAI	GCGC	3 cut(s)	512, 1255, 1457
KflI	GGGWCCC	1 cut(s)	1012
KpnI	GGTACC	1 cut(s)	706
Ksp22I	TGATCA	1 cut(s)	973
Kzo9I	GATC	5 cut(s)	121, 973, 995, 1536, 1550
LguI	GCTCTTC	1 cut(s)	1301
LmnI	GCTCC	5 cut(s)	715, 1142, 1150, 1384, 1484
Lsp1109I	GCAGC	6 cut(s)	97, 178, 1021, 1165, 1264, 1446
LweI	GCATC	4 cut(s)	571, 1270, 1387, 1409
MaeI	CTAG	4 cut(s)	969, 1113, 1164, 1203
MaeII	ACGT	2 cut(s)	687, 1384
MaeIII	GTNAC	2 cut(s)	584, 610
MalI	GATC	5 cut(s)	123, 975, 997, 1538, 1552
MboI	GATC	5 cut(s)	121, 973, 995, 1536, 1550
MfeI	CAATTG	1 cut(s)	1425
MflI	RGATCY	2 cut(s)	1536, 1550
MhlI	GDGCHC	4 cut(s)	712, 1313, 1381, 1489
MluCI	AATT	7 cut(s)	523, 657, 843, 920, 981, 1259, 1425
MlyI	GAGTC	1 cut(s)	168
MmeI	TCCRAC	2 cut(s)	429, 1564
MnlI	CCTC	9 cut(s)	213, 214, 334, 813, 998, 1017, 1033, 1055, 1369
Mph1103I	ATGCAT	2 cut(s)	564, 1402
MseI	TTAA	7 cut(s)	117, 230, 279, 366, 465, 591, 623
MslI	CAYNNNNRTG	2 cut(s)	567, 1247
MspA1I	CMGCKG	1 cut(s)	1034
MspCI	CTTAAG	1 cut(s)	590
MspI	CCGG	1 cut(s)	812
MspR9I	CCNGG	4 cut(s)	813, 1277, 1341, 1545
MunI	CAATTG	1 cut(s)	1425
MvaI	CCWGG	3 cut(s)	1277, 1341, 1545
MvnI	CGCG	1 cut(s)	1571
MwoI	GCNNNNNNNGC	6 cut(s)	34, 770, 779, 1040, 1459, 1478
NciI	CCSGG	1 cut(s)	813
NdeII	GATC	5 cut(s)	121, 973, 995, 1536, 1550
NlaIV	GGNNCC	7 cut(s)	704, 1013, 1014, 1337, 1380, 1432, 1486
NmeAIII	GCCGAG	1 cut(s)	808
NmuCI	GTSAC	1 cut(s)	584
NsiI	ATGCAT	2 cut(s)	564, 1402
NspI	RCATGY	2 cut(s)	562, 1232
OliI	CACNNNNGTG	1 cut(s)	1247
PaeI	GCATGC	1 cut(s)	1232
PaqCI	CACCTGC	1 cut(s)	1477
PceI	AGGCCT	2 cut(s)	549, 1525
PciSI	GCTCTTC	1 cut(s)	1301
PcsI	WCGNNNNNNNCGW	2 cut(s)	703, 1381
PfeI	GAWTC	4 cut(s)	385, 662, 875, 958
PflMI	CCANNNNNTGG	1 cut(s)	1130
PkrI	GCNGC	6 cut(s)	87, 193, 1036, 1155, 1254, 1461
PleI	GAGTC	1 cut(s)	167
PmaCI	CACGTG	1 cut(s)	1385
PmlI	CACGTG	1 cut(s)	1385
PpsI	GAGTC	1 cut(s)	167
Ppu21I	YACGTR	2 cut(s)	688, 1385
PpuMI	RGGWCCY	1 cut(s)	1012
PshAI	GACNNNNGTC	1 cut(s)	642
PshBI	ATTAAT	1 cut(s)	279
Psp124BI	GAGCTC	2 cut(s)	712, 1313
Psp5II	RGGWCCY	1 cut(s)	1012
Psp6I	CCWGG	3 cut(s)	1275, 1339, 1543
PspCI	CACGTG	1 cut(s)	1385
PspEI	GGTNACC	1 cut(s)	610
PspGI	CCWGG	3 cut(s)	1275, 1339, 1543
PspN4I	GGNNCC	7 cut(s)	704, 1013, 1014, 1337, 1380, 1432, 1486
PspPI	GGNCC	3 cut(s)	1012, 1042, 1335
PspPPI	RGGWCCY	1 cut(s)	1012
PstI	CTGCAG	1 cut(s)	1039
PsuI	RGATCY	2 cut(s)	1536, 1550
PvuII	CAGCTG	1 cut(s)	1034
RsaI	GTAC	7 cut(s)	13, 224, 440, 473, 677, 704, 720
RsaNI	GTAC	7 cut(s)	12, 223, 439, 472, 676, 703, 719
RseI	CAYNNNNRTG	2 cut(s)	567, 1247
SacI	GAGCTC	2 cut(s)	712, 1313
SalI	GTCGAC	1 cut(s)	691
SapI	GCTCTTC	1 cut(s)	1301
SaqAI	TTAA	7 cut(s)	117, 230, 279, 366, 465, 591, 623
SatI	GCNGC	6 cut(s)	86, 192, 1035, 1154, 1253, 1460
Sau3AI	GATC	5 cut(s)	121, 973, 995, 1536, 1550
Sau96I	GGNCC	3 cut(s)	1012, 1042, 1335
ScaI	AGTACT	1 cut(s)	720
SchI	GAGTC	1 cut(s)	168
ScrFI	CCNGG	4 cut(s)	813, 1277, 1341, 1545
SduI	GDGCHC	4 cut(s)	712, 1313, 1381, 1489
SfaNI	GCATC	4 cut(s)	571, 1270, 1387, 1409
SfcI	CTRYAG	2 cut(s)	1035, 1236
SinI	GGWCC	1 cut(s)	1012
SmiMI	CAYNNNNRTG	2 cut(s)	567, 1247
SmlI	CTYRAG	2 cut(s)	407, 590
SmoI	CTYRAG	2 cut(s)	407, 590
SphI	GCATGC	1 cut(s)	1232
Sse9I	AATT	7 cut(s)	523, 657, 843, 920, 981, 1259, 1425
SseBI	AGGCCT	2 cut(s)	549, 1525
SsiI	CCGC	2 cut(s)	1435, 1571
SspI	AATATT	1 cut(s)	397
SspMI	CTAG	4 cut(s)	969, 1113, 1164, 1203
SstI	GAGCTC	2 cut(s)	712, 1313
StuI	AGGCCT	2 cut(s)	549, 1525
StyD4I	CCNGG	4 cut(s)	811, 1275, 1339, 1543
TaaI	ACNGT	3 cut(s)	265, 675, 930
TaiI	ACGT	2 cut(s)	690, 1387
TaqI	TCGA	2 cut(s)	358, 692
TasI	AATT	7 cut(s)	523, 657, 843, 920, 981, 1259, 1425
TatI	WGTACW	2 cut(s)	438, 718
TfiI	GAWTC	4 cut(s)	385, 662, 875, 958
Tru1I	TTAA	7 cut(s)	117, 230, 279, 366, 465, 591, 623
Tru9I	TTAA	7 cut(s)	117, 230, 279, 366, 465, 591, 623
TscAI	CASTG	5 cut(s)	180, 685, 856, 1195, 1496
TseFI	GTSAC	1 cut(s)	584
TseI	GCWGC	6 cut(s)	85, 191, 1034, 1153, 1252, 1459
Tsp45I	GTSAC	1 cut(s)	584
TspDTI	ATGAA	9 cut(s)	86, 324, 332, 398, 497, 569, 867, 932, 1490
TspRI	CASTG	5 cut(s)	180, 685, 856, 1195, 1496
Van91I	CCANNNNNTGG	1 cut(s)	1130
Vha464I	CTTAAG	1 cut(s)	590
VpaK11BI	GGWCC	1 cut(s)	1012
VspI	ATTAAT	1 cut(s)	279
XapI	RAATTY	1 cut(s)	843
XceI	RCATGY	2 cut(s)	562, 1232
XmiI	GTMKAC	1 cut(s)	692
XspI	CTAG	4 cut(s)	969, 1113, 1164, 1203
ZrmI	AGTACT	1 cut(s)	720
Zsp2I	ATGCAT	2 cut(s)	564, 1402

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.