Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000445

Physical Location & Seq

Genomic Coordinates Forward (+)

5278426 .. 5279514

Gene Structure 1089 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00283340.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1089 bp

ATGGAGAGGTACGAGTTAATAAAGAAAGTTGGCCATGGAGCATTTGGGACTGTCTGGCGAGGTAAAAATAAGCAGACTGGTGAAGTTGTTGCAATTAAAGAACTCAAGAAAAGATACTATTCATGGGATGAGTGCATCAGTCTTCGAGAAGTTAAGTCATTGCAGAAAATGAATCATCCAAACATTGTGGAGCTAAAACATTTGATCCTATCAGAAAATAATATTTTGTACTTTGTGTTCGACTATATGGAGTTCAACCTGTACCAGCTTATGAAAGATAAGGTAATGCCTTTCCCTGAATCTCAAGTGAGAGATTGGTGTTTAGAAGTTTTCAAAGGCCTTGCTCATATGCATCAACGCGGATATTTTCATCGCGATCTAAAGCCGGAGAACTTGTTGCTTACCAAAGATTTCAAAATCAAGATTGCAGATCTTGGTTTTGCTCGGGAAATCGATTCCCAACCACCCTATACTGAATATGTGTCGACACGCTGGTACCGAGCTCCGGAACTCTTGTTCCCAGGTTTGTATAGCTCTAAAGTTGATATGTGGGCAATGGGTGCAATCATGGCCGAGTTGCTTACTCTCCGCCCTCTATTTCCTGGTATTAGTCAAGCAGATGAAATGTACAAAATTTGCAGTGTACTTGGCACCCCAACCGAGGATTCATGGGCCGATGGGCTTCGTCTTGCAAGAGATATGAACTACCAGTTTCCACAGTTGGCTGGTGTTCATCTTTCGTCACTTATTCCATCAGTTAGTGATCATGCAATTAGCCTCATTAGTTCACTTTGTTCTTGGGACCCGTCCAAGAGGCCAACAGCTGCAGAGGCCCTCCACCATCCTTTCTTCCAGAGTTGCTATTATGTTCCTCCAACAACTGCTGGAGCAACAAGGGGAGCGTCGGAGCAGCAAAAATATCTGCCTCCTGGAAAGAGAGTCGATCATATATATTCCTACCTTAGTGAACAAGGGAAGGAACGTTGCACGCGGTACTGTGGGGAAGCCGCTGCATCCGCCTCCCATGAAAGCTGGAGTCCAACGGATTGGCAAGTCAAGAGAATCAACCGTTACATTGTCAACAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009987 GO:0010468 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019222 GO:0019538 GO:0023052 GO:0035556 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0065007 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase

Protein Analysis

362

Amino Acids

41.78

Weight (kDa)

8.32

Isoelectric Point (pI)

43.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	4 - 284	8.2e-70	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	5 - 203	2.1e-37	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000445)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19110 AT4G19110 AT4G19110 AT5G45430 AT5G45430
fragaria_vesca	FvH4_2g16890 FvH4_5g19220 FvH4_5g19340 FvH4_5g19350 FvH4_5g19360 FvH4_5g23910 FvH4_7g27810
malus_domestica	MD00G1001400.v1.1 MD04G1058900.v1.1 MD04G1059300.v1.1 MD04G1059500.v1.1 MD04G1059600.v1.1 MD04G1059800.v1.1 MD04G1061700.v1.1 MD04G1061800.v1.1 MD06G1014800.v1.1 MD06G1052900.v1.1 MD06G1055500.v1.1
prunus_persica	Prupe.5G021300_v2.0.a1 Prupe.5G065900_v2.0.a1 Prupe.5G066500_v2.0.a1
pyrus_communis	pycom06g04440
rosa_chinensis	RchiOBHm_Chr1g0374681 RchiOBHm_Chr2g0120471 RchiOBHm_Chr2g0120711 RchiOBHm_Chr7g0203821 RchiOBHm_Chr7g0203861 RchiOBHm_Chr7g0208401 RchiOBHm_Chr7g0209011 RchiOBHm_Chr7g0213341
rosa_laevigata	RLG00000001348 RLG00000002813 RLG00000003173 RLG00000003212 RLG00000003503 RLG00000022835 RLG00000026723 RLG00000035532
rosa_multiflora	Rmu_co7960007.1_g000001 Rmu_co7963796.1_g000001 Rmu_co8519951.1_g000002 Rmu_sc0002038.1_g000009 Rmu_sc0004947.1_g000015 Rmu_sc0007490.1_g000005 Rmu_sc0011180.1_g000003 Rmu_sc0015273.1_g000013 Rmu_ssc0000190.1_g000014 Rmu_ssc0000372.1_g000031
rosa_roxburghii	Rroxscaffold_3G00246080 Rroxscaffold_3G00249860 Rroxscaffold_3G00249870 Rroxscaffold_3G00253500 Rroxscaffold_4G00283340
rosa_rugosa	Rorug01G0384300 Rorug07G0079000 Rorug07G0079000 Rorug07G0079000 Rorug07G0108300 Rorug07G0141200
rosa_samantha	Rh1AG395700 Rh1BG359900 Rh1DG006600 Rh1DG390900 Rh2AG287100 Rh3BG335800 Rh3CG321100 Rh5DG116800 Rh7AG273000 Rh7BG207600 Rh7BG207800 Rh7BG237700 Rh7BG268400 Rh7CG221100 Rh7CG221300 Rh7CG254000 Rh7CG257900 Rh7CG292200 Rh7DG215700 Rh7DG215900 Rh7DG244500 Rh7DG249800 Rh7DG280700
rosa_wichuraiana	Rw0G010370 Rw1G035090 Rw2G023020 Rw7G018200 Rw7G020570 Rw7G023690

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	495
AccB1I	GGYRCC	2 cut(s)	495, 650
AccI	GTMKAC	1 cut(s)	485
AccII	CGCG	3 cut(s)	360, 375, 991
AccIII	TCCGGA	1 cut(s)	505
AciI	CCGC	5 cut(s)	360, 589, 991, 1008, 1017
AclI	AACGTT	1 cut(s)	982
AclWI	GGATC	1 cut(s)	199
AcoI	YGGCCR	2 cut(s)	31, 570
AcsI	RAATTY	1 cut(s)	633
AfaI	GTAC	7 cut(s)	11, 230, 263, 497, 629, 645, 995
AfiI	CCNNNNNNNGG	2 cut(s)	505, 661
AgsI	TTSAA	3 cut(s)	256, 334, 415
AjnI	CCWGG	3 cut(s)	520, 601, 928
AjuI	GAANNNNNNNTTGG	2 cut(s)	649, 681
AloI	GAACNNNNNNTCC	4 cut(s)	500, 501, 532, 533
AluBI	AGCT	6 cut(s)	193, 268, 503, 534, 824, 1032
AluI	AGCT	6 cut(s)	193, 268, 503, 534, 824, 1032
Alw21I	GWGCWC	1 cut(s)	505
AlwI	GGATC	1 cut(s)	199
Ama87I	CYCGRG	1 cut(s)	444
Aor13HI	TCCGGA	1 cut(s)	505
AoxI	GGCC	6 cut(s)	31, 337, 570, 672, 815, 831
ApeKI	GCWGC	3 cut(s)	824, 910, 1010
ApoI	RAATTY	1 cut(s)	633
Asp718I	GGTACC	1 cut(s)	495
AspS9I	GGNCC	3 cut(s)	672, 802, 832
AsuHPI	GGTGA	1 cut(s)	92
AvaI	CYCGRG	1 cut(s)	444
AvaII	GGWCC	1 cut(s)	802
BaeI	ACNNNNGTAYC	2 cut(s)	479, 512
BalI	TGGCCA	1 cut(s)	33
BanI	GGYRCC	2 cut(s)	495, 650
BanII	GRGCYC	1 cut(s)	505
BbsI	GAAGAC	1 cut(s)	134
Bbv12I	GWGCWC	1 cut(s)	505
BbvI	GCAGC	3 cut(s)	811, 922, 997
BccI	CCATC	3 cut(s)	671, 760, 849
BciT130I	CCWGG	3 cut(s)	522, 603, 930
BclI	TGATCA	1 cut(s)	763
BfmI	CTRYAG	1 cut(s)	825
BglII	AGATCT	1 cut(s)	430
BisI	GCNGC	4 cut(s)	825, 911, 1008, 1011
BlsI	GCNGC	4 cut(s)	826, 912, 1009, 1012
Bme1390I	CCNGG	3 cut(s)	522, 603, 930
Bme18I	GGWCC	1 cut(s)	802
BmeT110I	CYCGRG	1 cut(s)	444
BmgT120I	GGNCC	3 cut(s)	672, 802, 832
BmiI	GGNNCC	4 cut(s)	497, 652, 803, 804
BmrFI	CCNGG	3 cut(s)	522, 603, 930
BmsI	GCATC	3 cut(s)	144, 361, 1022
BpiI	GAAGAC	1 cut(s)	134
BpmI	CTGGAG	2 cut(s)	906, 1054
BpuEI	CTTGAG	2 cut(s)	89, 288
Bsa29I	ATCGAT	1 cut(s)	453
BsaJI	CCNNGG	3 cut(s)	34, 520, 660
BsaWI	WCCGGW	1 cut(s)	505
BsaXI	ACNNNNNCTCC	2 cut(s)	380, 410
Bsc4I	CCNNNNNNNGG	2 cut(s)	505, 661
Bse1I	ACTGG	2 cut(s)	82, 709
Bse3DI	GCAATG	2 cut(s)	158, 561
BseAI	TCCGGA	1 cut(s)	505
BseBI	CCWGG	3 cut(s)	522, 603, 930
BseCI	ATCGAT	1 cut(s)	453
BseDI	CCNNGG	3 cut(s)	34, 520, 660
BseGI	GGATG	4 cut(s)	133, 175, 841, 1013
BseLI	CCNNNNNNNGG	2 cut(s)	505, 661
BseMI	GCAATG	2 cut(s)	158, 561
BseNI	ACTGG	2 cut(s)	82, 709
BseXI	GCAGC	3 cut(s)	811, 922, 997
Bsh1236I	CGCG	3 cut(s)	360, 375, 991
BshFI	GGCC	6 cut(s)	33, 339, 572, 674, 817, 833
BshNI	GGYRCC	2 cut(s)	495, 650
BshVI	ATCGAT	1 cut(s)	453
BsiHKAI	GWGCWC	1 cut(s)	505
BsiHKCI	CYCGRG	1 cut(s)	444
BsiSI	CCGG	2 cut(s)	386, 506
BslFI	GGGAC	2 cut(s)	61, 815
BslI	CCNNNNNNNGG	2 cut(s)	505, 661
BsmFI	GGGAC	2 cut(s)	61, 815
BsnI	GGCC	6 cut(s)	33, 339, 572, 674, 817, 833
BsoBI	CYCGRG	1 cut(s)	444
Bsp1286I	GDGCHC	1 cut(s)	505
Bsp13I	TCCGGA	1 cut(s)	505
Bsp1407I	TGTACA	1 cut(s)	627
Bsp143I	GATC	5 cut(s)	204, 376, 430, 763, 943
Bsp19I	CCATGG	1 cut(s)	34
Bsp68I	TCGCGA	1 cut(s)	375
BspACI	CCGC	5 cut(s)	360, 589, 991, 1008, 1017
BspANI	GGCC	6 cut(s)	33, 339, 572, 674, 817, 833
BspDI	ATCGAT	1 cut(s)	453
BspEI	TCCGGA	1 cut(s)	505
BspFNI	CGCG	3 cut(s)	360, 375, 991
BspLI	GGNNCC	4 cut(s)	497, 652, 803, 804
BspMAI	CTGCAG	1 cut(s)	829
BspPI	GGATC	1 cut(s)	199
BspT107I	GGYRCC	2 cut(s)	495, 650
BsrDI	GCAATG	2 cut(s)	158, 561
BsrGI	TGTACA	1 cut(s)	627
BsrI	ACTGG	2 cut(s)	82, 709
BssECI	CCNNGG	3 cut(s)	34, 520, 660
BssMI	GATC	5 cut(s)	204, 376, 430, 763, 943
BssT1I	CCWWGG	1 cut(s)	34
Bst2UI	CCWGG	3 cut(s)	522, 603, 930
Bst4CI	ACNGT	4 cut(s)	52, 720, 998, 1070
BstAPI	GCANNNNNTGC	1 cut(s)	560
BstAUI	TGTACA	1 cut(s)	627
BstC8I	GCNNGC	1 cut(s)	989
BstDEI	CTNAG	1 cut(s)	962
BstDSI	CCRYGG	1 cut(s)	34
BstF5I	GGATG	4 cut(s)	133, 175, 841, 1013
BstFNI	CGCG	3 cut(s)	360, 375, 991
BstKTI	GATC	5 cut(s)	207, 379, 433, 766, 946
BstMBI	GATC	5 cut(s)	204, 376, 430, 763, 943
BstMWI	GCNNNNNNNGC	4 cut(s)	560, 569, 830, 1016
BstNI	CCWGG	3 cut(s)	522, 603, 930
BstSCI	CCNGG	3 cut(s)	520, 601, 928
BstSFI	CTRYAG	1 cut(s)	825
BstUI	CGCG	3 cut(s)	360, 375, 991
BstV1I	GCAGC	3 cut(s)	811, 922, 997
BstV2I	GAAGAC	1 cut(s)	134
BstX2I	RGATCY	1 cut(s)	430
BstXI	CCANNNNNNTGG	1 cut(s)	1047
BstYI	RGATCY	1 cut(s)	430
Bsu15I	ATCGAT	1 cut(s)	453
BsuRI	GGCC	6 cut(s)	33, 339, 572, 674, 817, 833
BsuTUI	ATCGAT	1 cut(s)	453
BtgI	CCRYGG	1 cut(s)	34
BtgZI	GCGATG	1 cut(s)	356
BtsCI	GGATG	4 cut(s)	133, 175, 841, 1013
BtsI	GCAGTG	1 cut(s)	646
BtsIMutI	CAGTG	1 cut(s)	646
BtuMI	TCGCGA	1 cut(s)	375
Cac8I	GCNNGC	1 cut(s)	989
Cfr13I	GGNCC	3 cut(s)	672, 802, 832
ClaI	ATCGAT	1 cut(s)	453
CseI	GACGC	1 cut(s)	891
Csp6I	GTAC	7 cut(s)	10, 229, 262, 496, 628, 644, 994
CspCI	CAANNNNNGTGG	2 cut(s)	168, 203
CviAII	CATG	6 cut(s)	35, 123, 568, 669, 767, 1025
CviQI	GTAC	7 cut(s)	10, 229, 262, 496, 628, 644, 994
DdeI	CTNAG	1 cut(s)	962
DpnI	GATC	5 cut(s)	206, 378, 432, 765, 945
DpnII	GATC	5 cut(s)	204, 376, 430, 763, 943
EaeI	YGGCCR	2 cut(s)	31, 570
EciI	GGCGGA	2 cut(s)	578, 1006
Ecl136II	GAGCTC	1 cut(s)	503
Eco130I	CCWWGG	1 cut(s)	34
Eco147I	AGGCCT	1 cut(s)	339
Eco24I	GRGCYC	1 cut(s)	505
Eco47I	GGWCC	1 cut(s)	802
Eco53kI	GAGCTC	1 cut(s)	503
Eco88I	CYCGRG	1 cut(s)	444
EcoICRI	GAGCTC	1 cut(s)	503
EcoO109I	RGGNCCY	2 cut(s)	802, 832
EcoRII	CCWGG	3 cut(s)	520, 601, 928
EcoT14I	CCWWGG	1 cut(s)	34
EcoT22I	ATGCAT	1 cut(s)	354
EcoT38I	GRGCYC	1 cut(s)	505
ErhI	CCWWGG	1 cut(s)	34
FaeI	CATG	6 cut(s)	38, 126, 571, 672, 770, 1028
FaqI	GGGAC	2 cut(s)	61, 815
FatI	CATG	6 cut(s)	34, 122, 567, 668, 766, 1024
FauNDI	CATATG	1 cut(s)	348
FbaI	TGATCA	1 cut(s)	763
FblI	GTMKAC	1 cut(s)	485
Fnu4HI	GCNGC	4 cut(s)	825, 911, 1008, 1011
FokI	GGATG	4 cut(s)	140, 162, 828, 1000
FriOI	GRGCYC	1 cut(s)	505
Fsp4HI	GCNGC	4 cut(s)	825, 911, 1008, 1011
GluI	GCNGC	4 cut(s)	825, 911, 1008, 1011
GsuI	CTGGAG	2 cut(s)	906, 1054
HaeIII	GGCC	6 cut(s)	33, 339, 572, 674, 817, 833
HapII	CCGG	2 cut(s)	386, 506
HgaI	GACGC	1 cut(s)	891
Hin1II	CATG	6 cut(s)	38, 126, 571, 672, 770, 1028
HincII	GTYRAC	2 cut(s)	486, 1081
HindII	GTYRAC	2 cut(s)	486, 1081
HinfI	GANTC	7 cut(s)	172, 299, 455, 665, 939, 1036, 1062
HpaII	CCGG	2 cut(s)	386, 506
HphI	GGTGA	1 cut(s)	92
Hpy166II	GTNNAC	5 cut(s)	486, 644, 788, 968, 1081
Hpy188I	TCNGA	2 cut(s)	214, 907
Hpy188III	TCNNGA	8 cut(s)	106, 146, 374, 421, 446, 506, 853, 1057
Hpy8I	GTNNAC	5 cut(s)	486, 644, 788, 968, 1081
Hpy99I	CGWCG	1 cut(s)	907
HpyAV	CCTTC	1 cut(s)	970
HpyCH4III	ACNGT	4 cut(s)	52, 720, 998, 1070
HpyCH4IV	ACGT	1 cut(s)	982
HpyF10VI	GCNNNNNNNGC	4 cut(s)	560, 569, 830, 1016
HpyF3I	CTNAG	1 cut(s)	962
HpySE526I	ACGT	1 cut(s)	982
Hsp92II	CATG	6 cut(s)	38, 126, 571, 672, 770, 1028
KflI	GGGWCCC	1 cut(s)	802
Kpn2I	TCCGGA	1 cut(s)	505
KpnI	GGTACC	1 cut(s)	499
Ksp22I	TGATCA	1 cut(s)	763
Kzo9I	GATC	5 cut(s)	204, 376, 430, 763, 943
LmnI	GCTCC	6 cut(s)	38, 190, 508, 887, 899, 907
Lsp1109I	GCAGC	3 cut(s)	811, 922, 997
LweI	GCATC	3 cut(s)	144, 361, 1022
MaeII	ACGT	1 cut(s)	982
MaeIII	GTNAC	2 cut(s)	741, 1070
MalI	GATC	5 cut(s)	206, 378, 432, 765, 945
MboI	GATC	5 cut(s)	204, 376, 430, 763, 943
MboII	GAAGA	2 cut(s)	134, 841
MflI	RGATCY	1 cut(s)	430
MhlI	GDGCHC	1 cut(s)	505
MlsI	TGGCCA	1 cut(s)	33
MluCI	AATT	3 cut(s)	93, 633, 771
MluNI	TGGCCA	1 cut(s)	33
MlyI	GAGTC	2 cut(s)	948, 1045
MmeI	TCCRAC	3 cut(s)	885, 899, 1064
Mox20I	TGGCCA	1 cut(s)	33
Mph1103I	ATGCAT	1 cut(s)	354
MroI	TCCGGA	1 cut(s)	505
MscI	TGGCCA	1 cut(s)	33
MseI	TTAA	3 cut(s)	17, 96, 153
Msp20I	TGGCCA	1 cut(s)	33
MspA1I	CMGCKG	2 cut(s)	824, 1010
MspI	CCGG	2 cut(s)	386, 506
MspR9I	CCNGG	3 cut(s)	522, 603, 930
MvaI	CCWGG	3 cut(s)	522, 603, 930
MvnI	CGCG	3 cut(s)	360, 375, 991
MwoI	GCNNNNNNNGC	4 cut(s)	560, 569, 830, 1016
NcoI	CCATGG	1 cut(s)	34
NdeI	CATATG	1 cut(s)	348
NdeII	GATC	5 cut(s)	204, 376, 430, 763, 943
NlaIII	CATG	6 cut(s)	38, 126, 571, 672, 770, 1028
NlaIV	GGNNCC	4 cut(s)	497, 652, 803, 804
NmeAIII	GCCGAG	1 cut(s)	598
NmuCI	GTSAC	1 cut(s)	741
NruI	TCGCGA	1 cut(s)	375
NsiI	ATGCAT	1 cut(s)	354
PceI	AGGCCT	1 cut(s)	339
PcsI	WCGNNNNNNNCGW	1 cut(s)	496
PfeI	GAWTC	5 cut(s)	172, 299, 455, 665, 1062
PfoI	TCCNGGA	1 cut(s)	928
PkrI	GCNGC	4 cut(s)	826, 912, 1009, 1012
PleI	GAGTC	2 cut(s)	947, 1044
PpsI	GAGTC	2 cut(s)	947, 1044
PpuMI	RGGWCCY	1 cut(s)	802
Psp124BI	GAGCTC	1 cut(s)	505
Psp1406I	AACGTT	1 cut(s)	982
Psp5II	RGGWCCY	1 cut(s)	802
Psp6I	CCWGG	3 cut(s)	520, 601, 928
PspGI	CCWGG	3 cut(s)	520, 601, 928
PspN4I	GGNNCC	4 cut(s)	497, 652, 803, 804
PspPI	GGNCC	3 cut(s)	672, 802, 832
PspPPI	RGGWCCY	1 cut(s)	802
PsrI	GAACNNNNNNTAC	2 cut(s)	221, 253
PstI	CTGCAG	1 cut(s)	829
PsuI	RGATCY	1 cut(s)	430
PvuII	CAGCTG	1 cut(s)	824
RruI	TCGCGA	1 cut(s)	375
RsaI	GTAC	7 cut(s)	11, 230, 263, 497, 629, 645, 995
RsaNI	GTAC	7 cut(s)	10, 229, 262, 496, 628, 644, 994
SacI	GAGCTC	1 cut(s)	505
SalI	GTCGAC	1 cut(s)	484
SaqAI	TTAA	3 cut(s)	17, 96, 153
SatI	GCNGC	4 cut(s)	825, 911, 1008, 1011
Sau3AI	GATC	5 cut(s)	204, 376, 430, 763, 943
Sau96I	GGNCC	3 cut(s)	672, 802, 832
SchI	GAGTC	2 cut(s)	948, 1045
ScrFI	CCNGG	3 cut(s)	522, 603, 930
SduI	GDGCHC	1 cut(s)	505
SfaNI	GCATC	3 cut(s)	144, 361, 1022
SfcI	CTRYAG	1 cut(s)	825
SinI	GGWCC	1 cut(s)	802
SmlI	CTYRAG	2 cut(s)	104, 303
SmoI	CTYRAG	2 cut(s)	104, 303
Sse9I	AATT	3 cut(s)	93, 633, 771
SseBI	AGGCCT	1 cut(s)	339
SsiI	CCGC	5 cut(s)	360, 589, 991, 1008, 1017
SspI	AATATT	1 cut(s)	223
SstI	GAGCTC	1 cut(s)	505
StuI	AGGCCT	1 cut(s)	339
StyD4I	CCNGG	3 cut(s)	520, 601, 928
StyI	CCWWGG	1 cut(s)	34
TaaI	ACNGT	4 cut(s)	52, 720, 998, 1070
TaiI	ACGT	1 cut(s)	985
TaqI	TCGA	5 cut(s)	145, 240, 453, 485, 942
TasI	AATT	3 cut(s)	93, 633, 771
TatI	WGTACW	3 cut(s)	228, 627, 643
TauI	GCSGC	1 cut(s)	1010
TfiI	GAWTC	5 cut(s)	172, 299, 455, 665, 1062
Tru1I	TTAA	3 cut(s)	17, 96, 153
Tru9I	TTAA	3 cut(s)	17, 96, 153
TscAI	CASTG	1 cut(s)	646
TseFI	GTSAC	1 cut(s)	741
TseI	GCWGC	3 cut(s)	824, 910, 1010
Tsp45I	GTSAC	1 cut(s)	741
TspDTI	ATGAA	9 cut(s)	111, 185, 287, 359, 636, 657, 716, 722, 1041
TspGWI	ACGGA	1 cut(s)	1058
TspRI	CASTG	1 cut(s)	646
VpaK11BI	GGWCC	1 cut(s)	802
XapI	RAATTY	1 cut(s)	633
XcmI	CCANNNNNNNNNTGG	1 cut(s)	41
XmiI	GTMKAC	1 cut(s)	485
Zsp2I	ATGCAT	1 cut(s)	354

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.