Prupe.5G065900_v2.0.a1
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000445
Physical Location & Seq
Reverse (-)
8060713 .. 8062305
1593 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G065900.1

Sequence Viewer

Length: 978 bp
ATGGAGAATTATTGCTTCCTTAAGCCGCTCGGTGAAGGAAGTTTTGGGTTTGTATGGAAGGCTTCGCACAAGGTGACTGGTGAGATTGTTGCAATTAAGCAACTGAAGAATGAGGTATCGAGGTTGACTTCATGGGAGGAGTTTCTCCAAATGGCGGAAGTTGAGTCTCTGTCTCAGTTGAAGAACCACCCGAATATTGTCAATTTGAAACAAGCTTTCGTGGGATTTGATGGCACTGCTTCCCTTGTCTTTGAATTCATGGAGGGCAACTTATTGCAATTTATGCAACTGCACAAGAAGAGATTCAATGAGGCAGAAATCAGGAATGTGTGTCATCAAATTCTTCTTGGGCTAGATCACATGCATAAGAATGGGTGGTGCCACCGTGACCTCAAACCGGAAAACTTGTTGGTGAAGCAAGGTGTGGTCAAGATTGGGGATTTGGGTTCTGCTAAGAAGATTCAGCCGGGCATTCCTTTCAAAGATTATGTCACAACTCGCTGGTACAGAGCCCCGGAGGTGTTGCTCGGCTCACGCTTCTACGATTCCAAGGTTGATATGTGGGCTGTGGGTGTAATCTTGGCTGAGATGTTCAACCTCCGCCCTCTACTTCCCGGTAAAAATAAGGAGGAGCAGCTGTTTTGGATTTGTAGTGTGCTAGGCAGCCCAACCATGAAGTCATGGCCTGAAGGGCAAATTCTTGCAGGGCAGGTTGAGTATCAGTTTCCACAGTTTTCTGGGTTTGGTCTCTCATTTTGCATCCCATCTGCCAGTGAGTCTGCAATTCAGCTTATAACTTCCCTTCTTTCTTGGGATCCTGCTAAGAGGCCGACTGCTGCAGAGGCACTTAAGCATCCCTTTTTCGTCGGCTCCCACCGTATTCCACGTGCCATTCCTCATGCCATTCCCGAGAGACATCACCATATTTTTCCTGACATTGGTGGCATTTCTACAAACGTCTTAAAGACTAGGATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

326

Amino Acids

36.84

Weight (kDa)

8.86

Isoelectric Point (pI)

39.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000445)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19110 AT4G19110 AT4G19110 AT5G45430 AT5G45430
fragaria_vesca FvH4_2g16890 FvH4_5g19220 FvH4_5g19340 FvH4_5g19350 FvH4_5g19360 FvH4_5g23910 FvH4_7g27810
malus_domestica MD00G1001400.v1.1 MD04G1058900.v1.1 MD04G1059300.v1.1 MD04G1059500.v1.1 MD04G1059600.v1.1 MD04G1059800.v1.1 MD04G1061700.v1.1 MD04G1061800.v1.1 MD06G1014800.v1.1 MD06G1052900.v1.1 MD06G1055500.v1.1
prunus_persica Prupe.5G021300_v2.0.a1 Prupe.5G065900_v2.0.a1 Prupe.5G066500_v2.0.a1
pyrus_communis pycom06g04440
rosa_chinensis RchiOBHm_Chr1g0374681 RchiOBHm_Chr2g0120471 RchiOBHm_Chr2g0120711 RchiOBHm_Chr7g0203821 RchiOBHm_Chr7g0203861 RchiOBHm_Chr7g0208401 RchiOBHm_Chr7g0209011 RchiOBHm_Chr7g0213341
rosa_laevigata RLG00000001348 RLG00000002813 RLG00000003173 RLG00000003212 RLG00000003503 RLG00000022835 RLG00000026723 RLG00000035532
rosa_multiflora Rmu_co7960007.1_g000001 Rmu_co7963796.1_g000001 Rmu_co8519951.1_g000002 Rmu_sc0002038.1_g000009 Rmu_sc0004947.1_g000015 Rmu_sc0007490.1_g000005 Rmu_sc0011180.1_g000003 Rmu_sc0015273.1_g000013 Rmu_ssc0000190.1_g000014 Rmu_ssc0000372.1_g000031
rosa_roxburghii Rroxscaffold_3G00246080 Rroxscaffold_3G00249860 Rroxscaffold_3G00249870 Rroxscaffold_3G00253500 Rroxscaffold_4G00283340
rosa_rugosa Rorug01G0384300 Rorug07G0079000 Rorug07G0079000 Rorug07G0079000 Rorug07G0108300 Rorug07G0141200
rosa_samantha Rh1AG395700 Rh1BG359900 Rh1DG006600 Rh1DG390900 Rh2AG287100 Rh3BG335800 Rh3CG321100 Rh5DG116800 Rh7AG273000 Rh7BG207600 Rh7BG207800 Rh7BG237700 Rh7BG268400 Rh7CG221100 Rh7CG221300 Rh7CG254000 Rh7CG257900 Rh7CG292200 Rh7DG215700 Rh7DG215900 Rh7DG244500 Rh7DG249800 Rh7DG280700
rosa_wichuraiana Rw0G010370 Rw1G035090 Rw2G023020 Rw7G018200 Rw7G020570 Rw7G023690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 794
Acc36I ACCTGC 1 cut(s) 700
AccB1I GGYRCC 1 cut(s) 378
AccBSI CCGCTC 1 cut(s) 28
AciI CCGC 3 cut(s) 26, 155, 601
AclWI GGATC 2 cut(s) 809, 822
AcsI RAATTY 3 cut(s) 254, 339, 696
AcuI CTGAAG 2 cut(s) 125, 708
AcvI CACGTG 1 cut(s) 887
AdeI CACNNNGTG 1 cut(s) 73
AfaI GTAC 1 cut(s) 506
AfiI CCNNNNNNNGG 3 cut(s) 154, 397, 938
AflII CTTAAG 2 cut(s) 20, 848
AgsI TTSAA 6 cut(s) 181, 208, 254, 307, 481, 595
AjuI GAANNNNNNNTTGG 2 cut(s) 27, 59
AluBI AGCT 3 cut(s) 215, 637, 790
AluI AGCT 3 cut(s) 215, 637, 790
Alw26I GTCTC 4 cut(s) 171, 177, 752, 907
AlwI GGATC 2 cut(s) 809, 822
Ama87I CYCGRG 1 cut(s) 908
AoxI GGCC 2 cut(s) 683, 827
ApeKI GCWGC 3 cut(s) 634, 663, 836
ApoI RAATTY 3 cut(s) 254, 339, 696
ArsI GACNNNNNNTTYG 2 cut(s) 474, 506
Asp700I GAANNNNTTC 1 cut(s) 302
AsuC2I CCSGG 3 cut(s) 468, 515, 615
AsuHPI GGTGA 5 cut(s) 44, 85, 92, 424, 911
AvaI CYCGRG 1 cut(s) 908
BamHI GGATCC 1 cut(s) 814
BanI GGYRCC 1 cut(s) 378
BanII GRGCYC 1 cut(s) 514
BbrPI CACGTG 1 cut(s) 887
BbvI GCAGC 3 cut(s) 646, 675, 823
BccI CCATC 2 cut(s) 224, 772
BcnI CCSGG 3 cut(s) 468, 515, 615
BcoDI GTCTC 4 cut(s) 171, 177, 752, 907
BfaI CTAG 3 cut(s) 353, 659, 969
BfmI CTRYAG 1 cut(s) 837
BfrI CTTAAG 2 cut(s) 20, 848
BfuAI ACCTGC 1 cut(s) 700
BglI GCCNNNNNGGC 1 cut(s) 691
BisI GCNGC 4 cut(s) 26, 635, 664, 837
BlsI GCNGC 4 cut(s) 27, 636, 665, 838
Bme1390I CCNGG 3 cut(s) 468, 515, 615
BmeT110I CYCGRG 1 cut(s) 908
BmiI GGNNCC 3 cut(s) 380, 816, 871
BmrFI CCNGG 3 cut(s) 468, 515, 615
BmsI GCATC 2 cut(s) 768, 862
BpuMI CCSGG 3 cut(s) 468, 515, 615
BsaAI YACGTR 1 cut(s) 887
BsaI GGTCTC 1 cut(s) 752
BsaJI CCNNGG 2 cut(s) 513, 549
BsaWI WCCGGW 1 cut(s) 397
BsaXI ACNNNNNCTCC 2 cut(s) 623, 653
Bsc4I CCNNNNNNNGG 3 cut(s) 154, 397, 938
Bse1I ACTGG 2 cut(s) 82, 771
BseDI CCNNGG 2 cut(s) 513, 549
BseGI GGATG 3 cut(s) 759, 853, 978
BseLI CCNNNNNNNGG 3 cut(s) 154, 397, 938
BseMII CTCAG 2 cut(s) 188, 576
BseNI ACTGG 2 cut(s) 82, 771
BseRI GAGGAG 2 cut(s) 152, 644
BseXI GCAGC 3 cut(s) 646, 675, 823
BsgI GTGCAG 1 cut(s) 275
BshFI GGCC 2 cut(s) 685, 829
BshNI GGYRCC 1 cut(s) 378
BsiHKCI CYCGRG 1 cut(s) 908
BsiSI CCGG 4 cut(s) 398, 467, 515, 615
BslI CCNNNNNNNGG 3 cut(s) 154, 397, 938
BsmAI GTCTC 4 cut(s) 171, 177, 752, 907
BsmI GAATGC 1 cut(s) 471
BsnI GGCC 2 cut(s) 685, 829
Bso31I GGTCTC 1 cut(s) 752
BsoBI CYCGRG 1 cut(s) 908
Bsp1286I GDGCHC 1 cut(s) 514
Bsp143I GATC 2 cut(s) 355, 814
BspACI CCGC 3 cut(s) 26, 155, 601
BspANI GGCC 2 cut(s) 685, 829
BspCNI CTCAG 2 cut(s) 187, 577
BspLI GGNNCC 3 cut(s) 380, 816, 871
BspMAI CTGCAG 1 cut(s) 841
BspMI ACCTGC 1 cut(s) 700
BspPI GGATC 2 cut(s) 809, 822
BspT107I GGYRCC 1 cut(s) 378
BspTI CTTAAG 2 cut(s) 20, 848
BspTNI GGTCTC 1 cut(s) 752
BsrBI CCGCTC 1 cut(s) 28
BsrI ACTGG 2 cut(s) 82, 771
BssECI CCNNGG 2 cut(s) 513, 549
BssMI GATC 2 cut(s) 355, 814
BssT1I CCWWGG 1 cut(s) 549
Bst4CI ACNGT 3 cut(s) 386, 732, 878
Bst6I CTCTTC 1 cut(s) 293
BstAFI CTTAAG 2 cut(s) 20, 848
BstAPI GCANNNNNTGC 1 cut(s) 283
BstBAI YACGTR 1 cut(s) 887
BstDEI CTNAG 4 cut(s) 174, 453, 585, 822
BstF5I GGATG 3 cut(s) 759, 853, 978
BstKTI GATC 2 cut(s) 358, 817
BstMAI GTCTC 4 cut(s) 171, 177, 752, 907
BstMBI GATC 2 cut(s) 355, 814
BstMWI GCNNNNNNNGC 3 cut(s) 283, 691, 842
BstNSI RCATGY 1 cut(s) 364
BstSCI CCNGG 3 cut(s) 466, 513, 613
BstSFI CTRYAG 1 cut(s) 837
BstV1I GCAGC 3 cut(s) 646, 675, 823
BstX2I RGATCY 1 cut(s) 814
BstYI RGATCY 1 cut(s) 814
BsuRI GGCC 2 cut(s) 685, 829
BtsCI GGATG 3 cut(s) 759, 853, 978
BtsI GCAGTG 1 cut(s) 234
BtsIMutI CAGTG 2 cut(s) 234, 778
BveI ACCTGC 1 cut(s) 700
Csp6I GTAC 1 cut(s) 505
CviAII CATG 6 cut(s) 132, 259, 361, 673, 681, 899
CviQI GTAC 1 cut(s) 505
DdeI CTNAG 4 cut(s) 174, 453, 585, 822
DpnI GATC 2 cut(s) 357, 816
DpnII GATC 2 cut(s) 355, 814
DraIII CACNNNGTG 1 cut(s) 73
Eam1104I CTCTTC 1 cut(s) 293
EarI CTCTTC 1 cut(s) 293
EciI GGCGGA 2 cut(s) 170, 590
Eco130I CCWWGG 1 cut(s) 549
Eco24I GRGCYC 1 cut(s) 514
Eco31I GGTCTC 1 cut(s) 752
Eco57I CTGAAG 2 cut(s) 125, 708
Eco72I CACGTG 1 cut(s) 887
Eco88I CYCGRG 1 cut(s) 908
EcoRI GAATTC 1 cut(s) 254
EcoT14I CCWWGG 1 cut(s) 549
EcoT22I ATGCAT 1 cut(s) 366
EcoT38I GRGCYC 1 cut(s) 514
ErhI CCWWGG 1 cut(s) 549
FaeI CATG 6 cut(s) 135, 262, 364, 676, 684, 902
FalI AAGNNNNNCTT 2 cut(s) 842, 874
FatI CATG 6 cut(s) 131, 258, 360, 672, 680, 898
Fnu4HI GCNGC 4 cut(s) 26, 635, 664, 837
FokI GGATG 2 cut(s) 746, 840
FriOI GRGCYC 1 cut(s) 514
Fsp4HI GCNGC 4 cut(s) 26, 635, 664, 837
FspBI CTAG 3 cut(s) 353, 659, 969
GluI GCNGC 4 cut(s) 26, 635, 664, 837
HaeIII GGCC 2 cut(s) 685, 829
HapII CCGG 4 cut(s) 398, 467, 515, 615
Hin1II CATG 6 cut(s) 135, 262, 364, 676, 684, 902
HincII GTYRAC 1 cut(s) 126
HindII GTYRAC 1 cut(s) 126
HindIII AAGCTT 1 cut(s) 213
HinfI GANTC 5 cut(s) 164, 303, 460, 545, 776
HpaII CCGG 4 cut(s) 398, 467, 515, 615
HphI GGTGA 5 cut(s) 44, 85, 92, 424, 911
Hpy166II GTNNAC 1 cut(s) 126
Hpy188III TCNNGA 4 cut(s) 322, 430, 908, 932
Hpy8I GTNNAC 1 cut(s) 126
Hpy99I CGWCG 1 cut(s) 869
HpyAV CCTTC 4 cut(s) 29, 52, 683, 812
HpyCH4III ACNGT 3 cut(s) 386, 732, 878
HpyCH4IV ACGT 2 cut(s) 886, 957
HpyCH4V TGCA 9 cut(s) 92, 277, 286, 292, 364, 704, 759, 782, 839
HpyF10VI GCNNNNNNNGC 3 cut(s) 283, 691, 842
HpyF3I CTNAG 4 cut(s) 174, 453, 585, 822
HpySE526I ACGT 2 cut(s) 886, 957
Hsp92II CATG 6 cut(s) 135, 262, 364, 676, 684, 902
Kzo9I GATC 2 cut(s) 355, 814
LmnI GCTCC 2 cut(s) 631, 875
Lsp1109I GCAGC 3 cut(s) 646, 675, 823
LweI GCATC 2 cut(s) 768, 862
MaeI CTAG 3 cut(s) 353, 659, 969
MaeII ACGT 2 cut(s) 886, 957
MaeIII GTNAC 3 cut(s) 73, 386, 490
MalI GATC 2 cut(s) 357, 816
MbiI CCGCTC 1 cut(s) 28
MboI GATC 2 cut(s) 355, 814
MboII GAAGA 5 cut(s) 118, 193, 310, 335, 469
MflI RGATCY 1 cut(s) 814
MhlI GDGCHC 1 cut(s) 514
MluCI AATT 8 cut(s) 7, 93, 202, 254, 278, 339, 696, 783
MlyI GAGTC 2 cut(s) 173, 785
Mph1103I ATGCAT 1 cut(s) 366
MroXI GAANNNNTTC 1 cut(s) 302
MseI TTAA 4 cut(s) 21, 96, 849, 962
MslI CAYNNNNRTG 1 cut(s) 369
MspA1I CMGCKG 1 cut(s) 637
MspCI CTTAAG 2 cut(s) 20, 848
MspI CCGG 4 cut(s) 398, 467, 515, 615
MspR9I CCNGG 3 cut(s) 468, 515, 615
Mva1269I GAATGC 1 cut(s) 471
MwoI GCNNNNNNNGC 3 cut(s) 283, 691, 842
NciI CCSGG 3 cut(s) 468, 515, 615
NdeII GATC 2 cut(s) 355, 814
NlaIII CATG 6 cut(s) 135, 262, 364, 676, 684, 902
NlaIV GGNNCC 3 cut(s) 380, 816, 871
NmeAIII GCCGAG 1 cut(s) 507
NmuCI GTSAC 3 cut(s) 73, 386, 490
NsiI ATGCAT 1 cut(s) 366
NspI RCATGY 1 cut(s) 364
PctI GAATGC 1 cut(s) 471
PdmI GAANNNNTTC 1 cut(s) 302
PfeI GAWTC 3 cut(s) 303, 460, 545
PkrI GCNGC 4 cut(s) 27, 636, 665, 838
PleI GAGTC 2 cut(s) 172, 784
PmaCI CACGTG 1 cut(s) 887
PmlI CACGTG 1 cut(s) 887
PpsI GAGTC 2 cut(s) 172, 784
Ppu21I YACGTR 1 cut(s) 887
PsiI TTATAA 1 cut(s) 794
PspCI CACGTG 1 cut(s) 887
PspN4I GGNNCC 3 cut(s) 380, 816, 871
PstI CTGCAG 1 cut(s) 841
PsuI RGATCY 1 cut(s) 814
PvuII CAGCTG 1 cut(s) 637
RsaI GTAC 1 cut(s) 506
RsaNI GTAC 1 cut(s) 505
RseI CAYNNNNRTG 1 cut(s) 369
SaqAI TTAA 4 cut(s) 21, 96, 849, 962
SatI GCNGC 4 cut(s) 26, 635, 664, 837
Sau3AI GATC 2 cut(s) 355, 814
SchI GAGTC 2 cut(s) 173, 785
ScrFI CCNGG 3 cut(s) 468, 515, 615
SduI GDGCHC 1 cut(s) 514
SfaNI GCATC 2 cut(s) 768, 862
SfcI CTRYAG 1 cut(s) 837
SmiMI CAYNNNNRTG 1 cut(s) 369
SmlI CTYRAG 2 cut(s) 20, 848
SmoI CTYRAG 2 cut(s) 20, 848
Sse9I AATT 8 cut(s) 7, 93, 202, 254, 278, 339, 696, 783
SsiI CCGC 3 cut(s) 26, 155, 601
SspI AATATT 1 cut(s) 196
SspMI CTAG 3 cut(s) 353, 659, 969
StyD4I CCNGG 3 cut(s) 466, 513, 613
StyI CCWWGG 1 cut(s) 549
TaaI ACNGT 3 cut(s) 386, 732, 878
TaiI ACGT 2 cut(s) 889, 960
TaqI TCGA 1 cut(s) 119
TasI AATT 8 cut(s) 7, 93, 202, 254, 278, 339, 696, 783
TauI GCSGC 1 cut(s) 28
TfiI GAWTC 3 cut(s) 303, 460, 545
Tru1I TTAA 4 cut(s) 21, 96, 849, 962
Tru9I TTAA 4 cut(s) 21, 96, 849, 962
TscAI CASTG 2 cut(s) 241, 778
TseFI GTSAC 3 cut(s) 73, 386, 490
TseI GCWGC 3 cut(s) 634, 663, 836
Tsp45I GTSAC 3 cut(s) 73, 386, 490
TspDTI ATGAA 3 cut(s) 120, 247, 689
TspRI CASTG 2 cut(s) 241, 778
Vha464I CTTAAG 2 cut(s) 20, 848
XapI RAATTY 3 cut(s) 254, 339, 696
XceI RCATGY 1 cut(s) 364
XmnI GAANNNNTTC 1 cut(s) 302
XspI CTAG 3 cut(s) 353, 659, 969
Zsp2I ATGCAT 1 cut(s) 366
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.