RLG00000003173
ERF Family

Belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0000445
Physical Location & Seq
Forward (+)
45228164 .. 45231001
2838 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003173

Sequence Viewer

Length: 1788 bp
ATGGTCCCTTCATATTCAATTAGCCTAGTAACAAAGTCTGTCTACGATAACATTAATCATCTTTATCTATCGTTCTCAAATCTGCAATCTCTTTCGATCACTTGGAAAAAGCGATGCCCCTGTCCCCTGCCGGCTGCCGTCCAGGGTGACCAAGGCCAGATCCTGGTCCGCCTGAAGCGGTCCCGTTCGTCCTTGTCCTCTGAAGACCCTAGCCAGGACCAGAACCTAACCCTAACCGCTGTTACGGAAGACCCTGATGTCCACGGCCCGGTCCAGCCCGCGATGCCCTCTGAAGACCCTGATGTCCCGGGCGGCCAGCACCACGACCCGGACCCGGACCTGGCCATGCCCCTATCCCCTATCGTGGTTCGCCTGAAGCGGCACCGTTCGTCCTTGTTCGAAGACCCTAGCCACGACCAGAACCTAACCCCTGTCACGGAAGACTCTAATGTTGCGAAGCGGGCCCGTTCGTCCTTGCCCTCTGAAGACCCTGATATCCAGGGCGGCAAGTACCAGGACCGGGACTCAGACCCGGACCCCTCGAAGCCCTTAAAACCAGTAAGCCTTACGCTGAAGGAGATTCTCGATGAGTCCGGCCCGTTCATCTCTAAAGAGCAAGAGCTCGAGTATGCTATGCTTTTTGCTAAGTGGAAGCAGGCCGAACCTATTACCAATCGCGTGATGGCCTCCATCTCGGAGTTTGGTGGACGCATTAACGTAGTACAGAGTTATGGTCCTCATACGCTACTTGAAGCCGCAGCTGCTGGCGCTAGCAAGAATCACGAGGTGGCCAACTGCCAACATATCTTCTTGAATAGTGATCAGGTCAAAAGTCAGTGGCAGAAGAAGACGCCAACACCAGTTTCTTCCTCCAAGATCGATTTCGGGCGCGTGTATAAAGCCATAGACAAGATCACCGGGGAGTTCGTCGCCATCAAAGAGTTGAAGCACTTCTGTAAGTCTTCGTATCTAGAGCTACCAGAAGTGCAGGCACTGACTAAGTTGAAGCACCCAAACATTGTCAACCTCAAGGGAGTCCAGAGGCAACACGGCGTCGTCTTTTTCATCTTTGAATACATGCAAGGTAGCCTGTCCCAACTCATTCACCTCAAGCAAAGCGCTGGGCAGCTTTTCTCCGAAGCCGAAATTCGAGCCATGTGTTTCCCGGTCTTCCAAGGCCTTGTATTTATGCATGTCCAACATGGCTACATCCACCGAGACCTGAAGCCGGACAACTTGTTGGTGAACCAAGGTGTGATCAAGATTTCGGATCTTGGTGCTGCAAGGGAGATCAACTCCGGCCCACCATTCAGTGATTACATCACCACACGGTGGTACAGAGCTCCTGAGATGCTGCTAGACTCTTTTATCTACAACGAAAAGGTTGACATGTGGGCAATGGGAGCGATCATGGCGGAGTTGTTTCTCATGCACCCTCTGTTTCCAGGTTCGAGTTCGCCAGATCAGATGTATCAGATTTGTAGAGTCATTGGGGCTCCAACGAGGAATACATGGAGGGAGGGATGTCTTCTTGCAAACCATATGAACTATGAATTTCCGCAGATTGATAGCCTTGGTCTTAGAGCAGTAATGCCGACATGGGTTAGTGAATCTGCAGTAGAGCTCATCGGGTCGCTTTGCTCTTGGGACCCTTTGAAGAGGCCAACAGCTGCACAAGCTCTTCACCATCCTTTCTTCACTGGAGGCTACAGAGATTCAGCTTCTACTAATTACTCAGCTAACAACGTTGGAAATGTAAGCTGCCTGCAGCAGCCTATTCTAGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

596

Amino Acids

66.38

Weight (kDa)

6.21

Isoelectric Point (pI)

49.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 294 - 477 2.6e-26 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 295 - 566 6e-58 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000445)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G19110 AT4G19110 AT4G19110 AT5G45430 AT5G45430
fragaria_vesca FvH4_2g16890 FvH4_5g19220 FvH4_5g19340 FvH4_5g19350 FvH4_5g19360 FvH4_5g23910 FvH4_7g27810
malus_domestica MD00G1001400.v1.1 MD04G1058900.v1.1 MD04G1059300.v1.1 MD04G1059500.v1.1 MD04G1059600.v1.1 MD04G1059800.v1.1 MD04G1061700.v1.1 MD04G1061800.v1.1 MD06G1014800.v1.1 MD06G1052900.v1.1 MD06G1055500.v1.1
prunus_persica Prupe.5G021300_v2.0.a1 Prupe.5G065900_v2.0.a1 Prupe.5G066500_v2.0.a1
pyrus_communis pycom06g04440
rosa_chinensis RchiOBHm_Chr1g0374681 RchiOBHm_Chr2g0120471 RchiOBHm_Chr2g0120711 RchiOBHm_Chr7g0203821 RchiOBHm_Chr7g0203861 RchiOBHm_Chr7g0208401 RchiOBHm_Chr7g0209011 RchiOBHm_Chr7g0213341
rosa_laevigata RLG00000001348 RLG00000002813 RLG00000003173 RLG00000003212 RLG00000003503 RLG00000022835 RLG00000026723 RLG00000035532
rosa_multiflora Rmu_co7960007.1_g000001 Rmu_co7963796.1_g000001 Rmu_co8519951.1_g000002 Rmu_sc0002038.1_g000009 Rmu_sc0004947.1_g000015 Rmu_sc0007490.1_g000005 Rmu_sc0011180.1_g000003 Rmu_sc0015273.1_g000013 Rmu_ssc0000190.1_g000014 Rmu_ssc0000372.1_g000031
rosa_roxburghii Rroxscaffold_3G00246080 Rroxscaffold_3G00249860 Rroxscaffold_3G00249870 Rroxscaffold_3G00253500 Rroxscaffold_4G00283340
rosa_rugosa Rorug01G0384300 Rorug07G0079000 Rorug07G0079000 Rorug07G0079000 Rorug07G0108300 Rorug07G0141200
rosa_samantha Rh1AG395700 Rh1BG359900 Rh1DG006600 Rh1DG390900 Rh2AG287100 Rh3BG335800 Rh3CG321100 Rh5DG116800 Rh7AG273000 Rh7BG207600 Rh7BG207800 Rh7BG237700 Rh7BG268400 Rh7CG221100 Rh7CG221300 Rh7CG254000 Rh7CG257900 Rh7CG292200 Rh7DG215700 Rh7DG215900 Rh7DG244500 Rh7DG249800 Rh7DG280700
rosa_wichuraiana Rw0G010370 Rw1G035090 Rw2G023020 Rw7G018200 Rw7G020570 Rw7G023690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 257, 302
AccB1I GGYRCC 1 cut(s) 381
AccB7I CCANNNNNTGG 2 cut(s) 163, 1332
AccI GTMKAC 1 cut(s) 42
AccII CGCG 3 cut(s) 281, 678, 891
AclI AACGTT 1 cut(s) 1746
AclWI GGATC 2 cut(s) 154, 1278
AcoI YGGCCR 3 cut(s) 313, 342, 789
AcsI RAATTY 2 cut(s) 1146, 1553
AcuI CTGAAG 7 cut(s) 194, 222, 312, 395, 504, 593, 1244
AcyI GRCGYC 2 cut(s) 851, 1053
AdeI CACNNNGTG 2 cut(s) 787, 1332
AfaI GTAC 3 cut(s) 512, 723, 1337
AfeI AGCGCT 1 cut(s) 1120
AflIII ACRYGT 1 cut(s) 1389
AgsI TTSAA 7 cut(s) 18, 752, 814, 946, 1006, 1073, 1657
AjnI CCWGG 7 cut(s) 141, 162, 213, 339, 498, 513, 1444
AjuI GAANNNNNNNTTGG 4 cut(s) 847, 866, 879, 898
Alw21I GWGCWC 3 cut(s) 624, 1345, 1626
Alw26I GTCTC 1 cut(s) 1212
AlwI GGATC 2 cut(s) 154, 1278
AlwNI CAGNNNCTG 3 cut(s) 163, 764, 994
Ama87I CYCGRG 2 cut(s) 307, 623
Aor51HI AGCGCT 1 cut(s) 1120
ApaI GGGCCC 1 cut(s) 466
ApoI RAATTY 2 cut(s) 1146, 1553
AseI ATTAAT 1 cut(s) 54
Asp700I GAANNNNTTC 1 cut(s) 950
AspLEI GCGC 3 cut(s) 770, 891, 1121
AsuC2I CCSGG 9 cut(s) 269, 308, 309, 329, 335, 521, 533, 919, 1166
AsuHPI GGTGA 6 cut(s) 158, 907, 1097, 1255, 1315, 1676
AsuII TTCGAA 1 cut(s) 399
AsuNHI GCTAGC 1 cut(s) 770
AvaI CYCGRG 2 cut(s) 307, 623
BaeGI GKGCMC 1 cut(s) 466
BalI TGGCCA 2 cut(s) 344, 791
BanI GGYRCC 1 cut(s) 381
BanII GRGCYC 5 cut(s) 466, 624, 1345, 1498, 1626
BauI CACGAG 1 cut(s) 782
Bbv12I GWGCWC 3 cut(s) 624, 1345, 1626
BccI CCATC 4 cut(s) 676, 698, 941, 1695
BceAI ACGGC 3 cut(s) 122, 280, 1066
BciT130I CCWGG 7 cut(s) 143, 164, 215, 341, 500, 515, 1446
BclI TGATCA 2 cut(s) 820, 1257
BcnI CCSGG 9 cut(s) 269, 308, 309, 329, 335, 521, 533, 919, 1166
BcoDI GTCTC 1 cut(s) 1212
BfaI CTAG 8 cut(s) 26, 210, 408, 771, 971, 1358, 1781, 1786
BfmI CTRYAG 3 cut(s) 1614, 1708, 1766
BfoI RGCGCY 2 cut(s) 771, 1122
BmeT110I CYCGRG 2 cut(s) 307, 623
BmiI GGNNCC 9 cut(s) 6, 182, 333, 383, 464, 537, 1497, 1649, 1650
BmsI GCATC 3 cut(s) 104, 273, 1341
BmtI GCTAGC 1 cut(s) 774
BplI GAGNNNNNCTC 2 cut(s) 1280, 1312
BpmI CTGGAG 1 cut(s) 1722
Bpu14I TTCGAA 1 cut(s) 399
BpuEI CTTGAG 2 cut(s) 1013, 1094
BpuMI CCSGG 9 cut(s) 269, 308, 309, 329, 335, 521, 533, 919, 1166
Bsa29I ATCGAT 1 cut(s) 879
BsaHI GRCGYC 2 cut(s) 851, 1053
BsaI GGTCTC 1 cut(s) 1212
BsaJI CCNNGG 9 cut(s) 142, 151, 262, 307, 499, 918, 1174, 1249, 1573
Bse118I RCCGGY 1 cut(s) 130
Bse1I ACTGG 3 cut(s) 557, 860, 1705
Bse3DI GCAATG 1 cut(s) 1404
BseBI CCWGG 7 cut(s) 143, 164, 215, 341, 500, 515, 1446
BseCI ATCGAT 1 cut(s) 879
BseDI CCNNGG 9 cut(s) 142, 151, 262, 307, 499, 918, 1174, 1249, 1573
BseGI GGATG 3 cut(s) 1209, 1529, 1687
BseMI GCAATG 1 cut(s) 1404
BseMII CTCAG 3 cut(s) 540, 1338, 1749
BseNI ACTGG 3 cut(s) 557, 860, 1705
BseSI GKGCMC 1 cut(s) 466
BseYI CCCAGC 1 cut(s) 1121
BsgI GTGCAG 2 cut(s) 1007, 1656
Bsh1236I CGCG 3 cut(s) 281, 678, 891
BshNI GGYRCC 1 cut(s) 381
BshVI ATCGAT 1 cut(s) 879
BsiHKAI GWGCWC 3 cut(s) 624, 1345, 1626
BsiHKCI CYCGRG 2 cut(s) 307, 623
BslFI GGGAC 6 cut(s) 108, 166, 290, 536, 1078, 1661
BsmAI GTCTC 1 cut(s) 1212
BsmFI GGGAC 6 cut(s) 108, 166, 290, 536, 1078, 1661
Bso31I GGTCTC 1 cut(s) 1212
BsoBI CYCGRG 2 cut(s) 307, 623
Bsp119I TTCGAA 1 cut(s) 399
Bsp120I GGGCCC 1 cut(s) 462
Bsp1286I GDGCHC 5 cut(s) 466, 624, 1345, 1498, 1626
BspCNI CTCAG 3 cut(s) 539, 1339, 1748
BspDI ATCGAT 1 cut(s) 879
BspFNI CGCG 3 cut(s) 281, 678, 891
BspLI GGNNCC 9 cut(s) 6, 182, 333, 383, 464, 537, 1497, 1649, 1650
BspMAI CTGCAG 2 cut(s) 1618, 1770
BspOI GCTAGC 1 cut(s) 774
BspPI GGATC 2 cut(s) 154, 1278
BspQI GCTCTTC 1 cut(s) 1686
BspT104I TTCGAA 1 cut(s) 399
BspT107I GGYRCC 1 cut(s) 381
BspTNI GGTCTC 1 cut(s) 1212
BsrDI GCAATG 1 cut(s) 1404
BsrFI RCCGGY 1 cut(s) 130
BsrI ACTGG 3 cut(s) 557, 860, 1705
BssAI RCCGGY 1 cut(s) 130
BssECI CCNNGG 9 cut(s) 142, 151, 262, 307, 499, 918, 1174, 1249, 1573
BssNI GRCGYC 2 cut(s) 851, 1053
BssSI CACGAG 1 cut(s) 782
BssT1I CCWWGG 4 cut(s) 151, 1174, 1249, 1573
Bst2BI CACGAG 1 cut(s) 782
Bst2UI CCWGG 7 cut(s) 143, 164, 215, 341, 500, 515, 1446
Bst4CI ACNGT 2 cut(s) 386, 1332
Bst6I CTCTTC 2 cut(s) 1652, 1686
BstACI GRCGYC 2 cut(s) 851, 1053
BstBI TTCGAA 1 cut(s) 399
BstC8I GCNNGC 9 cut(s) 132, 279, 317, 462, 657, 766, 772, 990, 1766
BstDEI CTNAG 6 cut(s) 526, 645, 999, 1347, 1580, 1735
BstDSI CCRYGG 1 cut(s) 262
BstEII GGTNACC 1 cut(s) 146
BstF5I GGATG 3 cut(s) 1209, 1529, 1687
BstFNI CGCG 3 cut(s) 281, 678, 891
BstH2I RGCGCY 2 cut(s) 771, 1122
BstHHI GCGC 3 cut(s) 770, 891, 1121
BstMAI GTCTC 1 cut(s) 1212
BstMWI GCNNNNNNNGC 7 cut(s) 283, 461, 761, 767, 1403, 1412, 1676
BstNI CCWGG 7 cut(s) 143, 164, 215, 341, 500, 515, 1446
BstNSI RCATGY 3 cut(s) 1081, 1196, 1393
BstPI GGTNACC 1 cut(s) 146
BstSFI CTRYAG 3 cut(s) 1614, 1708, 1766
BstSLI GKGCMC 1 cut(s) 466
BstUI CGCG 3 cut(s) 281, 678, 891
BstX2I RGATCY 2 cut(s) 159, 1270
BstYI RGATCY 2 cut(s) 159, 1270
Bsu15I ATCGAT 1 cut(s) 879
BsuTUI ATCGAT 1 cut(s) 879
BtgI CCRYGG 1 cut(s) 262
BtgZI GCGATG 2 cut(s) 127, 296
BtsCI GGATG 3 cut(s) 1209, 1529, 1687
BtsIMutI CAGTG 4 cut(s) 842, 992, 1318, 1698
Cac8I GCNNGC 9 cut(s) 132, 279, 317, 462, 657, 766, 772, 990, 1766
CaiI CAGNNNCTG 3 cut(s) 163, 764, 994
CfoI GCGC 3 cut(s) 770, 891, 1121
Cfr10I RCCGGY 1 cut(s) 130
Cfr9I CCCGGG 1 cut(s) 307
ClaI ATCGAT 1 cut(s) 879
CseI GACGC 3 cut(s) 717, 859, 1042
Csp6I GTAC 3 cut(s) 511, 722, 1336
CviQI GTAC 3 cut(s) 511, 722, 1336
DdeI CTNAG 6 cut(s) 526, 645, 999, 1347, 1580, 1735
DraIII CACNNNGTG 2 cut(s) 787, 1332
DrdI GACNNNNNNGTC 2 cut(s) 257, 302
DseDI GACNNNNNNGTC 2 cut(s) 257, 302
EaeI YGGCCR 3 cut(s) 313, 342, 789
Eam1104I CTCTTC 2 cut(s) 1652, 1686
EarI CTCTTC 2 cut(s) 1652, 1686
EciI GGCGGA 2 cut(s) 158, 1430
Ecl136II GAGCTC 3 cut(s) 622, 1343, 1624
Eco130I CCWWGG 4 cut(s) 151, 1174, 1249, 1573
Eco147I AGGCCT 1 cut(s) 1179
Eco24I GRGCYC 5 cut(s) 466, 624, 1345, 1498, 1626
Eco31I GGTCTC 1 cut(s) 1212
Eco32I GATATC 1 cut(s) 496
Eco47III AGCGCT 1 cut(s) 1120
Eco53kI GAGCTC 3 cut(s) 622, 1343, 1624
Eco57I CTGAAG 7 cut(s) 194, 222, 312, 395, 504, 593, 1244
Eco88I CYCGRG 2 cut(s) 307, 623
Eco91I GGTNACC 1 cut(s) 146
EcoICRI GAGCTC 3 cut(s) 622, 1343, 1624
EcoO109I RGGNCCY 1 cut(s) 1648
EcoO65I GGTNACC 1 cut(s) 146
EcoRII CCWGG 7 cut(s) 141, 162, 213, 339, 498, 513, 1444
EcoRV GATATC 1 cut(s) 496
EcoT14I CCWWGG 4 cut(s) 151, 1174, 1249, 1573
EcoT22I ATGCAT 1 cut(s) 1194
EcoT38I GRGCYC 5 cut(s) 466, 624, 1345, 1498, 1626
ErhI CCWWGG 4 cut(s) 151, 1174, 1249, 1573
FaqI GGGAC 6 cut(s) 108, 166, 290, 536, 1078, 1661
FauI CCCGC 2 cut(s) 286, 453
FauNDI CATATG 1 cut(s) 1542
FbaI TGATCA 2 cut(s) 820, 1257
FblI GTMKAC 1 cut(s) 42
FokI GGATG 3 cut(s) 1196, 1536, 1674
FriOI GRGCYC 5 cut(s) 466, 624, 1345, 1498, 1626
FspBI CTAG 8 cut(s) 26, 210, 408, 771, 971, 1358, 1781, 1786
GlaI GCGC 3 cut(s) 769, 890, 1120
GsaI CCCAGC 1 cut(s) 1125
GsuI CTGGAG 1 cut(s) 1722
HaeII RGCGCY 2 cut(s) 771, 1122
HgaI GACGC 3 cut(s) 717, 859, 1042
HhaI GCGC 3 cut(s) 770, 891, 1121
Hin1I GRCGYC 2 cut(s) 851, 1053
Hin6I GCGC 3 cut(s) 768, 889, 1119
HinP1I GCGC 3 cut(s) 768, 889, 1119
HincII GTYRAC 2 cut(s) 1024, 1387
HindII GTYRAC 2 cut(s) 1024, 1387
HphI GGTGA 6 cut(s) 158, 907, 1097, 1255, 1315, 1676
Hpy166II GTNNAC 6 cut(s) 43, 262, 707, 1024, 1246, 1387
Hpy188I TCNGA 9 cut(s) 202, 292, 484, 529, 697, 1138, 1270, 1467, 1476
Hpy188III TCNNGA 7 cut(s) 584, 782, 811, 971, 1039, 1261, 1346
Hpy8I GTNNAC 6 cut(s) 43, 262, 707, 1024, 1246, 1387
Hpy99I CGWCG 2 cut(s) 932, 1058
HpyAV CCTTC 2 cut(s) 18, 568
HpyCH4III ACNGT 2 cut(s) 386, 1332
HpyCH4IV ACGT 2 cut(s) 717, 1746
HpyF10VI GCNNNNNNNGC 7 cut(s) 283, 461, 761, 767, 1403, 1412, 1676
HpyF3I CTNAG 6 cut(s) 526, 645, 999, 1347, 1580, 1735
HpySE526I ACGT 2 cut(s) 717, 1746
Hsp92I GRCGYC 2 cut(s) 851, 1053
HspAI GCGC 3 cut(s) 768, 889, 1119
KflI GGGWCCC 1 cut(s) 1648
KroI GCCGGC 1 cut(s) 130
KroNI GCCGGC 1 cut(s) 132
Ksp22I TGATCA 2 cut(s) 820, 1257
LguI GCTCTTC 1 cut(s) 1686
LmnI GCTCC 3 cut(s) 1348, 1403, 1501
LweI GCATC 3 cut(s) 104, 273, 1341
MaeI CTAG 8 cut(s) 26, 210, 408, 771, 971, 1358, 1781, 1786
MaeII ACGT 2 cut(s) 717, 1746
MaeIII GTNAC 4 cut(s) 28, 146, 241, 433
MflI RGATCY 2 cut(s) 159, 1270
MhlI GDGCHC 5 cut(s) 466, 624, 1345, 1498, 1626
MlsI TGGCCA 2 cut(s) 344, 791
MluCI AATT 4 cut(s) 18, 1146, 1553, 1729
MluNI TGGCCA 2 cut(s) 344, 791
MlyI GAGTC 6 cut(s) 437, 518, 599, 1044, 1355, 1494
MmeI TCCRAC 3 cut(s) 1222, 1523, 1729
Mox20I TGGCCA 2 cut(s) 344, 791
Mph1103I ATGCAT 1 cut(s) 1194
MroNI GCCGGC 1 cut(s) 130
MroXI GAANNNNTTC 1 cut(s) 950
MscI TGGCCA 2 cut(s) 344, 791
MseI TTAA 3 cut(s) 54, 551, 714
Msp20I TGGCCA 2 cut(s) 344, 791
MspA1I CMGCKG 3 cut(s) 239, 761, 1670
MvaI CCWGG 7 cut(s) 143, 164, 215, 341, 500, 515, 1446
MvnI CGCG 3 cut(s) 281, 678, 891
MwoI GCNNNNNNNGC 7 cut(s) 283, 461, 761, 767, 1403, 1412, 1676
NaeI GCCGGC 1 cut(s) 132
NciI CCSGG 9 cut(s) 269, 308, 309, 329, 335, 521, 533, 919, 1166
NdeI CATATG 1 cut(s) 1542
NgoMIV GCCGGC 1 cut(s) 130
NheI GCTAGC 1 cut(s) 770
NlaIV GGNNCC 9 cut(s) 6, 182, 333, 383, 464, 537, 1497, 1649, 1650
NmuCI GTSAC 2 cut(s) 146, 433
NsiI ATGCAT 1 cut(s) 1194
NspI RCATGY 3 cut(s) 1081, 1196, 1393
NspV TTCGAA 1 cut(s) 399
PaeR7I CTCGAG 1 cut(s) 623
PceI AGGCCT 1 cut(s) 1179
PciI ACATGT 1 cut(s) 1389
PciSI GCTCTTC 1 cut(s) 1686
PdiI GCCGGC 1 cut(s) 132
PdmI GAANNNNTTC 1 cut(s) 950
PfeI GAWTC 4 cut(s) 580, 778, 1610, 1715
PflMI CCANNNNNTGG 2 cut(s) 163, 1332
PleI GAGTC 6 cut(s) 437, 518, 598, 1043, 1355, 1493
PpsI GAGTC 6 cut(s) 437, 518, 598, 1043, 1355, 1493
PpuMI RGGWCCY 1 cut(s) 1648
PscI ACATGT 1 cut(s) 1389
PshBI ATTAAT 1 cut(s) 54
Psp124BI GAGCTC 3 cut(s) 624, 1345, 1626
Psp1406I AACGTT 1 cut(s) 1746
Psp5II RGGWCCY 1 cut(s) 1648
Psp6I CCWGG 7 cut(s) 141, 162, 213, 339, 498, 513, 1444
PspEI GGTNACC 1 cut(s) 146
PspFI CCCAGC 1 cut(s) 1121
PspGI CCWGG 7 cut(s) 141, 162, 213, 339, 498, 513, 1444
PspN4I GGNNCC 9 cut(s) 6, 182, 333, 383, 464, 537, 1497, 1649, 1650
PspOMI GGGCCC 1 cut(s) 462
PspPPI RGGWCCY 1 cut(s) 1648
PspXI VCTCGAGB 1 cut(s) 623
PstI CTGCAG 2 cut(s) 1618, 1770
PstNI CAGNNNCTG 3 cut(s) 163, 764, 994
PsuI RGATCY 2 cut(s) 159, 1270
PvuII CAGCTG 2 cut(s) 761, 1670
RsaI GTAC 3 cut(s) 512, 723, 1337
RsaNI GTAC 3 cut(s) 511, 722, 1336
SacI GAGCTC 3 cut(s) 624, 1345, 1626
SapI GCTCTTC 1 cut(s) 1686
SaqAI TTAA 3 cut(s) 54, 551, 714
SchI GAGTC 6 cut(s) 437, 518, 599, 1044, 1355, 1494
SduI GDGCHC 5 cut(s) 466, 624, 1345, 1498, 1626
SfaNI GCATC 3 cut(s) 104, 273, 1341
SfcI CTRYAG 3 cut(s) 1614, 1708, 1766
Sfr274I CTCGAG 1 cut(s) 623
SfuI TTCGAA 1 cut(s) 399
SlaI CTCGAG 1 cut(s) 623
SmaI CCCGGG 1 cut(s) 309
SmlI CTYRAG 3 cut(s) 623, 1028, 1109
SmoI CTYRAG 3 cut(s) 623, 1028, 1109
Sse9I AATT 4 cut(s) 18, 1146, 1553, 1729
SseBI AGGCCT 1 cut(s) 1179
SspMI CTAG 8 cut(s) 26, 210, 408, 771, 971, 1358, 1781, 1786
SstI GAGCTC 3 cut(s) 624, 1345, 1626
StuI AGGCCT 1 cut(s) 1179
StyI CCWWGG 4 cut(s) 151, 1174, 1249, 1573
TaaI ACNGT 2 cut(s) 386, 1332
TaiI ACGT 2 cut(s) 720, 1749
TaqI TCGA 8 cut(s) 95, 399, 542, 585, 624, 879, 1150, 1451
TasI AATT 4 cut(s) 18, 1146, 1553, 1729
TatI WGTACW 1 cut(s) 721
TauI GCSGC 4 cut(s) 315, 382, 507, 758
TfiI GAWTC 4 cut(s) 580, 778, 1610, 1715
Tru1I TTAA 3 cut(s) 54, 551, 714
Tru9I TTAA 3 cut(s) 54, 551, 714
TscAI CASTG 4 cut(s) 842, 999, 1318, 1705
TseFI GTSAC 2 cut(s) 146, 433
Tsp45I GTSAC 2 cut(s) 146, 433
TspDTI ATGAA 4 cut(s) 592, 1054, 1559, 1566
TspGWI ACGGA 2 cut(s) 260, 452
TspMI CCCGGG 1 cut(s) 307
TspRI CASTG 4 cut(s) 842, 999, 1318, 1705
Van91I CCANNNNNTGG 2 cut(s) 163, 1332
VspI ATTAAT 1 cut(s) 54
XapI RAATTY 2 cut(s) 1146, 1553
XbaI TCTAGA 1 cut(s) 970
XceI RCATGY 3 cut(s) 1081, 1196, 1393
XcmI CCANNNNNNNNNTGG 1 cut(s) 679
XhoI CTCGAG 1 cut(s) 623
XmaI CCCGGG 1 cut(s) 307
XmiI GTMKAC 1 cut(s) 42
XmnI GAANNNNTTC 1 cut(s) 950
XspI CTAG 8 cut(s) 26, 210, 408, 771, 971, 1358, 1781, 1786
Zsp2I ATGCAT 1 cut(s) 1194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.